View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2347_high_25 (Length: 239)

Name: NF2347_high_25
Description: NF2347
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2347_high_25
NF2347_high_25
[»] chr1 (4 HSPs)
chr1 (18-239)||(52082430-52082651)
chr1 (23-239)||(52092632-52092847)
chr1 (74-131)||(35901779-35901836)
chr1 (171-239)||(19468528-19468596)
[»] chr4 (6 HSPs)
chr4 (74-192)||(1754424-1754542)
chr4 (60-193)||(6006218-6006351)
chr4 (170-239)||(1548453-1548522)
chr4 (74-133)||(1528338-1528397)
chr4 (74-109)||(12120301-12120336)
chr4 (170-210)||(546914-546954)
[»] chr5 (5 HSPs)
chr5 (170-239)||(20478111-20478180)
chr5 (171-239)||(41901564-41901632)
chr5 (56-211)||(12845480-12845635)
chr5 (170-235)||(32267476-32267541)
chr5 (174-239)||(41889583-41889648)
[»] chr8 (4 HSPs)
chr8 (83-239)||(18315302-18315458)
chr8 (170-239)||(27922509-27922578)
chr8 (74-145)||(5767778-5767849)
chr8 (176-239)||(17636430-17636493)
[»] chr2 (3 HSPs)
chr2 (176-234)||(44575529-44575587)
chr2 (184-239)||(32785801-32785856)
chr2 (170-239)||(45245114-45245183)
[»] chr6 (6 HSPs)
chr6 (170-239)||(6432162-6432231)
chr6 (175-235)||(6585270-6585330)
chr6 (168-239)||(6426510-6426581)
chr6 (171-238)||(14802338-14802405)
chr6 (170-239)||(6394865-6394934)
chr6 (170-238)||(6402861-6402929)
[»] chr3 (3 HSPs)
chr3 (75-137)||(514859-514921)
chr3 (170-239)||(13470761-13470830)
chr3 (170-231)||(51113818-51113879)


Alignment Details
Target: chr1 (Bit Score: 210; Significance: 1e-115; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 18 - 239
Target Start/End: Original strand, 52082430 - 52082651
Alignment:
Q  18 aaaattaccatcaccatccagaaattaacatcagcacacacattatgacaatcccacaaatttatctctctcagtcgtgtgcagttttctactacgtgcc 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52082430 aaaattaccatcaccatccagaaattaacatcagcacacacattatgacaatcccacaaatttatctctctcagtcgtgtgcagttttctactacgtgcc 52082529  T
Q  118 tcactcctttctctgtgatatgatcacaccgttccaagtccaattgtagtatcccacaacaactccttgagatcacatacaatgtttcatcatcaatttt 217  Q
      ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  52082530 cgactcctttctctgtgatatgatcacaccgttccaagtccaattgtagtatcccacaacaactctttgagatcacatacaatgtttcatcatcaatttt 52082629  T
Q  218 tgtctttgacaagttcaacacc 239  Q
    ||||||||||||||||||||||    
T  52082630 tgtctttgacaagttcaacacc 52082651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 23 - 239
Target Start/End: Original strand, 52092632 - 52092847
Alignment:
Q  23 taccatcaccatccagaaattaacatcagcacacacattatgacaatcccacaaatttatctctctcagtcgtgtgcagttttctactacgtgcctcact 122  Q
    |||||||| | ||||||||||||||||| ||||||| | | ||||| | |  | |||||||||||||| |||||||||||||| ||||||||||||||||    
T  52092632 taccatcatcgtccagaaattaacatcaacacacacctcacgacaacctcgtatatttatctctctcaatcgtgtgcagtttt-tactacgtgcctcact 52092730  T
Q  123 cctttctctgtgatatgatcacaccgttccaagtccaattgtagtatcccacaacaactccttgagatcacatacaatgtttcatcatcaatttttgtct 222  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||||||||||| |||||||||||||||||||    
T  52092731 cctttctctgtgatatgatcacaccgttccaagtccaattgtagtagcccacaaaaactctttgagatcacatacaatgtgtcatcatcaatttttgtct 52092830  T
Q  223 ttgacaagttcaacacc 239  Q
    ||| |||||||||||||    
T  52092831 ttgccaagttcaacacc 52092847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 131
Target Start/End: Complemental strand, 35901836 - 35901779
Alignment:
Q  74 caaatttatctctctcagtcgtgtgcagttttctactacgtgcctcactcctttctct 131  Q
    ||||||||||||||||||| |||| ||||||||||  || || |||||||||||||||    
T  35901836 caaatttatctctctcagttgtgtacagttttctatgacttgtctcactcctttctct 35901779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 239
Target Start/End: Complemental strand, 19468596 - 19468528
Alignment:
Q  171 ccacaacaactccttgagatcacatacaatgtttcatcatcaatttttgtctttgacaagttcaacacc 239  Q
    ||||||||  || ||||||||||||| | ||||||||||||||  ||||| | |||||| |||||||||    
T  19468596 ccacaacagttctttgagatcacataaagtgtttcatcatcaacctttgtatctgacaacttcaacacc 19468528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 74 - 192
Target Start/End: Original strand, 1754424 - 1754542
Alignment:
Q  74 caaatttatctctctcagtcgtgtgcagttttctactacgtgcctcactcctttctctgtgatatgatcacaccgttccaagtccaattgtagtatccca 173  Q
    |||| |||||||| |||| |||||||| ||||||||||| ||| ||||||||||||||||||||| || |||   ||| || |||||||| ||||  |||    
T  1754424 caaacttatctctttcaggcgtgtgcatttttctactacttgcttcactcctttctctgtgatattataacatttttctaaatccaattgcagtagtcca 1754523  T
Q  174 caacaactccttgagatca 192  Q
     | |||||| |||||||||    
T  1754524 gagcaactctttgagatca 1754542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 60 - 193
Target Start/End: Original strand, 6006218 - 6006351
Alignment:
Q  60 ttatgacaatcccacaaatttatctctctcagtcgtgtgcagttttctactacgtgcctcactcctttctctgtgatatgatcacaccgttccaagtcca 159  Q
    ||||||||||||  ||||||||||||||||| | || ||||||||||||| || ||| ||||||| |||| ||||| || || ||| ||| |||| || |    
T  6006218 ttatgacaatcctgcaaatttatctctctcaattgtttgcagttttctacgacttgcatcactcccttctttgtgacatcataacaacgtcccaaatcaa 6006317  T
Q  160 attgtagtatcccacaacaactccttgagatcac 193  Q
     ||| |||| |||| | |||||| ||||||||||    
T  6006318 gttgcagtagcccaaagcaactcattgagatcac 6006351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 239
Target Start/End: Complemental strand, 1548522 - 1548453
Alignment:
Q  170 cccacaacaactccttgagatcacatacaatgtttcatcatcaatttttgtctttgacaagttcaacacc 239  Q
    ||||||||||||| ||||||||||||  | |||||||||||||||  |||| | ||||||||||||||||    
T  1548522 cccacaacaactctttgagatcacattgagtgtttcatcatcaatacttgtatgtgacaagttcaacacc 1548453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 133
Target Start/End: Complemental strand, 1528397 - 1528338
Alignment:
Q  74 caaatttatctctctcagtcgtgtgcagttttctactacgtgcctcactcctttctctgt 133  Q
    ||||||||||||||||||| |||||||||||||||| || ||| | ||||| ||||||||    
T  1528397 caaatttatctctctcagttgtgtgcagttttctacaacttgcatgactccattctctgt 1528338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 109
Target Start/End: Complemental strand, 12120336 - 12120301
Alignment:
Q  74 caaatttatctctctcagtcgtgtgcagttttctac 109  Q
    ||||||||||||||||||| ||||||||||||||||    
T  12120336 caaatttatctctctcagttgtgtgcagttttctac 12120301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 210
Target Start/End: Original strand, 546914 - 546954
Alignment:
Q  170 cccacaacaactccttgagatcacatacaatgtttcatcat 210  Q
    ||||||||||||| ||||||||||||| | |||||||||||    
T  546914 cccacaacaactctttgagatcacatagagtgtttcatcat 546954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000001; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 239
Target Start/End: Complemental strand, 20478180 - 20478111
Alignment:
Q  170 cccacaacaactccttgagatcacatacaatgtttcatcatcaatttttgtctttgacaagttcaacacc 239  Q
    |||||||||| |||||||||||||| | |||||||| |||||||  ||||| | ||||||||||||||||    
T  20478180 cccacaacaattccttgagatcacagataatgtttcgtcatcaacatttgtatatgacaagttcaacacc 20478111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 171 - 239
Target Start/End: Complemental strand, 41901632 - 41901564
Alignment:
Q  171 ccacaacaactccttgagatcacatacaatgtttcatcatcaatttttgtctttgacaagttcaacacc 239  Q
    |||||||||||| ||||||||| ||| | || ||||||||||| |||||| | ||||||||||||||||    
T  41901632 ccacaacaactctttgagatcatataaagtgcttcatcatcaacttttgtatatgacaagttcaacacc 41901564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 211
Target Start/End: Original strand, 12845480 - 12845635
Alignment:
Q  56 cacattatgacaatcccacaaatttatctctctcagtcgtgtgcagttttctactacgtgcctcactcctttctctgtgatatgatcacaccgttccaag 155  Q
    |||||| |||||||||| |||||| ||||||||||    |||||| ||| |||| || ||||||||||| |||||||| | || || |||   ||||| |    
T  12845480 cacattttgacaatccctcaaattgatctctctcaactttgtgcattttgctaccacttgcctcactcccttctctgtaacatcattacaattttccagg 12845579  T
Q  156 tccaattgtagtatcccacaacaactccttgagatcacatacaatgtttcatcatc 211  Q
    |||||||| | ||  |||||||||||| |||||||  |||| | || |||||||||    
T  12845580 tccaattgcaatagaccacaacaactctttgagattgcatatagtgcttcatcatc 12845635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 235
Target Start/End: Original strand, 32267476 - 32267541
Alignment:
Q  170 cccacaacaactccttgagatcacatacaatgtttcatcatcaatttttgtctttgacaagttcaa 235  Q
    ||||||||||||| ||||||||| ||| | || ||||||||||| | |||| | ||||||||||||    
T  32267476 cccacaacaactctttgagatcatataaagtgcttcatcatcaactattgtttgtgacaagttcaa 32267541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 239
Target Start/End: Complemental strand, 41889648 - 41889583
Alignment:
Q  174 caacaactccttgagatcacatacaatgtttcatcatcaatttttgtctttgacaagttcaacacc 239  Q
    ||||||||| ||||||||  ||| | |||||||||||||| |||||| | ||| ||||||||||||    
T  41889648 caacaactctttgagatcttataaagtgtttcatcatcaacttttgtatatgataagttcaacacc 41889583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.000000000005; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 83 - 239
Target Start/End: Complemental strand, 18315458 - 18315302
Alignment:
Q  83 ctctctcagtcgtgtgcagttttctactacgtgcctcactcctttctctgtgatatgatcacaccgttccaagtccaattgtagtatcccacaacaactc 182  Q
    |||| ||||| |||||||||||||||| || | | |  ||||||||||||||| || |  ||| ||||||||   || ||| |  | || || |||||||    
T  18315458 ctctatcagttgtgtgcagttttctaccacatacttttctcctttctctgtgacatcacaacagcgttccaataacagttgcaaaagcctacgacaactc 18315359  T
Q  183 cttgagatcacatacaatgtttcatcatcaatttttgtctttgacaagttcaacacc 239  Q
     ||||||||||||| | || ||||||||||| |||||| | ||||||||||||||||    
T  18315358 tttgagatcacatagagtgcttcatcatcaacttttgtatgtgacaagttcaacacc 18315302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 239
Target Start/End: Original strand, 27922509 - 27922578
Alignment:
Q  170 cccacaacaactccttgagatcacatacaatgtttcatcatcaatttttgtctttgacaagttcaacacc 239  Q
    ||||||||||||| ||||||||| ||| | || |||||||||||  ||||| | ||||||||||||||||    
T  27922509 cccacaacaactctttgagatcatataaagtgcttcatcatcaacatttgtatatgacaagttcaacacc 27922578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 145
Target Start/End: Complemental strand, 5767849 - 5767778
Alignment:
Q  74 caaatttatctctctcagtcgtgtgcagttttctactacgtgcctcactcctttctctgtgatatgatcaca 145  Q
    ||||||||||||||| ||| |||||||||| | ||| |||||| | ||||| || |||||||||| ||||||    
T  5767849 caaatttatctctctgagttgtgtgcagttgtttaccacgtgcatgactcccttgtctgtgatataatcaca 5767778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 239
Target Start/End: Complemental strand, 17636493 - 17636430
Alignment:
Q  176 acaactccttgagatcacatacaatgtttcatcatcaatttttgtctttgacaagttcaacacc 239  Q
    ||||||| |||||||||||||||||| |||||| |||| |  ||| | ||||||||||||||||    
T  17636493 acaactctttgagatcacatacaatgcttcatcgtcaactcctgtttgtgacaagttcaacacc 17636430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 35; Significance: 0.00000000008; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 234
Target Start/End: Complemental strand, 44575587 - 44575529
Alignment:
Q  176 acaactccttgagatcacatacaatgtttcatcatcaatttttgtctttgacaagttca 234  Q
    ||||||| ||||||||||||||||||| |||||||||| | |||| |||||||| ||||    
T  44575587 acaactctttgagatcacatacaatgtgtcatcatcaactcttgtttttgacaaattca 44575529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 239
Target Start/End: Complemental strand, 32785856 - 32785801
Alignment:
Q  184 ttgagatcacatacaatgtttcatcatcaatttttgtctttgacaagttcaacacc 239  Q
    ||||||||||||| | || ||||||||||||| |||| | ||||||||||||||||    
T  32785856 ttgagatcacataaagtgcttcatcatcaattcttgtatgtgacaagttcaacacc 32785801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 239
Target Start/End: Complemental strand, 45245183 - 45245114
Alignment:
Q  170 cccacaacaactccttgagatcacatacaatgtttcatcatcaatttttgtctttgacaagttcaacacc 239  Q
    ||||| ||||||| ||||||||||||  | ||||||||||||||   |||||| |||||| |||||||||    
T  45245183 cccacgacaactctttgagatcacatggagtgtttcatcatcaaccattgtctctgacaaattcaacacc 45245114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 34; Significance: 0.0000000003; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 239
Target Start/End: Original strand, 6432162 - 6432231
Alignment:
Q  170 cccacaacaactccttgagatcacatacaatgtttcatcatcaatttttgtctttgacaagttcaacacc 239  Q
    |||||||||| || || |||||||||| | ||||||||||||||   |||| ||||||||||||||||||    
T  6432162 cccacaacaattctttaagatcacataaagtgtttcatcatcaacgcttgtatttgacaagttcaacacc 6432231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 235
Target Start/End: Complemental strand, 6585330 - 6585270
Alignment:
Q  175 aacaactccttgagatcacatacaatgtttcatcatcaatttttgtctttgacaagttcaa 235  Q
    |||||||| ||||||||||||| | ||||||||||||||  ||||| | ||||||||||||    
T  6585330 aacaactctttgagatcacatagagtgtttcatcatcaacctttgtatctgacaagttcaa 6585270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 239
Target Start/End: Original strand, 6426510 - 6426581
Alignment:
Q  168 atcccacaacaactccttgagatcacatacaatgtttcatcatcaatttttgtctttgacaagttcaacacc 239  Q
    |||| ||||||| || |||||||| |||| || ||||||||||||||  |||| |||||||| |||||||||    
T  6426510 atccgacaacaattctttgagatcgcataaaaagtttcatcatcaatgcttgtgtttgacaaattcaacacc 6426581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 238
Target Start/End: Original strand, 14802338 - 14802405
Alignment:
Q  171 ccacaacaactccttgagatcacatacaatgtttcatcatcaatttttgtctttgacaagttcaacac 238  Q
    ||||||||| || |||| |||||||| | ||||||||||||||  ||||| |||||||| ||||||||    
T  14802338 ccacaacaattctttgaaatcacatagagtgtttcatcatcaacctttgtatttgacaaattcaacac 14802405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 239
Target Start/End: Original strand, 6394865 - 6394934
Alignment:
Q  170 cccacaacaactccttgagatcacatacaatgtttcatcatcaatttttgtctttgacaagttcaacacc 239  Q
    |||||||||| || ||||||||||| | |  |||||||||||||   |||| ||||||||||||||||||    
T  6394865 cccacaacaattctttgagatcacagaaagagtttcatcatcaacgcttgtatttgacaagttcaacacc 6394934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 238
Target Start/End: Original strand, 6402861 - 6402929
Alignment:
Q  170 cccacaacaactccttgagatcacatacaatgtttcatcatcaatttttgtctttgacaagttcaacac 238  Q
    ||||| |||| || ||||||||||||| | ||||||||||||||  || || | |||||||||||||||    
T  6402861 cccactacaattctttgagatcacatagagtgtttcatcatcaaccttcgtatctgacaagttcaacac 6402929  T

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Target: chr3 (Bit Score: 31; Significance: 0.00000002; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 137
Target Start/End: Complemental strand, 514921 - 514859
Alignment:
Q  75 aaatttatctctctcagtcgtgtgcagttttctactacgtgcctcactcctttctctgtgata 137  Q
    ||||| |||||||||||||||||||||||||  || || ||| |||||||  |||||||||||    
T  514921 aaattgatctctctcagtcgtgtgcagtttttcaccacatgcttcactcccgtctctgtgata 514859  T

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Target: chr3; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 239
Target Start/End: Complemental strand, 13470830 - 13470761
Alignment:
Q  170 cccacaacaactccttgagatcacatacaatgtttcatcatcaatttttgtctttgacaagttcaacacc 239  Q
    |||||||||| || ||||||||| ||| | ||||| ||||| ||  ||||| ||||||||||||||||||    
T  13470830 cccacaacaattctttgagatcatatagagtgttttatcattaacctttgtatttgacaagttcaacacc 13470761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 231
Target Start/End: Complemental strand, 51113879 - 51113818
Alignment:
Q  170 cccacaacaactccttgagatcacatacaatgtttcatcatcaatttttgtctttgacaagt 231  Q
    ||||||||||||| | ||||||||||| | ||||||||||||||   |||| ||||||||||    
T  51113879 cccacaacaactcttcgagatcacatagagtgtttcatcatcaaccattgtatttgacaagt 51113818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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