View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2347_high_24 (Length: 240)
Name: NF2347_high_24
Description: NF2347
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2347_high_24 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 19 - 240
Target Start/End: Complemental strand, 45145079 - 45144858
Alignment:
| Q |
19 |
cgtgcagcatgcttaattgtagcagctgcaccaacaacatttgtagccatagttttctcaaattcattcagatcaagatcaagtattccagataaagagc |
118 |
Q |
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| T |
45145079 |
cgtgcagcatgcttaattgtagcagctgcaccaacaacatttgtagccatagttttctcaaattcattcagatcaagatcaagtattccagataaagagc |
45144980 |
T |
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| Q |
119 |
ctattattcctgcattactaaacaaaatatcgatgcaaccgtgtttttccaaagtgaaatgaattgtttcttcgacttgtttttcgtccctgacatcaca |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45144979 |
ctattattcctgcattactaaacaaaatatcgatgcaaccgtgtttttccaaagtgaaatgaattgtttcttcgacttgtttttcgtccctgacatcaca |
45144880 |
T |
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| Q |
219 |
atgatggtatgttactttgtct |
240 |
Q |
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|||||||||||||||||||||| |
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| T |
45144879 |
atgatggtatgttactttgtct |
45144858 |
T |
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