View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2342_low_9 (Length: 308)
Name: NF2342_low_9
Description: NF2342
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2342_low_9 |
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Alignment Details
Target: chr7 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 10 - 294
Target Start/End: Complemental strand, 4939800 - 4939518
Alignment:
| Q |
10 |
ataattctgaggtgagggctaagttgtatattgacttaaataattgatacttgctctcatatataggttcatatggttacgtggccccagagattttaga |
109 |
Q |
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| T |
4939800 |
ataattatgaggtgagggctaagttgtatattgacttaaataattgatacttgctctcatatataggttcatatggttacgtggccccagagattttaga |
4939701 |
T |
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| Q |
110 |
aaacaataaagtaacagataagtgtgacgtttactcctttggtaaaattctactagaagtggtatgcttggagaagttagaaaatgttaagagacagaga |
209 |
Q |
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| T |
4939700 |
aaacaataaagtaacagataagtgtgacgtttactcctttggtaatattctactagaagtggtatgcttggaaaagttagaaaatgtt--gagacaaagg |
4939603 |
T |
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| Q |
210 |
ctcccaatggaggagaatattgatgagtatctcaaaggaagcattgcaccaaaatgttgggaagtatttgtagatgtgacaaaaa |
294 |
Q |
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| T |
4939602 |
ttcccaatagaagagaatattgatgagtatctcaaaggaagcattgcaccaaattgttgggaagtatttgtagatgtgacaaaaa |
4939518 |
T |
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