View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2341_high_9 (Length: 233)
Name: NF2341_high_9
Description: NF2341
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2341_high_9 |
 | |
|
| [»] scaffold0006 (6 HSPs) |
| | |
|
| [»] scaffold0012 (1 HSPs) |
| | |
|
| [»] scaffold0069 (2 HSPs) |
| | |
|
| [»] scaffold0460 (2 HSPs) |
| | |
|
| [»] scaffold0068 (1 HSPs) |
| | |
|
Alignment Details
Target: scaffold0006 (Bit Score: 158; Significance: 3e-84; HSPs: 6)
Name: scaffold0006
Description:
Target: scaffold0006; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 18 - 219
Target Start/End: Complemental strand, 175076 - 174875
Alignment:
| Q |
18 |
aatcccacagttacttattcgaagactttgaagttgtttcatatctctagctactgagagtggaaagaggcttaacaagcttttgcattccacaacagat |
117 |
Q |
| |
|
||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||| |||||||||||| ||| |||||||| |
|
|
| T |
175076 |
aatcccacagttacttacaagaagactttgaagttgcatcatatctctagccactgagagtggaaagaggcttatcaagcttttgcaatccgcaacagat |
174977 |
T |
|
| Q |
118 |
acatcacttaaattttgaaacctcatagtgtaatgtggatcctctttccatacatgcttcagttttggaagattggatagttctaatttcttcaattgag |
217 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
174976 |
acaacacttaaattttgaaacctcatagtgtaatgtggatcctctttccatacatgcttcagttttggaagattggatagttttaatttcttcaattgag |
174877 |
T |
|
| Q |
218 |
ta |
219 |
Q |
| |
|
|| |
|
|
| T |
174876 |
ta |
174875 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0006; HSP #2
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 18 - 219
Target Start/End: Complemental strand, 190484 - 190283
Alignment:
| Q |
18 |
aatcccacagttacttattcgaagactttgaagttgtttcatatctctagctactgagagtggaaagaggcttaacaagcttttgcattccacaacagat |
117 |
Q |
| |
|
||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||| |||||||||||| ||| |||||||| |
|
|
| T |
190484 |
aatcccacagttacttacaagaagactttgaagttgcatcatatctctagccactgagagtggaaagaggcttatcaagcttttgcaatccgcaacagat |
190385 |
T |
|
| Q |
118 |
acatcacttaaattttgaaacctcatagtgtaatgtggatcctctttccatacatgcttcagttttggaagattggatagttctaatttcttcaattgag |
217 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
190384 |
acaacacttaaattttgaaacctcatagtgtaatgtggatcctctttccatacatgcttcagttttggaagattggatagttttaatttcttcaattgag |
190285 |
T |
|
| Q |
218 |
ta |
219 |
Q |
| |
|
|| |
|
|
| T |
190284 |
ta |
190283 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0006; HSP #3
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 18 - 219
Target Start/End: Complemental strand, 210808 - 210607
Alignment:
| Q |
18 |
aatcccacagttacttattcgaagactttgaagttgtttcatatctctagctactgagagtggaaagaggcttaacaagcttttgcattccacaacagat |
117 |
Q |
| |
|
||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||| |||||||||||||| |||||| |||||| ||||||||||| |
|
|
| T |
210808 |
aatcccacagttacttacatgaagactttgaagttgcatcatatctctagccactgagaatggaaagaggcttatcaagctattgcatcccacaacagat |
210709 |
T |
|
| Q |
118 |
acatcacttaaattttgaaacctcatagtgtaatgtggatcctctttccatacatgcttcagttttggaagattggatagttctaatttcttcaattgag |
217 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
210708 |
acatcacttaaattttgaaacctcatagtgtaatgtggatcctctttccatacatgcttcagttttggaagattgaatagttctaatttcttcaattgag |
210609 |
T |
|
| Q |
218 |
ta |
219 |
Q |
| |
|
|| |
|
|
| T |
210608 |
ta |
210607 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0006; HSP #4
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 18 - 209
Target Start/End: Complemental strand, 113903 - 113712
Alignment:
| Q |
18 |
aatcccacagttacttattcgaagactttgaagttgtttcatatctctagctactgagagtggaaagaggcttaacaagcttttgcattccacaacagat |
117 |
Q |
| |
|
||||||||| ||| ||| | |||||||||||||||| ||| ||||||||||||||| |||||||||||||||| |||||| |||||| ||||||| ||| |
|
|
| T |
113903 |
aatcccacatttaattacttgaagactttgaagttgcatcaaatctctagctactgaaagtggaaagaggcttatcaagctattgcatcccacaacggat |
113804 |
T |
|
| Q |
118 |
acatcacttaaattttgaaacctcatagtgtaatgtggatcctctttccatacatgcttcagttttggaagattggatagttctaatttctt |
209 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| |||||||||||||||| ||||||| ||||||||| |
|
|
| T |
113803 |
acatcacttaaattttgaaacctcatagtgttatgtggatcctccttccatacatgcctcagttttggaagattagatagttttaatttctt |
113712 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0006; HSP #5
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 106 - 219
Target Start/End: Complemental strand, 118590 - 118477
Alignment:
| Q |
106 |
tccacaacagatacatcacttaaattttgaaacctcatagtgtaatgtggatcctctttccatacatgcttcagttttggaagattggatagttctaatt |
205 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| ||||| |
|
|
| T |
118590 |
tccacaacagatacatcacttaaattttcaaacctcatagtgtaatgtggatcctctttccatacatgtttcagttttggaagattgaatagttttaatt |
118491 |
T |
|
| Q |
206 |
tcttcaattgagta |
219 |
Q |
| |
|
| |||||||||||| |
|
|
| T |
118490 |
ttttcaattgagta |
118477 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0006; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 158 - 219
Target Start/End: Complemental strand, 142838 - 142777
Alignment:
| Q |
158 |
cctctttccatacatgcttcagttttggaagattggatagttctaatttcttcaattgagta |
219 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||| || || |||||||||||||||| |
|
|
| T |
142838 |
cctctttccatacatgcttcagttttggaagattagatatttttagtttcttcaattgagta |
142777 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 158; Significance: 3e-84; HSPs: 13)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 18 - 219
Target Start/End: Complemental strand, 13677494 - 13677293
Alignment:
| Q |
18 |
aatcccacagttacttattcgaagactttgaagttgtttcatatctctagctactgagagtggaaagaggcttaacaagcttttgcattccacaacagat |
117 |
Q |
| |
|
||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||| |||||||||||| ||| |||||||| |
|
|
| T |
13677494 |
aatcccacagttacttacaagaagactttgaagttgcatcatatctctagccactgagagtggaaagaggcttatcaagcttttgcaatccgcaacagat |
13677395 |
T |
|
| Q |
118 |
acatcacttaaattttgaaacctcatagtgtaatgtggatcctctttccatacatgcttcagttttggaagattggatagttctaatttcttcaattgag |
217 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
13677394 |
acaacacttaaattttgaaacctcatagtgtaatgtggatcctctttccatacatgcttcagttttggaagattggatagttttaatttcttcaattgag |
13677295 |
T |
|
| Q |
218 |
ta |
219 |
Q |
| |
|
|| |
|
|
| T |
13677294 |
ta |
13677293 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 18 - 219
Target Start/End: Complemental strand, 13596333 - 13596132
Alignment:
| Q |
18 |
aatcccacagttacttattcgaagactttgaagttgtttcatatctctagctactgagagtggaaagaggcttaacaagcttttgcattccacaacagat |
117 |
Q |
| |
|
||||||||||||||||| | |||||||||||||||| ||||||||||||| |||||||| ||||||||||||| |||||| | |||| ||||||||||| |
|
|
| T |
13596333 |
aatcccacagttacttacttgaagactttgaagttgcatcatatctctagccactgagagcggaaagaggcttatcaagctatggcatcccacaacagat |
13596234 |
T |
|
| Q |
118 |
acatcacttaaattttgaaacctcatagtgtaatgtggatcctctttccatacatgcttcagttttggaagattggatagttctaatttcttcaattgag |
217 |
Q |
| |
|
|||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |
|
|
| T |
13596233 |
acatcacttaaattttcaaacttcatagtgtaatgtggatcctttttccatacatgcttcagttttggaagattagatagttttaatttcttcaattgag |
13596134 |
T |
|
| Q |
218 |
ta |
219 |
Q |
| |
|
|| |
|
|
| T |
13596133 |
ta |
13596132 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 18 - 219
Target Start/End: Complemental strand, 13552598 - 13552397
Alignment:
| Q |
18 |
aatcccacagttacttattcgaagactttgaagttgtttcatatctctagctactgagagtggaaagaggcttaacaagcttttgcattccacaacagat |
117 |
Q |
| |
|
||||||||| | ||||| | |||||||||||||||| ||||||||||||| |||||||| ||||||||||||| |||||| |||||| ||||||||||| |
|
|
| T |
13552598 |
aatcccacactgacttacttgaagactttgaagttgcatcatatctctagccactgagagcggaaagaggcttatcaagctattgcatcccacaacagat |
13552499 |
T |
|
| Q |
118 |
acatcacttaaattttgaaacctcatagtgtaatgtggatcctctttccatacatgcttcagttttggaagattggatagttctaatttcttcaattgag |
217 |
Q |
| |
|
|||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |
|
|
| T |
13552498 |
acatcacttaaattttcaaacttcatagtgtaatgtggatcctttttccatacatgcttcagttttggaagattagatagttttaatttcttcaattgag |
13552399 |
T |
|
| Q |
218 |
ta |
219 |
Q |
| |
|
|| |
|
|
| T |
13552398 |
ta |
13552397 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 18 - 223
Target Start/End: Original strand, 15896024 - 15896229
Alignment:
| Q |
18 |
aatcccacagttacttattcgaagactttgaagttgtttcatatctctagctactgagagtggaaagaggcttaacaagcttttgcattccacaacagat |
117 |
Q |
| |
|
|||| |||| ||||||| |||||||||||||||||| ||||||||||| | |||||||||||||||||||||| |||||||| ||||||||||||||| |
|
|
| T |
15896024 |
aatctcacacttacttactcgaagactttgaagttgcatcatatctctacccactgagagtggaaagaggcttatcaagctttcacattccacaacagat |
15896123 |
T |
|
| Q |
118 |
acatcacttaaattttgaaacctcatagtgtaatgtggatcctctttccatacatgcttcagttttggaagattggatagttctaatttcttcaattgag |
217 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||| ||||||| |||||||||||||||| |
|
|
| T |
15896124 |
acatagcttaaattttgaaacctcatagtgtaatgtgggtcctccttccatacatgtttcagttttggaagattagatagttttaatttcttcaattgac |
15896223 |
T |
|
| Q |
218 |
tataat |
223 |
Q |
| |
|
|||||| |
|
|
| T |
15896224 |
tataat |
15896229 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 22 - 217
Target Start/End: Complemental strand, 13517118 - 13516923
Alignment:
| Q |
22 |
ccacagttacttattcgaagactttgaagttgtttcatatctctagctactgagagtggaaagaggcttaacaagcttttgcattccacaacagatacat |
121 |
Q |
| |
|
||||| ||||||| |||||||||||||||||| |||| || || | |||||||||||||||||| ||| |||| |||||||| |||| |||||||||| |
|
|
| T |
13517118 |
ccacatttacttactcgaagactttgaagttgcaacatacctttaaccactgagagtggaaagaggtttatcaagtttttgcatcccaccacagatacat |
13517019 |
T |
|
| Q |
122 |
cacttaaattttgaaacctcatagtgtaatgtggatcctctttccatacatgcttcagttttggaagattggatagttctaatttcttcaattgag |
217 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||| |
|
|
| T |
13517018 |
cacttaaattttgaaaccgcatagtgtaatgtggatcctctttccatacatgcttcagttttggaagattagatagttttaatttcttcagttgag |
13516923 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 18 - 216
Target Start/End: Complemental strand, 20377786 - 20377588
Alignment:
| Q |
18 |
aatcccacagttacttattcgaagactttgaagttgtttcatatctctagctactgagagtggaaagaggcttaacaagcttttgcattccacaacagat |
117 |
Q |
| |
|
||||||||| ||| ||| | ||||| |||||||||| ||| ||||||||||||||| |||||||||||||||| |||||| |||||| ||||||| ||| |
|
|
| T |
20377786 |
aatcccacatttaattacttgaagattttgaagttgcatcacatctctagctactgaaagtggaaagaggcttatcaagctattgcatcccacaacggat |
20377687 |
T |
|
| Q |
118 |
acatcacttaaattttgaaacctcatagtgtaatgtggatcctctttccatacatgcttcagttttggaagattggatagttctaatttcttcaattga |
216 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| |||||||||||||||| ||||||| ||||||||||| |||| |
|
|
| T |
20377686 |
acatcacttaaattttgaaacctcatagtgttatgtggatcctccttccatacatgcctcagttttggaagattagatagttttaatttcttcagttga |
20377588 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 18 - 211
Target Start/End: Original strand, 20510801 - 20510994
Alignment:
| Q |
18 |
aatcccacagttacttattcgaagactttgaagttgtttcatatctctagctactgagagtggaaagaggcttaacaagcttttgcattccacaacagat |
117 |
Q |
| |
|
||||||||| ||| ||| | |||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||| |||||| ||||||| || |
|
|
| T |
20510801 |
aatcccacatttaattacttgaagactttgaagttgcatcatatctctagctactgaaagtggaaagaggcttatcaagctattgcataccacaacgtat |
20510900 |
T |
|
| Q |
118 |
acatcacttaaattttgaaacctcatagtgtaatgtggatcctctttccatacatgcttcagttttggaagattggatagttctaatttcttca |
211 |
Q |
| |
|
|||||||||||||||||||||| |||||||| |||||||||||| |||||||||||| |||||||||||||||| ||||||| ||||||||||| |
|
|
| T |
20510901 |
acatcacttaaattttgaaaccccatagtgttatgtggatcctccttccatacatgcctcagttttggaagattagatagttttaatttcttca |
20510994 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 18 - 216
Target Start/End: Original strand, 16454042 - 16454240
Alignment:
| Q |
18 |
aatcccacagttacttattcgaagactttgaagttgtttcatatctctagctactgagagtggaaagaggcttaacaagcttttgcattccacaacagat |
117 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||| |||||||||||||||||| ||| ||||||| || | ||| ||| |||||||| |||| || |
|
|
| T |
16454042 |
aatcccacagttacttactcgaagactttgaagttgcatcatatctctagctactgtgagcggaaagatactaatcaaacttgtgcattcctcaactgac |
16454141 |
T |
|
| Q |
118 |
acatcacttaaattttgaaacctcatagtgtaatgtggatcctctttccatacatgcttcagttttggaagattggatagttctaatttcttcaattga |
216 |
Q |
| |
|
|| |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| ||| ||||||| || ||||||||||||| |
|
|
| T |
16454142 |
acttcacttaaattttgaaacctcatagtgtcatgtggatcctccttccatacatgcttcagttttggaacattagatagttttagtttcttcaattga |
16454240 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 18 - 216
Target Start/End: Original strand, 16463199 - 16463397
Alignment:
| Q |
18 |
aatcccacagttacttattcgaagactttgaagttgtttcatatctctagctactgagagtggaaagaggcttaacaagcttttgcattccacaacagat |
117 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||| |||||||||||||||||| ||| ||||||| || | ||| ||| |||||||| |||| || |
|
|
| T |
16463199 |
aatcccacagttacttactcgaagactttgaagttgcatcatatctctagctactgtgagcggaaagatactaatcaaacttgtgcattcctcaactgac |
16463298 |
T |
|
| Q |
118 |
acatcacttaaattttgaaacctcatagtgtaatgtggatcctctttccatacatgcttcagttttggaagattggatagttctaatttcttcaattga |
216 |
Q |
| |
|
|| |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| ||| ||||||| || ||||||||||||| |
|
|
| T |
16463299 |
acttcacttaaattttgaaacctcatagtgtcatgtggatcctccttccatacatgcttcagttttggaacattagatagttttagtttcttcaattga |
16463397 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 39 - 216
Target Start/End: Complemental strand, 20486282 - 20486105
Alignment:
| Q |
39 |
aagactttgaagttgtttcatatctctagctactgagagtggaaagaggcttaacaagcttttgcattccacaacagatacatcacttaaattttgaaac |
138 |
Q |
| |
|
||||||||||||||| ||||||||||||| |||||||| |||||||||||| |||||||| |||||| ||||||||| |||| ||||||||| |||| |
|
|
| T |
20486282 |
aagactttgaagttgcatcatatctctagccactgagagcggaaagaggcttgtcaagctttcacattcctcaacagatatatcaattaaattttcaaac |
20486183 |
T |
|
| Q |
139 |
ctcatagtgtaatgtggatcctctttccatacatgcttcagttttggaagattggatagttctaatttcttcaattga |
216 |
Q |
| |
|
|| ||||||||||||||||| || ||||||||||||||||| ||||||||||| ||||||| |||||||||||||||| |
|
|
| T |
20486182 |
ctaatagtgtaatgtggatcatccttccatacatgcttcagatttggaagattagatagttttaatttcttcaattga |
20486105 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 22 - 186
Target Start/End: Original strand, 19189469 - 19189633
Alignment:
| Q |
22 |
ccacagttacttattcgaagactttgaagttgtttcatatctctagctactgagagtggaaagaggcttaacaagcttttgcattccacaacagatacat |
121 |
Q |
| |
|
||||| ||||||| |||||||||||||||||| |||| || |||| |||||||||||||||||| ||| |||| ||| |||||| |||||||||||| |
|
|
| T |
19189469 |
ccacatttacttactcgaagactttgaagttgcaacatacctttagccactgagagtggaaagaggtttatcaagttttcacattcctcaacagatacat |
19189568 |
T |
|
| Q |
122 |
cacttaaattttgaaacctcatagtgtaatgtggatcctctttccatacatgcttcagttttgga |
186 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||| |
|
|
| T |
19189569 |
cacttaaattttgaaacctcatagtgttatgtggatcctccttccatacatgcctcagttttgga |
19189633 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 45 - 216
Target Start/End: Original strand, 16492157 - 16492328
Alignment:
| Q |
45 |
ttgaagttgtttcatatctctagctactgagagtggaaagaggcttaacaagcttttgcattccacaacagatacatcacttaaattttgaaacctcata |
144 |
Q |
| |
|
||||||| || ||||||||| ||||||||| | |||||| ||||| ||||||| || ||||| |||| ||||| ||| ||||||||||||||||||| |
|
|
| T |
16492157 |
ttgaagtagtatcatatctcgtgctactgagtgcggaaagttgcttatcaagcttctgtattcctcaaccgatacttcatttaaattttgaaacctcatt |
16492256 |
T |
|
| Q |
145 |
gtgtaatgtggatcctctttccatacatgcttcagttttggaagattggatagttctaatttcttcaattga |
216 |
Q |
| |
|
||| |||||||| || ||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |
|
|
| T |
16492257 |
gtgctatgtggattttccttccatacatgcttcagttttggaagattagatagttttaatttcttcaattga |
16492328 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 158 - 219
Target Start/End: Complemental strand, 13653077 - 13653016
Alignment:
| Q |
158 |
cctctttccatacatgcttcagttttggaagattggatagttctaatttcttcaattgagta |
219 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||| || || |||||||||||||||| |
|
|
| T |
13653077 |
cctctttccatacatgcttcagttttggaagattagatatttttagtttcttcaattgagta |
13653016 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0012 (Bit Score: 154; Significance: 8e-82; HSPs: 1)
Name: scaffold0012
Description:
Target: scaffold0012; HSP #1
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 18 - 219
Target Start/End: Complemental strand, 120674 - 120473
Alignment:
| Q |
18 |
aatcccacagttacttattcgaagactttgaagttgtttcatatctctagctactgagagtggaaagaggcttaacaagcttttgcattccacaacagat |
117 |
Q |
| |
|
||||||||||||||||| |||| ||||||||||| ||||||||||||| |||||||||||||||||||||| |||||||| ||||||||||||||| |
|
|
| T |
120674 |
aatcccacagttacttacatgaagtctttgaagttgcatcatatctctagcaactgagagtggaaagaggcttatcaagctttcacattccacaacagat |
120575 |
T |
|
| Q |
118 |
acatcacttaaattttgaaacctcatagtgtaatgtggatcctctttccatacatgcttcagttttggaagattggatagttctaatttcttcaattgag |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| |
|
|
| T |
120574 |
acatcacttaaattttgaaacctcatagtgtaatgtggatcctctttccatacatgcttcagttttggtagattgaatagttctaatttcttcaattgag |
120475 |
T |
|
| Q |
218 |
ta |
219 |
Q |
| |
|
|| |
|
|
| T |
120474 |
ta |
120473 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 150; Significance: 2e-79; HSPs: 8)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 18 - 219
Target Start/End: Original strand, 20849833 - 20850034
Alignment:
| Q |
18 |
aatcccacagttacttattcgaagactttgaagttgtttcatatctctagctactgagagtggaaagaggcttaacaagcttttgcattccacaacagat |
117 |
Q |
| |
|
|||||||||| ||| || | |||||||||||||||| ||||||||||||| ||||||| |||||||||||||| |||||||||||| |||||||||||| |
|
|
| T |
20849833 |
aatcccacagctacgtactggaagactttgaagttgcatcatatctctagccactgagaatggaaagaggcttatcaagcttttgcaatccacaacagat |
20849932 |
T |
|
| Q |
118 |
acatcacttaaattttgaaacctcatagtgtaatgtggatcctctttccatacatgcttcagttttggaagattggatagttctaatttcttcaattgag |
217 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
20849933 |
acatcacttaaattttcaaacctcatagtgtaatatggatcctctttccatacatgcttcagttttggaagattggatagttttaatttcttcaattgag |
20850032 |
T |
|
| Q |
218 |
ta |
219 |
Q |
| |
|
|| |
|
|
| T |
20850033 |
ta |
20850034 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 18 - 219
Target Start/End: Original strand, 20806059 - 20806260
Alignment:
| Q |
18 |
aatcccacagttacttattcgaagactttgaagttgtttcatatctctagctactgagagtggaaagaggcttaacaagcttttgcattccacaacagat |
117 |
Q |
| |
|
||||||||| ||||||| | |||||||||||||||| ||||||||||||| |||||||| ||||||||||||| |||||| |||||| ||||||||||| |
|
|
| T |
20806059 |
aatcccacacttacttacttgaagactttgaagttgcatcatatctctagccactgagagcggaaagaggcttatcaagctattgcatcccacaacagat |
20806158 |
T |
|
| Q |
118 |
acatcacttaaattttgaaacctcatagtgtaatgtggatcctctttccatacatgcttcagttttggaagattggatagttctaatttcttcaattgag |
217 |
Q |
| |
|
|||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |
|
|
| T |
20806159 |
acatcacttaaattttcaaacttcatagtgtaatgtggatcctttttccatacatgcttcagttttggaagattagatagttttaatttcttcaattgag |
20806258 |
T |
|
| Q |
218 |
ta |
219 |
Q |
| |
|
|| |
|
|
| T |
20806259 |
ta |
20806260 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 18 - 219
Target Start/End: Original strand, 20841739 - 20841940
Alignment:
| Q |
18 |
aatcccacagttacttattcgaagactttgaagttgtttcatatctctagctactgagagtggaaagaggcttaacaagcttttgcattccacaacagat |
117 |
Q |
| |
|
|||||||||| ||| || | |||||||||||||||| ||||||||||||| ||||||| |||||||||||||| |||||||||||| |||||||||||| |
|
|
| T |
20841739 |
aatcccacagctacgtactggaagactttgaagttgcatcatatctctagccactgagaatggaaagaggcttatcaagcttttgcaatccacaacagat |
20841838 |
T |
|
| Q |
118 |
acatcacttaaattttgaaacctcatagtgtaatgtggatcctctttccatacatgcttcagttttggaagattggatagttctaatttcttcaattgag |
217 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| |||||| |||||||||| |
|
|
| T |
20841839 |
acatcacttaaattttcaaacctcatagtgtaatgtggatcctctttccatacatgtttcagttttggaagattgaatagttttaattttttcaattgag |
20841938 |
T |
|
| Q |
218 |
ta |
219 |
Q |
| |
|
|| |
|
|
| T |
20841939 |
ta |
20841940 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 18 - 219
Target Start/End: Original strand, 20769182 - 20769383
Alignment:
| Q |
18 |
aatcccacagttacttattcgaagactttgaagttgtttcatatctctagctactgagagtggaaagaggcttaacaagcttttgcattccacaacagat |
117 |
Q |
| |
|
||||||||| ||||| | ||||||||||||||| || |||||||||||||| || ||||||||||||||||||| |||||||| ||| ||| ||||||| |
|
|
| T |
20769182 |
aatcccacatttactaactcgaagactttgaagctgcttcatatctctagccacagagagtggaaagaggcttatcaagctttcgcaatccccaacagac |
20769281 |
T |
|
| Q |
118 |
acatcacttaaattttgaaacctcatagtgtaatgtggatcctctttccatacatgcttcagttttggaagattggatagttctaatttcttcaattgag |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |
|
|
| T |
20769282 |
acatcacttaaattttgaaacctcatagtgtaatgtggatccaccttccatacatgcttcagttttggaagattagatagttttaatttcttcaattgag |
20769381 |
T |
|
| Q |
218 |
ta |
219 |
Q |
| |
|
|| |
|
|
| T |
20769382 |
ta |
20769383 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 18 - 219
Target Start/End: Original strand, 20778976 - 20779177
Alignment:
| Q |
18 |
aatcccacagttacttattcgaagactttgaagttgtttcatatctctagctactgagagtggaaagaggcttaacaagcttttgcattccacaacagat |
117 |
Q |
| |
|
||||||||| ||||| | ||||||||||||||| || |||||||||||||| || ||||||||||||||||||| |||||||| ||| ||| ||||||| |
|
|
| T |
20778976 |
aatcccacatttactaactcgaagactttgaagctgcttcatatctctagccacagagagtggaaagaggcttatcaagctttcgcaatccccaacagac |
20779075 |
T |
|
| Q |
118 |
acatcacttaaattttgaaacctcatagtgtaatgtggatcctctttccatacatgcttcagttttggaagattggatagttctaatttcttcaattgag |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |
|
|
| T |
20779076 |
acatcacttaaattttgaaacctcatagtgtaatgtggatccaccttccatacatgcttcagttttggaagattagatagttttaatttcttcaattgag |
20779175 |
T |
|
| Q |
218 |
ta |
219 |
Q |
| |
|
|| |
|
|
| T |
20779176 |
ta |
20779177 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 18 - 216
Target Start/End: Original strand, 20834971 - 20835169
Alignment:
| Q |
18 |
aatcccacagttacttattcgaagactttgaagttgtttcatatctctagctactgagagtggaaagaggcttaacaagcttttgcattccacaacagat |
117 |
Q |
| |
|
||||||||| ||| ||| | |||||||||||||||| ||||||||||||||||||| |||||||||| ||||| |||||| |||||| ||||||| ||| |
|
|
| T |
20834971 |
aatcccacatttaattactagaagactttgaagttgcatcatatctctagctactgaaagtggaaagaagcttatcaagctattgcatcccacaacggat |
20835070 |
T |
|
| Q |
118 |
acatcacttaaattttgaaacctcatagtgtaatgtggatcctctttccatacatgcttcagttttggaagattggatagttctaatttcttcaattga |
216 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| |||||||||||||||| ||||||| ||||||||||| |||| |
|
|
| T |
20835071 |
acatcacttaaattttgaaacctcatagtgttatgtggatcctccttccatacatgcctcagttttggaagattagatagttttaatttcttcagttga |
20835169 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 28 - 217
Target Start/End: Original strand, 20772141 - 20772330
Alignment:
| Q |
28 |
ttacttattcgaagactttgaagttgtttcatatctctagctactgagagtggaaagaggcttaacaagcttttgcattccacaacagatacatcactta |
127 |
Q |
| |
|
||||||| |||||||||||||||||| |||| || |||| |||||||||||||||| | ||| |||| |||||||| |||| |||||||||||||||| |
|
|
| T |
20772141 |
ttacttactcgaagactttgaagttgcaacatacctttagccactgagagtggaaagatgtttatcaagtttttgcatcccaccacagatacatcactta |
20772240 |
T |
|
| Q |
128 |
aattttgaaacctcatagtgtaatgtggatcctctttccatacatgcttcagttttggaagattggatagttctaatttcttcaattgag |
217 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || ||||||||||| ||||| |
|
|
| T |
20772241 |
aattttgaaaccgcatagtgtaatgtggatcctctttccatacatgcttcagttttggaagattagataattttaatttcttcagttgag |
20772330 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 28 - 217
Target Start/End: Original strand, 20781935 - 20782124
Alignment:
| Q |
28 |
ttacttattcgaagactttgaagttgtttcatatctctagctactgagagtggaaagaggcttaacaagcttttgcattccacaacagatacatcactta |
127 |
Q |
| |
|
||||||| |||||||||||||||||| |||| || |||| |||||||||||||||| | ||| |||| |||||||| |||| |||||||||||||||| |
|
|
| T |
20781935 |
ttacttactcgaagactttgaagttgcaacatacctttagccactgagagtggaaagatgtttatcaagtttttgcatcccaccacagatacatcactta |
20782034 |
T |
|
| Q |
128 |
aattttgaaacctcatagtgtaatgtggatcctctttccatacatgcttcagttttggaagattggatagttctaatttcttcaattgag |
217 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || ||||||||||| ||||| |
|
|
| T |
20782035 |
aattttgaaaccgcatagtgtaatgtggatcctctttccatacatgcttcagttttggaagattagataattttaatttcttcagttgag |
20782124 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 142; Significance: 1e-74; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 18 - 219
Target Start/End: Complemental strand, 21816988 - 21816787
Alignment:
| Q |
18 |
aatcccacagttacttattcgaagactttgaagttgtttcatatctctagctactgagagtggaaagaggcttaacaagcttttgcattccacaacagat |
117 |
Q |
| |
|
||||||||| ||||||| | |||||||||||||||| |||||||||||||| |||||||||||||||||||| | ||||||||||||| |||||||||| |
|
|
| T |
21816988 |
aatcccacatttacttacttgaagactttgaagttgcttcatatctctagcaactgagagtggaaagaggctcatcaagcttttgcatcccacaacagaa |
21816889 |
T |
|
| Q |
118 |
acatcacttaaattttgaaacctcatagtgtaatgtggatcctctttccatacatgcttcagttttggaagattggatagttctaatttcttcaattgag |
217 |
Q |
| |
|
|||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||| |
|
|
| T |
21816888 |
acatcacttaaattttcaaacctcagtgtgtaatgtggatcctctttccatacatgcttcagttttggaagattagatagttttaatttctttaattgag |
21816789 |
T |
|
| Q |
218 |
ta |
219 |
Q |
| |
|
|| |
|
|
| T |
21816788 |
ta |
21816787 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 28 - 219
Target Start/End: Original strand, 22273692 - 22273883
Alignment:
| Q |
28 |
ttacttattcgaagactttgaagttgtttcatatctctagctactgagagtggaaagaggcttaacaagcttttgcattccacaacagatacatcactta |
127 |
Q |
| |
|
||||||| |||||||||||||| || ||||||| ||||| |||||||||||||||||||||| ||||||| ||||| ||||||||||||||||| ||| |
|
|
| T |
22273692 |
ttacttactcgaagactttgaattttcatcatatcactagccactgagagtggaaagaggcttatcaagcttctgcatcccacaacagatacatcattta |
22273791 |
T |
|
| Q |
128 |
aattttgaaacctcatagtgtaatgtggatcctctttccatacatgcttcagttttggaagattggatagttctaatttcttcaattgagta |
219 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||| ||||||| |||||| | |||||||||| |
|
|
| T |
22273792 |
aattttgaaacctcacagtgttatgtggatcctccttccatacatgcttcagttttggaagattagatagttttaatttttgcaattgagta |
22273883 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 138; Significance: 3e-72; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 18 - 219
Target Start/End: Original strand, 30702837 - 30703038
Alignment:
| Q |
18 |
aatcccacagttacttattcgaagactttgaagttgtttcatatctctagctactgagagtggaaagaggcttaacaagcttttgcattccacaacagat |
117 |
Q |
| |
|
||||||||| |||||| | |||||||||||||||| |||||||||||| || ||||||||||||| ||||| |||||||||||||||| |||||||| |
|
|
| T |
30702837 |
aatcccacaattacttgcttgaagactttgaagttgcatcatatctctagaaaccgagagtggaaagaagcttatcaagcttttgcattccgcaacagat |
30702936 |
T |
|
| Q |
118 |
acatcacttaaattttgaaacctcatagtgtaatgtggatcctctttccatacatgcttcagttttggaagattggatagttctaatttcttcaattgag |
217 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||||||||||||| |
|
|
| T |
30702937 |
acatcacttaaattttgaaacctcatagggtaatgtggatcctctttcgatacatgcttcagttttggaagattagatagttttaatttcttcaattgag |
30703036 |
T |
|
| Q |
218 |
ta |
219 |
Q |
| |
|
|| |
|
|
| T |
30703037 |
ta |
30703038 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 18 - 216
Target Start/End: Original strand, 38052788 - 38052986
Alignment:
| Q |
18 |
aatcccacagttacttattcgaagactttgaagttgtttcatatctctagctactgagagtggaaagaggcttaacaagcttttgcattccacaacagat |
117 |
Q |
| |
|
||||||||||||||| | | |||||| ||||||||| |||||||| |||| | |||||||||||||||||||| |||| | | ||| ||||||||||| |
|
|
| T |
38052788 |
aatcccacagttactgactagaagacattgaagttgcatcatatctttagccagtgagagtggaaagaggcttatcaagttctcacatcccacaacagat |
38052887 |
T |
|
| Q |
118 |
acatcacttaaattttgaaacctcatagtgtaatgtggatcctctttccatacatgcttcagttttggaagattggatagttctaatttcttcaattga |
216 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |
|
|
| T |
38052888 |
acatcacttaaattttgaaacctcatagtgtaatgtggatcctctttccatacatgcttcagttttggaagattagatagttttaatttcttcaattga |
38052986 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 18 - 219
Target Start/End: Original strand, 38054986 - 38055187
Alignment:
| Q |
18 |
aatcccacagttacttattcgaagactttgaagttgtttcatatctctagctactgagagtggaaagaggcttaacaagcttttgcattccacaacagat |
117 |
Q |
| |
|
||||||||||||||||| | |||||||||||||| | ||||||||||| |||||||||||||||||||||| ||| |||| |||||| |||| || |
|
|
| T |
38054986 |
aatcccacagttacttactttcagactttgaagttgcattatatctctagccactgagagtggaaagaggcttatcaaactttcacattccttaacatat |
38055085 |
T |
|
| Q |
118 |
acatcacttaaattttgaaacctcatagtgtaatgtggatcctctttccatacatgcttcagttttggaagattggatagttctaatttcttcaattgag |
217 |
Q |
| |
|
|||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| ||||||| ||||||||||||||||| |
|
|
| T |
38055086 |
acatcatttatattttgaaacctcatagtgtaatgtggatcctccttccatacatgcttcaattttggaagattagatagttttaatttcttcaattgag |
38055185 |
T |
|
| Q |
218 |
ta |
219 |
Q |
| |
|
|| |
|
|
| T |
38055186 |
ta |
38055187 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0069 (Bit Score: 123; Significance: 2e-63; HSPs: 2)
Name: scaffold0069
Description:
Target: scaffold0069; HSP #1
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 18 - 216
Target Start/End: Complemental strand, 48088 - 47890
Alignment:
| Q |
18 |
aatcccacagttacttattcgaagactttgaagttgtttcatatctctagctactgagagtggaaagaggcttaacaagcttttgcattccacaacagat |
117 |
Q |
| |
|
||||||||| ||| ||| | ||||| |||||||||| ||| ||||||||||||||| |||||||||||||||| |||||| |||||| ||||||| ||| |
|
|
| T |
48088 |
aatcccacatttaattacttgaagattttgaagttgcatcacatctctagctactgaaagtggaaagaggcttatcaagctattgcatcccacaacggat |
47989 |
T |
|
| Q |
118 |
acatcacttaaattttgaaacctcatagtgtaatgtggatcctctttccatacatgcttcagttttggaagattggatagttctaatttcttcaattga |
216 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| |||||||||||||||| ||||||| ||||||||||| |||| |
|
|
| T |
47988 |
acatcacttaaattttgaaacctcatagtgttatgtggatcctccttccatacatgcctcagttttggaagattagatagttttaatttcttcagttga |
47890 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0069; HSP #2
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 18 - 216
Target Start/End: Complemental strand, 42412 - 42214
Alignment:
| Q |
18 |
aatcccacagttacttattcgaagactttgaagttgtttcatatctctagctactgagagtggaaagaggcttaacaagcttttgcattccacaacagat |
117 |
Q |
| |
|
||||||||| | ||||| | |||||||||||||||| ||||||| ||||| ||||||| ||||||||||||| |||||| |||||| ||||||||||| |
|
|
| T |
42412 |
aatcccacactgacttacttgaagactttgaagttgcatcatatcgctagccactgagaacggaaagaggcttatcaagctattgcatcccacaacagat |
42313 |
T |
|
| Q |
118 |
acatcacttaaattttgaaacctcatagtgtaatgtggatcctctttccatacatgcttcagttttggaagattggatagttctaatttcttcaattga |
216 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| ||||||||| |||||| ||||||| ||||||||||| |||| |
|
|
| T |
42312 |
acatcacttaaattttgaaacctcatagtgttatgtggatcctccttccatacatgcctcagttttgaaagattagatagttttaatttcttcagttga |
42214 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0460 (Bit Score: 111; Significance: 4e-56; HSPs: 2)
Name: scaffold0460
Description:
Target: scaffold0460; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 18 - 216
Target Start/End: Complemental strand, 11857 - 11659
Alignment:
| Q |
18 |
aatcccacagttacttattcgaagactttgaagttgtttcatatctctagctactgagagtggaaagaggcttaacaagcttttgcattccacaacagat |
117 |
Q |
| |
|
||||||||| | ||||| | |||||||||||||||| ||||||||||||| |||||||| |||||||||||| |||||||| |||||| |||||||| |
|
|
| T |
11857 |
aatcccacactgacttacttgaagactttgaagttgcatcatatctctagccactgagagcggaaagaggcttgtcaagctttcacattcctcaacagat |
11758 |
T |
|
| Q |
118 |
acatcacttaaattttgaaacctcatagtgtaatgtggatcctctttccatacatgcttcagttttggaagattggatagttctaatttcttcaattga |
216 |
Q |
| |
|
| |||| ||||||||| |||||| ||||||||||||||||| || ||||||||||||||||| ||||||||||| ||||||| |||||||||||||||| |
|
|
| T |
11757 |
atatcaattaaattttcaaacctaatagtgtaatgtggatcatccttccatacatgcttcagatttggaagattagatagttttaatttcttcaattga |
11659 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0460; HSP #2
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 39 - 216
Target Start/End: Complemental strand, 7271 - 7094
Alignment:
| Q |
39 |
aagactttgaagttgtttcatatctctagctactgagagtggaaagaggcttaacaagcttttgcattccacaacagatacatcacttaaattttgaaac |
138 |
Q |
| |
|
||||||||||||||| ||||||||||||| |||||||| |||||||||||| |||||||| |||||| ||||||||| |||| ||||||||| |||| |
|
|
| T |
7271 |
aagactttgaagttgcatcatatctctagccactgagagcggaaagaggcttgtcaagctttcacattcctcaacagatatatcaattaaattttcaaac |
7172 |
T |
|
| Q |
139 |
ctcatagtgtaatgtggatcctctttccatacatgcttcagttttggaagattggatagttctaatttcttcaattga |
216 |
Q |
| |
|
|| ||||||||||||||||| || ||||||||||||||||| ||||||||||| ||||||| |||||||||||||||| |
|
|
| T |
7171 |
ctaatagtgtaatgtggatcatccttccatacatgcttcagatttggaagattagatagttttaatttcttcaattga |
7094 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0068 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0068
Description:
Target: scaffold0068; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 102 - 219
Target Start/End: Original strand, 34281 - 34398
Alignment:
| Q |
102 |
gcattccacaacagatacatcacttaaattttgaaacctcatagtgtaatgtggatcctctttccatacatgcttcagttttggaagattggatagttct |
201 |
Q |
| |
|
|||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| | |
|
|
| T |
34281 |
gcatcccacaacagatacatcacttaaattttcaaacttcatagtgtaatgtggatcctttttccatacatgcttcagttttggaagattagatagtttt |
34380 |
T |
|
| Q |
202 |
aatttcttcaattgagta |
219 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
34381 |
aatttcttcaattgagta |
34398 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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