View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2343_low_1 (Length: 348)
Name: NF2343_low_1
Description: NF2343
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2343_low_1 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 324; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 324; E-Value: 0
Query Start/End: Original strand, 1 - 348
Target Start/End: Original strand, 10086107 - 10086454
Alignment:
| Q |
1 |
catgcttaatgggaatgaaactttcaaacaaataaaaggaatattatatgtttatattgaaatggaaaggaatattaaatgttataacgtgttgatcaca |
100 |
Q |
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| T |
10086107 |
catgcttaatgggcatgaaacttttaaacaaataaaaggaatattatatgtttatattgaaatggaaaggaatattaaatgttataacgtgttgatcaca |
10086206 |
T |
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| Q |
101 |
atgcatcataggatataggattaagttaaggtgttttgttttgtatttaagttaacaaggtagcaaacacgattgttatattatcctgattaagaaacca |
200 |
Q |
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| T |
10086207 |
atgcatcatagaatataggattaagttgaggtgttttgttttgtatttaagttaacaaggtagcaaacacgattgttatattatcctaattaagaaacca |
10086306 |
T |
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| Q |
201 |
tgacaaatgatatataatacaatgtcttagtataatattctatttgattctcttttccattttttcaattaaaaagaaagaagtgttatattttgctact |
300 |
Q |
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| T |
10086307 |
tgacaaatgatatataatacaatgtcttagtataatattctatttgattctcttttccattttttcaattaaaaagaaagaagtgttatattttgctact |
10086406 |
T |
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| Q |
301 |
ttataatttttccttatcaataaataggaatgatctggcgtatatatc |
348 |
Q |
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| T |
10086407 |
ttataatttttccatatcaataaataggaatgatctggcgtatatatc |
10086454 |
T |
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