View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2340_low_2 (Length: 427)

Name: NF2340_low_2
Description: NF2340
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2340_low_2
NF2340_low_2
[»] chr6 (72 HSPs)
chr6 (11-409)||(26802201-26802602)
chr6 (11-406)||(28780902-28781296)
chr6 (11-406)||(28786041-28786435)
chr6 (12-406)||(27724875-27725267)
chr6 (33-406)||(28792184-28792556)
chr6 (11-406)||(27718409-27718803)
chr6 (22-406)||(27698524-27698906)
chr6 (31-406)||(27611032-27611406)
chr6 (11-406)||(27604735-27605135)
chr6 (11-398)||(26655752-26656138)
chr6 (11-398)||(26761723-26762109)
chr6 (11-364)||(27228997-27229347)
chr6 (104-406)||(26646334-26646636)
chr6 (104-406)||(26752302-26752604)
chr6 (85-402)||(27593054-27593371)
chr6 (85-406)||(27678782-27679103)
chr6 (111-406)||(26884025-26884322)
chr6 (85-406)||(27677644-27677965)
chr6 (71-398)||(27338103-27338430)
chr6 (71-398)||(27398843-27399170)
chr6 (131-398)||(27531235-27531502)
chr6 (85-406)||(27706432-27706753)
chr6 (85-406)||(31284124-31284445)
chr6 (79-406)||(26622806-26623133)
chr6 (79-406)||(26728784-26729111)
chr6 (143-395)||(25579613-25579865)
chr6 (11-378)||(26823609-26823969)
chr6 (143-395)||(25481636-25481888)
chr6 (143-395)||(26142759-26143011)
chr6 (87-367)||(26861454-26861734)
chr6 (143-395)||(25538434-25538686)
chr6 (143-395)||(26055820-26056072)
chr6 (143-395)||(26075790-26076042)
chr6 (143-395)||(26048739-26048991)
chr6 (143-395)||(26069908-26070160)
chr6 (126-373)||(28234441-28234688)
chr6 (114-384)||(28226815-28227085)
chr6 (16-247)||(27427792-27428020)
chr6 (111-384)||(28325343-28325616)
chr6 (253-370)||(25506975-25507092)
chr6 (105-373)||(28185222-28185490)
chr6 (105-384)||(28180970-28181249)
chr6 (147-384)||(28242702-28242939)
chr6 (81-373)||(28139373-28139665)
chr6 (223-398)||(28149912-28150086)
chr6 (144-384)||(26848555-26848795)
chr6 (103-379)||(28098426-28098702)
chr6 (113-384)||(26341986-26342257)
chr6 (126-364)||(26893543-26893781)
chr6 (111-384)||(28297765-28298038)
chr6 (111-384)||(28514035-28514308)
chr6 (109-373)||(26936954-26937218)
chr6 (180-304)||(29825958-29826082)
chr6 (144-298)||(26635585-26635739)
chr6 (144-298)||(26741551-26741705)
chr6 (144-308)||(25071554-25071718)
chr6 (168-308)||(26949580-26949720)
chr6 (144-272)||(27214312-27214440)
chr6 (144-272)||(27234788-27234916)
chr6 (189-274)||(26617266-26617351)
chr6 (189-274)||(26723194-26723279)
chr6 (153-274)||(26959069-26959190)
chr6 (144-281)||(27665272-27665409)
chr6 (193-296)||(26811453-26811556)
chr6 (249-403)||(2184288-2184442)
chr6 (11-43)||(27338450-27338482)
chr6 (11-43)||(27399190-27399222)
chr6 (212-296)||(28491660-28491744)
chr6 (212-296)||(29804070-29804154)
chr6 (231-402)||(2184880-2185051)
chr6 (219-298)||(29467797-29467876)
chr6 (168-298)||(26974971-26975101)
[»] scaffold0277 (2 HSPs)
scaffold0277 (11-406)||(13662-14056)
scaffold0277 (11-406)||(4701-5100)
[»] scaffold0349 (3 HSPs)
scaffold0349 (12-406)||(3451-3844)
scaffold0349 (22-406)||(14386-14767)
scaffold0349 (11-176)||(8061-8225)
[»] scaffold0419 (1 HSPs)
scaffold0419 (11-406)||(7295-7682)
[»] scaffold1254 (1 HSPs)
scaffold1254 (11-352)||(1-334)
[»] chr4 (8 HSPs)
chr4 (13-406)||(18699417-18699807)
chr4 (11-400)||(18679590-18679976)
chr4 (11-400)||(18731527-18731913)
chr4 (11-406)||(18655494-18655886)
chr4 (79-400)||(18724108-18724429)
chr4 (16-247)||(17989226-17989454)
chr4 (16-247)||(18073535-18073763)
chr4 (153-303)||(5091087-5091237)
[»] chr1 (3 HSPs)
chr1 (65-403)||(28164382-28164720)
chr1 (85-400)||(268380-268695)
chr1 (111-403)||(28127699-28127992)
[»] chr8 (2 HSPs)
chr8 (85-400)||(29273806-29274121)
chr8 (125-280)||(31903727-31903882)
[»] scaffold0038 (4 HSPs)
scaffold0038 (126-384)||(34602-34860)
scaffold0038 (114-384)||(27313-27583)
scaffold0038 (111-384)||(116658-116931)
scaffold0038 (147-384)||(42864-43101)
[»] scaffold0019 (1 HSPs)
scaffold0019 (111-384)||(58334-58607)
[»] scaffold0003 (1 HSPs)
scaffold0003 (16-247)||(59343-59571)
[»] chr2 (2 HSPs)
chr2 (123-384)||(3279562-3279823)
chr2 (87-308)||(17993812-17994033)
[»] chr5 (1 HSPs)
chr5 (182-298)||(16688944-16689060)


Alignment Details
Target: chr6 (Bit Score: 367; Significance: 0; HSPs: 72)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 367; E-Value: 0
Query Start/End: Original strand, 11 - 409
Target Start/End: Original strand, 26802201 - 26802602
Alignment:
Q  11 cacagaccacaaaaacttactcattcatattctgcattctcaaactcnnnnnnn---catccaatttctcacaattttcatggctatgcagtctccttcc 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||    
T  26802201 cacagaccacaaaaacttactcattcatattctgcattctcaaactcttttttttttcatccaatttctcacaattttcatggctatgcagtctccttcc 26802300  T
Q  108 tcatcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctc 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26802301 tcatcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctc 26802400  T
Q  208 ttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaat 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26802401 ttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaat 26802500  T
Q  308 ttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgtc 407  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26802501 ttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgtc 26802600  T
Q  408 tt 409  Q
    ||    
T  26802601 tt 26802602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 11 - 406
Target Start/End: Original strand, 28780902 - 28781296
Alignment:
Q  11 cacagaccacaaaaacttactcattcatattctgcattctcaaactcnnnnnnncatccaatttctcacaattttcatggctatgcagtctccttcctca 110  Q
    ||||||||||||||||  |||||||||||||||| ||||||||||||       ||||||||||||| ||||| ||||||||||||| |  ||||||||     
T  28780902 cacagaccacaaaaacaaactcattcatattctgaattctcaaactctttttt-catccaatttctctcaattatcatggctatgcaattaccttcctct 28781000  T
Q  111 tcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctctta 210  Q
    |||||||||||||| | || |||||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||    
T  28781001 tcctcttcattttcctctgcattcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccggcaatctctacaaggctctta 28781100  T
Q  211 ttgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttt 310  Q
     ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||    
T  28781101 ctgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttt 28781200  T
Q  311 tattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgt 406  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  28781201 tattcctgtgttttctatcaactatgccacttcaaaattttgcttggacgaacttgttcacattattcattgctacaagacaaaaggtcgcctcgt 28781296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 11 - 406
Target Start/End: Original strand, 28786041 - 28786435
Alignment:
Q  11 cacagaccacaaaaacttactcattcatattctgcattctcaaactcnnnnnnncatccaatttctcacaattttcatggctatgcagtctccttcctca 110  Q
    ||||||||||||||||  |||||||||||||||| ||||||||||||       ||||||||||||| ||||| | |||||||| || || |||||||||    
T  28786041 cacagaccacaaaaacaaactcattcatattctgaattctcaaactctttttt-catccaatttctctcaattcttatggctatacaatcaccttcctca 28786139  T
Q  111 tcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctctta 210  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| || |||||||||||||||||||    
T  28786140 tcctcttcattttcctatggattcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccggaaatctctacaaggctctta 28786239  T
Q  211 ttgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttt 310  Q
     ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||    
T  28786240 ctgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttt 28786339  T
Q  311 tattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgt 406  Q
    |||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  28786340 tattcctgtgttttctatcaactacgccacatcaaaattttgcttggacgaacttgttcacattattcattgctacaagacaaaaggtcgcctcgt 28786435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 12 - 406
Target Start/End: Complemental strand, 27725267 - 27724875
Alignment:
Q  12 acagaccacaaaaacttactcattcatattctgcattctcaaactcnnnnnnncatccaatttctcacaattttcatggctatgcagtctccttcctcat 111  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||       ||||| ||||||| ||||| |||||||||| || || ||||||||||    
T  27725267 acagaccacaaaaatttac-cattcatattctgcattctcaaactctttttt-catcctatttctctcaattgtcatggctatacaatcaccttcctcat 27725170  T
Q  112 cctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttat 211  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| || |||||||||||||||||||     
T  27725169 cctcttcattttcctatggattcacttaccaagtgttccttagttttaggggcactgacactcggcacggttttaccggaaatctctacaaggctcttac 27725070  T
Q  212 tgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaattttt 311  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||    
T  27725069 tgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggattttt 27724970  T
Q  312 attcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgt 406  Q
    |||||||||||||||||||||||||||| |||    ||||| |||||||||||||| ||||| ||||| ||||| ||||||||||||||||||||    
T  27724969 attcctgtgttttctatcaactatgcctattcttcgttttgtttggacgaacttgtccacataattcactgctacaagacaaagggtcgcctcgt 27724875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 33 - 406
Target Start/End: Original strand, 28792184 - 28792556
Alignment:
Q  33 attcatattctgcattctcaaactcnnnnnnncatccaatttctcacaattttcatggctatgcagtctccttcctcatcctcttcattttcttatggat 132  Q
    |||||||||||| ||||||||||||       ||||||||||||| ||||| | |||||||| || || ||||||||||||||||||||||| |||||||    
T  28792184 attcatattctgaattctcaaactctttttt-catccaatttctctcaattcttatggctatacaatcaccttcctcatcctcttcattttcctatggat 28792282  T
Q  133 tcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattgacaagggaatccatacctt 232  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||||||||| || ||||||||||||||||||| ||||||||||||| | |||||    
T  28792283 tcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaacctt 28792382  T
Q  233 cattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattcctgtgttttctatcaac 332  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  28792383 cattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttttattcctgtgttttctatcaac 28792482  T
Q  333 tatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgt 406  Q
    || ||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  28792483 tacgccacatcaaaattttgcttggacgaacttgttcacattattcattgctacaagacaaaaggtcgcctcgt 28792556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 11 - 406
Target Start/End: Complemental strand, 27718803 - 27718409
Alignment:
Q  11 cacagaccacaaaaacttactcattcatattctgcattctcaaactcnnnnnnncatccaatttctcacaattttcatggctatgcagtctccttcctca 110  Q
    |||||| |||||||| | |||||||||||||||||||||||||||||       ||||| ||||||| ||||| |||||||||| || || |||||||||    
T  27718803 cacagaacacaaaaattcactcattcatattctgcattctcaaactctttttt-catcctatttctctcaattctcatggctatacaatcaccttcctca 27718705  T
Q  111 tcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctctta 210  Q
    ||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| || |||||||||||||||||||    
T  27718704 tcctcttcattctcccatggattcacttaccaagtgttcctcagttttaggggcactgacactcggcacagttttaccggaaatctctacaaggctctta 27718605  T
Q  211 ttgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttt 310  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||    
T  27718604 ctgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatttt 27718505  T
Q  311 tattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgt 406  Q
    |||||||||||||||||||||||||||||||||    ||||| |||||||||||||| ||||| ||||| ||||| ||||||||||||||||||||    
T  27718504 tattcctgtgttttctatcaactatgcctcttcttcgttttgtttggacgaacttgtccacataattcactgctacaagacaaagggtcgcctcgt 27718409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 22 - 406
Target Start/End: Complemental strand, 27698906 - 27698524
Alignment:
Q  22 aaaacttactcattcatattctgcattctcaaactcnnnnnnncatccaatttctcacaattttcatggctatgcagtctccttcctcatcctcttcatt 121  Q
    |||| |||||||||||||||||||||||||||||||       ||||| ||||||| ||||| |||||||||| || || |||||||||||| |||||||    
T  27698906 aaaatttactcattcatattctgcattctcaaactcttttt--catcctatttctctcaattctcatggctatacaatcaccttcctcatccacttcatt 27698809  T
Q  122 ttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattgacaaggga 221  Q
    ||| |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||| ||||||||||    
T  27698808 ttcctatggattcacttaccaagtgttcatcagttttaggggcactgacactcggcacggttttaccggaaatctctacaaggctcttactgacaaggga 27698709  T
Q  222 atccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattcctgtgt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||    
T  27698708 atccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatttttattcctgtgt 27698609  T
Q  322 tttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgt 406  Q
    ||||| |||||||||| |||||   |||||| |||||||||||||| ||||| ||||| |||||  |||||||||||||||||||    
T  27698608 tttctctcaactatgcatcttcttcattttgtttggacgaacttgtccacataattcactgctacgagacaaagggtcgcctcgt 27698524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 31 - 406
Target Start/End: Complemental strand, 27611406 - 27611032
Alignment:
Q  31 tcattcatattctgcattctcaaactcnnnnnnncatccaatttctcacaattttcatggctatgcagtctccttcctcatcctcttcattttcttatgg 130  Q
    |||||||||||||||||||||||||||       ||||||||||||| ||||||||||||||||||| |   ||||||| || ||||||||||| |||||    
T  27611406 tcattcatattctgcattctcaaactctttttt-catccaatttctctcaattttcatggctatgcaattagcttcctcttcttcttcattttcctatgg 27611308  T
Q  131 attcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattgacaagggaatccatacc 230  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||||| || ||||||||||||||||||| |||||||||||||||||||    
T  27611307 attcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccggaaatctctacaaggctcttactgacaagggaatccatacc 27611208  T
Q  231 ttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattcctgtgttttctatca 330  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||    
T  27611207 ttcattgatgacaatgatcttccaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatttttattcctgtgttttctatca 27611108  T
Q  331 actatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgt 406  Q
    |||||||||||||    ||||| |||||||||||||| ||||| ||||| ||||| ||||||||||||||||||||    
T  27611107 actatgcctcttcttcgttttgtttggacgaacttgtccacataattcactgctacaagacaaagggtcgcctcgt 27611032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 11 - 406
Target Start/End: Complemental strand, 27605135 - 27604735
Alignment:
Q  11 cacagaccacaaaaacttactcattcatattctgcattctcaaactcnnnnnnncatccaatttctcacaattttcatggctatgcagtctccttcctca 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||| ||||| ||||||||||||| |  |||||||||    
T  27605135 cacagaccacaaaaacttactcattcatattctgcattctcaaactctttttt-catccaatttctctcaattctcatggctatgcaattaccttcctca 27605037  T
Q  111 tcctc------ttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaagg 204  Q
    |||||      ||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  27605036 tcctcatcctcttcattttcctatgcattcacttaccaagtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaagg 27604937  T
Q  205 ctcttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctag 304  Q
    |||||| |||||||||||| ||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||  ||||||||||||| ||||| ||    
T  27604936 ctcttactgacaagggaattcataccttcattgatgaaaatgatcttcgaagaggagatgaaatcacaccagcacttctcaaggccattgatgaatccag 27604837  T
Q  305 aatttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctc 404  Q
     |||||||||||||||||||||||||| |||||||||||    ||||| ||||| |||||||||||||| ||||||||||| | ||||||||||||| ||    
T  27604836 gatttttattcctgtgttttctatcaaatatgcctcttcttccttttgtttggatgaacttgttcacatcattcattgctacacgacaaagggtcgcgtc 27604737  T
Q  405 gt 406  Q
    ||    
T  27604736 gt 27604735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 11 - 398
Target Start/End: Original strand, 26655752 - 26656138
Alignment:
Q  11 cacagaccacaaaaacttactcattcatattctgcattctcaaactcnnnnnnncatccaatttctcacaattttcatggctatgcagtctccttcctca 110  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||       |||||| |||||| ||||| |||||||||| || || |||||||||    
T  26655752 cacagaccacaaaaacttactcattcatattctgcattcccaaactctttttt-catccattttctctcaattctcatggctatacaatcaccttcctca 26655850  T
Q  111 tcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctctta 210  Q
    |||||||||||||| ||||| || |  |||||||||||||||||||||||||||| |||||| ||| |||||||||| ||||||||||||||||||||||    
T  26655851 tcctcttcattttcctatgggtttaaataccaagtgttcctcagttttaggggcattgacacccggcacggttttaccggcaatctctacaaggctctta 26655950  T
Q  211 ttgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttt 310  Q
    |||| |||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||| | ||||||||||||||||| || |||||    
T  26655951 ttgataagggaatccatactttcattgatgacaatgatcttctcagaggagatgaaatcacaccatcactcgttaaggccattgaagaatccaggatttt 26656050  T
Q  311 tattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggt 398  Q
    ||||||  | ||||||  ||||||||| |||||   |||||| |||||||||||||| ||||| ||||||||||||||||||||||||    
T  26656051 tattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcattgctataagacaaagggt 26656138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 11 - 398
Target Start/End: Original strand, 26761723 - 26762109
Alignment:
Q  11 cacagaccacaaaaacttactcattcatattctgcattctcaaactcnnnnnnncatccaatttctcacaattttcatggctatgcagtctccttcctca 110  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||       |||||| |||||| ||||| |||||||||| || || |||||||||    
T  26761723 cacagaccacaaaaacttactcattcatattctgcattcccaaactctttttt-catccattttctctcaattctcatggctatacaatcaccttcctca 26761821  T
Q  111 tcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctctta 210  Q
    |||||||||||||| ||||| || |  |||||||||||||||||||||||||||| |||||| ||| |||||||||| ||||||||||||||||||||||    
T  26761822 tcctcttcattttcctatgggtttaaataccaagtgttcctcagttttaggggcattgacacccggcacggttttaccggcaatctctacaaggctctta 26761921  T
Q  211 ttgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttt 310  Q
    |||| |||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||| | ||||||||||||||||| || |||||    
T  26761922 ttgataagggaatccatactttcattgatgacaatgatcttctcagaggagatgaaatcacaccatcactcgttaaggccattgaagaatccaggatttt 26762021  T
Q  311 tattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggt 398  Q
    ||||||  | ||||||  ||||||||| |||||   |||||| |||||||||||||| ||||| ||||||||||||||||||||||||    
T  26762022 tattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcattgctataagacaaagggt 26762109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 11 - 364
Target Start/End: Original strand, 27228997 - 27229347
Alignment:
Q  11 cacagaccacaaaaacttactcattcatattctgcattctcaaactcnnnnnnncatccaatttctcacaattttcatggctatgcagtctccttcctca 110  Q
    |||| ||||||||||| ||||||||||||||||||||||| ||||||       ||||||||||||| ||| | |||||||||| || || ||||||||     
T  27228997 cacataccacaaaaacatactcattcatattctgcattctaaaactctttt---catccaatttctctcaagtctcatggctatacaatcaccttcctct 27229093  T
Q  111 tcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctctta 210  Q
    |||||||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  27229094 tcctcttcattttcctttggattcacttaccaagtgttccttagttttaggggcactgacactcggcacggttttaccggcaatctctacaaggctctta 27229193  T
Q  211 ttgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttt 310  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||| | |||||    
T  27229194 ctgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagacgaaatcacaccatcactcgtcaaggccattgacgaatctcggatttt 27229293  T
Q  311 tattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaact 364  Q
    ||||||  | ||||||  ||||||||| |||||   |||||| ||| |||||||    
T  27229294 tattcccatattttctgccaactatgcatcttcttcattttgtttgaacgaact 27229347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 104 - 406
Target Start/End: Original strand, 26646334 - 26646636
Alignment:
Q  104 ttcctcatcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaag 203  Q
    |||||| ||||||| | |||| || |||||||| ||||| || |||||||  || ||||||| |||||||||  |||||||||| ||  |||||||||||    
T  26646334 ttcctcttcctctttaatttcctacggattcacctaccaggtcttcctcaacttcaggggcagtgacactcgtgacggttttactggacatctctacaag 26646433  T
Q  204 gctcttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatcta 303  Q
    ||||||| |||||||||||| || ||||||||||||||   ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  26646434 gctcttactgacaagggaattcacaccttcattgatgattgtgatcttaagagaggagatgaaatcacaccatcactcatcaaggccattgaagaatcta 26646533  T
Q  304 gaatttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcct 403  Q
    | |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||| ||||||||||| |||||||||||||| ||    
T  26646534 ggatttttattcctgtgttttctatcaactatgcctcttctaaattttgtttggacgaacttgtccacatcattcattgctacaagacaaagggtcgtct 26646633  T
Q  404 cgt 406  Q
    |||    
T  26646634 cgt 26646636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 104 - 406
Target Start/End: Original strand, 26752302 - 26752604
Alignment:
Q  104 ttcctcatcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaag 203  Q
    |||||| ||||||| | |||| || |||||||| ||||| || |||||||  || ||||||| |||||||||  |||||||||| ||  |||||||||||    
T  26752302 ttcctcttcctctttaatttcctacggattcacctaccaggtcttcctcaacttcaggggcagtgacactcgtgacggttttactggacatctctacaag 26752401  T
Q  204 gctcttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatcta 303  Q
    ||||||| |||||||||||| || ||||||||||||||   ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  26752402 gctcttactgacaagggaattcacaccttcattgatgattgtgatcttaagagaggagatgaaatcacaccatcactcatcaaggccattgaagaatcta 26752501  T
Q  304 gaatttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcct 403  Q
    | |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||| ||||||||||| |||||||||||||| ||    
T  26752502 ggatttttattcctgtgttttctatcaactatgcctcttctaaattttgtttggacgaacttgtccacatcattcattgctacaagacaaagggtcgtct 26752601  T
Q  404 cgt 406  Q
    |||    
T  26752602 cgt 26752604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 85 - 402
Target Start/End: Complemental strand, 27593371 - 27593054
Alignment:
Q  85 tcatggctatgcagtctccttcctcatcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttt 184  Q
    ||||||||||||| || |||||||| ||| ||||| |||| ||||  | ||  |||||||| ||||||||||| || || | ||||||||||||||||||    
T  27593371 tcatggctatgcaatcaccttcctcttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacggttt 27593272  T
Q  185 tacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatc 284  Q
     || |||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||| ||||||||||||| |||||||||||||||||||  ||    
T  27593271 caccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcacttctc 27593172  T
Q  285 aaggccattgaagaatctagaatttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgct 384  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||    ||||| |||||||||||||  ||||| ||||||||||    
T  27593171 aaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcgttttgtttggacgaacttgaccacatcattcattgct 27593072  T
Q  385 ataagacaaagggtcgcc 402  Q
    | ||||||||||||||||    
T  27593071 acaagacaaagggtcgcc 27593054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 85 - 406
Target Start/End: Original strand, 27678782 - 27679103
Alignment:
Q  85 tcatggctatgcagtctccttcctcatcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttt 184  Q
    ||||||||||||| || |||||||| ||| ||||| |||| ||||  | ||  |||||||| ||||||||||| || || | ||||||||||||||||||    
T  27678782 tcatggctatgcaatcaccttcctcttccacttcaatttcctatgagtacaaataccaagtattcctcagtttcagaggaagtgacactcggtacggttt 27678881  T
Q  185 tacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatc 284  Q
     || || ||||||||||||||||||| ||||||||||||| | |||||||||||| | |||| |||||||||||||||||||||||||||||||||  ||    
T  27678882 caccgggaatctctacaaggctcttactgacaagggaatcaacaccttcattgataagaatggtcttcaaagaggagatgaaatcacaccatcacttctc 27678981  T
Q  285 aaggccattgaagaatctagaatttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgct 384  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||   |||||| |||||||||||||| ||||| ||||| ||||    
T  27678982 aaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgct 27679081  T
Q  385 ataagacaaagggtcgcctcgt 406  Q
    | ||||||||||||||||||||    
T  27679082 acaagacaaagggtcgcctcgt 27679103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 111 - 406
Target Start/End: Original strand, 26884025 - 26884322
Alignment:
Q  111 tcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctctta 210  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| || || | |||||||||||| ||||| || || |||||||||||||||||||    
T  26884025 tcctcttcattttcctatggattcacttaccaagtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctctta 26884124  T
Q  211 ttgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttt 310  Q
     | ||||||||||||| |||||||||||||| ||| |||||| |||||||   |||||||||||||||||||||||||||||||||||||||||||||||    
T  26884125 ctaacaagggaatccacaccttcattgatgataatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatttt 26884224  T
Q  311 tattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcaca--ttattcattgctataagacaaagggtcgcctcgt 406  Q
    ||||||  | ||||||| ||||||||| |||||   |||||| |||||||||||||| ||||  | ||||| |||||  |||||||||||||||||||    
T  26884225 tattccaatattttctaccaactatgcatcttcttcattttgtttggacgaacttgtccacatgtcattcactgctacgagacaaagggtcgcctcgt 26884322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 85 - 406
Target Start/End: Complemental strand, 27677965 - 27677644
Alignment:
Q  85 tcatggctatgcagtctccttcctcatcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttt 184  Q
    ||||||||||||| || |||||||| ||| ||||| |||| ||||  | ||  |||||||| ||||||| ||| || || | ||||||||||||||||||    
T  27677965 tcatggctatgcaatcaccttcctcttccacttcaatttcctatgagtacaaataccaagtattcctcaatttcagaggaagtgacactcggtacggttt 27677866  T
Q  185 tacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatc 284  Q
     || |||||||||||||||||||||  ||||||||||||||| |||||||||||  |  |||| ||||||||||| ||||||||||||||||||||  ||    
T  27677865 caccggcaatctctacaaggctcttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcacttctc 27677766  T
Q  285 aaggccattgaagaatctagaatttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgct 384  Q
    |||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||   |||||| |||||||||||||| ||||| ||||| ||||    
T  27677765 aaggccattgaagagtctaggatttttattgctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgct 27677666  T
Q  385 ataagacaaagggtcgcctcgt 406  Q
    | ||||||||||||||||||||    
T  27677665 acaagacaaagggtcgcctcgt 27677644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 71 - 398
Target Start/End: Complemental strand, 27338430 - 27338103
Alignment:
Q  71 atttctcacaattttcatggctatgcagtctccttcctcatcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgac 170  Q
    ||||||| ||||| ||||||||||||| || | |||||| ||||||||| |||| | ||| ||||  ||||| ||||||||||||||||||| || ||||    
T  27338430 atttctctcaattctcatggctatgcaatcactttcctcttcctcttcaatttcctctgggttcaaataccatgtgttcctcagttttagggacattgac 27338331  T
Q  171 actcggtacggttttacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatca 270  Q
    ||||  ||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |||||| ||||||||||||||| ||    
T  27338330 actctttacggttttaccggcaatctctacaaggctcttattgacaagggaatcaaaaccttcattgatgacaacgatcttgaaagaggagatgaaagca 27338231  T
Q  271 caccatcactcatcaaggccattgaagaatctagaatttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttca 370  Q
    ||||||||||  |||||||||||||||| ||||| ||||| |||||  | ||||||   |||||||| |||||   ||||||||||||||||||||| ||    
T  27338230 caccatcacttgtcaaggccattgaagagtctaggattttgattcccatattttctgcaaactatgcatcttcttcattttgcttggacgaacttgtcca 27338131  T
Q  371 cattattcattgctataagacaaagggt 398  Q
    ||| ||||| ||||| ||||||| ||||    
T  27338130 catcattcactgctacaagacaaggggt 27338103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 71 - 398
Target Start/End: Complemental strand, 27399170 - 27398843
Alignment:
Q  71 atttctcacaattttcatggctatgcagtctccttcctcatcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgac 170  Q
    ||||||| ||||| ||||||||||||| || | |||||| ||||||||| |||| | ||| ||||  ||||| ||||||||||||||||||| || ||||    
T  27399170 atttctctcaattctcatggctatgcaatcactttcctcttcctcttcaatttcctctgggttcaaataccatgtgttcctcagttttagggacattgac 27399071  T
Q  171 actcggtacggttttacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatca 270  Q
    ||||  ||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |||||| ||||||||||||||| ||    
T  27399070 actctttacggttttaccggcaatctctacaaggctcttattgacaagggaatcaaaaccttcattgatgacaacgatcttgaaagaggagatgaaagca 27398971  T
Q  271 caccatcactcatcaaggccattgaagaatctagaatttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttca 370  Q
    ||||||||||  |||||||||||||||| ||||| ||||| |||||  | ||||||   |||||||| |||||   ||||||||||||||||||||| ||    
T  27398970 caccatcacttgtcaaggccattgaagagtctaggattttgattcccatattttctgcaaactatgcatcttcttcattttgcttggacgaacttgtcca 27398871  T
Q  371 cattattcattgctataagacaaagggt 398  Q
    ||| ||||| ||||| ||||||| ||||    
T  27398870 catcattcactgctacaagacaaggggt 27398843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 131 - 398
Target Start/End: Complemental strand, 27531502 - 27531235
Alignment:
Q  131 attcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattgacaagggaatccatacc 230  Q
    |||||||||||||||||||||||||||||||||| | ||||||||  |||||||||| || ||||||||||||||||||| ||||||||||||| |||||    
T  27531502 attcacttaccaagtgttcctcagttttaggggcgcggacactcgccacggttttaccggaaatctctacaaggctcttactgacaagggaatctatacc 27531403  T
Q  231 ttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattcctgtgttttctatca 330  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |  || ||||||||| ||||||| ||||||||||| || ||||||   |    
T  27531402 ttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactaaaaaatgccattgaaaaatctaggatttttattcccgtattttctgaaa 27531303  T
Q  331 actatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggt 398  Q
    ||||||| |||||   |||||| |||||||||||||||||||| | |||||||||  | |||||||||    
T  27531302 actatgcatcttcttcattttgtttggacgaacttgttcacatcactcattgctacgatacaaagggt 27531235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 85 - 406
Target Start/End: Complemental strand, 27706753 - 27706432
Alignment:
Q  85 tcatggctatgcagtctccttcctcatcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttt 184  Q
    ||||||||||||| || |||| ||| ||| ||||| |||| ||||  | ||  |||||||| ||||||||||| || ||   ||||||||||||||||||    
T  27706753 tcatggctatgcaatcacctttctcttccacttcaatttcctatgagtacaaataccaagtattcctcagtttcagaggaggtgacactcggtacggttt 27706654  T
Q  185 tacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatc 284  Q
     || |||||||||||||||||| ||  ||||||||||||||| |||||||||||  |  |||| ||||||||| | ||||||||||||||||||||  ||    
T  27706653 cacaggcaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaagggatgaaatcacaccatcacttctc 27706554  T
Q  285 aaggccattgaagaatctagaatttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgct 384  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||   |||||| |||||||||||||| ||||| ||||| ||||    
T  27706553 aaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgct 27706454  T
Q  385 ataagacaaagggtcgcctcgt 406  Q
    | ||||||||||||||||||||    
T  27706453 acaagacaaagggtcgcctcgt 27706432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 85 - 406
Target Start/End: Original strand, 31284124 - 31284445
Alignment:
Q  85 tcatggctatgcagtctccttcctcatcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttt 184  Q
    ||||||||||||| ||  ||||||| ||||||||| |||| |||| |||||  |||||||| ||||| ||||| ||||| | |||||||||||| |||||    
T  31284124 tcatggctatgcaatcatcttcctcttcctcttcaatttcctatgtattcaaataccaagtattccttagtttcaggggaagtgacactcggtatggttt 31284223  T
Q  185 tacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatc 284  Q
     || |||||||||||||||||||||| ||||||||||||||| |||||||||||||| | ||| ||||||||||| |||||||||||||||||||||  |    
T  31284224 caccggcaatctctacaaggctcttactgacaagggaatccacaccttcattgatgatagtgaacttcaaagaggggatgaaatcacaccatcactcgac 31284323  T
Q  285 aaggccattgaagaatctagaatttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgct 384  Q
    || ||||||||||| ||||| |||||||| || |||||||||  |||||||||||||||    ||||| |||||||||||||| ||||| ||||| |  |    
T  31284324 aatgccattgaagagtctaggatttttatccccgtgttttctgccaactatgcctcttcgtcgttttgtttggacgaacttgtccacatcattcacttgt 31284423  T
Q  385 ataagacaaagggtcgcctcgt 406  Q
    |||||  ||| |||||||||||    
T  31284424 ataagcaaaatggtcgcctcgt 31284445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 79 - 406
Target Start/End: Original strand, 26622806 - 26623133
Alignment:
Q  79 caattttcatggctatgcagtctccttcctcatcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggta 178  Q
    ||||| ||||||||||||| || || ||||| ||||||||| |||| |||  |||||  |||||||||||||| ||||| || |||| ||||||||||||    
T  26622806 caattatcatggctatgcaatcaccatcctcttcctcttcaatttcctatcaattcaaataccaagtgttcctaagtttcagaggcagtgacactcggta 26622905  T
Q  179 cggttttacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatca 278  Q
    |||||| || || ||||||||||||||||||| ||||||||||||||| ||||||||||||||   ||| ||||||||||| || ||||||| |||||||    
T  26622906 cggtttcactggaaatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagaggggacgaaatcaaaccatca 26623005  T
Q  279 ctcatcaaggccattgaagaatctagaatttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattc 378  Q
    ||   ||| || || ||||| ||||| |||||||||||||||||||||  ||||||||| | |||   |||||| ||||| |||||||| ||||| ||||    
T  26623006 cttgacaatgctatcgaagagtctaggatttttattcctgtgttttctcccaactatgcatattcttcattttgtttggatgaacttgtccacatcattc 26623105  T
Q  379 attgctataagacaaagggtcgcctcgt 406  Q
    | ||||| || ||||||||||| |||||    
T  26623106 actgctacaaaacaaagggtcgtctcgt 26623133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 79 - 406
Target Start/End: Original strand, 26728784 - 26729111
Alignment:
Q  79 caattttcatggctatgcagtctccttcctcatcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggta 178  Q
    ||||| ||||||||||||| || || ||||| ||||||||| |||| |||  |||||  |||||||||||||| ||||| || |||| ||||||||||||    
T  26728784 caattatcatggctatgcaatcaccatcctcttcctcttcaatttcctatcaattcaaataccaagtgttcctaagtttcagaggcagtgacactcggta 26728883  T
Q  179 cggttttacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatca 278  Q
    |||||| || || ||||||||||||||||||| ||||||||||||||| ||||||||||||||   ||| ||||||||||| || ||||||| |||||||    
T  26728884 cggtttcactggaaatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagaggggacgaaatcaaaccatca 26728983  T
Q  279 ctcatcaaggccattgaagaatctagaatttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattc 378  Q
    ||   ||| || || ||||| ||||| |||||||||||||||||||||  ||||||||| | |||   |||||| ||||| |||||||| ||||| ||||    
T  26728984 cttgacaatgctatcgaagagtctaggatttttattcctgtgttttctcccaactatgcatattcttcattttgtttggatgaacttgtccacatcattc 26729083  T
Q  379 attgctataagacaaagggtcgcctcgt 406  Q
    | ||||| || ||||||||||| |||||    
T  26729084 actgctacaaaacaaagggtcgtctcgt 26729111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 143 - 395
Target Start/End: Original strand, 25579613 - 25579865
Alignment:
Q  143 agtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgac 242  Q
    ||||||||||||||| || |||| |||||||||  ||  |||||| || |||||||| ||||||||| ||||||||||||| | ||||||| |||||||     
T  25579613 agtgttcctcagtttcagaggcagtgacactcgcaacacttttaccggtaatctctataaggctcttgttgacaagggaattcgtaccttctttgatgat 25579712  T
Q  243 aatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattcctgtgttttctatcaactatgcctctt 342  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||  | ||||||  ||||||||| ||||    
T  25579713 aatgatcttcaaagaggagatgaaatcacaccatcacttgtcaaggccattgaagaatctaggatttttattcccatattttctgccaactatgcatctt 25579812  T
Q  343 caaaattttgcttggacgaacttgttcacattattcattgctataagacaaag 395  Q
    |   |||||| |||||||||||||| ||||| ||||| ||||| |||||||||    
T  25579813 cttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaag 25579865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 11 - 378
Target Start/End: Original strand, 26823609 - 26823969
Alignment:
Q  11 cacagaccacaaaaacttactcattcatattctgcattctcaaactcnnnnnnncatccaatttctcacaattttcatggctatgcagtctccttcctca 110  Q
    |||| ||||||  ||| ||||||||||||||||||||||||||||||       | ||||||||||| ||||| ||||||||||||||||  |||||||     
T  26823609 cacacaccacagtaacatactcattcatattctgcattctcaaactctttctt-cgtccaatttctctcaattctcatggctatgcagtcaacttcctc- 26823706  T
Q  111 tcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctctta 210  Q
         |||| |||| ||||  ||||  ||||||||||| ||||||||||| ||| ||||||||||||| |  ||||| ||||||||||||||||||||||    
T  26823707 -----ttcagtttcatatgatttcaaataccaagtgtttctcagttttagaggcgctgacactcggtatgaatttaccggcaatctctacaaggctctta 26823801  T
Q  211 ttgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttt 310  Q
      |||||||||||||| |||||  |||||||   ||| ||||||||||| ||| |||||  || ||||||||  || ||||||||||| ||||| |||||    
T  26823802 cagacaagggaatccacaccttttttgatgatcgtgaacttcaaagaggggataaaatcgaacaatcactcaataatgccattgaagagtctaggatttt 26823901  T
Q  311 tattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattc 378  Q
    ||||||||||||||||  |||||||||||||||   |||||| |||||||||||||| ||||| ||||    
T  26823902 tattcctgtgttttctgccaactatgcctcttcttcattttgtttggacgaacttgtccacatcattc 26823969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 143 - 395
Target Start/End: Original strand, 25481636 - 25481888
Alignment:
Q  143 agtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgac 242  Q
    ||||||||||| ||| ||||||| |||||||||  ||  |||||| || |||||||| ||||||||| ||||||||||||| | ||| |||||||||||     
T  25481636 agtgttcctcaatttcaggggcagtgacactcgcaacaattttaccggtaatctctataaggctcttgttgacaagggaattcgtactttcattgatgaa 25481735  T
Q  243 aatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattcctgtgttttctatcaactatgcctctt 342  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||| ||||||  | ||||||  ||||||||| ||||    
T  25481736 aatgatcttcaaagaggagatgaaatcacaccatcacttgtcaaggccattgaagaatctaggatttgtattcccatattttctgccaactatgcatctt 25481835  T
Q  343 caaaattttgcttggacgaacttgttcacattattcattgctataagacaaag 395  Q
    |   |||||| |||||||||||||| ||||| ||||| ||||| |||||||||    
T  25481836 cttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaag 25481888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 143 - 395
Target Start/End: Original strand, 26142759 - 26143011
Alignment:
Q  143 agtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgac 242  Q
    ||||||||||||||| ||||||| |||||||||  ||   ||||| || |||||||| ||||||||| ||||||||||||| | ||| |||||||||||     
T  26142759 agtgttcctcagtttcaggggcagtgacactcgcaacaaatttaccggtaatctctataaggctcttgttgacaagggaattcgtactttcattgatgat 26142858  T
Q  243 aatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattcctgtgttttctatcaactatgcctctt 342  Q
    ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||  | ||||||  ||||||||| ||||    
T  26142859 aatgatcttgaaagaggagatgaaatcacaccatcacttgtcaaggccattgaagaatctaggatttttattcccatattttctgccaactatgcatctt 26142958  T
Q  343 caaaattttgcttggacgaacttgttcacattattcattgctataagacaaag 395  Q
    |   |||||| |||||||||||||| ||||| ||||| ||||| |||||||||    
T  26142959 cttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaag 26143011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 87 - 367
Target Start/End: Original strand, 26861454 - 26861734
Alignment:
Q  87 atggctatgcagtctccttcctcatcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggtttta 186  Q
    ||||||||||| || |||| ||| ||||||||  |||| ||||||||||  ||||| || ||||||||||| || || | |||||||||||| |||||||    
T  26861454 atggctatgcaatcaccttgctcttcctcttccatttcctatggattcaaataccaggtattcctcagtttcagaggaagtgacactcggtatggtttta 26861553  T
Q  187 cgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaa 286  Q
    | || ||||||||||||||||||| |||||||||||| || |||||||| |||||   ||| ||||||||||| |||||||||| |  |||||||  |||    
T  26861554 ccggtaatctctacaaggctcttactgacaagggaattcacaccttcatggatgatcgtgaacttcaaagaggggatgaaatcaaaagatcactcgacaa 26861653  T
Q  287 ggccattgaagaatctagaatttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgt 367  Q
     ||||||||||| ||||||||||| |||||||||||||||  |||||||||||||||   |||||| ||||| ||||||||    
T  26861654 tgccattgaagagtctagaattttcattcctgtgttttctgccaactatgcctcttcgtcattttgtttggatgaacttgt 26861734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 143 - 395
Target Start/End: Original strand, 25538434 - 25538686
Alignment:
Q  143 agtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgac 242  Q
    ||||||||||||||| ||||||| |||||||||  ||   ||||| || |||||||| ||||||||| |||||||||||||   ||| ||||| |||||     
T  25538434 agtgttcctcagtttcaggggcagtgacactcgcaacaaatttaccggtaatctctataaggctcttgttgacaagggaattagtactttcatagatgat 25538533  T
Q  243 aatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattcctgtgttttctatcaactatgcctctt 342  Q
    ||||||||| ||||||||||||||||||||||||||||  |||||||||| |||||||||||||||||||||||  | ||||||  ||||||||| ||||    
T  25538534 aatgatcttgaaagaggagatgaaatcacaccatcacttgtcaaggccatcgaagaatctagaatttttattcccatattttctgccaactatgcatctt 25538633  T
Q  343 caaaattttgcttggacgaacttgttcacattattcattgctataagacaaag 395  Q
    |   |||||| |||||||||||||| || || ||||| ||||| |||||||||    
T  25538634 cttcattttgtttggacgaacttgtccagatcattcactgctacaagacaaag 25538686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 143 - 395
Target Start/End: Original strand, 26055820 - 26056072
Alignment:
Q  143 agtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgac 242  Q
    ||||||||||| ||| ||||||| |||||||||  ||  |||||| || |||||||| ||||||||| |||||||||||||  |||| |||||||||||     
T  26055820 agtgttcctcattttcaggggcagtgacactcgcaacaattttaccggtaatctctataaggctcttgttgacaagggaattaatactttcattgatgaa 26055919  T
Q  243 aatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattcctgtgttttctatcaactatgcctctt 342  Q
    |||||||||||||||||||||||||||||| |||||||  |||||||||| ||||||||| | |||||||||||  | ||||||  ||||||||| ||||    
T  26055920 aatgatcttcaaagaggagatgaaatcacatcatcacttgtcaaggccatcgaagaatctgggatttttattcccatattttctgccaactatgcatctt 26056019  T
Q  343 caaaattttgcttggacgaacttgttcacattattcattgctataagacaaag 395  Q
    |   |||||| |||||||||||||| ||||| ||||| ||||| || ||||||    
T  26056020 cttcattttgtttggacgaacttgtccacatcattcactgctacaacacaaag 26056072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 143 - 395
Target Start/End: Original strand, 26075790 - 26076042
Alignment:
Q  143 agtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgac 242  Q
    ||||||||||| ||| ||||||| |||||||||  ||  |||||| || |||||||| ||||||||| |||||||||||||  |||| |||||||||||     
T  26075790 agtgttcctcaatttcaggggcagtgacactcgcaacaattttaccggtaatctctataaggctcttgttgacaagggaattaatactttcattgatgaa 26075889  T
Q  243 aatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattcctgtgttttctatcaactatgcctctt 342  Q
    |||||||||||||||||||||||||||||| |||||||  |||||||||| ||||||||| | |||||||||||  | ||||||  ||||||||| ||||    
T  26075890 aatgatcttcaaagaggagatgaaatcacatcatcacttgtcaaggccatcgaagaatctgggatttttattcccatattttctgccaactatgcatctt 26075989  T
Q  343 caaaattttgcttggacgaacttgttcacattattcattgctataagacaaag 395  Q
    |   |||||| |||||||||||||| ||||| ||||| ||||| || ||||||    
T  26075990 cttcattttgtttggacgaacttgtccacatcattcactgctacaacacaaag 26076042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 143 - 395
Target Start/End: Original strand, 26048739 - 26048991
Alignment:
Q  143 agtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgac 242  Q
    ||||||||||||||| ||||||| |||||||||  ||  |||||| || |||||||| |||||||| ||||||||||||||   ||| |||||||||||     
T  26048739 agtgttcctcagtttcaggggcagtgacactcgcaacaattttaccggtaatctctataaggctctcattgacaagggaatttgtactttcattgatgat 26048838  T
Q  243 aatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattcctgtgttttctatcaactatgcctctt 342  Q
    ||||||||| ||||||||||||||||||||||   |||  |||||||||| ||||||||||| |||||||||||  | ||||||  ||||||||| ||||    
T  26048839 aatgatcttgaaagaggagatgaaatcacacccaaacttgtcaaggccatggaagaatctaggatttttattcccatattttctgccaactatgcatctt 26048938  T
Q  343 caaaattttgcttggacgaacttgttcacattattcattgctataagacaaag 395  Q
    |   |||||| |||||||||||||| ||||| ||||| ||||| |||||||||    
T  26048939 cttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaag 26048991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 143 - 395
Target Start/End: Original strand, 26069908 - 26070160
Alignment:
Q  143 agtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgac 242  Q
    ||||||||||||||| ||||||| |||||||||  ||  |||||| || |||||||| |||||||| ||||||||||||||   ||| |||||||||||     
T  26069908 agtgttcctcagtttcaggggcagtgacactcgcaacaattttaccggtaatctctataaggctctcattgacaagggaatttgtactttcattgatgat 26070007  T
Q  243 aatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattcctgtgttttctatcaactatgcctctt 342  Q
    ||||||||| ||||||||||||||||||||||   |||  |||||||||| ||||||||||| |||||||||||  | ||||||  ||||||||| ||||    
T  26070008 aatgatcttgaaagaggagatgaaatcacacccaaacttgtcaaggccatggaagaatctaggatttttattcccatattttctgccaactatgcatctt 26070107  T
Q  343 caaaattttgcttggacgaacttgttcacattattcattgctataagacaaag 395  Q
    |   |||||| |||||||||||||| ||||| ||||| ||||| |||||||||    
T  26070108 cttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaag 26070160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 126 - 373
Target Start/End: Original strand, 28234441 - 28234688
Alignment:
Q  126 tatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattgacaagggaatcc 225  Q
    ||||||||||| ||  | |||||||| |||||||| || | ||||||||| || |||||||| |  |||||||| |  ||||||  | ||||||||||||    
T  28234441 tatggattcacctatgacgtgttccttagttttagaggtagtgacactcgctatggttttaccgaaaatctctatagagctctttgtcacaagggaatcc 28234540  T
Q  226 ataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattcctgtgttttc 325  Q
    | ||||||||||||||||  || |||||| ||||||||||||| |||||||||||  |||||||||||||||| ||||| ||||| |||||||| || ||    
T  28234541 acaccttcattgatgacagggagcttcaaggaggagatgaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcctgtcttgtc 28234640  T
Q  326 tatcaactatgcctcttcaaaattttgcttggacgaacttgttcacat 373  Q
    |||||| ||||| |||||   ||||||||||||||||||||| |||||    
T  28234641 tatcaattatgcttcttcttcattttgcttggacgaacttgtccacat 28234688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 114 - 384
Target Start/End: Original strand, 28226815 - 28227085
Alignment:
Q  114 tcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattg 213  Q
    ||||| || |||||||||||||| ||  | |||||||| |||||||| || | ||||||||| || |||||||| || ||||||||||  | ||||  |     
T  28226815 tcttccttctcttatggattcacctatgacgtgttccttagttttagaggtattgacactcgttatggttttactggaaatctctacagtgatctttgta 28226914  T
Q  214 acaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttat 313  Q
    | |||||||| || || ||| ||||||| |  || |||||| |||| |||||||| ||| |||||||  |||||| ||||||||||||||| ||||| ||    
T  28226915 agaagggaattcacacattctttgatgatagagagcttcaaggaggtgatgaaataacatcatcacttttcaaggtcattgaagaatctaggattttcat 28227014  T
Q  314 tcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgct 384  Q
    |||||| || |||||||| ||||| |||||   ||||||||||||||||||||| ||||| ||||||||||    
T  28227015 tcctgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtccacatcattcattgct 28227085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 16 - 247
Target Start/End: Complemental strand, 27428020 - 27427792
Alignment:
Q  16 accacaaaaacttactcattcatattctgcattctcaaactcnnnnnnncatccaatttctcacaattttcatggctatgcagtctccttcctcatcctc 115  Q
    ||||||||||| | ||||||||||||||||||||||||||||       ||||  ||||||| ||||| ||||||| ||||| |  |||| ||  |||||    
T  27428020 accacaaaaacatcctcattcatattctgcattctcaaactcttct---catcttatttctctcaattctcatggccatgcaattacctttctattcctc 27427924  T
Q  116 ttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattgac 215  Q
    ||||||||| |||| ||||| |||| | |||||||||| || || |||||| ||||||||||||||||| || ||||||||||  |||||||||||||||    
T  27427923 ttcattttcctatgcattcagttacgatgtgttcctcatttgtaagggcaccgacactcggtacggtttcaccggcaatctcttgaaggctcttattgac 27427824  T
Q  216 aagggaatccataccttcattgatgacaatga 247  Q
    |||||||| | |||||||  ||||||| ||||    
T  27427823 aagggaattcgtaccttccatgatgacgatga 27427792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 111 - 384
Target Start/End: Original strand, 28325343 - 28325616
Alignment:
Q  111 tcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctctta 210  Q
    |||||||| ||||| ||||||||||| ||  | |||||||| |||||||| || | ||||||||| || |||||||| || ||||||||||| | ||||     
T  28325343 tcctcttccttttcctatggattcacctatgacgtgttccttagttttagaggtagtgacactcgttatggttttactggaaatctctacaaagatcttt 28325442  T
Q  211 ttgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttt 310  Q
     |   ||| |||| | |||||||||||||||||| || |||||| |||| || ||||| ||||| |||||  |||||||||||||||| ||||| |||||    
T  28325443 gtaggaagagaattcgtaccttcattgatgacaaagaccttcaacgaggtgacgaaataacaccgtcacttttcaaggccattgaagagtctaggatttt 28325542  T
Q  311 tattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgct 384  Q
     |||||| | || |||||||| ||||| |||||    ||||||||||| |||||||| ||||||||||| ||||    
T  28325543 cattcctattttgtctatcaattatgcttcttcttccttttgcttggatgaacttgtccacattattcactgct 28325616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 253 - 370
Target Start/End: Complemental strand, 25507092 - 25506975
Alignment:
Q  253 aaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattcctgtgttttctatcaactatgcctcttcaaaattttg 352  Q
    |||||||||||||||||||||||||| || |||  ||||||||||||||||| ||||||||||| ||  |||||||||||||||||||||||||||||||    
T  25507092 aaagaggagatgaaatcacaccatcagtcgtcatcgccattgaagaatctaggatttttattccggttctttctatcaactatgcctcttcaaaattttg 25506993  T
Q  353 cttggacgaacttgttca 370  Q
     ||||| |||||||||||    
T  25506992 tttggaggaacttgttca 25506975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 105 - 373
Target Start/End: Original strand, 28185222 - 28185490
Alignment:
Q  105 tcctcatcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaagg 204  Q
    |||||||||||||| || || ||||||||||| ||  | |||||||| || ||||| || | ||||||||| ||  ||||||| || |||||| | |  |    
T  28185222 tcctcatcctcttccttctcctatggattcacctatgacgtgttccttagctttagaggtagtgacactcgttatcgttttactggaaatctcaatagag 28185321  T
Q  205 ctcttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctag 304  Q
    |||||  ||||||||||||||  |||||||| |||||||  || |||||| |||| || ||||| ||| |||||||  |||||||||||||||| |||||    
T  28185322 ctctttgtgacaagggaatccgaaccttcatggatgacagagagcttcaaggaggtgaagaaataacatcatcacttttcaaggccattgaagagtctag 28185421  T
Q  305 aatttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacat 373  Q
     ||||| ||||| || || |||||||| ||||| |||||   ||||||||||||||||||||| |||||    
T  28185422 gattttcattcccgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtccacat 28185490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 105 - 384
Target Start/End: Original strand, 28180970 - 28181249
Alignment:
Q  105 tcctcatcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaagg 204  Q
    |||||||||||||| || || ||||||||||| ||  | | |||||| || ||||| ||   ||||||||| || |||||||| || |||||| | |  |    
T  28180970 tcctcatcctcttccttctcctatggattcacctatgacgcgttccttagctttagaggtggtgacactcgttatggttttactggaaatctcaatagag 28181069  T
Q  205 ctcttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctag 304  Q
    |||||  ||||||||||||||  |||||||| |||||||  || |||||| |||| || ||||| ||| |||||||  |||||||||||||||| |||||    
T  28181070 ctctttgtgacaagggaatccgaaccttcatggatgacagagagcttcaaggaggtgaagaaataacatcatcacttttcaaggccattgaagagtctag 28181169  T
Q  305 aatttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgct 384  Q
     ||||| ||||| || || |||||||| ||||| |||||   ||||||||||||||||||||| ||||| ||||| ||||    
T  28181170 gattttcattcccgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtccacatcattcactgct 28181249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 147 - 384
Target Start/End: Original strand, 28242702 - 28242939
Alignment:
Q  147 ttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgacaatg 246  Q
    ||||| |||||||| || | ||||||||| || |||||||| || ||||||||||| | ||||  | | |||||||| |  ||||||||||||||||  |    
T  28242702 ttccttagttttagaggtagtgacactcgttatggttttactggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagag 28242801  T
Q  247 atcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattcctgtgttttctatcaactatgcctcttcaaa 346  Q
    | |||| | |||| ||  |||| |||||||||||  |||||||||||||||| ||||| ||||| |||||||| || |||||||| ||||| |||||       
T  28242802 aacttccaggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcctgtcttgtctatcaattatgcttcttcttc 28242901  T
Q  347 attttgcttggacgaacttgttcacattattcattgct 384  Q
    ||||||||||||||||||||| ||||| ||||| ||||    
T  28242902 attttgcttggacgaacttgtccacatcattcactgct 28242939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 81 - 373
Target Start/End: Original strand, 28139373 - 28139665
Alignment:
Q  81 attttcatggctatgcagtctccttcctcatcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacg 180  Q
    |||||||||||| ||||  | ||||| || ||  |||| || || ||||| ||||| ||| | || || ||||| || || |||| ||||||||| | ||    
T  28139373 attttcatggctttgcaaccaccttcttcttctacttctttctcctatggcttcacatacgatgtctttctcagcttcagaggcagtgacactcgtttcg 28139472  T
Q  181 gttttacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcact 280  Q
    |||| || || ||||||||||| ||||||  ||||   |||||||| || || |||||||| |  || |||||| |||| || |||||  |||| |||||    
T  28139473 gtttcactggaaatctctacaaagctcttcgtgactgtggaatccacacttttattgatgatagggagcttcaaggaggtgacgaaatatcaccgtcact 28139572  T
Q  281 catcaaggccattgaagaatctagaatttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacat 373  Q
    | | || ||||||||||||||||| ||||| || ||||||||||| |||||||||||||||||    |||||||||||||||||||| |||||    
T  28139573 cgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttcttcgttttgcttggacgaacttgtccacat 28139665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 223 - 398
Target Start/End: Original strand, 28149912 - 28150086
Alignment:
Q  223 tccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattcctgtgtt 322  Q
    |||| |||||||||||||| |  || ||| || |||| || |||||||||||||||||| |||||||||||||||| || || ||||| |||||  | ||    
T  28149912 tccacaccttcattgatgatacggagctttaacgaggggacgaaatcacaccatcactc-tcaaggccattgaagagtccaggattttcattccaatctt 28150010  T
Q  323 ttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggt 398  Q
     |||||||||||| | |||||   |||||| |||||||||||||| ||||||||||| ||||  ||| ||||||||    
T  28150011 ctctatcaactatacttcttcttcattttgtttggacgaacttgtccacattattcactgcttcaaggcaaagggt 28150086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 144 - 384
Target Start/End: Original strand, 26848555 - 26848795
Alignment:
Q  144 gtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgaca 243  Q
    |||||| | ||||| |||||||| |||||| | | | |||| || || |||||||| || ||||||  |||||| |||||||  ||||||||||||||||    
T  26848555 gtgttcattagtttcaggggcaccgacactagattcagtttcactggtaatctctataaagctctttctgacaatggaatccgaaccttcattgatgaca 26848654  T
Q  244 atgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattcctgtgttttctatcaactatgcctcttc 343  Q
    | |||||||| || || ||||| |||||||| || ||| |||||  ||||||||| || || ||||  |||| ||| || |||   ||||||||| ||||    
T  26848655 aggatcttcagagtggtgatgagatcacaccttcgctcctcaagaacattgaagactcgaggatttccattcttgtattctctgagaactatgccacttc 26848754  T
Q  344 aaaattttgcttggacgaacttgttcacattattcattgct 384  Q
        ||||| |||||||||||||| ||||| ||||||||||    
T  26848755 ttcgttttgtttggacgaacttgtccacatcattcattgct 26848795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 103 - 379
Target Start/End: Complemental strand, 28098702 - 28098426
Alignment:
Q  103 cttcctcatcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaa 202  Q
    ||||||| | ||||||||| |||||||||||||| ||  | ||||| || | |||||||||||| ||||||||||| |||||||| || |||||||||||    
T  28098702 cttcctctttctcttcattctcttatggattcacctatgacgtgtttcttaattttaggggcaccgacactcggtatggttttactggaaatctctacaa 28098603  T
Q  203 ggctcttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatct 302  Q
     ||||||  ||||   ||| |||  |||||||||||  | || ||||||||   ||| |||  |||||||| ||| ||  |||||||||| ||||| ||     
T  28098602 agctctttgtgacggaggagtccgcaccttcattgaccataaagatcttcatgaaggtgatagaatcacacaatcccttgtcaaggccatcgaagagtcc 28098503  T
Q  303 agaatttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattca 379  Q
    || ||||| ||||| || || ||||  |||||||| |||||    ||||| ||||| |||||||| ||||| |||||    
T  28098502 aggattttaattccggtcttctctaagaactatgcttcttctttgttttgtttggatgaacttgtccacatcattca 28098426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 113 - 384
Target Start/End: Complemental strand, 26342257 - 26341986
Alignment:
Q  113 ctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttatt 212  Q
    ||||||||| || ||||||||||| ||  | |||||||||| ||||||||||| || |||||| || |||||||| |||||| |||| |  |||||   |    
T  26342257 ctcttcattctcatatggattcacatatgatgtgttcctcaattttaggggcattggcactcgctatggttttactggcaatatctatagagctctatgt 26342158  T
Q  213 gacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaattttta 312  Q
    |||   ||| |||  |||||||||||||| |  || |||||  |||| ||  ||||||||| ||||||  |||| ||||||||||| || || ||||| |    
T  26342157 gacggtggagtccgcaccttcattgatgatagggagcttcatggaggtgacaaaatcacacaatcacttgtcaaagccattgaagagtccaggattttca 26342058  T
Q  313 ttcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgct 384  Q
    ||||  | || || ||||||||||| |||||    ||||| |||||||||||||| ||||| ||||||||||    
T  26342057 ttccaattttctcaatcaactatgcttcttcttcgttttgtttggacgaacttgtccacatcattcattgct 26341986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 126 - 364
Target Start/End: Complemental strand, 26893781 - 26893543
Alignment:
Q  126 tatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattgacaagggaatcc 225  Q
    ||||||||||| ||| | || ||||||| |||||| ||| |||||||||| |  |||||||||||  |||| || || ||||||  ||| |  ||||| |    
T  26893781 tatggattcacctacgatgtcttcctcaattttagaggctctgacactcgttttggttttacgggtcatctttataaagctctttgtgatagtggaattc 26893682  T
Q  226 ataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattcctgtgttttc 325  Q
    | |||||||||||||| |  || ||||| ||||| || |||||| |||||||||| |||||||| |||||||| ||||  || |  ||||| ||  | ||    
T  26893681 acaccttcattgatgatacagagcttcatagaggtgacgaaatctcaccatcacttatcaaggcaattgaagagtctatgatatacattccagtcctctc 26893582  T
Q  326 tatcaactatgcctcttcaaaattttgcttggacgaact 364  Q
    |||||||||||| ||||| | |||||| ||||| |||||    
T  26893581 tatcaactatgcttcttctatattttgtttggaagaact 26893543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 111 - 384
Target Start/End: Complemental strand, 28298038 - 28297765
Alignment:
Q  111 tcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctctta 210  Q
    |||||||| || || |||||||||||| |  | || ||||| |||||||| || | |||||| || ||| ||||||  || |||||| |||| | ||||     
T  28298038 tcctcttccttctcctatggattcactcatgacgttttcctaagttttagaggtagtgacacacgctacagttttattggaaatctccacaaagatcttt 28297939  T
Q  211 ttgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttt 310  Q
     |   |||||||| |  ||||||||||||||||  || ||| || |||| || ||||| |||||||||||  |||||  |||||||||  |||| |||||    
T  28297938 gtaggaagggaattcgcaccttcattgatgacagagagcttaaaggaggtgacgaaataacaccatcacttttcaagcacattgaagagactaggatttt 28297839  T
Q  311 tattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgct 384  Q
     |||||||| || |||| ||| ||||| |||||   ||||||||||||||||||||| ||||| ||||| ||||    
T  28297838 cattcctgtcttatctaccaattatgcttcttcttcattttgcttggacgaacttgtccacatcattcactgct 28297765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 111 - 384
Target Start/End: Original strand, 28514035 - 28514308
Alignment:
Q  111 tcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctctta 210  Q
    |||||||| || || |||||||||||| |  | || ||||| |||||||| || | |||||| || ||| ||||||  || |||||| |||| | ||||     
T  28514035 tcctcttccttctcctatggattcactcatgacgttttcctaagttttagaggtagtgacacacgctacagttttattggaaatctccacaaagatcttt 28514134  T
Q  211 ttgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttt 310  Q
     |   |||||||| |  ||||||||||||||||  || ||| || |||| || ||||| |||||||||||  |||||  |||||||||  |||| |||||    
T  28514135 gtaggaagggaattcgcaccttcattgatgacagagagcttaaaggaggtgacgaaataacaccatcacttttcaagcacattgaagagactaggatttt 28514234  T
Q  311 tattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgct 384  Q
     |||||||| || |||| ||| ||||| |||||   ||||||||||||||||||||| ||||| ||||| ||||    
T  28514235 cattcctgtcttatctaccaattatgcttcttcttcattttgcttggacgaacttgtccacatcattcactgct 28514308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 109 - 373
Target Start/End: Original strand, 26936954 - 26937218
Alignment:
Q  109 catcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctct 208  Q
    |||| ||||| || |||||||||||||| ||  | |||||||||||||| || ||||| |||||||| | |  |||||  ||  |||| ||||| |||||    
T  26936954 catcatcttccttctcttatggattcacctatgacgtgttcctcagtttcagaggcaccgacactcgcttccattttattggtcatctttacaaagctct 26937053  T
Q  209 tattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatt 308  Q
    |  |||    ||||| |  ||||||||||||||||| || || ||  ||||||| |||||||||||||||||  ||||||| |||||||| ||  | |||    
T  26937054 ttgtgattgtggaattcgcaccttcattgatgacaaggagctccatggaggagaagaaatcacaccatcacttgtcaaggcaattgaagattccgggatt 26937153  T
Q  309 tttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacat 373  Q
       || ||||| || ||||||||||||||| ||||   |||||| |||||||||||||| |||||    
T  26937154 gccatacctgtattctctatcaactatgccacttcttcattttgtttggacgaacttgtccacat 26937218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 180 - 304
Target Start/End: Original strand, 29825958 - 29826082
Alignment:
Q  180 ggttttacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcac 279  Q
    |||||||| |||||||||||||| ||||| | |||||||  ||| |  ||||||||||||||||| || ||||||||||| || ||||||||||| ||||    
T  29825958 ggttttaccggcaatctctacaaagctctaactgacaagaaaattcgcaccttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctcac 29826057  T
Q  280 tcatcaaggccattgaagaatctag 304  Q
    |  | ||||| ||| ||||||||||    
T  29826058 ttgtgaaggcaattcaagaatctag 29826082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 144 - 298
Target Start/End: Original strand, 26635585 - 26635739
Alignment:
Q  144 gtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgaca 243  Q
    |||||| | ||||| |||||||| |||||||  | |||||| || || || ||||| || ||||||  |||||| |||||| | ||||||||||||||||    
T  26635585 gtgttcattagtttcaggggcaccgacactcaattcggtttcaccggtaacctctataaagctctttctgacaaaggaatcaacaccttcattgatgaca 26635684  T
Q  244 atgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaaga 298  Q
    | || ||| ||| ||| |||||||||||||| || ||| |||||  |||||||||    
T  26635685 aggagcttaaaaaaggggatgaaatcacaccttcgctcctcaagagcattgaaga 26635739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 144 - 298
Target Start/End: Original strand, 26741551 - 26741705
Alignment:
Q  144 gtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgaca 243  Q
    |||||| | ||||| |||||||| |||||||  | |||||| || || || ||||| || ||||||  |||||| |||||| | ||||||||||||||||    
T  26741551 gtgttcattagtttcaggggcaccgacactcaattcggtttcaccggtaacctctataaagctctttctgacaaaggaatcaacaccttcattgatgaca 26741650  T
Q  244 atgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaaga 298  Q
    | || ||| ||| ||| |||||||||||||| || ||| |||||  |||||||||    
T  26741651 aggagcttaaaaaaggggatgaaatcacaccttcgctcctcaagagcattgaaga 26741705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 144 - 308
Target Start/End: Original strand, 25071554 - 25071718
Alignment:
Q  144 gtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgaca 243  Q
    |||||| | ||||| ||||| || |||||||| | ||||||||| || ||||| || || ||||||  |||||| |||||||| ||||| ||||||||||    
T  25071554 gtgttcattagtttcaggggtaccgacactcgattcggttttaccggtaatctttataaagctctttctgacaaaggaatccacacctttattgatgaca 25071653  T
Q  244 atgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatt 308  Q
    | || ||| | ||||| || ||||||||||| || |||  ||||  ||||||||| || ||||||    
T  25071654 aagagcttaagagaggtgacgaaatcacaccttcgctccgcaagagcattgaagattcgagaatt 25071718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 168 - 308
Target Start/End: Original strand, 26949580 - 26949720
Alignment:
Q  168 gacactcggtacggttttacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaa 267  Q
    |||||||| | |||||| || || |||||||| || |||||   ||||||||||||||  |||||||||||||| || || ||||| | ||| || ||||    
T  26949580 gacactcgattcggtttcaccggtaatctctataaagctctctctgacaagggaatccgaaccttcattgatgataaggagcttcagaaaggtgacgaaa 26949679  T
Q  268 tcacaccatcactcatcaaggccattgaagaatctagaatt 308  Q
    ||||||| |||||| |||||   ||||||||||| ||||||    
T  26949680 tcacaccttcactcctcaagagaattgaagaatcgagaatt 26949720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 144 - 272
Target Start/End: Original strand, 27214312 - 27214440
Alignment:
Q  144 gtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgaca 243  Q
    |||||| | ||||| ||||| || ||||||||  ||||||| || || |||||||| || ||||||  |||||| |||||||  ||||||||||||||||    
T  27214312 gtgttcattagtttcaggggtaccgacactcgacacggtttcaccggtaatctctataaagctctttgtgacaaaggaatccgaaccttcattgatgaca 27214411  T
Q  244 atgatcttcaaagaggagatgaaatcaca 272  Q
    | || ||||| ||||| || |||||||||    
T  27214412 aggagcttcagagaggtgacgaaatcaca 27214440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 144 - 272
Target Start/End: Complemental strand, 27234916 - 27234788
Alignment:
Q  144 gtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgaca 243  Q
    |||||| | ||||| ||||| || ||||||||  ||||||| || || |||||||| || ||||||  |||||| |||||||  ||||||||||||||||    
T  27234916 gtgttcattagtttcaggggtaccgacactcgacacggtttcaccggtaatctctataaagctctttgtgacaaaggaatccgaaccttcattgatgaca 27234817  T
Q  244 atgatcttcaaagaggagatgaaatcaca 272  Q
    | || ||||| ||||| || |||||||||    
T  27234816 aggagcttcagagaggtgacgaaatcaca 27234788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 189 - 274
Target Start/End: Original strand, 26617266 - 26617351
Alignment:
Q  189 ggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacacc 274  Q
    ||||||||||| || ||||||  |||||| ||| |||  ||||||||||||||||| || ||||| ||||| ||||||||||||||    
T  26617266 ggcaatctctataaagctctttgtgacaaaggagtccgaaccttcattgatgacaaggagcttcagagaggtgatgaaatcacacc 26617351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 189 - 274
Target Start/End: Original strand, 26723194 - 26723279
Alignment:
Q  189 ggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacacc 274  Q
    ||||||||||| || ||||||  |||||| ||| |||  ||||||||||||||||| || ||||| ||||| ||||||||||||||    
T  26723194 ggcaatctctataaagctctttgtgacaaaggagtccgaaccttcattgatgacaaggagcttcagagaggtgatgaaatcacacc 26723279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 153 - 274
Target Start/End: Original strand, 26959069 - 26959190
Alignment:
Q  153 agttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgacaatgatcttc 252  Q
    ||||| |||||||| |||||||| | | |||| || || || ||||| || ||||||  |||||| |||||| | ||||||||||||||||| || |||     
T  26959069 agtttcaggggcaccgacactcgattcagtttcaccggtaacctctataaagctctttctgacaaaggaatcgacaccttcattgatgacaaagagctta 26959168  T
Q  253 aaagaggagatgaaatcacacc 274  Q
    ||| ||| ||||||||||||||    
T  26959169 aaaaaggggatgaaatcacacc 26959190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 144 - 281
Target Start/End: Complemental strand, 27665409 - 27665272
Alignment:
Q  144 gtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgaca 243  Q
    |||||| | ||||| ||||| || |||||||| |  ||||| || || || ||||| |||||||||  |||||| |||||||| ||||||||||||||||    
T  27665409 gtgttcattagtttcaggggtaccgacactcgatttggtttcaccggtaacctctataaggctctttctgacaaaggaatccacaccttcattgatgaca 27665310  T
Q  244 atgatcttcaaagaggagatgaaatcacaccatcactc 281  Q
    | || |||| ||  || || ||||||||||| ||||||    
T  27665309 aggagcttccaactggtgacgaaatcacaccttcactc 27665272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 193 - 296
Target Start/End: Original strand, 26811453 - 26811556
Alignment:
Q  193 atctctacaaggctcttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccat 292  Q
    ||||||| || ||||||  |||||| |||||||  ||||||||||||||||| || ||||| ||||| || ||||||||||| || ||| |||||  |||    
T  26811453 atctctataaagctctttgtgacaaaggaatccgaaccttcattgatgacaaggagcttcagagaggtgacgaaatcacaccttcgctcctcaagagcat 26811552  T
Q  293 tgaa 296  Q
    ||||    
T  26811553 tgaa 26811556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 249 - 403
Target Start/End: Original strand, 2184288 - 2184442
Alignment:
Q  249 cttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattcctgtgttttctatcaactatgcctcttcaaaat 348  Q
    |||||| |||| | |||||| ||| ||||||| || || ||||||||||| || |||||||| || ||||| || || |  |||||||| |||||   ||    
T  2184288 cttcaacgagggggtgaaataacagcatcacttatgaaagccattgaagagtccagaattttcatccctgttttctcaaagaactatgcttcttcttcat 2184387  T
Q  349 tttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcct 403  Q
    |||| |||||||||||||| ||||| |||| || ||  ||| ||||||| |||||    
T  2184388 tttgtttggacgaacttgtccacatcattcgttactccaagtcaaagggacgcct 2184442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 43
Target Start/End: Complemental strand, 27338482 - 27338450
Alignment:
Q  11 cacagaccacaaaaacttactcattcatattct 43  Q
    |||||||||||||||||||||||||||||||||    
T  27338482 cacagaccacaaaaacttactcattcatattct 27338450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 43
Target Start/End: Complemental strand, 27399222 - 27399190
Alignment:
Q  11 cacagaccacaaaaacttactcattcatattct 43  Q
    |||||||||||||||||||||||||||||||||    
T  27399222 cacagaccacaaaaacttactcattcatattct 27399190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 296
Target Start/End: Complemental strand, 28491744 - 28491660
Alignment:
Q  212 tgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaa 296  Q
    |||||| ||| ||| ||| ||||| || ||| | || ||||||| ||| || ||||||||||||||||||||||| |||||||||    
T  28491744 tgacaaaggagtccgtactttcatggacgacgaggagcttcaaaaaggtgaagaaatcacaccatcactcatcaaagccattgaa 28491660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 296
Target Start/End: Complemental strand, 29804154 - 29804070
Alignment:
Q  212 tgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaa 296  Q
    |||||| ||| ||| ||| ||||| || ||| | || ||||||| ||| || ||||||||||||||||||||||| |||||||||    
T  29804154 tgacaaaggagtccgtactttcatggacgacgaggagcttcaaaaaggtgaagaaatcacaccatcactcatcaaagccattgaa 29804070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 231 - 402
Target Start/End: Original strand, 2184880 - 2185051
Alignment:
Q  231 ttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattcctgtgttttctatca 330  Q
    ||||| |||||| | || |||||| |||| | |||||| |||||||| ||  | || |||||||||||||| |||||||| || ||||| || || |       
T  2184880 ttcatggatgacgaagagcttcaacgagggggtgaaataacaccatcgcttgtgaaagccattgaagaatccagaattttcatccctgttttctcaaagg 2184979  T
Q  331 actatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcc 402  Q
    ||||||| |||||   |||||| |||||||||||||| || || |||| |||||  ||| ||||||| ||||    
T  2184980 actatgcttcttcttcattttgtttggacgaacttgtccatatcattcgttgctccaagtcaaagggacgcc 2185051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 219 - 298
Target Start/End: Original strand, 29467797 - 29467876
Alignment:
Q  219 ggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaaga 298  Q
    ||||| || |||||||| |||||  | || ||||||| ||| || ||||||||||||||||||||||| || ||||||||    
T  29467797 ggaattcacaccttcatggatgatgaagaacttcaaaaaggcgaagaaatcacaccatcactcatcaaagctattgaaga 29467876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 168 - 298
Target Start/End: Original strand, 26974971 - 26975101
Alignment:
Q  168 gacactcggtacggttttacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaa 267  Q
    |||||||| | |||||| || || || ||||| || ||||||  |||||| |||||| | | ||||||||||||||| || ||| ||| ||| || ||||    
T  26974971 gacactcgattcggtttcaccggtaacctctataaagctctttctgacaaaggaatcaacatcttcattgatgacaaggagcttaaaaaaggggacgaaa 26975070  T
Q  268 tcacaccatcactcatcaaggccattgaaga 298  Q
    ||||||| || ||| |||||  |||||||||    
T  26975071 tcacaccttcgctcctcaagagcattgaaga 26975101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 270; Significance: 1e-151; HSPs: 2)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 11 - 406
Target Start/End: Complemental strand, 14056 - 13662
Alignment:
Q  11 cacagaccacaaaaacttactcattcatattctgcattctcaaactcnnnnnnncatccaatttctcacaattttcatggctatgcagtctccttcctca 110  Q
    ||||||||||||||||  |||||||||||||||| ||||||||||||       ||||||||||||| ||||| ||||||||||||| |  ||||||||     
T  14056 cacagaccacaaaaacaaactcattcatattctgaattctcaaactctttttt-catccaatttctctcaattatcatggctatgcaattaccttcctct 13958  T
Q  111 tcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctctta 210  Q
    |||||||||||||| | || |||||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||    
T  13957 tcctcttcattttcctctgcattcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccggcaatctctacaaggctctta 13858  T
Q  211 ttgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttt 310  Q
     ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||    
T  13857 ctgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttt 13758  T
Q  311 tattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgt 406  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  13757 tattcctgtgttttctatcaactacgccacttcaaaattttgcttggacgaacttgttcacattattcattgctacaagacaaaaggtcgcctcgt 13662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #2
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 11 - 406
Target Start/End: Complemental strand, 5100 - 4701
Alignment:
Q  11 cacagaccacaaaaacttactcatt-----catattctgcattctcaaactcnnnnnnncatccaatttctcacaattttcatggctatgcagtctcctt 105  Q
    ||||||||||||||||||| |||||     ||||||||| ||||||||||||       ||||||||||||| ||||| | |||||||| || || ||||    
T  5100 cacagaccacaaaaacttattcattaaattcatattctgaattctcaaactctttttt-catccaatttctctcaattcttatggctatacaatcacctt 5002  T
Q  106 cctcatcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggc 205  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||  |||||||||| || ||||||||||||||    
T  5001 cctcatcctcttcattttcctatggattcacttaccaagtgttcctcagttttaggggcattgacactcgccacggttttaccggaaatctctacaaggc 4902  T
Q  206 tcttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctaga 305  Q
    ||||| ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||| ||||||||     
T  4901 tcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatccctccgcaaggccattgatgaatctagg 4802  T
Q  306 atttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcg 405  Q
    ||||||||||||||||||||||||  |||||||| |||    ||||| |||||||||||||| ||||| ||||| ||||| |||||||||||||||||||    
T  4801 atttttattcctgtgttttctatcttctatgccttttcttcgttttgtttggacgaacttgtccacataattcactgctacaagacaaagggtcgcctcg 4702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 258; Significance: 1e-143; HSPs: 3)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 12 - 406
Target Start/End: Complemental strand, 3844 - 3451
Alignment:
Q  12 acagaccacaaaaacttactcattcatattctgcattctcaaactcnnnnnnncatccaatttctcacaattttcatggctatgcagtctccttcctcat 111  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||       ||||| ||||||| ||||| |||||||||| || || ||||||||||    
T  3844 acagaccacaaaaatttac-cattcatattctgcattctcaaactctttttt-catcctatttctctcaattgtcatggctatacaatcaccttcctcat 3747  T
Q  112 cctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttat 211  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| || |||||||||||||||||||     
T  3746 cctcttcattttcctatggattcacttaccaagtgttccttagttttaggggcactgacactcggcacggttttaccggaaatctctacaaggctcttac 3647  T
Q  212 tgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaattttt 311  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||    
T  3646 tgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggattttt 3547  T
Q  312 attcctgtgttttctatcaa-ctatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgt 406  Q
    |||||||||||||||||||| ||||||||||||   |||||| |||||||||||||| ||||| ||||| ||||| ||||||||||||||||||||    
T  3546 attcctgtgttttctatcaacctatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagggtcgcctcgt 3451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #2
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 22 - 406
Target Start/End: Complemental strand, 14767 - 14386
Alignment:
Q  22 aaaacttactcattcatattctgcattctcaaactcnnnnnnncatccaatttctcacaattttcatggctatgcagtctccttcctcatcctcttcatt 121  Q
    |||| |||||||||||||||||||||||||||||||       ||||| ||||||| ||||| |||||||||| || || |||||||||||| |||||||    
T  14767 aaaatttactcattcatattctgcattctcaaactcttttt--catcctatttctctcaattctcatggctatacaatcaccttcctcatccacttcatt 14670  T
Q  122 ttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattgacaaggga 221  Q
    ||| |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||| ||||||||||    
T  14669 ttcctatggattcacttaccaagtgttcatcagttttaggggcactgacactcggcacggttttaccggaaatctctacaaggctcttactgacaaggga 14570  T
Q  222 atccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattcctgtgt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||    
T  14569 atccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatttttattcctgtgt 14470  T
Q  322 tttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgt 406  Q
    |||||||||||||||||| |||    ||||| |||||||||||||| ||||| ||||| ||||| ||||||||||||||||||||    
T  14469 tttctatcaactatgcct-ttcttcgttttgtttggacgaacttgtccacataattcactgctacaagacaaagggtcgcctcgt 14386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 11 - 176
Target Start/End: Complemental strand, 8225 - 8061
Alignment:
Q  11 cacagaccacaaaaacttactcattcatattctgcattctcaaactcnnnnnnncatccaatttctcacaattttcatggctatgcagtctccttcctca 110  Q
    |||||| |||||||| | |||||||||||||||||||||||||||||       ||||| ||||||| ||||| |||||||||| || || |||||||||    
T  8225 cacagaacacaaaaattcactcattcatattctgcattctcaaactctttttt-catcctatttctctcaattctcatggctatacaatcaccttcctca 8127  T
Q  111 tcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcgg 176  Q
    ||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8126 tcctcttcattctcccatggattcacttaccaagtgttcctcagttttaggggcactgacactcgg 8061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 248; Significance: 1e-137; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 11 - 406
Target Start/End: Original strand, 7295 - 7682
Alignment:
Q  11 cacagaccacaaaaacttactcattcatattctgcattctcaaactcnnnnnnncatccaatttctcacaattttcatggctatgcagtctccttcctca 110  Q
    |||||||||||||||||||||||||||||||||       |||||||       |||| |||||||| ||||| ||||||||||||| || ||| ||||     
T  7295 cacagaccacaaaaacttactcattcatattct-------caaactctttttt-catctaatttctctcaattctcatggctatgcaatcacctccctct 7386  T
Q  111 tcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctctta 210  Q
    |||||||||||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||    
T  7387 tcctcttcattttcatatgcattcacttaccaagtgttccttagttttaggggcactgacactcgccacggttttaccggcaatctctacaaggctctta 7486  T
Q  211 ttgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttt 310  Q
     ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||    
T  7487 ctgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttt 7586  T
Q  311 tattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgt 406  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| | |||||||||||    
T  7587 tattcctgtgttttctatcaactacgccacttcaaaattttgcttggacgaacttgttcacattattcattgctacaagacagaaggtcgcctcgt 7682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1254 (Bit Score: 206; Significance: 1e-112; HSPs: 1)
Name: scaffold1254
Description:

Target: scaffold1254; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 11 - 352
Target Start/End: Complemental strand, 334 - 1
Alignment:
Q  11 cacagaccacaaaaacttactcattcatattctgcattctcaaactcnnnnnnncatccaatttctcacaattttcatggctatgcagtctccttcctca 110  Q
    |||||||||||||||||||||||||||||||||       |||||||       |||| |||||||| ||||| ||||||||||||| || ||| ||||     
T  334 cacagaccacaaaaacttactcattcatattct-------caaactctttttt-catctaatttctctcaattctcatggctatgcaatcacctccctct 243  T
Q  111 tcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctctta 210  Q
    |||||||||||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||    
T  242 tcctcttcattttcatatgcattcacttaccaagtgttccttagttttaggggcactgacactcgccacggttttaccggcaatctctacaaggctctta 143  T
Q  211 ttgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttt 310  Q
     ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||    
T  142 ctgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttt 43  T
Q  311 tattcctgtgttttctatcaactatgcctcttcaaaattttg 352  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  42 tattcctgtgttttctatcaactacgccacttcaaaattttg 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 189; Significance: 1e-102; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 13 - 406
Target Start/End: Complemental strand, 18699807 - 18699417
Alignment:
Q  13 cagaccacaaaaacttactcattcatattctgcattctcaaactcnnnnnnncatccaatttctcacaattttcatggctatgcagtctccttcctcatc 112  Q
    |||||||||||||||||  |  |||||||||||||||||||||||       |||| | |||||| ||||| ||||||||||||| || |||||||||||    
T  18699807 cagaccacaaaaacttaacc--tcatattctgcattctcaaactctttttt-catctagtttctctcaattctcatggctatgcaatcaccttcctcatc 18699711  T
Q  113 ctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttatt 212  Q
    |||||||||||| ||| ||||||||||||||||||||||||| || |||||||||||||||||  |||||||||| ||| |||||||||| ||||||| |    
T  18699710 ctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcactgacactcgtgacggttttactggccatctctacaaagctcttact 18699611  T
Q  213 gacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaattttta 312  Q
    |||||||||||||| |||||||||||||||  ||| || ||||| || |||||||||| ||||||||||  ||| ||||||||||| ||||| || || |    
T  18699610 gacaagggaatccacaccttcattgatgaccgtgacctgcaaagtggggatgaaatcaaaccatcactcgacaatgccattgaagagtctaggatcttca 18699511  T
Q  313 ttcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgt 406  Q
    |||||||||||||||||||||||||||||||   |||||| |||||||||||||||||||| ||||| ||||| |||||||| ||||| |||||    
T  18699510 ttcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgttcacatcattcactgctacaagacaaaaggtcgtctcgt 18699417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 11 - 400
Target Start/End: Complemental strand, 18679976 - 18679590
Alignment:
Q  11 cacagaccacaaaaacttactcattcatattctgcattctcaaactcnnnnnnncatccaatttctcacaattttcatggctatgcagtctccttcctca 110  Q
    |||| ||||||||||||||  |  |||||||||||||||||||||||       |||||| |||||| | ||||||||||||||||| || |||||||||    
T  18679976 cacataccacaaaaacttaaac--tcatattctgcattctcaaactctttttt-catccagtttctctctattttcatggctatgcaatcaccttcctca 18679880  T
Q  111 tcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctctta 210  Q
    | |||||||||||| ||| ||||||||||||||||||||||||| || ||||||| |||||||||  |||||||||| ||  ||||||||||||||||||    
T  18679879 ttctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactggtcatctctacaaggctctta 18679780  T
Q  211 ttgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttt 310  Q
     |||||| |||||||| |||||||||||||||  ||| || |||||||| |||||||||| ||||||||||  ||| ||||||||||| ||||| || ||    
T  18679779 ctgacaaaggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattgaagagtctaggatctt 18679680  T
Q  311 tattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcg 400  Q
     ||||||||||||||||||||||||||||||||   |||||| |||||||||||||| ||||| ||||| ||||| ||||||||||||||    
T  18679679 cattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagggtcg 18679590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 11 - 400
Target Start/End: Complemental strand, 18731913 - 18731527
Alignment:
Q  11 cacagaccacaaaaacttactcattcatattctgcattctcaaactcnnnnnnncatccaatttctcacaattttcatggctatgcagtctccttcctca 110  Q
    |||| ||||||||||||||  |  |||||||||||||||||||||||       |||||| |||||| | ||||||||||||||||| || |||||||||    
T  18731913 cacataccacaaaaacttaaac--tcatattctgcattctcaaactctttttt-catccagtttctctcgattttcatggctatgcaatcaccttcctca 18731817  T
Q  111 tcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctctta 210  Q
    |||||||||||||| ||| ||||||||||||||||||||||||| || ||||||| |||||||||  |||||||||| ||| |||||||||  |||||||    
T  18731816 tcctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtgacggttttactggccatctctacagagctctta 18731717  T
Q  211 ttgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttt 310  Q
     ||||||||||||||| |||||||||||||||  ||| || |||||||| |||||||||| ||||||||||  ||| ||||||||||| ||||| || ||    
T  18731716 ctgacaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattgaagagtctaggatctt 18731617  T
Q  311 tattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcg 400  Q
     ||||||||||||||||||||||||||||||||   |||||| |||||||||||||| ||||| || || ||||| ||||||||||||||    
T  18731616 cattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcg 18731527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 11 - 406
Target Start/End: Complemental strand, 18655886 - 18655494
Alignment:
Q  11 cacagaccacaaaaacttactcattcatattctgcattctcaaactcnnnnnnncatccaatttctcacaattttcatggctatgcagtctccttcctca 110  Q
    |||| ||||||||||||||  |  |||||||||||||||||||||||       |||||| |||||| ||||||||||||||| ||| || |||||||||    
T  18655886 cacataccacaaaaacttaaac--tcatattctgcattctcaaactctttttt-catccagtttctctcaattttcatggctaggcaatcaccttcctca 18655790  T
Q  111 tcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctctta 210  Q
    |||||||||||||| ||| ||||||||||||||||||||||||| || ||||||| |||||||||  |||||||||| ||  |||||||||| |||||||    
T  18655789 tcctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactgggcatctctacaaagctctta 18655690  T
Q  211 ttgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttt 310  Q
     ||||||||||||||| |||||||||||||||  ||| || ||||| || |||||||||| ||||||||||  ||| |||||| |||| ||||| || ||    
T  18655689 ctgacaagggaatccacaccttcattgatgaccgtgagctgcaaagtggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatctt 18655590  T
Q  311 tattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgt 406  Q
    |||||||||||||||||||||||||||||||||   |||||| |||||||||||||| | ||| ||||| ||||| |||||||||||||| |||||    
T  18655589 tattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccgcatcattcactgctacaagacaaagggtcgtctcgt 18655494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 79 - 400
Target Start/End: Complemental strand, 18724429 - 18724108
Alignment:
Q  79 caattttcatggctatgcagtctccttcctcatcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggta 178  Q
    ||||| ||||||||||||| || ||||||||||||||||||||||| ||| ||||||||||||||||||||||||| || ||||||| |||||||||  |    
T  18724429 caattctcatggctatgcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtaa 18724330  T
Q  179 cggttttacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatca 278  Q
    ||||||||| ||  |||||||||||||||||| ||||||||||||||| |||||||||||||||  ||| || |||||||| |||||||||| |||||||    
T  18724329 cggttttactggtcatctctacaaggctcttactgacaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatca 18724230  T
Q  279 ctcatcaaggccattgaagaatctagaatttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattc 378  Q
    |||  ||| ||||||||||| ||||| || || ||||||||||||||||||||||||||||||||   |||||| ||| |||||||||| ||||| || |    
T  18724229 ctcgacaatgccattgaagagtctaggatcttcattcctgtgttttctatcaactatgcctcttcttcattttgtttgaacgaacttgtccacatcatgc 18724130  T
Q  379 attgctataagacaaagggtcg 400  Q
    | ||||| ||||||||||||||    
T  18724129 actgctacaagacaaagggtcg 18724108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 16 - 247
Target Start/End: Complemental strand, 17989454 - 17989226
Alignment:
Q  16 accacaaaaacttactcattcatattctgcattctcaaactcnnnnnnncatccaatttctcacaattttcatggctatgcagtctccttcctcatcctc 115  Q
    ||||||||||| | ||||||||||||||||||||||||||||       ||||  ||||||| ||||| ||||||| ||||| |  |||| ||  |||||    
T  17989454 accacaaaaacatcctcattcatattctgcattctcaaactcttct---catcttatttctctcaattctcatggccatgcaattacctttctattcctc 17989358  T
Q  116 ttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattgac 215  Q
    ||||||||| |||| ||||| |||| | |||||||||| || || |||||| ||||||||||||||||| || ||||||||||  |||||||||||||||    
T  17989357 ttcattttcctatgcattcagttacgatgtgttcctcatttgtaagggcaccgacactcggtacggtttcaccggcaatctcttgaaggctcttattgac 17989258  T
Q  216 aagggaatccataccttcattgatgacaatga 247  Q
    |||||||| | |||||||  ||||||| ||||    
T  17989257 aagggaattcgtaccttccatgatgacgatga 17989226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 16 - 247
Target Start/End: Original strand, 18073535 - 18073763
Alignment:
Q  16 accacaaaaacttactcattcatattctgcattctcaaactcnnnnnnncatccaatttctcacaattttcatggctatgcagtctccttcctcatcctc 115  Q
    ||||||||||| | ||||||||||||||||||||||||||||       ||||  ||||||| ||||| ||||||| ||||| |  |||| ||  |||||    
T  18073535 accacaaaaacatcctcattcatattctgcattctcaaactcttct---catcttatttctctcaattctcatggccatgcaattacctttctattcctc 18073631  T
Q  116 ttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattgac 215  Q
    ||||||||| |||| ||||| |||| | |||||||||| || || |||||| ||||||||||||||||| || ||||||||||  |||||||||||||||    
T  18073632 ttcattttcctatgcattcagttacgatgtgttcctcatttgtaagggcaccgacactcggtacggtttcaccggcaatctcttgaaggctcttattgac 18073731  T
Q  216 aagggaatccataccttcattgatgacaatga 247  Q
    |||||||| | |||||||  ||||||| ||||    
T  18073732 aagggaattcgtaccttccatgatgacgatga 18073763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 153 - 303
Target Start/End: Complemental strand, 5091237 - 5091087
Alignment:
Q  153 agttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgacaatgatcttc 252  Q
    |||||||| ||||| |||||||| ||||||||||| || ||||||||  | |||||   || ||||||||| || ||||||||||||||||  || ||||    
T  5091237 agttttagaggcaccgacactcgttacggttttactggaaatctctatgaagctctacgtgtcaagggaattcacaccttcattgatgacagagagcttc 5091138  T
Q  253 aaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatcta 303  Q
    |  |||||||  |||| ||||| |||||  ||||||||||| |||||||||    
T  5091137 agcgaggagaccaaataacaccgtcacttctcaaggccattcaagaatcta 5091087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 159; Significance: 2e-84; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 65 - 403
Target Start/End: Complemental strand, 28164720 - 28164382
Alignment:
Q  65 catccaatttctcacaattttcatggctatgcagtctccttcctcatcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggc 164  Q
    ||||||||||||  ||||| |||||||||| |  || | |||||| ||||||||| |||| ||||||||||| |||||||||||||||||||||||||||    
T  28164720 catccaatttctgtcaattctcatggctatacgatcgcattcctcttcctcttcaatttcctatggattcacataccaagtgttcctcagttttaggggc 28164621  T
Q  165 actgacactcggtacggttttacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatg 264  Q
    | |||||||||  ||||||| || ||| ||||||| ||||| |||   ||||||||||| || || |||||||||||   ||||||| | |||||||| |    
T  28164620 agtgacactcgtgacggtttcactggccatctctataaggcccttgacgacaagggaattcacacattcattgatgattgtgatcttgagagaggagaag 28164521  T
Q  265 aaatcacaccatcactcatcaaggccattgaagaatctagaatttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaact 364  Q
    |||||||||| ||| ||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||   |||||| |||||||||||    
T  28164520 aaatcacaccgtcattcatcaaggccattgaaaaatcttgaatttttattcctgtgttatctatcaactatgcctcttcttcattttgtttggacgaact 28164421  T
Q  365 tgttcacattattcattgctataagacaaagggtcgcct 403  Q
    ||| ||||| ||||| ||||| |||||||||||||||||    
T  28164420 tgtccacatcattcactgctacaagacaaagggtcgcct 28164382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 85 - 400
Target Start/End: Complemental strand, 268695 - 268380
Alignment:
Q  85 tcatggctatgcagtctccttcctcatcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttt 184  Q
    ||||||||||||| || |||||||| ||||||||| | || ||||||||  | ||||| || |||||||  || || |||  |||||||||  | |||||    
T  268695 tcatggctatgcaatcaccttcctcttcctcttcaatctcatatggatttgcctaccaggtcttcctcaacttcagaggcggtgacactcgtgagggttt 268596  T
Q  185 tacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatc 284  Q
    ||  ||| |||||||||||||||||| ||||||||||||||| ||||||||||||||   ||| ||||||||||| |||||||||| ||||||||||  |    
T  268595 tattggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagaggggatgaaatcaaaccatcactcgac 268496  T
Q  285 aaggccattgaagaatctagaatttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgct 384  Q
    || ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||   |||||| |||||||||||||| ||||| ||||| ||||    
T  268495 aatgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgct 268396  T
Q  385 ataagacaaagggtcg 400  Q
    | |||| |||||||||    
T  268395 acaagaaaaagggtcg 268380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 111 - 403
Target Start/End: Complemental strand, 28127992 - 28127699
Alignment:
Q  111 tcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctctta 210  Q
    ||||||||| |||| ||||||||||| ||||||||||||||||| || ||||||| |||||||||  ||||||| || ||| ||||||||||||| |||     
T  28127992 tcctcttcaatttcctatggattcacataccaagtgttcctcagcttcaggggcagtgacactcgtgacggtttcactggccatctctacaaggcccttt 28127893  T
Q  211 ttgacaagggaatccataccttcattgatgacaatgatcttcaaagaggag-atgaaatcacaccatcactcatcaaggccattgaagaatctagaattt 309  Q
     ||||||||||||||| || |||||||||||   | ||||| | ||||||| |  |||||||||| |||||  | |||||||||||||||||||||||||    
T  28127892 atgacaagggaatccacacattcattgatgattgtaatcttgagagaggagaaaaaaatcacaccgtcacttttaaaggccattgaagaatctagaattt 28127793  T
Q  310 ttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcct 403  Q
    |||||||||| ||||||| |||||||||||||||   |||||| |||||||||||||| ||||| ||||| ||||| |||||||||||||||||    
T  28127792 ttattcctgtattttctaccaactatgcctcttcttcattttgtttggacgaacttgtgcacatcattcactgctacaagacaaagggtcgcct 28127699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 152; Significance: 2e-80; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 85 - 400
Target Start/End: Complemental strand, 29274121 - 29273806
Alignment:
Q  85 tcatggctatgcagtctccttcctcatcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttt 184  Q
    ||||||||||||| || |||||||| ||||||||| | || ||||||||||||||||| || |||||||  ||||| |||  |||||||||  |||||||    
T  29274121 tcatggctatgcaatcaccttcctcttcctcttcaatctcatatggattcacttaccaggtcttcctcaactttagaggcggtgacactcgtgacggttt 29274022  T
Q  185 tacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatc 284  Q
    ||  ||| ||||||||||| |||||| ||||||||||||||| ||||||||||||||   ||| ||||||||||| |||||||||| | ||||||||  |    
T  29274021 tattggccatctctacaagactcttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagaggggatgaaatcaaatcatcactcgac 29273922  T
Q  285 aaggccattgaagaatctagaatttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgct 384  Q
    || | ||||||||| ||||||||||||||||||||||||||||||||||||||||||||   |||||| |||||||||||||| ||||| ||||| ||||    
T  29273921 aatgtcattgaagagtctagaatttttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgct 29273822  T
Q  385 ataagacaaagggtcg 400  Q
    | ||||||||||||||    
T  29273821 acaagacaaagggtcg 29273806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 125 - 280
Target Start/End: Original strand, 31903727 - 31903882
Alignment:
Q  125 ttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattgacaagggaatc 224  Q
    |||||||||||| ||| | ||||||||||| ||||| |||   |||||||| || |||||||| || ||||||||||| ||||||  ||| |||||||||    
T  31903727 ttatggattcacctacgatgtgttcctcagctttagaggcttagacactcgctatggttttactggaaatctctacaaagctctttatgataagggaatc 31903826  T
Q  225 cataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcact 280  Q
    || ||||| ||||| ||  | || |||||||||||| |||||||||||||||||||    
T  31903827 cacacctttattgacgatgaagaacttcaaagaggacatgaaatcacaccatcact 31903882  T

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Target: scaffold0038 (Bit Score: 99; Significance: 1e-48; HSPs: 4)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 126 - 384
Target Start/End: Original strand, 34602 - 34860
Alignment:
Q  126 tatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattgacaagggaatcc 225  Q
    ||||||||||| ||  | |||||||| |||||||| || | ||||||||| || |||||||| |  |||||||| |  ||||||  | ||||||||||||    
T  34602 tatggattcacctatgacgtgttccttagttttagaggtagtgacactcgctatggttttaccgaaaatctctatagagctctttgtcacaagggaatcc 34701  T
Q  226 ataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattcctgtgttttc 325  Q
    | ||||||||||||||||  || |||||| ||||||||||||| |||||||||||  |||||||||||||||| ||||| ||||| |||||||| || ||    
T  34702 acaccttcattgatgacagggagcttcaaggaggagatgaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcctgtcttgtc 34801  T
Q  326 tatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgct 384  Q
    |||||| ||||| |||||   ||||||||||||||||||||| ||||| ||||| ||||    
T  34802 tatcaattatgcttcttcttcattttgcttggacgaacttgtccacatcattcactgct 34860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 114 - 384
Target Start/End: Original strand, 27313 - 27583
Alignment:
Q  114 tcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattg 213  Q
    ||||| || |||||||||||||| ||  | |||||||| |||||||| || | ||||||||| || |||||||| || ||||||||||  | ||||  |     
T  27313 tcttccttctcttatggattcacctatgacgtgttccttagttttagaggtattgacactcgttatggttttactggaaatctctacagtgatctttgta 27412  T
Q  214 acaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttat 313  Q
    | |||||||| || || ||| ||||||| |  || |||||| |||| |||||||| ||| |||||||  |||||| ||||||||||||||| ||||| ||    
T  27413 agaagggaattcacacattctttgatgatagagagcttcaaggaggtgatgaaataacatcatcacttttcaaggtcattgaagaatctaggattttcat 27512  T
Q  314 tcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgct 384  Q
    |||||| || |||||||| ||||| |||||   ||||||||||||||||||||| ||||| ||||||||||    
T  27513 tcctgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtccacatcattcattgct 27583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 111 - 384
Target Start/End: Original strand, 116658 - 116931
Alignment:
Q  111 tcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctctta 210  Q
    |||||||| ||||| ||||||||||| ||  | |||||||| |||||||| || | ||||||||| || |||||||| || ||||||||||| | ||||     
T  116658 tcctcttccttttcctatggattcacctatgacgtgttccttagttttagaggtagtgacactcgttatggttttactggaaatctctacaaagatcttt 116757  T
Q  211 ttgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttt 310  Q
     |   ||| |||| | |||||||||||||||||| || |||||| |||| || ||||| ||||| |||||  |||||||||||||||| ||||| |||||    
T  116758 gtaggaagagaattcgtaccttcattgatgacaaagaccttcaacgaggtgacgaaataacaccgtcacttttcaaggccattgaagagtctaggatttt 116857  T
Q  311 tattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgct 384  Q
     |||||| | || |||||||| ||||| |||||    ||||||||||| |||||||| ||||||||||| ||||    
T  116858 cattcctattttgtctatcaattatgcttcttcttccttttgcttggatgaacttgtccacattattcactgct 116931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #4
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 147 - 384
Target Start/End: Original strand, 42864 - 43101
Alignment:
Q  147 ttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgacaatg 246  Q
    ||||| |||||||| || | ||||||||| || |||||||| || ||||||||||| | ||||  | | |||||||| |  ||||||||||||||||  |    
T  42864 ttccttagttttagaggtagtgacactcgttatggttttactggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagag 42963  T
Q  247 atcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattcctgtgttttctatcaactatgcctcttcaaa 346  Q
    | |||| | |||| ||  |||| |||||||||||  |||||||||||||||| ||||| ||||| |||||||| || |||||||| ||||| |||||       
T  42964 aacttccaggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcctgtcttgtctatcaattatgcttcttcttc 43063  T
Q  347 attttgcttggacgaacttgttcacattattcattgct 384  Q
    ||||||||||||||||||||| ||||| ||||| ||||    
T  43064 attttgcttggacgaacttgtccacatcattcactgct 43101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 86; Significance: 6e-41; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 111 - 384
Target Start/End: Complemental strand, 58607 - 58334
Alignment:
Q  111 tcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctctta 210  Q
    |||||||| || || ||||||||||| || || |||||||| || ||||| ||   ||||||||| || |||||||| || ||||||||||  ||||||     
T  58607 tcctcttccttctcctatggattcacctatcacgtgttccttagctttagaggttgtgacactcgctatggttttactggaaatctctacagagctcttt 58508  T
Q  211 ttgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttt 310  Q
     ||||||||||||||  |||||||| |||||||  || |||||| |||| || ||||| |||||||||||  ||||||||||| |||| ||||| |||||    
T  58507 gtgacaagggaatccgaaccttcatggatgacagagagcttcaaggaggtgacgaaataacaccatcacttttcaaggccattaaagagtctaggatttt 58408  T
Q  311 tattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgct 384  Q
     ||||| || || |||||||||||||| |||||   |||||||||| |||||||||| ||||| ||||| ||||    
T  58407 cattcccgtcttgtctatcaactatgcttcttcttcattttgcttgaacgaacttgtccacatcattcactgct 58334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 16 - 247
Target Start/End: Original strand, 59343 - 59571
Alignment:
Q  16 accacaaaaacttactcattcatattctgcattctcaaactcnnnnnnncatccaatttctcacaattttcatggctatgcagtctccttcctcatcctc 115  Q
    ||||||||||| | ||||||||||||||||||||||||||||       ||||  ||||||| ||||| ||||||| ||||| |  |||| ||  |||||    
T  59343 accacaaaaacatcctcattcatattctgcattctcaaactcttct---catcttatttctctcaattctcatggccatgcaattacctttctattcctc 59439  T
Q  116 ttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattgac 215  Q
    ||||||||| |||| ||||| |||| | |||||||||| || || |||||| ||||||||||||||||| || ||||||||||  |||||||||||||||    
T  59440 ttcattttcctatgcattcagttacgatgtgttcctcatttgtaagggcaccgacactcggtacggtttcaccggcaatctcttgaaggctcttattgac 59539  T
Q  216 aagggaatccataccttcattgatgacaatga 247  Q
    |||||||| | |||||||  ||||||| ||||    
T  59540 aagggaattcgtaccttccatgatgacgatga 59571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 2e-31; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 123 - 384
Target Start/End: Original strand, 3279562 - 3279823
Alignment:
Q  123 tcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattgacaagggaa 222  Q
    |||||||||||||| ||  | || ||| | ||||||||||||||||||||||| || |||||||| || |||||||| |  ||| | | ||||   |||     
T  3279562 tcttatggattcacctatgacgtattcttgagttttaggggcactgacactcgctatggttttactggaaatctctatagagctttaagtgacggtggat 3279661  T
Q  223 tccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattcctgtgtt 322  Q
    ||   |||||||||||||| |  || |||||  |||| ||||||||||||| ||||||  |||||||||| ||||| || |  ||||||||||| || ||    
T  3279662 tctgcaccttcattgatgatagggagcttcatggaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggtctt 3279761  T
Q  323 ttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgct 384  Q
     |||||||||||||| ||||| | |||||| |||||||||||||| ||||| ||||||||||    
T  3279762 ctctatcaactatgcttcttctatattttgtttggacgaacttgtccacatcattcattgct 3279823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 87 - 308
Target Start/End: Complemental strand, 17994033 - 17993812
Alignment:
Q  87 atggctatgcagtctccttcctcatcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggtttta 186  Q
    ||||||||||| || |||||||| || || || || |||||||| ||||  | | | |||||| | ||||| ||||| || || ||||| || ||||| |    
T  17994033 atggctatgcaatcaccttcctcctcttcctccttatcttatggtttcagcttcgatgtgttcattagtttcaggggtaccgatactcgatatggtttca 17993934  T
Q  187 cgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaa 286  Q
    | || |||||||| || ||||||  |||||||||||| |  |||||||| |||||||| || ||||| ||||| |||||||||||||| || ||| ||||    
T  17993933 ccggtaatctctataaagctctttctgacaagggaattcgaaccttcatcgatgacaaagagcttcagagaggtgatgaaatcacaccgtcgctcctcaa 17993834  T
Q  287 ggccattgaagaatctagaatt 308  Q
    |  ||||||||| || ||||||    
T  17993833 gagcattgaagactcaagaatt 17993812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 182 - 298
Target Start/End: Original strand, 16688944 - 16689060
Alignment:
Q  182 ttttacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactc 281  Q
    |||||| || ||||| ||||| |||||   |||||||||||||| |  ||||||||||||||| || ||||| ||||| ||  ||||||||||||||||     
T  16688944 ttttactggtaatctgtacaaagctctatgtgacaagggaatccgtgtcttcattgatgacaaggaacttcagagaggtgacaaaatcacaccatcactt 16689043  T
Q  282 atcaaggccattgaaga 298  Q
    |||||||| ||||||||    
T  16689044 atcaaggcaattgaaga 16689060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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