View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2345_low_8 (Length: 309)
Name: NF2345_low_8
Description: NF2345
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2345_low_8 |
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Alignment Details
Target: chr4 (Bit Score: 281; Significance: 1e-157; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 18 - 298
Target Start/End: Original strand, 56492456 - 56492736
Alignment:
| Q |
18 |
gtgattgggagtggtattggtggactgagttgtgcagcactgttggcaagatatgaacaagatgttgtcgttttcgaaagccacgaccatgctggaggtg |
117 |
Q |
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| T |
56492456 |
gtgattgggagtggtattggtggactgagttgtgcagcactgttggcaagatatgaacaagatgttgtcgttttcgaaagccacgaccatgctggaggtg |
56492555 |
T |
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| Q |
118 |
ctgctcattcttttgatgtcaaaggctataagtttgattccggtccatcattattctctggtttgcagtcaagaggtccacaggctaaccctcttgctca |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
56492556 |
ctgctcattcttttgatgtcaaaggctataagtttgattccggtccatcattattctctggtttgcagtcaagaggtccacaggctaaccctcttgctca |
56492655 |
T |
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| Q |
218 |
agttcttgatgctttgggagagtccgtcccctgcgctacttatgattcatggatggtccatgtacctgaagctgatttctt |
298 |
Q |
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| T |
56492656 |
agttcttgatgctttgggagagtccgtcccctgcgctacttatgattcatggatggtccatgtacctgaagctgatttctt |
56492736 |
T |
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