View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2337-Insertion-1 (Length: 968)

Name: NF2337-Insertion-1
Description: NF2337
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2337-Insertion-1
NF2337-Insertion-1
[»] chr3 (60 HSPs)
chr3 (544-968)||(5321526-5321957)
chr3 (7-478)||(5320885-5321345)
chr3 (562-671)||(10453710-10453826)
chr3 (562-651)||(34715462-34715558)
chr3 (562-651)||(3985774-3985870)
chr3 (562-651)||(21750476-21750572)
chr3 (562-651)||(44573327-44573423)
chr3 (562-650)||(11244548-11244643)
chr3 (567-651)||(27219330-27219421)
chr3 (565-620)||(39956477-39956532)
chr3 (562-620)||(9178946-9179004)
chr3 (562-620)||(11414402-11414460)
chr3 (562-651)||(13769298-13769394)
chr3 (562-651)||(14170006-14170102)
chr3 (562-620)||(35011696-35011754)
chr3 (562-620)||(35011903-35011961)
chr3 (554-651)||(43101370-43101474)
chr3 (562-620)||(44573678-44573736)
chr3 (562-620)||(44573975-44574033)
chr3 (562-620)||(50203864-50203922)
chr3 (562-650)||(15820612-15820707)
chr3 (562-650)||(48511646-48511741)
chr3 (562-644)||(49477542-49477631)
chr3 (562-620)||(4191129-4191187)
chr3 (562-620)||(19820535-19820593)
chr3 (562-620)||(22407448-22407506)
chr3 (562-620)||(22407655-22407713)
chr3 (562-620)||(39078778-39078836)
chr3 (562-620)||(39956681-39956739)
chr3 (562-620)||(44461074-44461132)
chr3 (562-651)||(45443281-45443377)
chr3 (562-616)||(50057072-50057126)
chr3 (562-620)||(50692362-50692420)
chr3 (562-620)||(50692565-50692623)
chr3 (625-671)||(51734634-51734680)
chr3 (562-620)||(53761405-53761463)
chr3 (562-650)||(9179135-9179230)
chr3 (562-650)||(10856633-10856728)
chr3 (562-619)||(31563706-31563763)
chr3 (562-619)||(34356849-34356906)
chr3 (562-619)||(38300290-38300347)
chr3 (562-619)||(38300759-38300816)
chr3 (556-620)||(29763697-29763761)
chr3 (569-644)||(54495539-54495621)
chr3 (562-644)||(9264093-9264182)
chr3 (554-617)||(35015527-35015590)
chr3 (562-617)||(49477369-49477424)
chr3 (562-644)||(51642642-51642731)
chr3 (562-620)||(9264300-9264358)
chr3 (629-671)||(10453966-10454008)
chr3 (562-620)||(21832698-21832756)
chr3 (562-620)||(22339780-22339838)
chr3 (562-620)||(33909840-33909898)
chr3 (570-620)||(44461327-44461377)
chr3 (554-620)||(50338381-50338447)
chr3 (562-620)||(51338448-51338506)
chr3 (562-620)||(51642435-51642493)
chr3 (562-611)||(24539202-24539251)
chr3 (562-619)||(31564010-31564067)
chr3 (562-619)||(40230646-40230703)
[»] chr7 (46 HSPs)
chr7 (553-676)||(43384278-43384408)
chr7 (562-651)||(257274-257370)
chr7 (555-673)||(36092599-36092724)
chr7 (562-651)||(1661198-1661294)
chr7 (562-651)||(37272052-37272148)
chr7 (562-651)||(43167900-43167996)
chr7 (562-651)||(1663611-1663708)
chr7 (562-651)||(7135250-7135346)
chr7 (570-620)||(14691111-14691161)
chr7 (562-620)||(28910071-28910129)
chr7 (562-620)||(34590567-34590625)
chr7 (557-650)||(34748780-34748880)
chr7 (562-671)||(36092399-36092515)
chr7 (562-620)||(40137703-40137761)
chr7 (562-620)||(44760514-44760572)
chr7 (562-650)||(27585258-27585353)
chr7 (555-620)||(31374804-31374869)
chr7 (562-650)||(36270477-36270572)
chr7 (562-650)||(39549985-39550080)
chr7 (562-619)||(48116303-48116360)
chr7 (565-617)||(36492553-36492605)
chr7 (562-617)||(33855733-33855788)
chr7 (562-620)||(6783077-6783135)
chr7 (562-620)||(12524576-12524634)
chr7 (562-620)||(29780186-29780244)
chr7 (562-651)||(37530930-37531026)
chr7 (562-620)||(39808604-39808662)
chr7 (562-651)||(40121625-40121721)
chr7 (562-620)||(43288571-43288629)
chr7 (562-619)||(40703418-40703475)
chr7 (562-615)||(40703659-40703712)
chr7 (562-650)||(47346101-47346196)
chr7 (562-650)||(47346330-47346425)
chr7 (564-620)||(36237841-36237897)
chr7 (564-620)||(36238044-36238100)
chr7 (571-621)||(2179693-2179743)
chr7 (562-620)||(4258007-4258065)
chr7 (554-620)||(9378832-9378898)
chr7 (562-620)||(12525172-12525230)
chr7 (562-620)||(16564933-16564991)
chr7 (562-620)||(16600671-16600729)
chr7 (562-620)||(33909345-33909403)
chr7 (562-620)||(39808471-39808529)
chr7 (562-619)||(13310432-13310489)
chr7 (622-671)||(14742689-14742737)
chr7 (562-619)||(40703866-40703923)
[»] chr1 (45 HSPs)
chr1 (562-651)||(4022132-4022228)
chr1 (554-651)||(17419788-17419892)
chr1 (554-651)||(2697330-2697434)
chr1 (562-651)||(19937050-19937146)
chr1 (562-620)||(29413387-29413445)
chr1 (562-651)||(43423280-43423376)
chr1 (554-651)||(8520092-8520196)
chr1 (562-651)||(31305712-31305808)
chr1 (562-650)||(38474285-38474380)
chr1 (562-671)||(18585018-18585135)
chr1 (554-617)||(27957808-27957871)
chr1 (562-651)||(29383630-29383726)
chr1 (562-620)||(37600911-37600969)
chr1 (562-650)||(12287850-12287945)
chr1 (562-650)||(17294980-17295075)
chr1 (562-619)||(20735795-20735852)
chr1 (555-620)||(43361552-43361617)
chr1 (562-673)||(45858633-45858752)
chr1 (562-644)||(39649091-39649180)
chr1 (562-651)||(2104267-2104363)
chr1 (562-620)||(20735561-20735619)
chr1 (562-620)||(33879785-33879843)
chr1 (562-620)||(33964412-33964470)
chr1 (562-620)||(36332151-36332209)
chr1 (554-620)||(40664249-40664315)
chr1 (562-620)||(45403479-45403537)
chr1 (562-619)||(463090-463147)
chr1 (562-643)||(6237976-6238056)
chr1 (562-619)||(11149430-11149487)
chr1 (563-620)||(15391858-15391915)
chr1 (562-619)||(21638273-21638330)
chr1 (562-650)||(29228450-29228545)
chr1 (567-620)||(36326945-36326998)
chr1 (564-620)||(27958056-27958112)
chr1 (556-620)||(43361758-43361822)
chr1 (562-644)||(52846856-52846945)
chr1 (554-620)||(24131880-24131946)
chr1 (562-620)||(29273232-29273290)
chr1 (554-619)||(1233966-1234031)
chr1 (563-620)||(12233322-12233379)
chr1 (622-651)||(20208156-20208185)
chr1 (622-651)||(20208455-20208484)
chr1 (565-614)||(21538827-21538876)
chr1 (562-619)||(22892440-22892497)
chr1 (562-615)||(22892695-22892748)
[»] chr2 (40 HSPs)
chr2 (562-648)||(42768341-42768432)
chr2 (562-651)||(3976478-3976574)
chr2 (554-651)||(6183365-6183469)
chr2 (561-651)||(21213891-21213988)
chr2 (553-651)||(43169243-43169348)
chr2 (554-620)||(10429778-10429844)
chr2 (562-651)||(11969053-11969149)
chr2 (564-651)||(18901873-18901967)
chr2 (562-649)||(43195787-43195881)
chr2 (565-620)||(7877883-7877938)
chr2 (562-651)||(3977010-3977106)
chr2 (557-650)||(10862060-10862160)
chr2 (562-620)||(21214208-21214266)
chr2 (562-651)||(23054327-23054423)
chr2 (562-651)||(25441697-25441793)
chr2 (562-650)||(936814-936909)
chr2 (562-650)||(11349800-11349895)
chr2 (564-644)||(12431906-12431993)
chr2 (562-619)||(25286267-25286324)
chr2 (553-622)||(39108392-39108461)
chr2 (560-620)||(32975290-32975350)
chr2 (562-644)||(883608-883697)
chr2 (562-620)||(8044552-8044611)
chr2 (562-620)||(10542070-10542128)
chr2 (562-620)||(20998996-20999054)
chr2 (557-650)||(28193577-28193677)
chr2 (562-650)||(10862308-10862403)
chr2 (562-650)||(11350194-11350289)
chr2 (562-619)||(30156248-30156305)
chr2 (562-619)||(30160367-30160424)
chr2 (556-620)||(27545117-27545181)
chr2 (556-620)||(28895566-28895629)
chr2 (562-617)||(2333365-2333420)
chr2 (562-617)||(15061272-15061327)
chr2 (562-644)||(17727412-17727501)
chr2 (562-620)||(10849498-10849556)
chr2 (554-620)||(16007016-16007082)
chr2 (562-620)||(34775396-34775454)
chr2 (562-620)||(38760324-38760382)
chr2 (562-619)||(901963-902020)
[»] chr8 (35 HSPs)
chr8 (562-651)||(18905857-18905953)
chr8 (562-651)||(32931402-32931498)
chr8 (562-671)||(39588091-39588210)
chr8 (562-651)||(34248078-34248174)
chr8 (562-651)||(21085155-21085251)
chr8 (562-651)||(21653328-21653424)
chr8 (562-651)||(21653805-21653901)
chr8 (562-620)||(22277563-22277621)
chr8 (562-620)||(34248398-34248456)
chr8 (562-620)||(36997205-36997263)
chr8 (562-650)||(14019810-14019905)
chr8 (562-671)||(17607221-17607338)
chr8 (562-644)||(43599319-43599408)
chr8 (562-620)||(10989041-10989099)
chr8 (562-620)||(10989248-10989306)
chr8 (562-620)||(15011036-15011094)
chr8 (562-620)||(39124963-39125021)
chr8 (554-620)||(42228810-42228876)
chr8 (562-650)||(35908680-35908775)
chr8 (554-619)||(36037230-36037295)
chr8 (571-671)||(39587874-39587981)
chr8 (562-619)||(43984323-43984380)
chr8 (562-644)||(8559589-8559678)
chr8 (562-620)||(3183918-3183976)
chr8 (562-620)||(16454642-16454700)
chr8 (562-620)||(20298523-20298581)
chr8 (562-620)||(35561497-35561555)
chr8 (555-644)||(35561674-35561770)
chr8 (562-612)||(36993954-36994004)
chr8 (562-620)||(38287971-38288029)
chr8 (562-620)||(40902400-40902458)
chr8 (622-671)||(14582211-14582260)
chr8 (562-615)||(22451392-22451445)
chr8 (562-619)||(30176471-30176528)
chr8 (554-619)||(36039793-36039858)
[»] chr6 (29 HSPs)
chr6 (562-651)||(8144018-8144114)
chr6 (562-624)||(1744849-1744911)
chr6 (562-651)||(10418345-10418441)
chr6 (562-620)||(10733445-10733503)
chr6 (562-651)||(24055116-24055212)
chr6 (562-651)||(12134490-12134586)
chr6 (562-651)||(19054494-19054590)
chr6 (565-648)||(30539239-30539329)
chr6 (562-617)||(25999065-25999120)
chr6 (562-617)||(26098384-26098439)
chr6 (562-617)||(26098796-26098851)
chr6 (562-651)||(31880-31976)
chr6 (562-620)||(11313389-11313447)
chr6 (562-620)||(15101118-15101176)
chr6 (562-620)||(16877017-16877075)
chr6 (554-620)||(17096697-17096763)
chr6 (562-620)||(24558827-24558885)
chr6 (562-620)||(28149832-28149890)
chr6 (562-619)||(1469001-1469058)
chr6 (562-619)||(27914333-27914390)
chr6 (556-620)||(5269274-5269338)
chr6 (562-618)||(17147912-17147968)
chr6 (565-617)||(25998859-25998911)
chr6 (562-617)||(16876837-16876892)
chr6 (562-617)||(26098590-26098645)
chr6 (554-620)||(16590223-16590289)
chr6 (554-620)||(16605091-16605157)
chr6 (562-620)||(19712616-19712674)
chr6 (562-620)||(19753611-19753669)
[»] chr5 (42 HSPs)
chr5 (562-651)||(38131765-38131861)
chr5 (562-651)||(13843698-13843794)
chr5 (562-651)||(37995641-37995737)
chr5 (562-650)||(22196333-22196428)
chr5 (562-650)||(22196560-22196655)
chr5 (562-671)||(2471700-2471817)
chr5 (562-617)||(2716385-2716440)
chr5 (562-644)||(38376739-38376828)
chr5 (562-620)||(2716585-2716643)
chr5 (562-620)||(28358042-28358100)
chr5 (562-671)||(14769839-14769956)
chr5 (565-624)||(33040098-33040157)
chr5 (562-644)||(35526995-35527084)
chr5 (562-620)||(48111-48169)
chr5 (562-620)||(11632470-11632528)
chr5 (562-620)||(13413623-13413681)
chr5 (554-620)||(18107872-18107938)
chr5 (562-620)||(24918200-24918258)
chr5 (562-620)||(24994108-24994166)
chr5 (562-620)||(29432451-29432509)
chr5 (562-620)||(38663286-38663344)
chr5 (553-666)||(39668415-39668535)
chr5 (562-650)||(84041-84136)
chr5 (562-615)||(1892097-1892150)
chr5 (562-619)||(12965253-12965310)
chr5 (562-615)||(17016100-17016153)
chr5 (557-617)||(24792124-24792184)
chr5 (565-644)||(28156044-28156124)
chr5 (562-617)||(48318-48373)
chr5 (562-617)||(2908569-2908624)
chr5 (562-617)||(2908776-2908831)
chr5 (565-620)||(36878365-36878420)
chr5 (553-620)||(37656730-37656797)
chr5 (562-620)||(3762945-3763003)
chr5 (562-620)||(4465192-4465250)
chr5 (570-620)||(10668399-10668449)
chr5 (554-620)||(20720549-20720615)
chr5 (554-620)||(24125101-24125167)
chr5 (562-620)||(34457135-34457193)
chr5 (562-620)||(35527281-35527339)
chr5 (622-671)||(17584341-17584389)
chr5 (554-615)||(27760419-27760480)
[»] chr4 (49 HSPs)
chr4 (554-651)||(991205-991309)
chr4 (562-651)||(29669370-29669466)
chr4 (562-651)||(53740183-53740279)
chr4 (562-650)||(51470485-51470580)
chr4 (554-617)||(10390474-10390537)
chr4 (562-651)||(15665154-15665250)
chr4 (562-651)||(27048415-27048511)
chr4 (562-651)||(29669685-29669781)
chr4 (562-651)||(51469482-51469578)
chr4 (557-617)||(53863947-53864007)
chr4 (562-648)||(990551-990644)
chr4 (562-617)||(10390683-10390738)
chr4 (565-620)||(53738218-53738273)
chr4 (562-651)||(36558473-36558569)
chr4 (562-651)||(45426943-45427039)
chr4 (562-620)||(45427259-45427317)
chr4 (563-644)||(50307284-50307372)
chr4 (562-620)||(52214654-52214712)
chr4 (562-620)||(56511336-56511394)
chr4 (562-619)||(21497690-21497747)
chr4 (562-619)||(21498227-21498284)
chr4 (562-650)||(33912045-33912140)
chr4 (563-620)||(52827240-52827297)
chr4 (562-648)||(29734565-29734658)
chr4 (562-644)||(43943681-43943770)
chr4 (562-648)||(43972359-43972452)
chr4 (557-620)||(53386114-53386177)
chr4 (562-620)||(5488406-5488464)
chr4 (562-620)||(9938488-9938546)
chr4 (562-620)||(12016690-12016748)
chr4 (562-620)||(12016898-12016956)
chr4 (562-620)||(23018509-23018567)
chr4 (562-620)||(25753612-25753670)
chr4 (562-620)||(28085733-28085791)
chr4 (562-651)||(56509610-56509706)
chr4 (562-620)||(56511543-56511601)
chr4 (562-619)||(41176746-41176803)
chr4 (557-650)||(42901820-42901909)
chr4 (562-617)||(27048144-27048199)
chr4 (562-621)||(28395215-28395274)
chr4 (562-671)||(46528930-46529047)
chr4 (562-612)||(10390302-10390352)
chr4 (562-620)||(29113488-29113546)
chr4 (562-624)||(48843024-48843086)
chr4 (557-618)||(6778678-6778739)
chr4 (556-617)||(22865811-22865872)
chr4 (562-619)||(28245828-28245885)
chr4 (562-619)||(38908157-38908214)
chr4 (587-651)||(51564914-51564978)
[»] scaffold0785 (1 HSPs)
scaffold0785 (562-650)||(3127-3222)
[»] scaffold1138 (1 HSPs)
scaffold1138 (562-620)||(2086-2144)
[»] scaffold0166 (1 HSPs)
scaffold0166 (557-617)||(34507-34567)
[»] scaffold0029 (1 HSPs)
scaffold0029 (562-644)||(76860-76949)
[»] scaffold0434 (1 HSPs)
scaffold0434 (562-620)||(13345-13403)
[»] scaffold0419 (1 HSPs)
scaffold0419 (554-620)||(4238-4304)


Alignment Details
Target: chr3 (Bit Score: 351; Significance: 0; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 351; E-Value: 0
Query Start/End: Original strand, 544 - 968
Target Start/End: Original strand, 5321526 - 5321957
Alignment:
Q  544 tctaataccatggggtcaaactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgat 636  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||||||||||       ||||||||||||    
T  5321526 tctaataccatggggtcaaactcatccttacaaaattggctaataaggtgaggagtgt-tcctctttataaactcttttcaaaaatcctatctatccgat 5321624  T
Q  637 gtgggactaaatccatatagtgttggctgctaacataatcctcacctctggttaagttaggagtcttaggactgagttaggctcaatccaaattataaaa 736  Q
    ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  5321625 gtgggactaaatctacatagtgttggctgctaacataatcctcacctctggttaagttaggagtcttaggactgagttaggctcaatccaaattataata 5321724  T
Q  737 atagatacattcagagactattacagttgaaggactaaattgctataaactcttcatcttcactttacaaacaaccgtgattcatcttaacagtatggaa 836  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  5321725 atagatacattcagagactatcacagttcaaggactaaattgctataaactctttatcttcactttacaaacaaccgtgattcattttaacagtatggaa 5321824  T
Q  837 acaaccaacgaagaatttgaacaaataaattttaaaaattaagaaagaaaagagcacatacccatctctaaaatgccaccctgcaaggctggcagtttca 936  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  5321825 acaaccaacgaagaatttgaacaaataaattttaaaaattaagaaagaaaagagaacatacccatctctaaaatgccaccctgcaaggctggcagtttca 5321924  T
Q  937 tgtaaagctaacct-caactttgcacttcctcc 968  Q
    |||||||||||||| ||||||||||||||||||    
T  5321925 tgtaaagctaacctccaactttgcacttcctcc 5321957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 338; E-Value: 0
Query Start/End: Original strand, 7 - 478
Target Start/End: Original strand, 5320885 - 5321345
Alignment:
Q  7 aaactctacaaggctagcttgttataattaattgacttctaacagaaagtgaactaccaaacttcttacagaaaaattaactagcacaactaacttttaa 106  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  5320885 aaactctacaaggctaacttgttataattaattgacttctaacagaaagtgaactaccaaacttcttacagaaaaattaactaccacaactaacttttaa 5320984  T
Q  107 gctagaactacaatatcaagtattgnnnnnnnnnnnngttattattattttcatgtaatgtttggaaatttagagctcnnnnnnnagctcattcttcacc 206  Q
    ||||||||||||||||||| |||||            ||||||||||||||||||||||||||||||||||||||||        |||||||||||||||    
T  5320985 gctagaactacaatatcaaatattgaaaaaacaaa--gttattattattttcatgtaatgtttggaaatttagagctttttttttagctcattcttcacc 5321082  T
Q  207 ccgtcacctttcacttctgcaacaagcttcatcccctacttgtgcaaaaacttcaatggcaagaatccaatcatgccacaggtatatccaatgaaagact 306  Q
    | ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  5321083 ctgtcacctttcacttctgcaacaagcatcatcctctacttgtgcaaaaacttcaatggcaagaacccaatcatgccacaggtacatccaatgaaagact 5321182  T
Q  307 atctttgaatcctgtgcatctaaaattaaataccatctaactaccattttttactcaaactatcaatcaagctccataagaataattatcttctcataat 406  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          
T  5321183 atctttgaatcctgtgcatctaaaattaaataccaactaactaccattttttactcaaactatcaatcaagctccataagaataattatcttct------ 5321276  T
Q  407 caacaagtagaaagagtcattgctggcattgctgcccacaaacatcacaaactgttagtaaatcctacaatt 478  Q
       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5321277 ---caagtagaaagagtcattgctggcattgctgcccacaaacatcacaaactgttagtaaatcctacaatt 5321345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 562 - 671
Target Start/End: Original strand, 10453710 - 10453826
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaaatccatat 654  Q
    |||||||||||||||||| ||||  |||||||||||| | ||||||||||||||| ||| |||       |||||||||||| ||||||||||||||       
T  10453710 aactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaacccttctcaagaatcctatctatccgatctgggactaaatccacca 10453809  T
Q  655 agtgttggctgctaaca 671  Q
    |||||||||||||||||    
T  10453810 agtgttggctgctaaca 10453826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 562 - 651
Target Start/End: Original strand, 34715462 - 34715558
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaaatcca 651  Q
    |||||||||||||||||| ||||  |||||||||||| | ||||||||||||||||||| |||       |||||||||||||||||||||||||||    
T  34715462 aactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaaaagtgctatctatccgatgtgggactaaatcca 34715558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 562 - 651
Target Start/End: Complemental strand, 3985870 - 3985774
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt-------ttcatatctatccgatgtgggactaaatcca 651  Q
    |||||||||||||||||| ||||  |||||||||||| |  ||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  3985870 aactcatccttacaaaaccggcttgtaaggtgaggagtgcttcctctttataaactcttctcaaaagtcatatctatccgatgtgggactaaatcca 3985774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 562 - 651
Target Start/End: Complemental strand, 21750572 - 21750476
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactct-------tttcatatctatccgatgtgggactaaatcca 651  Q
    |||||||||||||||||||||||  |||||||||||| | ||||||||||||||||||        ||| |||||| ||||||||||||||||||||    
T  21750572 aactcatccttacaaaactggcttgtaaggtgaggagtgcctcctctttataaactctgatcaagcttcctatctaaccgatgtgggactaaatcca 21750476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 562 - 651
Target Start/End: Complemental strand, 44573423 - 44573327
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaaatcca 651  Q
    |||||||||||||||||| ||||  || ||||||||| | ||||||||||||||||||| |||       |||||||||||||||||||||||||||    
T  44573423 aactcatccttacaaaaccggcttgtagggtgaggagtgcctcctctttataaactcttctcaagagtactatctatccgatgtgggactaaatcca 44573327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 562 - 650
Target Start/End: Original strand, 11244548 - 11244643
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaaatcc 650  Q
    |||||||||||||||||| ||||  || ||||||||| | ||||||||||||||||||| |||       ||||||||||||||||||||||||||    
T  11244548 aactcatccttacaaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaagaaacctatctatccgatgtgggactaaatcc 11244643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 567 - 651
Target Start/End: Complemental strand, 27219421 - 27219330
Alignment:
Q  567 atccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaaatcca 651  Q
    ||||||||||||| ||||  |||||||||||| | ||||||||||||||||||| |||       |||||||||||||||||||||||||||    
T  27219421 atccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgctatctatccgatgtgggactaaatcca 27219330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 565 - 620
Target Start/End: Original strand, 39956477 - 39956532
Alignment:
Q  565 tcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    ||||||||||||||||||||  |||||||||||  |||||||||||||||||||||    
T  39956477 tcatccttacaaaactggcttgtaaggtgaggattgtctcctctttataaactctt 39956532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 562 - 620
Target Start/End: Complemental strand, 9179004 - 9178946
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    ||||||||||| |||||||||||  |||||||| ||| |||||||||||||||||||||    
T  9179004 aactcatccttccaaaactggcttgtaaggtgaagagtgtctcctctttataaactctt 9178946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 562 - 620
Target Start/End: Complemental strand, 11414460 - 11414402
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||||||||| ||||  |||||||||||  |||||||||||||||||||||    
T  11414460 aactcatccttacaaaaccggcttctaaggtgaggattgtctcctctttataaactctt 11414402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 562 - 651
Target Start/End: Original strand, 13769298 - 13769394
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaaatcca 651  Q
    ||||||||||||||||||  |||  |||||||||||| | ||||||||||||||||||| |||       ||||||||| |||||||||||||||||    
T  13769298 aactcatccttacaaaaccagcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgctatctatccaatgtgggactaaatcca 13769394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 562 - 651
Target Start/End: Original strand, 14170006 - 14170102
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaaatcca 651  Q
    |||||||||||||||||| ||||  |||||||||||| | |||||||||||||| |||| |||       ||| |||||||||||||||||||||||    
T  14170006 aactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaaatcttctcaagagtgttatttatccgatgtgggactaaatcca 14170102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 562 - 620
Target Start/End: Complemental strand, 35011754 - 35011696
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||||||||| || | ||||||||||||| ||||||||||||||| |||||    
T  35011754 aactcatccttacaaaaccggttcataaggtgaggagtgtctcctctttataatctctt 35011696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 562 - 620
Target Start/End: Complemental strand, 35011961 - 35011903
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||||||||| || | ||||||||||||| | |||||||||||||||||||    
T  35011961 aactcatccttacaaaaccggttcataaggtgaggagtgcctcctctttataaactctt 35011903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 554 - 651
Target Start/End: Original strand, 43101370 - 43101474
Alignment:
Q  554 tggggtcaaactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaa 646  Q
    ||||| |||||||||||||||||||| |  |  |||||||||||| | ||||||||||||||||||| |||       |||||||| |||||||||||||    
T  43101370 tggggccaaactcatccttacaaaaccgatttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtcctatctatctgatgtgggactaa 43101469  T
Q  647 atcca 651  Q
    |||||    
T  43101470 atcca 43101474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 562 - 620
Target Start/End: Complemental strand, 44573736 - 44573678
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||||||||| ||||  |||||||||||| | |||||||||||||||||||    
T  44573736 aactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactctt 44573678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 562 - 620
Target Start/End: Complemental strand, 44574033 - 44573975
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||||||||| ||||  |||||||||||| | |||||||||||||||||||    
T  44574033 aactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactctt 44573975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 562 - 620
Target Start/End: Original strand, 50203864 - 50203922
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||||||||| || | ||||||||||||| | |||||||||||||||||||    
T  50203864 aactcatccttacaaaaccggtttataaggtgaggagtgcctcctctttataaactctt 50203922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 562 - 650
Target Start/End: Original strand, 15820612 - 15820707
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaaatcc 650  Q
    ||||||||| |||||||| ||||  || ||||||||| |||||||| |||||||||||| |||       ||||||||||||||||||||||||||    
T  15820612 aactcatccctacaaaaccggcttgtacggtgaggagtgtctcctcgttataaactcttctcaagaatcctatctatccgatgtgggactaaatcc 15820707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 562 - 650
Target Start/End: Original strand, 48511646 - 48511741
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt-------ttcatatctatccgatgtgggactaaatcc 650  Q
    ||||||||| |||||||| ||||  || ||||||||| | |||||||||||||||||||       ||| ||||||||||||||||||||||||||    
T  48511646 aactcatccatacaaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaagattcctatctatccgatgtgggactaaatcc 48511741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 562 - 644
Target Start/End: Complemental strand, 49477631 - 49477542
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggact 644  Q
    |||||||||||||||||| ||||  |||||||||||  | ||||||||||||||||||| |||       ||||||||||||||||||||    
T  49477631 aactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtgggact 49477542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 562 - 620
Target Start/End: Original strand, 4191129 - 4191187
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||||||||| ||||  |||||| ||||  |||||||||||||||||||||    
T  4191129 aactcatccttacaaaaccggcttgtaaggtcaggattgtctcctctttataaactctt 4191187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 562 - 620
Target Start/End: Original strand, 19820535 - 19820593
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||||||||| || |  |||||||||||  |||||||||||||||||||||    
T  19820535 aactcatccttacaaaaccggtttgtaaggtgaggattgtctcctctttataaactctt 19820593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 562 - 620
Target Start/End: Original strand, 22407448 - 22407506
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||||||||| ||||  |||||||||||| | |||||||||||| ||||||    
T  22407448 aactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttatatactctt 22407506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 562 - 620
Target Start/End: Original strand, 22407655 - 22407713
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||||||||| ||||  |||||||||||| | |||||||||||| ||||||    
T  22407655 aactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttatatactctt 22407713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 562 - 620
Target Start/End: Original strand, 39078778 - 39078836
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||||||||| ||||  |||||||||||  | |||||||||||||||||||    
T  39078778 aactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactctt 39078836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 562 - 620
Target Start/End: Original strand, 39956681 - 39956739
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||||||||| ||||  |||||||||||  | |||||||||||||||||||    
T  39956681 aactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactctt 39956739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 562 - 620
Target Start/End: Original strand, 44461074 - 44461132
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    ||||||||||||||||||||  | | ||||||||||  |||||||||||||||||||||    
T  44461074 aactcatccttacaaaactgattcacaaggtgaggaatgtctcctctttataaactctt 44461132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 562 - 651
Target Start/End: Complemental strand, 45443377 - 45443281
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaaatcca 651  Q
    |||||||||||| ||||| ||||  |||||||| ||| | ||||||||||||||||||| |||       ||||||||| |||||||||||||||||    
T  45443377 aactcatccttaaaaaaccggcttgtaaggtgaagagtgcctcctctttataaactcttctcaagagtgctatctatccaatgtgggactaaatcca 45443281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 562 - 616
Target Start/End: Complemental strand, 50057126 - 50057072
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaac 616  Q
    |||||||||||||||||||||||  |||||||||| | | |||||||||||||||    
T  50057126 aactcatccttacaaaactggcttgtaaggtgaggggtgcctcctctttataaac 50057072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 562 - 620
Target Start/End: Complemental strand, 50692420 - 50692362
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||||||||| ||||  |||||||||||  | |||||||||||||||||||    
T  50692420 aactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactctt 50692362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 562 - 620
Target Start/End: Complemental strand, 50692623 - 50692565
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||||||||| ||||  |||||||||||  | |||||||||||||||||||    
T  50692623 aactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactctt 50692565  T

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Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 625 - 671
Target Start/End: Original strand, 51734634 - 51734680
Alignment:
Q  625 tatctatccgatgtgggactaaatccatatagtgttggctgctaaca 671  Q
    |||||||||||||||||||||||||||   |||||||||||||||||    
T  51734634 tatctatccgatgtgggactaaatccaccgagtgttggctgctaaca 51734680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 562 - 620
Target Start/End: Original strand, 53761405 - 53761463
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||| ||||||||||| |||| || |||||||||| | |||||||||||||||||||    
T  53761405 aactcaaccttacaaaaccggctcattaggtgaggagtgcctcctctttataaactctt 53761463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 562 - 650
Target Start/End: Complemental strand, 9179230 - 9179135
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt-------ttcatatctatccgatgtgggactaaatcc 650  Q
    |||||||||||||||||| | ||  |||||||||||| |  ||||||||||||||||||        |||| ||||||||||||||||||||||||    
T  9179230 aactcatccttacaaaaccgacttgtaaggtgaggagtgcatcctctttataaactcttctcatgaatcatgtctatccgatgtgggactaaatcc 9179135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 562 - 650
Target Start/End: Original strand, 10856633 - 10856728
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaaatcc 650  Q
    |||||||||||||||||| ||||  ||  || ||||| | |||||||||||||||||||||||       |||| |||||||||||||||||||||    
T  10856633 aactcatccttacaaaaccggcttgtatagtaaggagtgcctcctctttataaactcttttcaagaatcctatccatccgatgtgggactaaatcc 10856728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 562 - 619
Target Start/End: Original strand, 31563706 - 31563763
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactct 619  Q
    |||||| ||||||||||| ||||  |||||||||||| | ||||||||||||||||||    
T  31563706 aactcaaccttacaaaaccggcttctaaggtgaggagtgcctcctctttataaactct 31563763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 562 - 619
Target Start/End: Original strand, 34356849 - 34356906
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactct 619  Q
    |||||||||||||||||| ||||  |||||||||||| |  |||||||||||||||||    
T  34356849 aactcatccttacaaaaccggcttgtaaggtgaggagtgcttcctctttataaactct 34356906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 562 - 619
Target Start/End: Original strand, 38300290 - 38300347
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactct 619  Q
    |||||||||||||||||| ||||  ||||||| |||| | ||||||||||||||||||    
T  38300290 aactcatccttacaaaaccggcttgtaaggtggggagtgcctcctctttataaactct 38300347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 562 - 619
Target Start/End: Original strand, 38300759 - 38300816
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactct 619  Q
    ||||||||| |||||||| ||||  |||||||||||| | ||||||||||||||||||    
T  38300759 aactcatccgtacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactct 38300816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 556 - 620
Target Start/End: Original strand, 29763697 - 29763761
Alignment:
Q  556 gggtcaaactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    ||||| || ||||||||||||||| || | ||||| || |||| |||||||||||||||||||||    
T  29763697 gggtctaattcatccttacaaaaccggttcataagatggggagtgtctcctctttataaactctt 29763761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 569 - 644
Target Start/End: Complemental strand, 54495621 - 54495539
Alignment:
Q  569 ccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggact 644  Q
    ||||||||||| ||||  |||||||||||  ||||||||||||||||||||| |||       ||||||||||||||||||||    
T  54495621 ccttacaaaaccggcttgtaaggtgaggattgtctcctctttataaactcttctcaagagtcttatctatccgatgtgggact 54495539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 562 - 644
Target Start/End: Original strand, 9264093 - 9264182
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggact 644  Q
    |||||||||||||||||| ||||  |||||||||||  | |||||||||||| |||||| |||       ||||||||||||||||||||    
T  9264093 aactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatctatccgatgtgggact 9264182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 554 - 617
Target Start/End: Complemental strand, 35015590 - 35015527
Alignment:
Q  554 tggggtcaaactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaact 617  Q
    ||||| ||||||||| |||||||||| |||| |||| |||||||  | ||||||||||||||||    
T  35015590 tggggccaaactcatacttacaaaaccggcttataaagtgaggattgcctcctctttataaact 35015527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 562 - 617
Target Start/End: Complemental strand, 49477424 - 49477369
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaact 617  Q
    |||||||||||||||||| ||||  |||||||||||  | ||||||||||||||||    
T  49477424 aactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaact 49477369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 562 - 644
Target Start/End: Original strand, 51642642 - 51642731
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggact 644  Q
    |||||||||||||||||| ||||  |||||||||||  | |||||||||||| |||||| |||       ||||||||||||||||||||    
T  51642642 aactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatctatccgatgtgggact 51642731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 562 - 620
Target Start/End: Original strand, 9264300 - 9264358
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||||||||| ||||  |||||||||||  | |||||||||||| ||||||    
T  9264300 aactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactctt 9264358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 629 - 671
Target Start/End: Original strand, 10453966 - 10454008
Alignment:
Q  629 tatccgatgtgggactaaatccatatagtgttggctgctaaca 671  Q
    |||||||||||||||||||||||   |||||||||||||||||    
T  10453966 tatccgatgtgggactaaatccactgagtgttggctgctaaca 10454008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 562 - 620
Target Start/End: Original strand, 21832698 - 21832756
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    ||||||||||||||||||  ||  ||||||||||||  |||||||| ||||||||||||    
T  21832698 aactcatccttacaaaaccagcatataaggtgaggattgtctcctccttataaactctt 21832756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 562 - 620
Target Start/End: Complemental strand, 22339838 - 22339780
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||||||||| | ||  |||||||||||  | |||||||||||||||||||    
T  22339838 aactcatccttacaaaaccgacttgtaaggtgaggattgcctcctctttataaactctt 22339780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 562 - 620
Target Start/End: Original strand, 33909840 - 33909898
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||||||||| ||||  ||||| |||||| |  ||||||||||||||||||    
T  33909840 aactcatccttacaaaaccggcttgtaaggcgaggagtgcatcctctttataaactctt 33909898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 570 - 620
Target Start/End: Complemental strand, 44461377 - 44461327
Alignment:
Q  570 cttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||| |||||||| | ||||||||||||| |||||||||||||||| ||||    
T  44461377 cttataaaactggttcataaggtgaggagtgtctcctctttataaattctt 44461327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 554 - 620
Target Start/End: Original strand, 50338381 - 50338447
Alignment:
Q  554 tggggtcaaactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    ||||||| |||||| ||||||||||| ||||  |||||||| ||  ||||||||| |||||||||||    
T  50338381 tggggtctaactcaaccttacaaaaccggcttgtaaggtgaagattgtctcctctatataaactctt 50338447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 562 - 620
Target Start/End: Original strand, 51338448 - 51338506
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||||||||| ||||  |||||||||||  | |||||||||||| ||||||    
T  51338448 aactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactctt 51338506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 562 - 620
Target Start/End: Original strand, 51642435 - 51642493
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||||||||| ||||  |||||||||||  | |||||||||||| ||||||    
T  51642435 aactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactctt 51642493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 562 - 611
Target Start/End: Complemental strand, 24539251 - 24539202
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctcttta 611  Q
    |||||||||||||||||  ||||  |||||||||||| ||||||||||||    
T  24539251 aactcatccttacaaaatcggcttgtaaggtgaggagtgtctcctcttta 24539202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 562 - 619
Target Start/End: Original strand, 31564010 - 31564067
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactct 619  Q
    |||||| | ||||||||| ||||  |||||||||||| | ||||||||||||||||||    
T  31564010 aactcaactttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactct 31564067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 562 - 619
Target Start/End: Original strand, 40230646 - 40230703
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactct 619  Q
    |||||| ||||||||||| ||||  |||||||||||  | ||||||||||||||||||    
T  40230646 aactcaaccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactct 40230703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 3e-23; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 553 - 676
Target Start/End: Original strand, 43384278 - 43384408
Alignment:
Q  553 atggggtcaaactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggacta 645  Q
    |||||| | |||||||||||||||||| ||||  |||||||||||| | ||||||||||||||||||| |||       |||||||||||||||||||||    
T  43384278 atggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagaatcctatctatccgatgtgggacta 43384377  T
Q  646 aatccatatagtgttggctgctaacataatc 676  Q
    ||||| |  ||||||||||||||||| ||||    
T  43384378 aatccgttgagtgttggctgctaacaaaatc 43384408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 562 - 651
Target Start/End: Original strand, 257274 - 257370
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttc-------atatctatccgatgtgggactaaatcca 651  Q
    |||||||||||||||||| ||||| |||||||||||| | ||||||||||||||||||| ||       ||||||||||||||||||||||||||||    
T  257274 aactcatccttacaaaaccggctagtaaggtgaggagtgcctcctctttataaactcttctcaagaataatatctatccgatgtgggactaaatcca 257370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 555 - 673
Target Start/End: Original strand, 36092599 - 36092724
Alignment:
Q  555 ggggtcaaactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaaa 647  Q
    |||||| ||||||||||||||||||  |||  |||||||||||| | ||||||| ||||||||||| |||       |||||||||||||||||||||||    
T  36092599 ggggtctaactcatccttacaaaaccagcttgtaaggtgaggagtgcctcctctctataaactcttctcaagaatcctatctatccgatgtgggactaaa 36092698  T
Q  648 tccatatagtgttggctgctaacata 673  Q
    | ||   ||||||||| |||||||||    
T  36092699 tacaccgagtgttggcggctaacata 36092724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 562 - 651
Target Start/End: Original strand, 1661198 - 1661294
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaaatcca 651  Q
    ||||||| |||||||||| ||||  |||||||||||| | ||||||||||||||||||| |||       |||||||||||||||||||||||||||    
T  1661198 aactcattcttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagttttatctatccgatgtgggactaaatcca 1661294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 562 - 651
Target Start/End: Original strand, 37272052 - 37272148
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaaatcca 651  Q
    |||||||||||||||||| ||||  |||||||||||| | ||||||||||||||||||| |||       |||||| ||||||||||||||||||||    
T  37272052 aactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttatcaagagtcctatctaaccgatgtgggactaaatcca 37272148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 562 - 651
Target Start/End: Original strand, 43167900 - 43167996
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaaatcca 651  Q
    |||||||||||||||||| |||| ||||||||||||  | ||||||||||||||||||| |||       |||||||||||| ||||||||||||||    
T  43167900 aactcatccttacaaaaccggctcataaggtgaggattgcctcctctttataaactcttctcaagagtgctatctatccgatttgggactaaatcca 43167996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 562 - 651
Target Start/End: Original strand, 1663611 - 1663708
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctc-tttataaactcttttca-------tatctatccgatgtgggactaaatcca 651  Q
    |||||||||||||||||| ||||  |||||||||||| | |||||| ||||||||||||| |||       |||||||||||||||||||||||||||    
T  1663611 aactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctcttttataaactcttctcaagagtgctatctatccgatgtgggactaaatcca 1663708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 562 - 651
Target Start/End: Original strand, 7135250 - 7135346
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaaatcca 651  Q
    |||||||| ||||||||| ||||  |||||||||||| | ||||||||||||||||||| |||       ||||||||||||||| |||||||||||    
T  7135250 aactcatctttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtcctatctatccgatgtgtgactaaatcca 7135346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 570 - 620
Target Start/End: Complemental strand, 14691161 - 14691111
Alignment:
Q  570 cttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||||||  |||||||||||| |||||||||||||||||||||    
T  14691161 cttacaaaactggcttgtaaggtgaggagtgtctcctctttataaactctt 14691111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 562 - 620
Target Start/End: Complemental strand, 28910129 - 28910071
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||||||||| ||||  |||||||||||| | |||||||||||||||||||    
T  28910129 aactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactctt 28910071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 562 - 620
Target Start/End: Complemental strand, 34590625 - 34590567
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||||||||| || | ||||||||||||| | |||||||||||||||||||    
T  34590625 aactcatccttacaaaaccggttcataaggtgaggagtgcctcctctttataaactctt 34590567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 557 - 650
Target Start/End: Complemental strand, 34748880 - 34748780
Alignment:
Q  557 ggtcaaactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaaatc 649  Q
    |||| |||||||||||||||||| ||||  || ||||||||  | ||||||||||||||||||| |||       |||||||||||||||||||||||||    
T  34748880 ggtctaactcatccttacaaaaccggcttgtacggtgaggaatgcctcctctttataaactcttctcaagaatcctatctatccgatgtgggactaaatc 34748781  T
Q  650 c 650  Q
    |    
T  34748780 c 34748780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 562 - 671
Target Start/End: Original strand, 36092399 - 36092515
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt-------ttcatatctatccgatgtgggactaaatccatat 654  Q
    |||||||||||||||||| ||||  ||||||||||||   ||||||| |||||||||||        |||||||||||| |||||||||||||||||       
T  36092399 aactcatccttacaaaaccggcttgtaaggtgaggagtacctcctctctataaactcttctcaagaatcatatctatccaatgtgggactaaatccactg 36092498  T
Q  655 agtgttggctgctaaca 671  Q
    |||||||| ||||||||    
T  36092499 agtgttggttgctaaca 36092515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 562 - 620
Target Start/End: Original strand, 40137703 - 40137761
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||||||||| ||||  |||||||||||| ||||| |||||||||||||||    
T  40137703 aactcatccttacaaaaccggctcgtaaggtgaggagtgtctcttctttataaactctt 40137761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 562 - 620
Target Start/End: Original strand, 44760514 - 44760572
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||||||||||||||   ||||||||||| | |||||||||||||||||||    
T  44760514 aactcatccttacaaaactggcttgaaaggtgaggagtgcctcctctttataaactctt 44760572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 562 - 650
Target Start/End: Complemental strand, 27585353 - 27585258
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaaatcc 650  Q
    |||||||||||||||||| ||||  || ||||||||| | ||||| ||||||||||||| |||       ||||||||||||||||||||||||||    
T  27585353 aactcatccttacaaaaccggcttgtacggtgaggagtgcctcctttttataaactcttctcaagaatcctatctatccgatgtgggactaaatcc 27585258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 555 - 620
Target Start/End: Complemental strand, 31374869 - 31374804
Alignment:
Q  555 ggggtcaaactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||| |||||||||||||||||| ||||  |||||||||||  | |||||||||||||||||||    
T  31374869 ggggtctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactctt 31374804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 562 - 650
Target Start/End: Original strand, 36270477 - 36270572
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaaatcc 650  Q
    |||||||||||||||| | ||||  || ||||||||| ||||||||||||||||||| | |||       ||||||||||||||||||||||||||    
T  36270477 aactcatccttacaaagccggcttgtacggtgaggagtgtctcctctttataaactcgtctcaagaatcctatctatccgatgtgggactaaatcc 36270572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 562 - 650
Target Start/End: Original strand, 39549985 - 39550080
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaaatcc 650  Q
    |||||||||||||||||||||||  ||  |||| ||| | ||||||||||||||||||| |||       ||||||||||||||||||||||||||    
T  39549985 aactcatccttacaaaactggcttgtacagtgatgagtgcctcctctttataaactcttctcaagaatcctatctatccgatgtgggactaaatcc 39550080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 562 - 619
Target Start/End: Original strand, 48116303 - 48116360
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactct 619  Q
    |||||||||||||||||| ||||  |||||||||||| || |||||||||||||||||    
T  48116303 aactcatccttacaaaaccggcttgtaaggtgaggagtgtgtcctctttataaactct 48116360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 565 - 617
Target Start/End: Original strand, 36492553 - 36492605
Alignment:
Q  565 tcatccttacaaaactggctaataaggtgaggagagtctcctctttataaact 617  Q
    ||||||||||||||||||||  |||||||||||| | ||||||||||||||||    
T  36492553 tcatccttacaaaactggcttttaaggtgaggagtgcctcctctttataaact 36492605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 562 - 617
Target Start/End: Complemental strand, 33855788 - 33855733
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaact 617  Q
    ||||||| |||||||||| || | ||||||||||||| ||||||||||||||||||    
T  33855788 aactcattcttacaaaaccggttcataaggtgaggagtgtctcctctttataaact 33855733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 562 - 620
Target Start/End: Complemental strand, 6783135 - 6783077
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||||||||| ||||  |||||||||||  | |||||||||||||||||||    
T  6783135 aactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactctt 6783077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 562 - 620
Target Start/End: Complemental strand, 12524634 - 12524576
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||| ||||| |||| ||||||| ||||| | |||||||||||||||||||    
T  12524634 aactcatccttataaaacaggcttataaggttaggagtggctcctctttataaactctt 12524576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 562 - 620
Target Start/End: Complemental strand, 29780244 - 29780186
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||| ||||| | ||  |||||||||||| |||||||||||||||||||||    
T  29780244 aactcatccttataaaaccgacttgtaaggtgaggagtgtctcctctttataaactctt 29780186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 562 - 651
Target Start/End: Original strand, 37530930 - 37531026
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaaatcca 651  Q
    ||||||||||| |||||| ||||  |||| ||||||| | ||||||||||||||||||| |||       ||||||||||| |||||||||||||||    
T  37530930 aactcatccttgcaaaaccggcttgtaagttgaggagtgcctcctctttataaactcttctcaagaatcctatctatccgacgtgggactaaatcca 37531026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 562 - 620
Target Start/End: Original strand, 39808604 - 39808662
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||| ||||||||||||  |||||||||||  | |||||||||||||||||||    
T  39808604 aactcatcctcacaaaactggcttgtaaggtgaggattgcctcctctttataaactctt 39808662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 562 - 651
Target Start/End: Original strand, 40121625 - 40121721
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaaatcca 651  Q
    |||||||||||||||||| ||||  || ||||||||| | ||||||| ||||||||||| |||       |||||||||||||||| ||||||||||    
T  40121625 aactcatccttacaaaaccggcttgtagggtgaggagtgcctcctctctataaactcttctcaagagtactatctatccgatgtggaactaaatcca 40121721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 562 - 620
Target Start/End: Complemental strand, 43288629 - 43288571
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||| ||||||||||||| ||||  |||||||||||| | |||||||||||||||||||    
T  43288629 aactaatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactctt 43288571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 562 - 619
Target Start/End: Original strand, 40703418 - 40703475
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactct 619  Q
    |||||||||||||||||| ||||  | |||||||||| | ||||||||||||||||||    
T  40703418 aactcatccttacaaaaccggcttgtgaggtgaggagtgcctcctctttataaactct 40703475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 562 - 615
Target Start/End: Original strand, 40703659 - 40703712
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaa 615  Q
    |||||||||||||||||| ||||  | |||||||||| ||||||||||||||||    
T  40703659 aactcatccttacaaaaccggcttgtgaggtgaggagtgtctcctctttataaa 40703712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 562 - 650
Target Start/End: Original strand, 47346101 - 47346196
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt-------ttcatatctatccgatgtgggactaaatcc 650  Q
    ||||||||| |||||||| ||||  || ||||||||| | |||||||||||||||||||       ||| |||||||| |||||||||||||||||    
T  47346101 aactcatccgtacaaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaagattcctatctatctgatgtgggactaaatcc 47346196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 562 - 650
Target Start/End: Original strand, 47346330 - 47346425
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt-------ttcatatctatccgatgtgggactaaatcc 650  Q
    ||||||||| |||||||| ||||  || ||||||||| | |||||||||||||||||||       ||| ||||| ||||||||||||||||||||    
T  47346330 aactcatccgtacaaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaagattcctatctttccgatgtgggactaaatcc 47346425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 564 - 620
Target Start/End: Complemental strand, 36237897 - 36237841
Alignment:
Q  564 ctcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||||||| ||||  ||||| |||||| | |||||||||||||||||||    
T  36237897 ctcatccttacaaaaccggcttgtaaggagaggagtgcctcctctttataaactctt 36237841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 564 - 620
Target Start/End: Complemental strand, 36238100 - 36238044
Alignment:
Q  564 ctcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||||||| ||||  ||||| ||||||||  ||||||||||||||||||    
T  36238100 ctcatccttacaaaaccggcttgtaaggagaggagagcatcctctttataaactctt 36238044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 571 - 621
Target Start/End: Complemental strand, 2179743 - 2179693
Alignment:
Q  571 ttacaaaactggctaataaggtgaggagagtctcctctttataaactcttt 621  Q
    |||||||||||| |  |||||||||||  ||||||||||||||||||||||    
T  2179743 ttacaaaactggtttgtaaggtgaggattgtctcctctttataaactcttt 2179693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 562 - 620
Target Start/End: Original strand, 4258007 - 4258065
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||| |||||||| | ||||||||||||| | ||||| || ||||||||||    
T  4258007 aactcatccttaaaaaactggttcataaggtgaggagtgcctcctattgataaactctt 4258065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 554 - 620
Target Start/End: Complemental strand, 9378898 - 9378832
Alignment:
Q  554 tggggtcaaactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    ||||||| |||||||||||||||||| ||||  |||||  ||||  | |||||||||||||||||||    
T  9378898 tggggtctaactcatccttacaaaaccggcttgtaaggcaaggattgcctcctctttataaactctt 9378832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 562 - 620
Target Start/End: Complemental strand, 12525230 - 12525172
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    ||||||||||||||||||| |||  ||||||  |||| |||| ||||||||||||||||    
T  12525230 aactcatccttacaaaactagcttgtaaggtatggagtgtcttctctttataaactctt 12525172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 562 - 620
Target Start/End: Complemental strand, 16564991 - 16564933
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||| ||||| || | ||||||||||||| | ||||| |||||||||||||    
T  16564991 aactcatccttaaaaaaccggttcataaggtgaggagtgcctcctatttataaactctt 16564933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 562 - 620
Target Start/End: Original strand, 16600671 - 16600729
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||| ||||| || | ||||||||||||| | ||||| |||||||||||||    
T  16600671 aactcatccttaaaaaaccggttcataaggtgaggagtgcctcctatttataaactctt 16600729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 562 - 620
Target Start/End: Complemental strand, 33909403 - 33909345
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    ||||||||| |||||||| ||||  ||  |||||||| |||||||||||||||||||||    
T  33909403 aactcatccatacaaaaccggcttgtacagtgaggagtgtctcctctttataaactctt 33909345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 562 - 620
Target Start/End: Original strand, 39808471 - 39808529
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||| ||||||| ||||  |||||||||||  | |||||||||||||||||||    
T  39808471 aactcatcctcacaaaaccggcttttaaggtgaggattgcctcctctttataaactctt 39808529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 562 - 619
Target Start/End: Original strand, 13310432 - 13310489
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactct 619  Q
    |||||||||||||||||| || |  | | |||||||| ||||||||||||||||||||    
T  13310432 aactcatccttacaaaaccggtttgtgaagtgaggagtgtctcctctttataaactct 13310489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 622 - 671
Target Start/End: Original strand, 14742689 - 14742737
Alignment:
Q  622 tcatatctatccgatgtgggactaaatccatatagtgttggctgctaaca 671  Q
    |||||||||||| |||||| ||||||||||  ||||||||||||||||||    
T  14742689 tcatatctatccaatgtgg-actaaatccacttagtgttggctgctaaca 14742737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 562 - 619
Target Start/End: Original strand, 40703866 - 40703923
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactct 619  Q
    |||||||||||||||| | | ||  | |||||||||| ||||||||||||||||||||    
T  40703866 aactcatccttacaaatccgacttgtgaggtgaggagtgtctcctctttataaactct 40703923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 1e-19; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 562 - 651
Target Start/End: Original strand, 4022132 - 4022228
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaaatcca 651  Q
    |||||||||||||||||||||||  |||||||||||| | ||||||||||||||||||| |||       |||||||||||||||||||||||||||    
T  4022132 aactcatccttacaaaactggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtcctatctatccgatgtgggactaaatcca 4022228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 554 - 651
Target Start/End: Complemental strand, 17419892 - 17419788
Alignment:
Q  554 tggggtcaaactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaa 646  Q
    ||||||| |||||||||||||||||| ||||  |||||||||||| | ||||||||||||||||||| |||       ||||||||||||||||||||||    
T  17419892 tggggtctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgctatctatccgatgtgggactaa 17419793  T
Q  647 atcca 651  Q
    |||||    
T  17419792 atcca 17419788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 554 - 651
Target Start/End: Original strand, 2697330 - 2697434
Alignment:
Q  554 tggggtcaaactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaa 646  Q
    ||||||| ||||| |||||||||||| ||||  |||||||||||| | ||||||||||||||||||| |||       ||||||||||||||||||||||    
T  2697330 tggggtctaactcgtccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtcctatctatccgatgtgggactaa 2697429  T
Q  647 atcca 651  Q
    |||||    
T  2697430 atcca 2697434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 562 - 651
Target Start/End: Original strand, 19937050 - 19937146
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaaatcca 651  Q
    |||||||||||||||||| ||||  |||||||||||| | ||||||||||||||||||| |||       |||||||||||||||||||||||||||    
T  19937050 aactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagaattctatctatccgatgtgggactaaatcca 19937146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 562 - 620
Target Start/End: Complemental strand, 29413445 - 29413387
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    ||||||||||||||||||||||| ||||||||||||| | |||||||||||||||||||    
T  29413445 aactcatccttacaaaactggctcataaggtgaggagtgcctcctctttataaactctt 29413387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 562 - 651
Target Start/End: Complemental strand, 43423376 - 43423280
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaaatcca 651  Q
    |||||||||||||||||||||||  |||||||||||| | ||||||||||||||||||| |||       |||||||||||||||||| ||||||||    
T  43423376 aactcatccttacaaaactggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgttatctatccgatgtgggaataaatcca 43423280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 554 - 651
Target Start/End: Original strand, 8520092 - 8520196
Alignment:
Q  554 tggggtcaaactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaa 646  Q
    ||||||| |||||||| ||||||||| ||||  |||||||||||| | ||| ||||||||||||||| |||       ||||||||||||||||||||||    
T  8520092 tggggtctaactcatctttacaaaaccggcttgtaaggtgaggagtgcctcttctttataaactcttctcaagagtgctatctatccgatgtgggactaa 8520191  T
Q  647 atcca 651  Q
    |||||    
T  8520192 atcca 8520196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 562 - 651
Target Start/End: Complemental strand, 31305808 - 31305712
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaaatcca 651  Q
    |||||||||||||||||| ||||  |||||||||||| | ||||||||||||||||||| |||       |||||||| ||||||||||||||||||    
T  31305808 aactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgctatctatcggatgtgggactaaatcca 31305712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 562 - 650
Target Start/End: Complemental strand, 38474380 - 38474285
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaaatcc 650  Q
    |||||||||||||||||| ||||  |||||||||||| | ||||||||||||||||||| |||       |||||||||||||| |||||||||||    
T  38474380 aactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttgtcaagaatcctatctatccgatgtaggactaaatcc 38474285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 562 - 671
Target Start/End: Complemental strand, 18585135 - 18585018
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaaat-ccata 653  Q
    |||||||||||||||||||||||  || |||||||||   |||||||||||||| |||| |||       |||||||||||||||||||||||| |||      
T  18585135 aactcatccttacaaaactggcttgtacggtgaggagtccctcctctttataaaatcttctcaagaatcctatctatccgatgtgggactaaatcccacc 18585036  T
Q  654 tagtgttggctgctaaca 671  Q
     |||||||||||||||||    
T  18585035 gagtgttggctgctaaca 18585018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 554 - 617
Target Start/End: Original strand, 27957808 - 27957871
Alignment:
Q  554 tggggtcaaactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaact 617  Q
    ||||||| |||||||||||||||||| ||||  || ||||||||| ||||||||||||||||||    
T  27957808 tggggtctaactcatccttacaaaaccggcttgtacggtgaggagcgtctcctctttataaact 27957871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 562 - 651
Target Start/End: Original strand, 29383630 - 29383726
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaaatcca 651  Q
    |||||||||||||||||||||||  || ||| ||||| | |||| |||||||||||||| |||       |||||||||||||||||||||||||||    
T  29383630 aactcatccttacaaaactggcttgtacggtaaggagtgcctccgctttataaactcttctcaagtatcttatctatccgatgtgggactaaatcca 29383726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 562 - 620
Target Start/End: Complemental strand, 37600969 - 37600911
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||||||||| |||| ||||||||||||| | | |||||||||||||||||    
T  37600969 aactcatccttacaaaaccggcttataaggtgaggagtgccgcctctttataaactctt 37600911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 562 - 650
Target Start/End: Complemental strand, 12287945 - 12287850
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaaatcc 650  Q
    ||||||||||||||||||  |||  || ||||||||| | ||||||||||||| |||||||||       ||||||||||||||||||||||||||    
T  12287945 aactcatccttacaaaaccagcttgtacggtgaggagtgcctcctctttataacctcttttcaagaatcctatctatccgatgtgggactaaatcc 12287850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 562 - 650
Target Start/End: Complemental strand, 17295075 - 17294980
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaaatcc 650  Q
    ||||||||| |||||||| ||||  || ||||||||| | ||||||||||||||||||| |||       ||||||||||||||||||||||||||    
T  17295075 aactcatccctacaaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaagaatcctatctatccgatgtgggactaaatcc 17294980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 562 - 619
Target Start/End: Complemental strand, 20735852 - 20735795
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactct 619  Q
    |||||||||||||||||| ||||  |||||||||||| | ||||||||||||||||||    
T  20735852 aactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactct 20735795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 555 - 620
Target Start/End: Original strand, 43361552 - 43361617
Alignment:
Q  555 ggggtcaaactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||| |||||||||||||||||| ||||  |||||||||||  | |||||||||||||||||||    
T  43361552 ggggtctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactctt 43361617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 562 - 673
Target Start/End: Complemental strand, 45858752 - 45858633
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaaatccatat 654  Q
    |||||||||||| ||||| | ||  || ||||||||| | ||||||||||||||||||| |||       ||||||||||||||||||||||||||  ||    
T  45858752 aactcatccttataaaaccgacttgtacggtgaggagtgcctcctctttataaactcttctcaagaatcctatctatccgatgtgggactaaatccccat 45858653  T
Q  655 -agtgttggctgctaacata 673  Q
     ||||||||| |||||||||    
T  45858652 gagtgttggccgctaacata 45858633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 562 - 644
Target Start/End: Original strand, 39649091 - 39649180
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggact 644  Q
    |||||||||||||||||| ||||  |||||||||||  | ||||||||||||||||||| |||       ||||||||||||||||||||    
T  39649091 aactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtgggact 39649180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 562 - 651
Target Start/End: Original strand, 2104267 - 2104363
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactct-------tttcatatctatccgatgtgggactaaatcca 651  Q
    |||||||||||||||||| ||||  |||||||||||| | |||||||||| |||||||        ||| |||||| ||||||||||||||||||||    
T  2104267 aactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttacaaactctgatcaagcttcctatctaaccgatgtgggactaaatcca 2104363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 562 - 620
Target Start/End: Complemental strand, 20735619 - 20735561
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||||||||| ||||  |||||||||||| | |||||||||||||| ||||    
T  20735619 aactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaattctt 20735561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 562 - 620
Target Start/End: Original strand, 33879785 - 33879843
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    ||||||||||||||||||  |||  |||||||||||| | |||||||||||||||||||    
T  33879785 aactcatccttacaaaaccagcttgtaaggtgaggagtggctcctctttataaactctt 33879843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 562 - 620
Target Start/End: Complemental strand, 33964470 - 33964412
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    ||||||||||||||||||  |||  |||||||||||| | |||||||||||||||||||    
T  33964470 aactcatccttacaaaaccagcttgtaaggtgaggagtggctcctctttataaactctt 33964412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 562 - 620
Target Start/End: Complemental strand, 36332209 - 36332151
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||||||||| ||||  |||||||||||| |  ||||||||||||||||||    
T  36332209 aactcatccttacaaaaccggcttgtaaggtgaggagtgcatcctctttataaactctt 36332151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 554 - 620
Target Start/End: Complemental strand, 40664315 - 40664249
Alignment:
Q  554 tggggtcaaactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    ||||||| ||| |||||||||||||| ||||  ||||| |||||| | |||||||||||||||||||    
T  40664315 tggggtctaacacatccttacaaaaccggcttgtaaggcgaggagtgcctcctctttataaactctt 40664249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 562 - 620
Target Start/End: Complemental strand, 45403537 - 45403479
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    ||||||||||||||||||  |||  |||||||||||| | |||||||||||||||||||    
T  45403537 aactcatccttacaaaaccagcttgtaaggtgaggagtgcctcctctttataaactctt 45403479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 562 - 619
Target Start/End: Original strand, 463090 - 463147
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactct 619  Q
    |||||||||||||||||| ||||  |||||||||||| |  |||||||||||||||||    
T  463090 aactcatccttacaaaaccggcttgtaaggtgaggagtgcttcctctttataaactct 463147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 562 - 643
Target Start/End: Original strand, 6237976 - 6238056
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttcatatctatccgatgtgggac 643  Q
    |||||||||||| ||||| || | ||||||||||||  ||||||||| ||||||||||| |||   ||||||||||||||||    
T  6237976 aactcatcctta-aaaaccggttcataaggtgaggattgtctcctctatataaactcttatcaagactatccgatgtgggac 6238056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 562 - 619
Target Start/End: Original strand, 11149430 - 11149487
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactct 619  Q
    |||||||||||||||||| ||||  |||||||||||| |  |||||||||||||||||    
T  11149430 aactcatccttacaaaaccggcttgtaaggtgaggagtgcttcctctttataaactct 11149487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 563 - 620
Target Start/End: Complemental strand, 15391915 - 15391858
Alignment:
Q  563 actcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    ||||||||||||||||||||||  |||||||||||  | |||||||||||| ||||||    
T  15391915 actcatccttacaaaactggcttgtaaggtgaggattgcctcctctttatatactctt 15391858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 562 - 619
Target Start/End: Original strand, 21638273 - 21638330
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactct 619  Q
    ||||||||||||||||||   ||  |||||||||||| ||||||||||||||||||||    
T  21638273 aactcatccttacaaaaccatcttgtaaggtgaggagtgtctcctctttataaactct 21638330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 562 - 650
Target Start/End: Complemental strand, 29228545 - 29228450
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt-------ttcatatctatccgatgtgggactaaatcc 650  Q
    ||||||||| |||||||| ||||  || ||||||||| | |||||||||||||||||||       ||| ||||||||||||||||| ||||||||    
T  29228545 aactcatccctacaaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaagattcctatctatccgatgtgggtctaaatcc 29228450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 567 - 620
Target Start/End: Complemental strand, 36326998 - 36326945
Alignment:
Q  567 atccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    ||||||||||||| ||||  |||||||||||| | |||||||||||||||||||    
T  36326998 atccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactctt 36326945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 564 - 620
Target Start/End: Original strand, 27958056 - 27958112
Alignment:
Q  564 ctcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||||||| ||||  || ||||||||| | |||||||||||||||||||    
T  27958056 ctcatccttacaaaaccggcttgtacggtgaggagtgcctcctctttataaactctt 27958112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 556 - 620
Target Start/End: Original strand, 43361758 - 43361822
Alignment:
Q  556 gggtcaaactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    ||||| |||||||||||||||||| ||||  |||||||||||  |  ||||||||||||||||||    
T  43361758 gggtctaactcatccttacaaaaccggcttgtaaggtgaggattgcttcctctttataaactctt 43361822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 562 - 644
Target Start/End: Original strand, 52846856 - 52846945
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggact 644  Q
    |||||||||||||||||| ||||  |||||||||||  | |||||||||||| |||||| |||       ||||||||||||||||||||    
T  52846856 aactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatctatccgatgtgggact 52846945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 554 - 620
Target Start/End: Original strand, 24131880 - 24131946
Alignment:
Q  554 tggggtcaaactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    ||||||| ||||||| |||| ||||||||||  |||| ||||||  | |||||||||||||||||||    
T  24131880 tggggtctaactcattcttataaaactggcttgtaagttgaggattgcctcctctttataaactctt 24131946  T

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Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 562 - 620
Target Start/End: Original strand, 29273232 - 29273290
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||||||||| ||||  |||||||||||  | |||| ||||||||||||||    
T  29273232 aactcatccttacaaaaccggcttgtaaggtgaggattgcctcccctttataaactctt 29273290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 554 - 619
Target Start/End: Complemental strand, 1234031 - 1233966
Alignment:
Q  554 tggggtcaaactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactct 619  Q
    ||||||| |||||||| | |||||||  |||  | |||||||||| ||||||||||||||||||||    
T  1234031 tggggtctaactcatcatcacaaaaccagcttgtgaggtgaggagtgtctcctctttataaactct 1233966  T

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Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 563 - 620
Target Start/End: Complemental strand, 12233379 - 12233322
Alignment:
Q  563 actcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    ||||||||||| ||||| ||||  ||||||||||||   |||||||||||||||||||    
T  12233379 actcatccttataaaaccggcttgtaaggtgaggagtacctcctctttataaactctt 12233322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 622 - 651
Target Start/End: Original strand, 20208156 - 20208185
Alignment:
Q  622 tcatatctatccgatgtgggactaaatcca 651  Q
    ||||||||||||||||||||||||||||||    
T  20208156 tcatatctatccgatgtgggactaaatcca 20208185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 622 - 651
Target Start/End: Original strand, 20208455 - 20208484
Alignment:
Q  622 tcatatctatccgatgtgggactaaatcca 651  Q
    ||||||||||||||||||||||||||||||    
T  20208455 tcatatctatccgatgtgggactaaatcca 20208484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 565 - 614
Target Start/End: Original strand, 21538827 - 21538876
Alignment:
Q  565 tcatccttacaaaactggctaataaggtgaggagagtctcctctttataa 614  Q
    ||||||||||||||| ||||  |||||||||||  |||||||||||||||    
T  21538827 tcatccttacaaaaccggcttgtaaggtgaggattgtctcctctttataa 21538876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 562 - 619
Target Start/End: Original strand, 22892440 - 22892497
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactct 619  Q
    |||||||||||||||||| || |  | |||||||||| | ||||||||||||||||||    
T  22892440 aactcatccttacaaaaccggattgtgaggtgaggagtgcctcctctttataaactct 22892497  T

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Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 562 - 615
Target Start/End: Original strand, 22892695 - 22892748
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaa 615  Q
    |||||||||||||||||| ||||  | ||| |||||| ||||||||||||||||    
T  22892695 aactcatccttacaaaaccggcttgtgaggcgaggagtgtctcctctttataaa 22892748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 6e-18; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 562 - 648
Target Start/End: Original strand, 42768341 - 42768432
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-----tatctatccgatgtgggactaaat 648  Q
    |||||||||||||||||| ||||  |||||||||||| | ||||||||||||||||||| |||     ||||||||||||||||||||||||    
T  42768341 aactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagttatctatccgatgtgggactaaat 42768432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 562 - 651
Target Start/End: Original strand, 3976478 - 3976574
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaaatcca 651  Q
    |||||||||||||||||| ||||  |||||||||||| | ||||||||||||||||||| |||       |||||||||||||||||||||||||||    
T  3976478 aactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagaatattatctatccgatgtgggactaaatcca 3976574  T

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Target: chr2; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 554 - 651
Target Start/End: Original strand, 6183365 - 6183469
Alignment:
Q  554 tggggtcaaactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaa 646  Q
    ||||||| |||||||||||||||||| ||||  ||||||||| || ||||||||||||||||||||| |||       |||||||||||||||||| |||    
T  6183365 tggggtctaactcatccttacaaaaccggcttgtaaggtgagaagtgtctcctctttataaactcttctcaagagtactatctatccgatgtgggattaa 6183464  T
Q  647 atcca 651  Q
    |||||    
T  6183465 atcca 6183469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 561 - 651
Target Start/End: Original strand, 21213891 - 21213988
Alignment:
Q  561 aaactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaaatcca 651  Q
    ||||||||||||||||||| ||||  |||||||||||| | ||||||||||||||||||| |||       ||||||||| |||||||||||||||||    
T  21213891 aaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtactatctatccaatgtgggactaaatcca 21213988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 553 - 651
Target Start/End: Complemental strand, 43169348 - 43169243
Alignment:
Q  553 atggggtcaaactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggacta 645  Q
    |||||| | ||||| |||||||||||||||||   ||||||||||| | ||||||||||||||||||| |||       |||||||||||||||||||||    
T  43169348 atggggcctaactcttccttacaaaactggcttgaaaggtgaggagtgcctcctctttataaactcttctcaagagtactatctatccgatgtgggacta 43169249  T
Q  646 aatcca 651  Q
    ||||||    
T  43169248 aatcca 43169243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 554 - 620
Target Start/End: Complemental strand, 10429844 - 10429778
Alignment:
Q  554 tggggtcaaactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    ||||||| |||||||||||||||||| ||||  |||| ||||||| |||||||||||||||||||||    
T  10429844 tggggtctaactcatccttacaaaaccggcttgtaagatgaggagtgtctcctctttataaactctt 10429778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 562 - 651
Target Start/End: Complemental strand, 11969149 - 11969053
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaaatcca 651  Q
    |||||||||||||||||| ||||  |||||||||||| | ||||||||||||||||||| |||       ||||||||||| |||||||||||||||    
T  11969149 aactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtactatctatccgacgtgggactaaatcca 11969053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 564 - 651
Target Start/End: Original strand, 18901873 - 18901967
Alignment:
Q  564 ctcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaaatcca 651  Q
    ||||| |||||||||| ||||  |||||||| ||| | |||||||||||||||||||||||       |||||||||||||||||||||||||||    
T  18901873 ctcattcttacaaaacaggcttgtaaggtgaagagtgcctcctctttataaactcttttcaagagtcttatctatccgatgtgggactaaatcca 18901967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 562 - 649
Target Start/End: Complemental strand, 43195881 - 43195787
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaaatc 649  Q
    |||||||||||||||||| ||||  |||||||||||| | ||||||||||||||||||| |||       |||||||| ||||||||||||||||    
T  43195881 aactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtactatctatctgatgtgggactaaatc 43195787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 565 - 620
Target Start/End: Complemental strand, 7877938 - 7877883
Alignment:
Q  565 tcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    ||||||||||||||| ||||  |||||||||||| |||||||||||||||||||||    
T  7877938 tcatccttacaaaaccggcttgtaaggtgaggagtgtctcctctttataaactctt 7877883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 562 - 651
Target Start/End: Original strand, 3977010 - 3977106
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaaatcca 651  Q
    |||||||||||||||||| ||||  |||  ||||||| | ||||||||||||||||||| |||       |||||||||||||||||||||||||||    
T  3977010 aactcatccttacaaaaccggcttgtaatttgaggagtgcctcctctttataaactcttctcaagagtactatctatccgatgtgggactaaatcca 3977106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 557 - 650
Target Start/End: Original strand, 10862060 - 10862160
Alignment:
Q  557 ggtcaaactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaaatc 649  Q
    |||| |||||||||||||||||| ||||  || ||||| ||| | ||||||||||||||||||| |||       |||||||||||||||||||||||||    
T  10862060 ggtctaactcatccttacaaaaccggcttgtacggtgatgagtgcctcctctttataaactcttctcaagaatcctatctatccgatgtgggactaaatc 10862159  T
Q  650 c 650  Q
    |    
T  10862160 c 10862160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 562 - 620
Target Start/End: Original strand, 21214208 - 21214266
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||||||||| ||||  |||||||||||| | |||||||||||||||||||    
T  21214208 aactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactctt 21214266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 562 - 651
Target Start/End: Complemental strand, 23054423 - 23054327
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttc-------atatctatccgatgtgggactaaatcca 651  Q
    |||||||||||||||||| | ||  |||||||||||| | ||||||||||||||||||| ||       ||||||||| ||||||||||||||||||    
T  23054423 aactcatccttacaaaaccgtcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagttatatctatctgatgtgggactaaatcca 23054327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 562 - 651
Target Start/End: Complemental strand, 25441793 - 25441697
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaaatcca 651  Q
    |||||||||||||||||| ||||  |||||||||||| | | ||||||||||||||||| |||       |||||||| ||||||||||||||||||    
T  25441793 aactcatccttacaaaaccggcttgtaaggtgaggagtgccccctctttataaactcttctcaagagtactatctatctgatgtgggactaaatcca 25441697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 562 - 650
Target Start/End: Complemental strand, 936909 - 936814
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt-------ttcatatctatccgatgtgggactaaatcc 650  Q
    ||||||||  |||||||||||||  || ||||||||| |||||||||||||||||||||       ||| ||||||||||||||| ||||||||||    
T  936909 aactcatctatacaaaactggcttgtacggtgaggagtgtctcctctttataaactcttctcaagattcctatctatccgatgtgagactaaatcc 936814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 562 - 650
Target Start/End: Original strand, 11349800 - 11349895
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaaatcc 650  Q
    ||||||||| ||||||| |||||  || ||||||||| | ||||||||||||||||||| |||       ||||||||||||||||||||||||||    
T  11349800 aactcatccatacaaaattggcttttacggtgaggagtgcctcctctttataaactcttctcaagaaacctatctatccgatgtgggactaaatcc 11349895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 564 - 644
Target Start/End: Complemental strand, 12431993 - 12431906
Alignment:
Q  564 ctcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggact 644  Q
    |||||||||||||||| ||||  |||||||||||  ||||||||||||||||||||| |||       ||||||||||||||||||||    
T  12431993 ctcatccttacaaaaccggcttgtaaggtgaggattgtctcctctttataaactcttctcaagagtcttatctatccgatgtgggact 12431906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 562 - 619
Target Start/End: Original strand, 25286267 - 25286324
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactct 619  Q
    |||||||||||||||||| ||||  |||||||||||| || |||||||||||||||||    
T  25286267 aactcatccttacaaaaccggcttgtaaggtgaggagtgtttcctctttataaactct 25286324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 553 - 622
Target Start/End: Complemental strand, 39108461 - 39108392
Alignment:
Q  553 atggggtcaaactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctttt 622  Q
    |||||||| |||||||||||||||||| || | ||||||||||||  ||||||||| ||||||| |||||    
T  39108461 atggggtctaactcatccttacaaaaccggtttataaggtgaggattgtctcctctatataaacactttt 39108392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 560 - 620
Target Start/End: Complemental strand, 32975350 - 32975290
Alignment:
Q  560 caaactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||||||||||||||||  |||||||||||  || ||||||||||||| ||||    
T  32975350 caaactcatccttacaaaactggcttgtaaggtgaggattgtttcctctttataaattctt 32975290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 562 - 644
Target Start/End: Original strand, 883608 - 883697
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggact 644  Q
    |||||||||||||||||| ||||  |||||||||||  | ||||||||||||||||||| |||       ||||||||||||||||||||    
T  883608 aactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtgggact 883697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 562 - 620
Target Start/End: Original strand, 8044552 - 8044611
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctc-tttataaactctt 620  Q
    ||||||||||||||||||||| | ||||||||||||| | |||||| |||||||||||||    
T  8044552 aactcatccttacaaaactggttcataaggtgaggagtgcctcctcttttataaactctt 8044611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 562 - 620
Target Start/End: Original strand, 10542070 - 10542128
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    ||||||||||||||||||  |||  |||| ||||||| |||||||||||||||||||||    
T  10542070 aactcatccttacaaaaccagcttgtaagatgaggagtgtctcctctttataaactctt 10542128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 562 - 620
Target Start/End: Original strand, 20998996 - 20999054
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||||||||| ||||  |||||||||||  | |||||||||||||||||||    
T  20998996 aactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactctt 20999054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 557 - 650
Target Start/End: Original strand, 28193577 - 28193677
Alignment:
Q  557 ggtcaaactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaaatc 649  Q
    |||| |||||||||||||||||||| ||  || ||||||||| | |||||||||||||| |||| |||       |||||||| ||||||||||||||||    
T  28193577 ggtctaactcatccttacaaaactgacttgtacggtgaggagtgcctcctctttataaaatcttctcaagaatcctatctatctgatgtgggactaaatc 28193676  T
Q  650 c 650  Q
    |    
T  28193677 c 28193677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 562 - 650
Target Start/End: Complemental strand, 10862403 - 10862308
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt-------ttcatatctatccgatgtgggactaaatcc 650  Q
    |||||| | ||||||||||||||  || ||||| ||| |||||||||||||||||||||        || ||||||||||||||||||||||||||    
T  10862403 aactcacctttacaaaactggcttgtacggtgatgagtgtctcctctttataaactcttctaaaaaatcttatctatccgatgtgggactaaatcc 10862308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 562 - 650
Target Start/End: Original strand, 11350194 - 11350289
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaaatcc 650  Q
    ||||||||| |||||||| ||||  || ||||||||| | ||||||||||||||||||| |||       |||||||||||| |||||||||||||    
T  11350194 aactcatccatacaaaaccggcttttacggtgaggagtgcctcctctttataaactcttctcaagaaacctatctatccgatatgggactaaatcc 11350289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 562 - 619
Target Start/End: Complemental strand, 30156305 - 30156248
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactct 619  Q
    |||| ||||||||||||| ||||  |||||||||||| | ||||||||||||||||||    
T  30156305 aacttatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactct 30156248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 562 - 619
Target Start/End: Complemental strand, 30160424 - 30160367
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactct 619  Q
    |||||||||||||||||| ||||  |||||| ||||| | ||||||||||||||||||    
T  30160424 aactcatccttacaaaaccggcttgtaaggtaaggagtgcctcctctttataaactct 30160367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 556 - 620
Target Start/End: Original strand, 27545117 - 27545181
Alignment:
Q  556 gggtcaaactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    ||||| |||||||||||||||||| || |  |||||||||||  | |||||||||||||||||||    
T  27545117 gggtctaactcatccttacaaaaccggtttgtaaggtgaggattgcctcctctttataaactctt 27545181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 556 - 620
Target Start/End: Complemental strand, 28895629 - 28895566
Alignment:
Q  556 gggtcaaactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    ||||| |||||||||||||||||| ||||  |||||||||||| |||| || |||||||||||||    
T  28895629 gggtctaactcatccttacaaaaccggcttgtaaggtgaggagtgtct-ctttttataaactctt 28895566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 562 - 617
Target Start/End: Original strand, 2333365 - 2333420
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaact 617  Q
    |||||| ||||||||||||||||  |||||||||||| |||| || ||||||||||    
T  2333365 aactcaaccttacaaaactggcttgtaaggtgaggagtgtcttctttttataaact 2333420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 562 - 617
Target Start/End: Original strand, 15061272 - 15061327
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaact 617  Q
    ||||||||||||||||||  |||  |||||||||||| | ||||||||||||||||    
T  15061272 aactcatccttacaaaaccagcttgtaaggtgaggagtgcctcctctttataaact 15061327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 562 - 644
Target Start/End: Complemental strand, 17727501 - 17727412
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggact 644  Q
    |||||||||||||||||| ||||  |||||||||||  | || |||||||||||||||| |||       ||||||||||||||||||||    
T  17727501 aactcatccttacaaaaccggcttgtaaggtgaggattgccttctctttataaactcttctcaagagtcttatctatccgatgtgggact 17727412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 562 - 620
Target Start/End: Original strand, 10849498 - 10849556
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    ||||||||||||||||||   ||  |||||||||||| | |||||||||||||||||||    
T  10849498 aactcatccttacaaaaccaacttgtaaggtgaggagtgcctcctctttataaactctt 10849556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 554 - 620
Target Start/End: Complemental strand, 16007082 - 16007016
Alignment:
Q  554 tggggtcaaactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    ||||||| |||||||||||||||||| ||||  |||||||||||    |||||||||||| ||||||    
T  16007082 tggggtctaactcatccttacaaaaccggcttgtaaggtgaggattacctcctctttatatactctt 16007016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 562 - 620
Target Start/End: Complemental strand, 34775454 - 34775396
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||||||||| ||||  |||||||||||  | |||||||||||||| ||||    
T  34775454 aactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaattctt 34775396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 562 - 620
Target Start/End: Original strand, 38760324 - 38760382
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||| ||||||||| ||||  |||||||| ||| | |||||||||||||||||||    
T  38760324 aactcatcgttacaaaaccggcttgtaaggtgacgagtgcctcctctttataaactctt 38760382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 562 - 619
Target Start/End: Complemental strand, 902020 - 901963
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactct 619  Q
    |||||||||||||||||| ||||  |||||||||||| |  ||||||| |||||||||    
T  902020 aactcatccttacaaaaccggcttgtaaggtgaggagtgcttcctcttcataaactct 901963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 2e-17; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 562 - 651
Target Start/End: Complemental strand, 18905953 - 18905857
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaaatcca 651  Q
    |||||||||||||||||| ||||  |||||||||||| | ||||||||||||||||||| |||       |||||||||||||||||||||||||||    
T  18905953 aactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgctatctatccgatgtgggactaaatcca 18905857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 562 - 651
Target Start/End: Complemental strand, 32931498 - 32931402
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttc-------atatctatccgatgtgggactaaatcca 651  Q
    |||||||||||||||||| ||||  |||||||||||| | ||||||||||||||||||| ||       ||||||||||||||||||||||||||||    
T  32931498 aactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagaatgatatctatccgatgtgggactaaatcca 32931402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 562 - 671
Target Start/End: Original strand, 39588091 - 39588210
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataa---actcttttca-------tatctatccgatgtgggactaaatcca 651  Q
    |||||||||||||||||| |||| ||||||||||||| | |||||||||||||   |||||| |||       |||||||| | ||||||||||||||||    
T  39588091 aactcatccttacaaaaccggcttataaggtgaggagtgcctcctctttataaactactcttctcaaaaatcctatctatctgttgtgggactaaatcca 39588190  T
Q  652 tatagtgttggctgctaaca 671  Q
    |  |||||||||||||||||    
T  39588191 ttgagtgttggctgctaaca 39588210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 562 - 651
Target Start/End: Complemental strand, 34248174 - 34248078
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaaatcca 651  Q
    |||||||||||||||||| ||||  |||||||||||| | ||||||||||||||||||| |||       |||||| ||||||||||||||||||||    
T  34248174 aactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttatcaagagtcctatctaaccgatgtgggactaaatcca 34248078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 562 - 651
Target Start/End: Original strand, 21085155 - 21085251
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaaatcca 651  Q
    |||||||| |||||||||  |||  |||||||||||| | ||||||||||||||||||| |||       |||||||||||||||||||||||||||    
T  21085155 aactcatcattacaaaaccagcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgctatctatccgatgtgggactaaatcca 21085251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 562 - 651
Target Start/End: Complemental strand, 21653424 - 21653328
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaaatcca 651  Q
    |||||||||||||||||| ||||  ||||||||| || | ||||||| ||||||||||| |||       |||||||||||||||||||||||||||    
T  21653424 aactcatccttacaaaaccggcttgtaaggtgagaagtgcctcctctatataaactcttctcaagagcactatctatccgatgtgggactaaatcca 21653328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 562 - 651
Target Start/End: Complemental strand, 21653901 - 21653805
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaaatcca 651  Q
    |||||||||||||||||| ||||  |||||||||||| | ||||||| |||||||| || |||       |||||||||||||||||||||||||||    
T  21653901 aactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctgtataaacttttctcaagagcactatctatccgatgtgggactaaatcca 21653805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 562 - 620
Target Start/End: Complemental strand, 22277621 - 22277563
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||||||||| ||||  ||||||||| || |||||||||||||||||||||    
T  22277621 aactcatccttacaaaaccggcttgtaaggtgagtagtgtctcctctttataaactctt 22277563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 562 - 620
Target Start/End: Complemental strand, 34248456 - 34248398
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||||||||| ||||  |||||||||||| | |||||||||||||||||||    
T  34248456 aactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactctt 34248398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 562 - 620
Target Start/End: Complemental strand, 36997263 - 36997205
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||||||||| ||||  |||||||||||| | |||||||||||||||||||    
T  36997263 aactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactctt 36997205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 562 - 650
Target Start/End: Complemental strand, 14019905 - 14019810
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaaatcc 650  Q
    |||||||||||||||||| ||||  |  ||||||||| | ||||||||||||||||||| |||       ||||||||||||||||||||||||||    
T  14019905 aactcatccttacaaaaccggcttgttcggtgaggagtgcctcctctttataaactcttctcaagaaacctatctatccgatgtgggactaaatcc 14019810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 562 - 671
Target Start/End: Original strand, 17607221 - 17607338
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt-------ttcatatctatccgatgtgggactaaatcca-ta 653  Q
    |||||||||||||||||||||||  || |||||| || | |||||||||||||||||||        || ||||||||||||||| ||||||||||| |     
T  17607221 aactcatccttacaaaactggcttgtacggtgagtagtgcctcctctttataaactcttcacaagaatcctatctatccgatgtgagactaaatccactc 17607320  T
Q  654 tagtgttggctgctaaca 671  Q
     ||||||||| |||||||    
T  17607321 gagtgttggccgctaaca 17607338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 562 - 644
Target Start/End: Complemental strand, 43599408 - 43599319
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggact 644  Q
    |||||||||||||||||| ||||  |||||||||||  | ||||||||||||||||||| |||       ||||||||||||||||||||    
T  43599408 aactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtgggact 43599319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 562 - 620
Target Start/End: Original strand, 10989041 - 10989099
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||||||||| ||||  |||||||||||  | |||||||||||||||||||    
T  10989041 aactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactctt 10989099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 562 - 620
Target Start/End: Original strand, 10989248 - 10989306
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||||||||| ||||  |||||||||||  | |||||||||||||||||||    
T  10989248 aactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactctt 10989306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 562 - 620
Target Start/End: Original strand, 15011036 - 15011094
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||||||||| ||||  |||||||||||  | |||||||||||||||||||    
T  15011036 aactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactctt 15011094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 562 - 620
Target Start/End: Complemental strand, 39125021 - 39124963
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    ||||||| |||||||||||||||  |||| ||||||| | |||||||||||||||||||    
T  39125021 aactcattcttacaaaactggcttgtaagatgaggagtgcctcctctttataaactctt 39124963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 554 - 620
Target Start/End: Complemental strand, 42228876 - 42228810
Alignment:
Q  554 tggggtcaaactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    ||||||| |||||||||||||||||  ||||  |||||||||||  | |||||||||||||||||||    
T  42228876 tggggtctaactcatccttacaaaatcggcttgtaaggtgaggattgcctcctctttataaactctt 42228810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 562 - 650
Target Start/End: Complemental strand, 35908775 - 35908680
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaaatcc 650  Q
    |||||||||||||||||| ||||  || ||||||||| | || |||||||||||||||| |||       |||||| |||||||||||||||||||    
T  35908775 aactcatccttacaaaaccggcttgtacggtgaggagtgccttctctttataaactcttctcaagtatcctatctacccgatgtgggactaaatcc 35908680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 554 - 619
Target Start/End: Complemental strand, 36037295 - 36037230
Alignment:
Q  554 tggggtcaaactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactct 619  Q
    ||||||| |||||||||||||||||| ||||  | |||||||||| |  |||||||||||||||||    
T  36037295 tggggtctaactcatccttacaaaaccggcttgtgaggtgaggagtgcatcctctttataaactct 36037230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 571 - 671
Target Start/End: Original strand, 39587874 - 39587981
Alignment:
Q  571 ttacaaaactggctaataaggtgaggagagtctcctctttataaactctt-------ttcatatctatccgatgtgggactaaatccatatagtgttggc 663  Q
    ||||||||| |||| ||||||||||||| |  ||||||||||||||||||        || |||| ||| ||||||||||||||||||   |||||||||    
T  39587874 ttacaaaaccggcttataaggtgaggagtgcttcctctttataaactcttctctagaatcctatccatctgatgtgggactaaatccactgagtgttggc 39587973  T
Q  664 tgctaaca 671  Q
    ||||||||    
T  39587974 tgctaaca 39587981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 562 - 619
Target Start/End: Original strand, 43984323 - 43984380
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactct 619  Q
    |||||||||||||||||| ||||  || ||||||||| | ||||||||||||||||||    
T  43984323 aactcatccttacaaaaccggcttgtatggtgaggagtgcctcctctttataaactct 43984380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 562 - 644
Target Start/End: Complemental strand, 8559678 - 8559589
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggact 644  Q
    |||||||||||||||||| ||||  |||||||||||  | |||||||||||| |||||| |||       ||||||||||||||||||||    
T  8559678 aactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatctatccgatgtgggact 8559589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 562 - 620
Target Start/End: Original strand, 3183918 - 3183976
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||| ||||||||| ||||  |||||||||||  | |||||||||||||||||||    
T  3183918 aactcatcgttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactctt 3183976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 562 - 620
Target Start/End: Original strand, 16454642 - 16454700
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||||||||| ||||  |||||||||||  | |||||||||||| ||||||    
T  16454642 aactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactctt 16454700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 562 - 620
Target Start/End: Original strand, 20298523 - 20298581
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||| |||||||||  |||  |||||||||||| | |||||||||||||||||||    
T  20298523 aactcatcattacaaaaccagcttgtaaggtgaggagtgcctcctctttataaactctt 20298581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 562 - 620
Target Start/End: Complemental strand, 35561555 - 35561497
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||||||||| |||| | ||||||||||    |||||||||||||||||||    
T  35561555 aactcatccttacaaaaccggcttacaaggtgaggattacctcctctttataaactctt 35561497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 555 - 644
Target Start/End: Complemental strand, 35561770 - 35561674
Alignment:
Q  555 ggggtcaaactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggact 644  Q
    |||||| |||||||||||||||||| |||    ||||||||||  | ||||||||||||||||||| |||       ||||||||||||||||||||    
T  35561770 ggggtctaactcatccttacaaaaccggcatgcaaggtgaggattgcctcctctttataaactcttctcaagaatcttatctatccgatgtgggact 35561674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 562 - 612
Target Start/End: Original strand, 36993954 - 36994004
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttat 612  Q
    |||||||||||||||||| ||||  |||||||||||| | |||||||||||    
T  36993954 aactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttat 36994004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 562 - 620
Target Start/End: Original strand, 38287971 - 38288029
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    ||||||||||||||||||  |||  || |||||| || |||||||||||||||||||||    
T  38287971 aactcatccttacaaaaccagcttgtacggtgagtagtgtctcctctttataaactctt 38288029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 562 - 620
Target Start/End: Original strand, 40902400 - 40902458
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||| ||||||||||||| ||||  |||||||||||  | |||||||||||||||||||    
T  40902400 aacttatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactctt 40902458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 622 - 671
Target Start/End: Complemental strand, 14582260 - 14582211
Alignment:
Q  622 tcatatctatccgatgtgggactaaatccatatagtgttggctgctaaca 671  Q
    |||||| ||||  |||||||||||||||||  ||||||||||||||||||    
T  14582260 tcatatttatcaaatgtgggactaaatccacttagtgttggctgctaaca 14582211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 562 - 615
Target Start/End: Complemental strand, 22451445 - 22451392
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaa 615  Q
    |||||||||||||||||| ||||  | ||||||| || ||||||||||||||||    
T  22451445 aactcatccttacaaaaccggcttgtgaggtgagaagtgtctcctctttataaa 22451392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 562 - 619
Target Start/End: Original strand, 30176471 - 30176528
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactct 619  Q
    |||||||||||||||||| ||||  | |||||| ||| | ||||||||||||||||||    
T  30176471 aactcatccttacaaaaccggcttgtgaggtgaagagtgcctcctctttataaactct 30176528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 554 - 619
Target Start/End: Original strand, 36039793 - 36039858
Alignment:
Q  554 tggggtcaaactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactct 619  Q
    ||||||| |||||||||||||||||| ||||  | ||||||| || |  |||||||||||||||||    
T  36039793 tggggtctaactcatccttacaaaaccggcttgtgaggtgagtagtgcatcctctttataaactct 36039858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 2e-17; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 562 - 651
Target Start/End: Complemental strand, 8144114 - 8144018
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaaatcca 651  Q
    |||||||||||||||||| ||||  |||||||||||| | ||||||||||||||||||| |||       |||||||||||||||||||||||||||    
T  8144114 aactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgctatctatccgatgtgggactaaatcca 8144018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 562 - 624
Target Start/End: Original strand, 1744849 - 1744911
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca 624  Q
    |||||||||||||||||| ||||  |||||||||||| | |||||||||||||||||||||||    
T  1744849 aactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttttca 1744911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 562 - 651
Target Start/End: Original strand, 10418345 - 10418441
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaaatcca 651  Q
    |||||||||||||||||| ||||  |||||||||||| | ||||||||||||||||||  |||       |||||||||||||||||||||||||||    
T  10418345 aactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactctcatcaagagtgctatctatccgatgtgggactaaatcca 10418441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 562 - 620
Target Start/End: Original strand, 10733445 - 10733503
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||||||||| ||||  |||||||||||| |||||||||||||||||||||    
T  10733445 aactcatccttacaaaaccggcttgtaaggtgaggagtgtctcctctttataaactctt 10733503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 562 - 651
Target Start/End: Original strand, 24055116 - 24055212
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaaatcca 651  Q
    |||||||||||||||||| ||||  |||||||||||| | ||| ||||||||||||||| |||       |||||||||||||||||||||||||||    
T  24055116 aactcatccttacaaaaccggcttgtaaggtgaggagtgcctcgtctttataaactcttctcaagagtgctatctatccgatgtgggactaaatcca 24055212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 562 - 651
Target Start/End: Original strand, 12134490 - 12134586
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaaatcca 651  Q
    |||||||||||||||||| || |  |||||| ||||| ||||||||||||||||||||| |||       |||||||||||||||||||||| ||||    
T  12134490 aactcatccttacaaaaccggtttgtaaggttaggagtgtctcctctttataaactcttctcaagagtgctatctatccgatgtgggactaagtcca 12134586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 562 - 651
Target Start/End: Complemental strand, 19054590 - 19054494
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaaatcca 651  Q
    |||||||||||||||||| ||||  |||||||||||| | ||| ||||||||||||||| |||       |||||||||||||||||||||| ||||    
T  19054590 aactcatccttacaaaaccggcttgtaaggtgaggagtgcctcatctttataaactcttctcaagagtgttatctatccgatgtgggactaattcca 19054494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 565 - 648
Target Start/End: Complemental strand, 30539329 - 30539239
Alignment:
Q  565 tcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaaat 648  Q
    ||||||||||||||| ||||  |||||||||||| |||||  |||||||||||||| |||       ||||||||||||||||||||||||    
T  30539329 tcatccttacaaaaccggcttgtaaggtgaggagtgtctcgcctttataaactcttatcaagagtcttatctatccgatgtgggactaaat 30539239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 562 - 617
Target Start/End: Complemental strand, 25999120 - 25999065
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaact 617  Q
    ||||||| |||||||||| || | ||||||||||||| ||||||||||||||||||    
T  25999120 aactcattcttacaaaaccggttcataaggtgaggagtgtctcctctttataaact 25999065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 562 - 617
Target Start/End: Complemental strand, 26098439 - 26098384
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaact 617  Q
    |||||||||||||||||  || | ||||||||||||| ||||||||||||||||||    
T  26098439 aactcatccttacaaaagcggttcataaggtgaggagtgtctcctctttataaact 26098384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 562 - 617
Target Start/End: Complemental strand, 26098851 - 26098796
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaact 617  Q
    ||||||| |||||||||| || | ||||||||||||| ||||||||||||||||||    
T  26098851 aactcattcttacaaaaccggttcataaggtgaggagtgtctcctctttataaact 26098796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 562 - 651
Target Start/End: Original strand, 31880 - 31976
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaaatcca 651  Q
    |||| ||||||||||||||||||  |||| ||||||| | ||| ||||||||||||||| |||       |||||||||||||| ||||||||||||    
T  31880 aactaatccttacaaaactggcttgtaagttgaggagtgcctcgtctttataaactcttatcaagagtcttatctatccgatgttggactaaatcca 31976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 562 - 620
Target Start/End: Original strand, 11313389 - 11313447
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||||||||||||||  |||||||||||  | |||||||||||| ||||||    
T  11313389 aactcatccttacaaaactggcttgtaaggtgaggattgcctcctctttatatactctt 11313447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 562 - 620
Target Start/End: Original strand, 15101118 - 15101176
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||||||||| ||||  |||||||||||  | |||||||||||||||||||    
T  15101118 aactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactctt 15101176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 562 - 620
Target Start/End: Original strand, 16877017 - 16877075
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||||||||| ||||  |||||||||||  | |||||||||||||||||||    
T  16877017 aactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactctt 16877075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 554 - 620
Target Start/End: Original strand, 17096697 - 17096763
Alignment:
Q  554 tggggtcaaactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    ||||||| |||||||||||||||||| ||||  || || ||||||  ||||||||||||||||||||    
T  17096697 tggggtctaactcatccttacaaaaccggcttgtacggcgaggagtttctcctctttataaactctt 17096763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 562 - 620
Target Start/End: Complemental strand, 24558885 - 24558827
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    ||||||||||||||||||  |||  |||||||||||  |||||||||||||||||||||    
T  24558885 aactcatccttacaaaaccagcttgtaaggtgaggattgtctcctctttataaactctt 24558827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 562 - 620
Target Start/End: Complemental strand, 28149890 - 28149832
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||||||||| ||||  |||||||||||  | |||||||||||||||||||    
T  28149890 aactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactctt 28149832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 562 - 619
Target Start/End: Complemental strand, 1469058 - 1469001
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactct 619  Q
    |||||||||||||||||| ||||  ||||| |||||| |||||||||||||| |||||    
T  1469058 aactcatccttacaaaaccggcttgtaaggcgaggagtgtctcctctttatatactct 1469001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 562 - 619
Target Start/End: Original strand, 27914333 - 27914390
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactct 619  Q
    |||||||||||||||||| ||||  |||||| ||||| | ||||||||||||||||||    
T  27914333 aactcatccttacaaaaccggcttgtaaggtaaggagtgcctcctctttataaactct 27914390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 556 - 620
Target Start/End: Original strand, 5269274 - 5269338
Alignment:
Q  556 gggtcaaactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    ||||| |||||||||||||||||| ||||  |||||||||||  | || ||||||||||||||||    
T  5269274 gggtctaactcatccttacaaaaccggcttgtaaggtgaggattgccttctctttataaactctt 5269338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 562 - 618
Target Start/End: Original strand, 17147912 - 17147968
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactc 618  Q
    |||||||||||||||||| ||||  |||||||||||  | |||||||||||||||||    
T  17147912 aactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactc 17147968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 565 - 617
Target Start/End: Complemental strand, 25998911 - 25998859
Alignment:
Q  565 tcatccttacaaaactggctaataaggtgaggagagtctcctctttataaact 617  Q
    ||||||||||||||  || | ||||||||||||| ||||||||||||||||||    
T  25998911 tcatccttacaaaagcggttcataaggtgaggagtgtctcctctttataaact 25998859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 562 - 617
Target Start/End: Original strand, 16876837 - 16876892
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaact 617  Q
    |||||||||||||||||| ||||  |||||||||||  | ||||||||||||||||    
T  16876837 aactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaact 16876892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 562 - 617
Target Start/End: Complemental strand, 26098645 - 26098590
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaact 617  Q
    ||||||| |||||||||  || | ||||||||||||| ||||||||||||||||||    
T  26098645 aactcattcttacaaaagcggttcataaggtgaggagtgtctcctctttataaact 26098590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 554 - 620
Target Start/End: Complemental strand, 16590289 - 16590223
Alignment:
Q  554 tggggtcaaactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    ||||||| |||||||||||||||||| ||||  ||| |||||||  | |||||||||||||| ||||    
T  16590289 tggggtctaactcatccttacaaaaccggcttgtaaagtgaggattgcctcctctttataaattctt 16590223  T

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Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 554 - 620
Target Start/End: Original strand, 16605091 - 16605157
Alignment:
Q  554 tggggtcaaactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    ||||||| |||||||||||||||||| ||||  ||| |||||||  | |||||||||||||| ||||    
T  16605091 tggggtctaactcatccttacaaaaccggcttgtaaagtgaggattgcctcctctttataaattctt 16605157  T

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Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 562 - 620
Target Start/End: Original strand, 19712616 - 19712674
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    ||||||||||||||||||  |||  |||||||||||  | |||||||||||||||||||    
T  19712616 aactcatccttacaaaaccagcttgtaaggtgaggattgcctcctctttataaactctt 19712674  T

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Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 562 - 620
Target Start/End: Original strand, 19753611 - 19753669
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||||| ||| | ||  |||||||||||| |||| ||||||||||||||||    
T  19753611 aactcatccttacagaaccgtcttgtaaggtgaggagtgtcttctctttataaactctt 19753669  T

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Target: chr5 (Bit Score: 47; Significance: 2e-17; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 562 - 651
Target Start/End: Complemental strand, 38131861 - 38131765
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaaatcca 651  Q
    |||||||||||||||||| ||||  |||||||||||  ||||||||||||||||||||| |||       |||||||||||||||||||||||||||    
T  38131861 aactcatccttacaaaaccggcttgtaaggtgaggaatgtctcctctttataaactcttctcaagagtcctatctatccgatgtgggactaaatcca 38131765  T

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Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 562 - 651
Target Start/End: Complemental strand, 13843794 - 13843698
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaaatcca 651  Q
    |||||||||||||||||| ||||  |||||||||||| | ||||||||||||||||||| |||       |||||||| ||||||||||||||||||    
T  13843794 aactcatccttacaaaaccggcttgtaaggtgaggagcgcctcctctttataaactcttctcaagagtactatctatctgatgtgggactaaatcca 13843698  T

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Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 562 - 651
Target Start/End: Original strand, 37995641 - 37995737
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaaatcca 651  Q
    |||||||||||||||||| ||||  |||||||||||  | ||||||||||||||||||| |||       |||||||||||||||||||||||||||    
T  37995641 aactcatccttacaaaaccggcttgtaaggtgaggaatgcctcctctttataaactcttctcaagagtgctatctatccgatgtgggactaaatcca 37995737  T

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Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 562 - 650
Target Start/End: Original strand, 22196333 - 22196428
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaaatcc 650  Q
    |||||||||||||||||| ||||  || ||||||||| | ||||||||||||||||||| |||       ||||||||||||||||||||||||||    
T  22196333 aactcatccttacaaaaccggcttttacggtgaggagtgcctcctctttataaactcttctcaagagtactatctatccgatgtgggactaaatcc 22196428  T

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Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 562 - 650
Target Start/End: Original strand, 22196560 - 22196655
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt-------ttcatatctatccgatgtgggactaaatcc 650  Q
    |||||||||||||||||| ||||  || ||||| ||| |||||||||||||||||||||        |||||||||||||||||||||||||||||    
T  22196560 aactcatccttacaaaaccggcttgtacggtgatgagtgtctcctctttataaactcttctcaagagtcatatctatccgatgtgggactaaatcc 22196655  T

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Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 562 - 671
Target Start/End: Original strand, 2471700 - 2471817
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaaat-ccata 653  Q
    ||||||||| |||||||| ||||  || ||||||||| | ||||||||||||||||||| |||       |||||||||||||||||||||||| || |     
T  2471700 aactcatccatacaaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaaaaaccctatctatccgatgtgggactaaatcccctc 2471799  T
Q  654 tagtgttggctgctaaca 671  Q
     |||||||||||||||||    
T  2471800 gagtgttggctgctaaca 2471817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 562 - 617
Target Start/End: Complemental strand, 2716440 - 2716385
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaact 617  Q
    ||||||||||||||||||  ||| ||||||||||||| ||||||||||||||||||    
T  2716440 aactcatccttacaaaaccagcttataaggtgaggagtgtctcctctttataaact 2716385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 562 - 644
Target Start/End: Complemental strand, 38376828 - 38376739
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggact 644  Q
    |||||||||||||||||| ||||  |||||||||||  ||||||||||||||||||||| |||       ||||||||||||||||||||    
T  38376828 aactcatccttacaaaaccggcttgtaaggtgaggattgtctcctctttataaactcttctcaagagtcttatctatccgatgtgggact 38376739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 562 - 620
Target Start/End: Complemental strand, 2716643 - 2716585
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||||||||| |||| ||||||||||||| | |||||| ||||||||||||    
T  2716643 aactcatccttacaaaaccggcttataaggtgaggagtgcctcctccttataaactctt 2716585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 562 - 620
Target Start/End: Original strand, 28358042 - 28358100
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||||||||| ||||  |||||||||||  |||||||||||||||||||||    
T  28358042 aactcatccttacaaaaccggcttgtaaggtgaggattgtctcctctttataaactctt 28358100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 562 - 671
Target Start/End: Original strand, 14769839 - 14769956
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaaatcca-ta 653  Q
    ||||||||||| |||||| ||||  || ||||||||| ||||| ||||||||||||||| |||       ||||||||||||||| ||||||||||| |     
T  14769839 aactcatcctttcaaaaccggcttgtacggtgaggagtgtctcgtctttataaactcttctcaagaatcctatctatccgatgtgagactaaatccactc 14769938  T
Q  654 tagtgttggctgctaaca 671  Q
     ||||||||| |||||||    
T  14769939 gagtgttggccgctaaca 14769956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 565 - 624
Target Start/End: Complemental strand, 33040157 - 33040098
Alignment:
Q  565 tcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca 624  Q
    ||||||||||||||| ||||  |||||||||||| | ||||||| |||||||||||||||    
T  33040157 tcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctatataaactcttttca 33040098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 562 - 644
Target Start/End: Original strand, 35526995 - 35527084
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggact 644  Q
    |||||||||||||||||| ||||  |||||||||||  | ||||||||||||||||||| |||       ||||||||||||||||||||    
T  35526995 aactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtgggact 35527084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 562 - 620
Target Start/End: Original strand, 48111 - 48169
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||||||||| ||||  |||||||||||  | |||||||||||||||||||    
T  48111 aactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactctt 48169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 562 - 620
Target Start/End: Complemental strand, 11632528 - 11632470
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||||||||| |||| ||||||||||||  | ||| |||||||||||||||    
T  11632528 aactcatccttacaaaaccggcttataaggtgaggattgcctcatctttataaactctt 11632470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 562 - 620
Target Start/End: Complemental strand, 13413681 - 13413623
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||||||||| ||||  |||||||||||  | |||||||||||||||||||    
T  13413681 aactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactctt 13413623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 554 - 620
Target Start/End: Complemental strand, 18107938 - 18107872
Alignment:
Q  554 tggggtcaaactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    ||||||| || ||||||||||||||| || | ||||||||||||| | |||||||||||||| ||||    
T  18107938 tggggtctaattcatccttacaaaaccggtttataaggtgaggagtgcctcctctttataaattctt 18107872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 562 - 620
Target Start/End: Complemental strand, 24918258 - 24918200
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||||||||| ||||  ||||||||| || | |||||||||||||||||||    
T  24918258 aactcatccttacaaaaccggcttgtaaggtgagtagtgcctcctctttataaactctt 24918200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 562 - 620
Target Start/End: Complemental strand, 24994166 - 24994108
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||||||||| ||||  ||||||||| || | |||||||||||||||||||    
T  24994166 aactcatccttacaaaaccggcttgtaaggtgagtagtgcctcctctttataaactctt 24994108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 562 - 620
Target Start/End: Complemental strand, 29432509 - 29432451
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||||||||| ||||  ||||||||| || | |||||||||||||||||||    
T  29432509 aactcatccttacaaaaccggcttgtaaggtgagaagtgcctcctctttataaactctt 29432451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 562 - 620
Target Start/End: Complemental strand, 38663344 - 38663286
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||||||||| ||||  |||||||| ||| | |||||||||||||||||||    
T  38663344 aactcatccttacaaaaccggcttgtaaggtgacgagtgcctcctctttataaactctt 38663286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 553 - 666
Target Start/End: Original strand, 39668415 - 39668535
Alignment:
Q  553 atggggtcaaactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggacta 645  Q
    |||||| | |||||||||||||||||| |||| ||| | |  || ||| |||||||||||||| |||| |||       |||||||||||||||||||||    
T  39668415 atggggcccaactcatccttacaaaaccggcttatatgttttggggagcctcctctttataaattcttctcaagaatcatatctatccgatgtgggacta 39668514  T
Q  646 aatccatatagtgttggctgc 666  Q
    ||||||   ||||||||||||    
T  39668515 aatccactgagtgttggctgc 39668535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 562 - 650
Target Start/End: Original strand, 84041 - 84136
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaaatcc 650  Q
    ||||||||| |||||||| ||||  || ||||||||| | ||||||||||||||||||| |||       ||| ||||||||||||||||||||||    
T  84041 aactcatccatacaaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaagaatcctatatatccgatgtgggactaaatcc 84136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 562 - 615
Target Start/End: Original strand, 1892097 - 1892150
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaa 615  Q
    |||||||||||||||||| ||||  |||||||||||| | ||||||||||||||    
T  1892097 aactcatccttacaaaaccggcttgtaaggtgaggagggcctcctctttataaa 1892150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 562 - 619
Target Start/End: Original strand, 12965253 - 12965310
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactct 619  Q
    |||||||||||||||||| ||||  |||||||||||| |  |||||||||||||||||    
T  12965253 aactcatccttacaaaaccggcttgtaaggtgaggagtgcttcctctttataaactct 12965310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 562 - 615
Target Start/End: Original strand, 17016100 - 17016153
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaa 615  Q
    ||||||||||||||||||| |||  |||||||||||| || |||||||||||||    
T  17016100 aactcatccttacaaaactagcttgtaaggtgaggagtgtatcctctttataaa 17016153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 557 - 617
Target Start/End: Original strand, 24792124 - 24792184
Alignment:
Q  557 ggtcaaactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaact 617  Q
    |||| ||||||| |||||||||| ||||  || ||||||||| ||||||||||||||||||    
T  24792124 ggtctaactcattcttacaaaaccggcttgtacggtgaggagtgtctcctctttataaact 24792184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 565 - 644
Target Start/End: Complemental strand, 28156124 - 28156044
Alignment:
Q  565 tcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactct-tttcatatctatccgatgtgggact 644  Q
    ||||||||||||||| ||||  |||||||||||  | ||||||||||||||||||   || | ||||||||||||||||||    
T  28156124 tcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactctgagtcttgtctatccgatgtgggact 28156044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 562 - 617
Target Start/End: Original strand, 48318 - 48373
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaact 617  Q
    |||||||||||||||||| ||||  |||||||||||  | ||||||||||||||||    
T  48318 aactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaact 48373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 562 - 617
Target Start/End: Original strand, 2908569 - 2908624
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaact 617  Q
    |||||||||||||||||| ||||  |||||||||||  | ||||||||||||||||    
T  2908569 aactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaact 2908624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 562 - 617
Target Start/End: Original strand, 2908776 - 2908831
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaact 617  Q
    |||||||||||||||||| ||||  |||||||||||  | ||||||||||||||||    
T  2908776 aactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaact 2908831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 565 - 620
Target Start/End: Complemental strand, 36878420 - 36878365
Alignment:
Q  565 tcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||||| |||||  |||||||||||  ||||||| |||||||||||||    
T  36878420 tcatccttacaaaattggcttgtaaggtgaggattgtctcctgtttataaactctt 36878365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 553 - 620
Target Start/End: Original strand, 37656730 - 37656797
Alignment:
Q  553 atggggtcaaactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||| | |||||||||||||||||| ||||  |||||||||||  | |||||||||||| ||||||    
T  37656730 atggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactctt 37656797  T

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Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 562 - 620
Target Start/End: Complemental strand, 3763003 - 3762945
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||||||||| ||||  |||||||| ||  | |||||||||||||||||||    
T  3763003 aactcatccttacaaaaccggcttgtaaggtgaagattgcctcctctttataaactctt 3762945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 562 - 620
Target Start/End: Original strand, 4465192 - 4465250
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    ||||||||||||||||||  |||  |||||||||||| ||||||||||  |||||||||    
T  4465192 aactcatccttacaaaaccagcttttaaggtgaggagtgtctcctcttagtaaactctt 4465250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 570 - 620
Target Start/End: Complemental strand, 10668449 - 10668399
Alignment:
Q  570 cttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    ||||||||||  ||| ||||||||||||| ||||||||||| |||||||||    
T  10668449 cttacaaaaccagcttataaggtgaggagtgtctcctctttgtaaactctt 10668399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 554 - 620
Target Start/End: Original strand, 20720549 - 20720615
Alignment:
Q  554 tggggtcaaactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    ||||||| |||||||||||||||||| ||||  ||| |||||||| | ||||| |||| ||||||||    
T  20720549 tggggtctaactcatccttacaaaaccggcttgtaaagtgaggagtgcctcctttttacaaactctt 20720615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 554 - 620
Target Start/End: Complemental strand, 24125167 - 24125101
Alignment:
Q  554 tggggtcaaactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    ||||||| |||||||||||||||||| ||||  |||||||||||    |||||||||||| ||||||    
T  24125167 tggggtctaactcatccttacaaaaccggcttgtaaggtgaggattacctcctctttatatactctt 24125101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 562 - 620
Target Start/End: Complemental strand, 34457193 - 34457135
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||||||||| ||||  |||||||||||  |  ||||||||||||||||||    
T  34457193 aactcatccttacaaaaccggcttgtaaggtgaggattgcatcctctttataaactctt 34457135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 562 - 620
Target Start/End: Original strand, 35527281 - 35527339
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||||||||| ||||  |||||||||||  | ||||||||| |||||||||    
T  35527281 aactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttgtaaactctt 35527339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 622 - 671
Target Start/End: Complemental strand, 17584389 - 17584341
Alignment:
Q  622 tcatatctatccgatgtgggactaaatccatatagtgttggctgctaaca 671  Q
    |||||||||||| |||||| ||||||||||  ||||||||||||||||||    
T  17584389 tcatatctatccaatgtgg-actaaatccacttagtgttggctgctaaca 17584341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 554 - 615
Target Start/End: Complemental strand, 27760480 - 27760419
Alignment:
Q  554 tggggtcaaactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaa 615  Q
    ||||||| |||||||||||||||||| ||||   ||||||||||| | ||| ||||||||||    
T  27760480 tggggtctaactcatccttacaaaaccggcttggaaggtgaggagtgcctcttctttataaa 27760419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 2e-17; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 554 - 651
Target Start/End: Complemental strand, 991309 - 991205
Alignment:
Q  554 tggggtcaaactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaa 646  Q
    ||||||| |||||||||||||||||| ||||  |||||||||||| | |||||| |||||||||||| |||       ||||||||||||||||||||||    
T  991309 tggggtctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctcattataaactcttctcaagagtgttatctatccgatgtgggactaa 991210  T
Q  647 atcca 651  Q
    |||||    
T  991209 atcca 991205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 562 - 651
Target Start/End: Original strand, 29669370 - 29669466
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaaatcca 651  Q
    |||||||||||||||||| ||||  |||||||||||| | ||||||||||||||||||| |||       |||||||||||||||||||||||||||    
T  29669370 aactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgctatctatccgatgtgggactaaatcca 29669466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 562 - 651
Target Start/End: Complemental strand, 53740279 - 53740183
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaaatcca 651  Q
    |||||||||||||||||| ||||  |||||||||||| | ||||||||||||||||||| |||       |||||||||||||||||||||||||||    
T  53740279 aactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtactatctatccgatgtgggactaaatcca 53740183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 562 - 650
Target Start/End: Complemental strand, 51470580 - 51470485
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaaatcc 650  Q
    |||||||||||||||||| ||||  |||||||||||||| |||||| |||||||||||| |||       ||||||||||||||||||||||||||    
T  51470580 aactcatccttacaaaaccggcttgtaaggtgaggagagcctcctccttataaactcttctcaagagtcctatctatccgatgtgggactaaatcc 51470485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 554 - 617
Target Start/End: Original strand, 10390474 - 10390537
Alignment:
Q  554 tggggtcaaactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaact 617  Q
    ||||||| ||||||||||||||||||||| | ||||||||||||  ||||||||||||||||||    
T  10390474 tggggtctaactcatccttacaaaactggttcataaggtgaggaatgtctcctctttataaact 10390537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 562 - 651
Target Start/End: Complemental strand, 15665250 - 15665154
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaaatcca 651  Q
    |||||||||||||||||| ||||  |||||||||||| | ||||||| ||||||||||| |||       |||||||||||||||||||||||||||    
T  15665250 aactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctatataaactcttctcaagagtcctatctatccgatgtgggactaaatcca 15665154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 562 - 651
Target Start/End: Original strand, 27048415 - 27048511
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt-------ttcatatctatccgatgtgggactaaatcca 651  Q
    |||||||||||||||||| ||||  |||||||||||| | |||||||||||||||||||       ||| |||||| ||||||||||||||||||||    
T  27048415 aactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttatcaagcttcctatctaaccgatgtgggactaaatcca 27048511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 562 - 651
Target Start/End: Original strand, 29669685 - 29669781
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaaatcca 651  Q
    |||||||||||||||||| ||||  |||||||||||| | ||||||||||||||||||| |||       |||||||| ||||||||||||||||||    
T  29669685 aactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgctatctatctgatgtgggactaaatcca 29669781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 562 - 651
Target Start/End: Complemental strand, 51469578 - 51469482
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaaatcca 651  Q
    |||||||||||||| ||| ||||  |||||||||||| | ||||||||||||||||||| |||       |||||||||||||||||||||||||||    
T  51469578 aactcatccttacacaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtcctatctatccgatgtgggactaaatcca 51469482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 557 - 617
Target Start/End: Complemental strand, 53864007 - 53863947
Alignment:
Q  557 ggtcaaactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaact 617  Q
    |||| |||||||||||||||||| || | ||||||||||||| ||||||||||||||||||    
T  53864007 ggtctaactcatccttacaaaaccggttcataaggtgaggagtgtctcctctttataaact 53863947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 562 - 648
Target Start/End: Complemental strand, 990644 - 990551
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaaat 648  Q
    |||||||||||||||||| | ||  |||||||||||| | ||||||||||||||||||| |||       ||||||||||||||||||||||||    
T  990644 aactcatccttacaaaaccgacttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgttatctatccgatgtgggactaaat 990551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 562 - 617
Target Start/End: Original strand, 10390683 - 10390738
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaact 617  Q
    |||||||||||| |||||||| | ||||||||||||| ||||||||||||||||||    
T  10390683 aactcatccttataaaactggttgataaggtgaggagtgtctcctctttataaact 10390738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 565 - 620
Target Start/End: Original strand, 53738218 - 53738273
Alignment:
Q  565 tcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    ||||||||||||||||||||  |||||||| ||| |||||||||||||||||||||    
T  53738218 tcatccttacaaaactggcttgtaaggtgacgagtgtctcctctttataaactctt 53738273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 562 - 651
Target Start/End: Original strand, 36558473 - 36558569
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt-------ttcatatctatccgatgtgggactaaatcca 651  Q
    |||||||||||||||||| ||||  |||||||||||| |  | ||||||||||||||||        ||||||||||||||||||||||||||||||    
T  36558473 aactcatccttacaaaaccggcttgtaaggtgaggagtgcttactctttataaactcttctcaaaagtcatatctatccgatgtgggactaaatcca 36558569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 562 - 651
Target Start/End: Original strand, 45426943 - 45427039
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaaatcca 651  Q
    |||||||||||||||||| | ||  |||||||||||| | ||||||||||||||||||| |||       ||||||||||||||||| |||||||||    
T  45426943 aactcatccttacaaaaccgacttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtactatctatccgatgtggggctaaatcca 45427039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 562 - 620
Target Start/End: Original strand, 45427259 - 45427317
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||||||||| ||||  |||||||||||| | |||||||||||||||||||    
T  45427259 aactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactctt 45427317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 563 - 644
Target Start/End: Complemental strand, 50307372 - 50307284
Alignment:
Q  563 actcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggact 644  Q
    |||||||||||||||||||| | ||||||||||||| | |||| |||||||||||||| |||       ||||||||||||||||||||    
T  50307372 actcatccttacaaaactggttcataaggtgaggagtgcctccgctttataaactcttgtcaagagtcttatctatccgatgtgggact 50307284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 562 - 620
Target Start/End: Complemental strand, 52214712 - 52214654
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||||||||| ||||  |||||||||||| | |||||||||||||||||||    
T  52214712 aactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactctt 52214654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 562 - 620
Target Start/End: Complemental strand, 56511394 - 56511336
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||||||||| || | ||||||||||||| | |||||||||||||||||||    
T  56511394 aactcatccttacaaaaccggttcataaggtgaggagtgcctcctctttataaactctt 56511336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 562 - 619
Target Start/End: Original strand, 21497690 - 21497747
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactct 619  Q
    |||||||||||||||||| ||||  |||||||||||| | ||||||||||||||||||    
T  21497690 aactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactct 21497747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 562 - 619
Target Start/End: Complemental strand, 21498284 - 21498227
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactct 619  Q
    |||||||||||||||||| ||||  |||||||||||| | ||||||||||||||||||    
T  21498284 aactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactct 21498227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 562 - 650
Target Start/End: Complemental strand, 33912140 - 33912045
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaaatcc 650  Q
    |||||||||||||||||| |||| |||  |||||||| | ||||||||||||||||||| |||       |||||| |||||||||||||||||||    
T  33912140 aactcatccttacaaaaccggcttatacagtgaggagtgcctcctctttataaactcttctcaagtatcctatctacccgatgtgggactaaatcc 33912045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 563 - 620
Target Start/End: Original strand, 52827240 - 52827297
Alignment:
Q  563 actcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    ||||||||||||||||| ||||  |||||||||||| | |||||||||||||||||||    
T  52827240 actcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactctt 52827297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 562 - 648
Target Start/End: Complemental strand, 29734658 - 29734565
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaaat 648  Q
    |||||||||||||||||| ||||  |||||||||||| | ||||||||||  ||||||| |||       ||||||||||||||||||||||||    
T  29734658 aactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttaataactcttctcaaaagtcctatctatccgatgtgggactaaat 29734565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 562 - 644
Target Start/End: Complemental strand, 43943770 - 43943681
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggact 644  Q
    |||||||||||||||||| ||||  |||||||||||  | ||||||||||||||||||| |||       ||||||||||||||||||||    
T  43943770 aactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtgggact 43943681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 562 - 648
Target Start/End: Complemental strand, 43972452 - 43972359
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaaat 648  Q
    |||||||||||||||||| ||||  |||||||||||| | ||||||||||| |||| || |||       ||||||||||||||||||||||||    
T  43972452 aactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttatcaacttttctcaagagtcctatctatccgatgtgggactaaat 43972359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 557 - 620
Target Start/End: Original strand, 53386114 - 53386177
Alignment:
Q  557 ggtcaaactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||| |||||||||||||||||| | ||  |||||||||||  |||||||||||||||||||||    
T  53386114 ggtctaactcatccttacaaaaccgacttgtaaggtgaggaatgtctcctctttataaactctt 53386177  T

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Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 562 - 620
Target Start/End: Complemental strand, 5488464 - 5488406
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||||||||| ||||  |||||||||||  | |||||||||||||||||||    
T  5488464 aactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactctt 5488406  T

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Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 562 - 620
Target Start/End: Complemental strand, 9938546 - 9938488
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||| ||||||||||||||| || |||||||||| || |||||| ||||||||||||||    
T  9938546 aacttatccttacaaaactgacttataaggtgagaagtgtctcccctttataaactctt 9938488  T

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Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 562 - 620
Target Start/End: Original strand, 12016690 - 12016748
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||||||||| ||||  |||||||||||  | |||||||||||||||||||    
T  12016690 aactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactctt 12016748  T

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Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 562 - 620
Target Start/End: Original strand, 12016898 - 12016956
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||||||||| ||||  |||||||||||  | |||||||||||||||||||    
T  12016898 aactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactctt 12016956  T

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Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 562 - 620
Target Start/End: Complemental strand, 23018567 - 23018509
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||||||||| ||||  |||||||||||  | |||||||||||||||||||    
T  23018567 aactcatccttacaaaaccggcttgtaaggtgaggaatgcctcctctttataaactctt 23018509  T

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Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 562 - 620
Target Start/End: Original strand, 25753612 - 25753670
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||||||||| ||||  |||||||||||  | |||||||||||||||||||    
T  25753612 aactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactctt 25753670  T

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Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 562 - 620
Target Start/End: Complemental strand, 28085791 - 28085733
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    ||||| |||||||||||| ||||  |||||||||||| | |||||||||||||||||||    
T  28085791 aactcgtccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactctt 28085733  T

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Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 562 - 651
Target Start/End: Complemental strand, 56509706 - 56509610
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaaatcca 651  Q
    ||||||||| |||||||| ||||  |||| ||||||| | ||||||||||||||||||| |||       |||||||||||||| ||||||||||||    
T  56509706 aactcatccgtacaaaaccggcttgtaagttgaggagtgcctcctctttataaactcttctcaagggtcctatctatccgatgtaggactaaatcca 56509610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 562 - 620
Target Start/End: Complemental strand, 56511601 - 56511543
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||||||||  || | ||||||||||||| | |||||||||||||||||||    
T  56511601 aactcatccttacaaaatcggttcataaggtgaggagtgcctcctctttataaactctt 56511543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 562 - 619
Target Start/End: Complemental strand, 41176803 - 41176746
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactct 619  Q
    |||||||||||||||||| ||||  |||||||||||| |  |||||||||||||||||    
T  41176803 aactcatccttacaaaaccggcttgtaaggtgaggagtgcttcctctttataaactct 41176746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 557 - 650
Target Start/End: Complemental strand, 42901909 - 42901820
Alignment:
Q  557 ggtcaaactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttcatatctatccgatgtgggactaaatcc 650  Q
    |||| ||||||||| |||||||||    ||||  |||||||| | |||||||||||||||||   || |||||||| |||||||||||||||||    
T  42901909 ggtctaactcatccatacaaaact----aatacagtgaggagtgcctcctctttataaactcgaatcctatctatctgatgtgggactaaatcc 42901820  T

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Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 562 - 617
Target Start/End: Original strand, 27048144 - 27048199
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaact 617  Q
    |||||||||||||||||| ||||   ||||||||||| | ||||||||||||||||    
T  27048144 aactcatccttacaaaaccggcttgcaaggtgaggagtgcctcctctttataaact 27048199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 562 - 621
Target Start/End: Complemental strand, 28395274 - 28395215
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttt 621  Q
    |||||||||||||||||| ||||  |||||||||||  | |||||||||||| |||||||    
T  28395274 aactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactcttt 28395215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 562 - 671
Target Start/End: Original strand, 46528930 - 46529047
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaaat-ccata 653  Q
    ||||||||| |||||||| ||||  || ||||||||| | ||||||||||||||||||| |||        |||||||||||||| |||||||| |||      
T  46528930 aactcatccatacaaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaagaatccaatctatccgatgtgagactaaatcccacc 46529029  T
Q  654 tagtgttggctgctaaca 671  Q
     |||||||||||||||||    
T  46529030 gagtgttggctgctaaca 46529047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 562 - 612
Target Start/End: Original strand, 10390302 - 10390352
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttat 612  Q
    ||||||||||||||||||| | | ||||||||||||| |||| ||||||||    
T  10390302 aactcatccttacaaaactagttcataaggtgaggagtgtcttctctttat 10390352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 562 - 620
Target Start/End: Complemental strand, 29113546 - 29113488
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    ||||||||||||||||||  |||  |||||||||||  | |||||||||||||||||||    
T  29113546 aactcatccttacaaaaccagcttgtaaggtgaggattgcctcctctttataaactctt 29113488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 562 - 624
Target Start/End: Original strand, 48843024 - 48843086
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca 624  Q
    |||| |||| || ||||| ||||  |||||||||||| | |||||||||||||||||||||||    
T  48843024 aactaatccctaaaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttttca 48843086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 557 - 618
Target Start/End: Original strand, 6778678 - 6778739
Alignment:
Q  557 ggtcaaactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactc 618  Q
    |||| |||||| ||||||||||| ||||  | |||||||||  |||||||||||||||||||    
T  6778678 ggtctaactcaaccttacaaaaccggcttgtgaggtgaggattgtctcctctttataaactc 6778739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 556 - 617
Target Start/End: Complemental strand, 22865872 - 22865811
Alignment:
Q  556 gggtcaaactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaact 617  Q
    ||||| |||||||||||||||||| || | ||||||||||||  | | ||||||||||||||    
T  22865872 gggtctaactcatccttacaaaaccggttcataaggtgaggactgccccctctttataaact 22865811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 562 - 619
Target Start/End: Complemental strand, 28245885 - 28245828
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactct 619  Q
    |||||||||||||||||| ||||   ||||||||||  | ||||||||||||||||||    
T  28245885 aactcatccttacaaaaccggcttgcaaggtgaggattgcctcctctttataaactct 28245828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 562 - 619
Target Start/End: Complemental strand, 38908214 - 38908157
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactct 619  Q
    |||||||||||||||||| | ||  |||||||||||| |  |||||||||||||||||    
T  38908214 aactcatccttacaaaaccgtcttttaaggtgaggagtgcttcctctttataaactct 38908157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 587 - 651
Target Start/End: Complemental strand, 51564978 - 51564914
Alignment:
Q  587 taaggtgaggagagtctcctcttt-ataaactcttttcatatctatccgatgtgggactaaatcca 651  Q
    |||||||||||| | ||||||||| |||||||||| || |||||| || |||||||||||||||||    
T  51564978 taaggtgaggagtgcctcctcttttataaactcttatc-tatctaaccaatgtgggactaaatcca 51564914  T

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Target: scaffold0785 (Bit Score: 38; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0785
Description:

Target: scaffold0785; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 562 - 650
Target Start/End: Original strand, 3127 - 3222
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggactaaatcc 650  Q
    |||||||||||| |||||  |||  || ||||||||| ||||||||||||||||||||| |||       ||||||||||||||||||||||||||    
T  3127 aactcatccttataaaaccagcttctatggtgaggagtgtctcctctttataaactcttctcaaaaattctatctatccgatgtgggactaaatcc 3222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1138 (Bit Score: 35; Significance: 0.0000000004; HSPs: 1)
Name: scaffold1138
Description:

Target: scaffold1138; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 562 - 620
Target Start/End: Original strand, 2086 - 2144
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||||||||||||||||  |||||||||||  | ||||||| |||||||||||    
T  2086 aactcatccttacaaaactggcttgtaaggtgaggattgcctcctctatataaactctt 2144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 557 - 617
Target Start/End: Original strand, 34507 - 34567
Alignment:
Q  557 ggtcaaactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaact 617  Q
    |||| ||||||| |||||||||| ||||  || ||||||||| ||||||||||||||||||    
T  34507 ggtctaactcattcttacaaaaccggcttgtacggtgaggagtgtctcctctttataaact 34567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 562 - 644
Target Start/End: Complemental strand, 76949 - 76860
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactcttttca-------tatctatccgatgtgggact 644  Q
    |||||||| ||||||||| ||||  |||||||||||  | ||||||||||||||||||| |||       ||||||||||||||||||||    
T  76949 aactcatctttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtgggact 76860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 562 - 620
Target Start/End: Complemental strand, 13403 - 13345
Alignment:
Q  562 aactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    |||||||||| ||||||| ||||  |||||||||||  | |||||||||||||||||||    
T  13403 aactcatcctcacaaaaccggcttgtaaggtgaggattgcctcctctttataaactctt 13345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 554 - 620
Target Start/End: Original strand, 4238 - 4304
Alignment:
Q  554 tggggtcaaactcatccttacaaaactggctaataaggtgaggagagtctcctctttataaactctt 620  Q
    ||||||| |||||||||||||||||| ||||  |||||||||||    |||||||||||| ||||||    
T  4238 tggggtctaactcatccttacaaaaccggcttgtaaggtgaggattacctcctctttatatactctt 4304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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