View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2337_low_9 (Length: 372)
Name: NF2337_low_9
Description: NF2337
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2337_low_9 |
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Alignment Details
Target: chr7 (Bit Score: 302; Significance: 1e-170; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 302; E-Value: 1e-170
Query Start/End: Original strand, 14 - 360
Target Start/End: Original strand, 2423381 - 2423726
Alignment:
| Q |
14 |
caacttccactccttaatacctctctcaatctcttttccttctgcaaatccaaaaaacaacgttttacataagaagaagaaaaggataatactaacaagt |
113 |
Q |
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| T |
2423381 |
caacttccactccttaatacctctctcaatctcttttccttctgcaaatccaaaaaacaacgttttacataagaagaagaaaaggataatgctaacaagt |
2423480 |
T |
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| Q |
114 |
gtcttcgtattgctccaaaatcaacagagatagattttgtatggaaaaaataatgtacttattatgttatcaaatgtttaaattatatcaagtatatttt |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2423481 |
gtcttcgtattgctccaaaatcaacagagatagattttgtatggaaaaaataatgtacttattatgttatcaaatgtttaaattatatcaagtatatttt |
2423580 |
T |
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| Q |
214 |
cattttattgattcttttttcgatacttctaagttagtaagacctttaaaaaatacaaaatttgcacgacagtacacaacaagtttaaatatgnnnnnnn |
313 |
Q |
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||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
2423581 |
cattttattgattcttttttcgatacttcgaagttagtaagacctttaaaaaatacaaaatttgcacgacagtacacaacaggtttaaatatg-tttttt |
2423679 |
T |
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| Q |
314 |
nccctaacaaatacaattaggatctttgatctttagtaggcgcccta |
360 |
Q |
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||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
2423680 |
tccctaacaaatacaattaggatctttgatctctagtaggcgcccta |
2423726 |
T |
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