View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2337_high_16 (Length: 248)
Name: NF2337_high_16
Description: NF2337
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2337_high_16 |
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Alignment Details
Target: chr1 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 3925649 - 3925892
Alignment:
| Q |
1 |
atgactaaatattctaacacacctaggatagcgctgcatacatacaagcataaaacaaaattaaaaaagtgtcaatgattaacatgtattttcagtacgt |
100 |
Q |
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| T |
3925649 |
atgactaaatattctaacacacctaggatagcgctgcatacatacaagcatcaaacaaaattaaaaaagtgtcaatgattaacatgtattttcagtacgt |
3925748 |
T |
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| Q |
101 |
ttatagattaggatgtgtttagatgaatttttagaaaagcaaaaccgcgatgaatgttgataaacacaaataatatagagatgaatttggaaaacaaaca |
200 |
Q |
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| T |
3925749 |
tcatagattaggatgtgtttagatgaatttttagaaaagcaaaaccgcgatgaatgttgataaacacaaataatatagagatgaatttggaaaacataca |
3925848 |
T |
|
| Q |
201 |
tacctcttgaagaaaaccaaaaatagagaggcttagaataattt |
244 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3925849 |
tacctcttgaagaaaaccaaaaatagagaggcttagaataattt |
3925892 |
T |
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