View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2339_low_23 (Length: 264)
Name: NF2339_low_23
Description: NF2339
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2339_low_23 |
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Alignment Details
Target: chr4 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 1715350 - 1715585
Alignment:
| Q |
1 |
acagtttttatgattggagctaaggtgtaaaaattaacaatctagaaatagcaaagagctacatttttatgcacttgttacaataggtacacttgtggat |
100 |
Q |
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| T |
1715350 |
acagtttttatgattggagctaaggtgtaaaaattaacaatctagaaatagcaaagagctacatttttatgcacttgttacaataggtacacttgtggat |
1715449 |
T |
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| Q |
101 |
gtagccatagatatatacgatatatacatgcattcatgtgtttacggaatctcctatggacatttaacatttgatgaacgaaactgaatgacataaagga |
200 |
Q |
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| T |
1715450 |
gtagccatagatatatacgatatatacatgcattcatgtgtttacggaatctcctatggacatttaacatttgatgaacgaaactgaatgacataaagga |
1715549 |
T |
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| Q |
201 |
atgaaacataatatgaagtaatgatattatattgtt |
236 |
Q |
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| T |
1715550 |
atgaaacataatatgaagtaatgatattatattgtt |
1715585 |
T |
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