View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2336_low_58 (Length: 243)
Name: NF2336_low_58
Description: NF2336
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2336_low_58 |
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Alignment Details
Target: chr3 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 40282945 - 40283156
Alignment:
| Q |
1 |
ctgaacagtaaactataaagtaaattaattaattattaagatagtcataaagcaaatctatgtgtatattcaggcaccctagaccaattgtttgttattc |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
40282945 |
ctgaacagtaaactataaagtaaattaattaattattaagatagtcataaagcaaatctatgtgtatattcaggcaccctagaccaattgtttgtcattc |
40283044 |
T |
|
| Q |
101 |
ctaatcatcgttggtgccttgtgagagacaccattactcagcaccatgtgttatattcacttcctctgctatcacaaatagaacagtatttttaaagtag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40283045 |
ctaatcatcgttggtgccttgtgagagacaccattactcagcaccatgtgttatattcacttcctctgctatcacaaatagaacagtatttttaaagtag |
40283144 |
T |
|
| Q |
201 |
ttagcatgaaat |
212 |
Q |
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||| |||||||| |
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| T |
40283145 |
ttaacatgaaat |
40283156 |
T |
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