View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2345_high_9 (Length: 288)
Name: NF2345_high_9
Description: NF2345
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2345_high_9 |
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Alignment Details
Target: chr7 (Bit Score: 248; Significance: 1e-138; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 17 - 275
Target Start/End: Original strand, 8728556 - 8728815
Alignment:
| Q |
17 |
atatcctgacacttccattgtgcaacagtgcacactttaccatatttaattaactactatatactatgataattcccataatttatagttacattt-tat |
115 |
Q |
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| T |
8728556 |
atatcctgacacttccattgtgcaacagtgcacactttaccatatttaattaactactatatactatgataattcccataattcatagttacatttatat |
8728655 |
T |
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| Q |
116 |
tattccaatattttactaaatgtattttcccaagttggaacagtatttgcatgatccttttaacatttcgagattatttggcattttgttaattataaaa |
215 |
Q |
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| T |
8728656 |
tattccaatattttactaaatgtattttcccaagttggaacagtatttgcatgatccttttaacatttcgagattatttggcattttgttaattataaaa |
8728755 |
T |
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| Q |
216 |
cattttgtagtaacatatgctggtaggttcatggatcacgggttagacagtggcacaatt |
275 |
Q |
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| T |
8728756 |
cattttgtagtaacatatgctggtaggttcatggatcacgggttagacagtggcacaatt |
8728815 |
T |
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