View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2343_low_4 (Length: 277)
Name: NF2343_low_4
Description: NF2343
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2343_low_4 |
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Alignment Details
Target: chr6 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 1 - 262
Target Start/End: Original strand, 3714253 - 3714514
Alignment:
| Q |
1 |
tagattgaaatactagaaatacactttatttaattctaatagaaagagtaagtttcaagtaacaacaacatgtaccattttttcaacaaaagtttgatct |
100 |
Q |
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| T |
3714253 |
tagattgaaatactagaaatacactttatttaattctaatagaaagagtaagtttcaagtaacaacaacatgtaccattttttcaacaaaagtttgatct |
3714352 |
T |
|
| Q |
101 |
taatttcttgcagccctaccaggatttagtgggtaggataatctgaatctcaatgcnnnnnnncgataattttcaatccacttcatagtgtacatgaccc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
3714353 |
taatttcttgcagccctaccaggatttagtgggtaggataatctgaatctcaatgcaaaaaaacgataattttcaatccacttcatagtgtacatgaccc |
3714452 |
T |
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| Q |
201 |
agtgatcacacgaaagagaaaggactatctattgtttgggtgatggacctggttgttgttat |
262 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3714453 |
agtgatcacacgaaagagaaaggactatctattgtttgggtgatggacctggttgttgttat |
3714514 |
T |
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