View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2347_low_4 (Length: 482)
Name: NF2347_low_4
Description: NF2347
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2347_low_4 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 439; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 439; E-Value: 0
Query Start/End: Original strand, 17 - 482
Target Start/End: Complemental strand, 31855233 - 31854770
Alignment:
| Q |
17 |
agtacaataatcgagtctgtcatacctcatgtgtaaaagctaataatattggtgagtaaatttcttgaccagttgtacgacgccagcgtgaaccagctcc |
116 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31855233 |
agtacaataatcgagtctgtcatacctcatgtgtaaaagctaataatattggtgagtaaatttcttgaccagttgtacgacgccagcgtgaaccagctcc |
31855134 |
T |
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| Q |
117 |
aacgttgtggattccgatatagtaatttcctctaacctatgtagaattagaaatgacagaaaaagggaatataataaatctgtatgctatatagagatag |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31855133 |
aacgttgtggattccgatatagtaatttcctctaacctatgtagaattagaaatgacagaaaaagggaatataataaatctgtatgctatatagagatag |
31855034 |
T |
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| Q |
217 |
aagataggaaaacatggaggatgcataaaaatgtaaactaattggtgacatttccatactattagtccatcacatgtactattattatcagcctttgcta |
316 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
31855033 |
aagataggaaaacatggaggatgcataaaaatgtaaactaattggtgacatttccatactgttagtccatcacatgtactattattatcagcctttgcta |
31854934 |
T |
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| Q |
317 |
tgcaaacttgttcatcgagtggttcccctactcctctaccgtcgtcctcgatcaagcgccttaagtagtacacaccgagtgtcaatagattttatacaag |
416 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31854933 |
tgcaaacttgttcatcgagtggttcccctactcctctaccgtcgtcctcgatcaagcgccttaagtagtacacaccgagtgtcaatagattttatacaat |
31854834 |
T |
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| Q |
417 |
ataataatagattgaaatagataataaaaatttggttagatacctatgaagcatcaattccacttc |
482 |
Q |
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|||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| |
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| T |
31854833 |
ataataat--attgaaatagataatgaaaatttggttagatacctatgaagcatcaattcaacttc |
31854770 |
T |
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