View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2347_low_5 (Length: 458)

Name: NF2347_low_5
Description: NF2347
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2347_low_5
NF2347_low_5
[»] chr5 (49 HSPs)
chr5 (260-439)||(28211256-28211435)
chr5 (2-177)||(19359137-19359312)
chr5 (2-177)||(2865124-2865299)
chr5 (2-177)||(18183338-18183513)
chr5 (2-177)||(5819298-5819473)
chr5 (2-177)||(8647439-8647614)
chr5 (2-177)||(24362205-24362380)
chr5 (2-177)||(8460931-8461106)
chr5 (2-177)||(15708972-15709146)
chr5 (2-177)||(29455111-29455286)
chr5 (6-177)||(14215616-14215787)
chr5 (2-175)||(15372242-15372415)
chr5 (2-177)||(164560-164735)
chr5 (13-177)||(14463901-14464064)
chr5 (18-175)||(5818932-5819090)
chr5 (18-175)||(18182973-18183131)
chr5 (52-177)||(19359555-19359680)
chr5 (18-177)||(8647822-8647982)
chr5 (2-177)||(16018590-16018763)
chr5 (2-176)||(24331929-24332107)
chr5 (18-172)||(24361843-24361997)
chr5 (26-177)||(8461323-8461475)
chr5 (18-176)||(2864756-2864915)
chr5 (18-172)||(24325218-24325372)
chr5 (18-176)||(14215243-14215402)
chr5 (26-177)||(164192-164343)
chr5 (16-175)||(16018969-16019129)
chr5 (18-177)||(24331560-24331722)
chr5 (2-156)||(25000112-25000266)
chr5 (16-177)||(25000471-25000633)
chr5 (36-177)||(7349420-7349561)
chr5 (18-177)||(29454741-29454901)
chr5 (58-177)||(4222147-4222266)
chr5 (65-176)||(15371873-15371983)
chr5 (52-177)||(7348560-7348685)
chr5 (18-177)||(15709353-15709512)
chr5 (38-177)||(4623149-4623286)
chr5 (40-177)||(4219664-4219800)
chr5 (40-172)||(6019177-6019309)
chr5 (60-180)||(6018312-6018431)
chr5 (50-165)||(4624642-4624757)
chr5 (16-177)||(41834443-41834604)
chr5 (36-96)||(13814131-13814190)
chr5 (52-96)||(14462686-14462730)
chr5 (103-177)||(15029780-15029854)
chr5 (103-177)||(22651782-22651856)
chr5 (18-179)||(10721785-10721945)
chr5 (103-175)||(4966819-4966891)
chr5 (2-42)||(16752717-16752757)
[»] chr1 (47 HSPs)
chr1 (2-177)||(50970647-50970822)
chr1 (2-175)||(15173099-15173272)
chr1 (2-177)||(18984120-18984295)
chr1 (2-175)||(5962947-5963120)
chr1 (9-177)||(5540194-5540362)
chr1 (2-177)||(29869621-29869796)
chr1 (2-176)||(33144288-33144462)
chr1 (9-177)||(15646571-15646739)
chr1 (9-177)||(29306954-29307122)
chr1 (2-177)||(21856412-21856587)
chr1 (2-177)||(8678911-8679085)
chr1 (2-177)||(9018974-9019149)
chr1 (2-177)||(17433217-17433392)
chr1 (2-176)||(39154021-39154195)
chr1 (4-177)||(26859431-26859603)
chr1 (9-177)||(29307317-29307486)
chr1 (61-179)||(8678540-8678658)
chr1 (16-176)||(17433597-17433758)
chr1 (18-177)||(29870003-29870163)
chr1 (26-180)||(4636363-4636518)
chr1 (52-179)||(5539815-5539942)
chr1 (20-177)||(50970279-50970437)
chr1 (52-177)||(18984538-18984663)
chr1 (18-170)||(33143925-33144078)
chr1 (18-177)||(15173478-15173637)
chr1 (18-176)||(21856044-21856203)
chr1 (52-177)||(39154439-39154564)
chr1 (61-177)||(26859060-26859176)
chr1 (9-177)||(9019338-9019507)
chr1 (61-177)||(15646193-15646309)
chr1 (38-177)||(52268291-52268430)
chr1 (52-177)||(5962579-5962704)
chr1 (4-118)||(4636033-4636146)
chr1 (62-176)||(52269177-52269291)
chr1 (92-177)||(2733416-2733501)
chr1 (52-177)||(17112283-17112407)
chr1 (103-181)||(47826961-47827039)
chr1 (78-170)||(47827033-47827125)
chr1 (97-177)||(50419725-50419805)
chr1 (51-138)||(39843193-39843280)
chr1 (38-177)||(52235074-52235213)
chr1 (8-177)||(17088516-17088684)
chr1 (50-177)||(52233739-52233866)
chr1 (103-177)||(29438931-29439005)
chr1 (52-177)||(50926661-50926786)
chr1 (127-176)||(50304441-50304490)
chr1 (127-175)||(17641864-17641912)
[»] chr7 (38 HSPs)
chr7 (2-175)||(19830423-19830596)
chr7 (2-177)||(19590526-19590701)
chr7 (2-177)||(37786768-37786943)
chr7 (4-177)||(32004985-32005158)
chr7 (4-177)||(35289272-35289445)
chr7 (2-177)||(38858644-38858819)
chr7 (2-175)||(29100220-29100393)
chr7 (4-177)||(2659211-2659384)
chr7 (4-177)||(34534162-34534335)
chr7 (2-175)||(4641443-4641616)
chr7 (9-172)||(23953105-23953268)
chr7 (18-177)||(19590909-19591069)
chr7 (9-175)||(4478076-4478242)
chr7 (18-177)||(2658840-2659000)
chr7 (18-177)||(38859025-38859185)
chr7 (19-177)||(32004615-32004774)
chr7 (20-177)||(37787153-37787311)
chr7 (62-177)||(35288904-35289019)
chr7 (52-165)||(29099863-29099976)
chr7 (36-177)||(38160952-38161093)
chr7 (26-177)||(34533792-34533944)
chr7 (40-177)||(28583440-28583577)
chr7 (18-175)||(4641828-4641983)
chr7 (18-177)||(19830804-19830963)
chr7 (61-177)||(23952731-23952848)
chr7 (37-177)||(28584326-28584466)
chr7 (2-178)||(35579256-35579431)
chr7 (103-177)||(39137004-39137078)
chr7 (103-177)||(49064035-49064109)
chr7 (59-176)||(33880622-33880739)
chr7 (2-175)||(35578902-35579074)
chr7 (103-175)||(787257-787329)
chr7 (18-177)||(34595158-34595317)
chr7 (2-176)||(9181534-9181708)
chr7 (9-44)||(32427397-32427432)
chr7 (103-177)||(27245204-27245278)
chr7 (125-177)||(26048439-26048491)
chr7 (103-179)||(39388739-39388815)
[»] scaffold0295 (2 HSPs)
scaffold0295 (2-177)||(4794-4969)
scaffold0295 (64-176)||(5222-5334)
[»] chr6 (35 HSPs)
chr6 (2-177)||(10900299-10900474)
chr6 (2-177)||(20741101-20741276)
chr6 (2-177)||(11276951-11277126)
chr6 (2-177)||(18257138-18257313)
chr6 (2-177)||(15828010-15828185)
chr6 (4-177)||(1149802-1149976)
chr6 (2-179)||(31470685-31470862)
chr6 (2-177)||(11444988-11445163)
chr6 (4-177)||(12935528-12935701)
chr6 (2-177)||(28472638-28472812)
chr6 (2-177)||(29859827-29860001)
chr6 (18-177)||(2319673-2319832)
chr6 (9-175)||(10899942-10900109)
chr6 (2-177)||(18505288-18505463)
chr6 (2-175)||(2322588-2322760)
chr6 (18-177)||(12935158-12935318)
chr6 (2-177)||(23074000-23074164)
chr6 (18-177)||(11445371-11445531)
chr6 (18-177)||(22219737-22219897)
chr6 (18-177)||(23075512-23075672)
chr6 (15-177)||(4811373-4811535)
chr6 (52-175)||(18504922-18505045)
chr6 (61-177)||(18257565-18257681)
chr6 (26-177)||(20741493-20741648)
chr6 (18-177)||(31470316-31470476)
chr6 (9-177)||(11276591-11276760)
chr6 (36-176)||(29033436-29033577)
chr6 (52-177)||(15827639-15827766)
chr6 (50-175)||(3835143-3835268)
chr6 (36-176)||(29035040-29035180)
chr6 (52-177)||(4811675-4811800)
chr6 (90-177)||(1149466-1149553)
chr6 (37-177)||(18296146-18296285)
chr6 (122-177)||(22534214-22534269)
chr6 (3-177)||(35163557-35163732)
[»] chr3 (65 HSPs)
chr3 (2-177)||(39555946-39556121)
chr3 (4-177)||(20840561-20840734)
chr3 (2-177)||(31779021-31779196)
chr3 (2-175)||(5136983-5137156)
chr3 (2-175)||(41046703-41046876)
chr3 (2-177)||(24300925-24301100)
chr3 (2-177)||(37726930-37727105)
chr3 (2-177)||(23644463-23644638)
chr3 (2-177)||(26837725-26837899)
chr3 (2-177)||(30104483-30104657)
chr3 (26-177)||(48452990-48453141)
chr3 (2-176)||(25853596-25853770)
chr3 (4-177)||(32535330-32535507)
chr3 (9-177)||(43973442-43973610)
chr3 (2-177)||(27393946-27394121)
chr3 (2-177)||(17464860-17465036)
chr3 (2-174)||(22425182-22425354)
chr3 (2-175)||(26274936-26275108)
chr3 (18-177)||(37727314-37727474)
chr3 (18-177)||(43973824-43973984)
chr3 (37-175)||(25612381-25612519)
chr3 (18-177)||(20840945-20841105)
chr3 (18-177)||(25853235-25853395)
chr3 (18-177)||(27393662-27393822)
chr3 (18-177)||(39555579-39555739)
chr3 (18-177)||(4275748-4275908)
chr3 (18-177)||(5137365-5137525)
chr3 (18-177)||(31778654-31778814)
chr3 (16-177)||(29801798-29801960)
chr3 (52-177)||(17464492-17464617)
chr3 (52-175)||(32534962-32535085)
chr3 (52-177)||(30098182-30098307)
chr3 (18-177)||(23644849-23645009)
chr3 (57-177)||(29801357-29801477)
chr3 (18-177)||(22424815-22424975)
chr3 (18-175)||(26837363-26837521)
chr3 (36-177)||(50116812-50116953)
chr3 (52-175)||(26274570-26274693)
chr3 (39-177)||(23228414-23228551)
chr3 (38-177)||(32697106-32697244)
chr3 (18-175)||(24300560-24300717)
chr3 (52-177)||(51474753-51474878)
chr3 (64-180)||(51473426-51473542)
chr3 (50-176)||(25420558-25420684)
chr3 (18-175)||(41047083-41047239)
chr3 (37-177)||(37220558-37220698)
chr3 (52-177)||(45965939-45966064)
chr3 (45-159)||(18010157-18010271)
chr3 (92-177)||(37222030-37222115)
chr3 (51-177)||(25419145-25419273)
chr3 (2-179)||(37075685-37075864)
chr3 (1-177)||(49407797-49407972)
chr3 (2-177)||(27200062-27200236)
chr3 (36-173)||(23227267-23227398)
chr3 (51-175)||(32695706-32695830)
chr3 (2-177)||(55192119-55192293)
chr3 (2-177)||(50900898-50901072)
chr3 (2-176)||(36701466-36701640)
chr3 (103-177)||(52375802-52375876)
chr3 (2-62)||(29801532-29801592)
chr3 (103-177)||(330307-330381)
chr3 (125-175)||(22370599-22370649)
chr3 (103-177)||(40275094-40275168)
chr3 (2-177)||(51827958-51828133)
chr3 (103-176)||(52237288-52237361)
[»] chr2 (47 HSPs)
chr2 (4-175)||(11090524-11090695)
chr2 (2-177)||(239354-239528)
chr2 (2-177)||(40027141-40027316)
chr2 (2-175)||(40815714-40815887)
chr2 (2-177)||(18451200-18451375)
chr2 (2-177)||(22374321-22374496)
chr2 (5-175)||(14432145-14432315)
chr2 (2-177)||(1978109-1978284)
chr2 (2-177)||(43058334-43058509)
chr2 (2-172)||(3025472-3025641)
chr2 (4-177)||(28616614-28616788)
chr2 (2-177)||(26538098-26538273)
chr2 (9-175)||(8425736-8425902)
chr2 (9-177)||(26538454-26538623)
chr2 (37-177)||(20444750-20444890)
chr2 (4-177)||(7446343-7446519)
chr2 (18-177)||(7446730-7446890)
chr2 (18-177)||(18450831-18450991)
chr2 (18-177)||(22374709-22374869)
chr2 (18-176)||(40815347-40815506)
chr2 (37-177)||(35781067-35781207)
chr2 (52-175)||(40027559-40027682)
chr2 (53-177)||(20440451-20440575)
chr2 (37-177)||(35779709-35779849)
chr2 (63-177)||(11090950-11091064)
chr2 (52-177)||(1978528-1978653)
chr2 (52-177)||(28617033-28617158)
chr2 (18-177)||(239736-239896)
chr2 (61-177)||(28847123-28847239)
chr2 (18-177)||(43058717-43058876)
chr2 (37-176)||(8972239-8972378)
chr2 (36-176)||(15551501-15551641)
chr2 (19-177)||(3025848-3026005)
chr2 (18-176)||(14432525-14432684)
chr2 (19-175)||(8425358-8425514)
chr2 (52-176)||(15552473-15552596)
chr2 (2-177)||(28143400-28143574)
chr2 (20-177)||(31797166-31797322)
chr2 (103-177)||(42192714-42192788)
chr2 (2-177)||(62958-63133)
chr2 (127-177)||(4355756-4355806)
chr2 (103-177)||(6949915-6949989)
chr2 (103-177)||(38007951-38008025)
chr2 (103-177)||(42192241-42192315)
chr2 (103-177)||(43216180-43216254)
chr2 (37-168)||(2190480-2190612)
chr2 (125-177)||(25336093-25336145)
[»] chr8 (33 HSPs)
chr8 (2-177)||(19176659-19176834)
chr8 (2-177)||(9930026-9930201)
chr8 (2-177)||(12571864-12572040)
chr8 (5-177)||(41681135-41681306)
chr8 (4-177)||(11656456-11656630)
chr8 (2-175)||(33328161-33328334)
chr8 (2-174)||(13224645-13224816)
chr8 (2-177)||(44831614-44831789)
chr8 (2-177)||(31133221-31133396)
chr8 (2-177)||(9178005-9178179)
chr8 (18-177)||(13225023-13225183)
chr8 (26-177)||(19176291-19176443)
chr8 (19-178)||(31133605-31133765)
chr8 (61-177)||(41681562-41681678)
chr8 (18-177)||(44831248-44831408)
chr8 (27-177)||(34540941-34541092)
chr8 (61-175)||(9928912-9929026)
chr8 (52-177)||(11656876-11657001)
chr8 (2-175)||(4630161-4630328)
chr8 (18-177)||(33742923-33743082)
chr8 (52-175)||(12572270-12572393)
chr8 (18-176)||(33328524-33328683)
chr8 (4-131)||(33743290-33743417)
chr8 (52-177)||(4629798-4629923)
chr8 (70-177)||(11336959-11337066)
chr8 (40-175)||(10918129-10918264)
chr8 (37-177)||(8073956-8074095)
chr8 (37-99)||(43958264-43958326)
chr8 (145-177)||(9177668-9177700)
chr8 (103-179)||(28254897-28254973)
chr8 (138-177)||(10919691-10919730)
chr8 (103-177)||(15255854-15255928)
chr8 (128-177)||(35427308-35427357)
[»] scaffold0951 (2 HSPs)
scaffold0951 (4-177)||(1668-1841)
scaffold0951 (18-177)||(2051-2211)
[»] scaffold0273 (2 HSPs)
scaffold0273 (2-177)||(4576-4751)
scaffold0273 (18-139)||(4242-4364)
[»] chr4 (70 HSPs)
chr4 (2-176)||(33109686-33109860)
chr4 (2-176)||(46193774-46193948)
chr4 (2-177)||(11153516-11153691)
chr4 (2-176)||(4219559-4219733)
chr4 (8-177)||(25447611-25447780)
chr4 (2-177)||(12234330-12234505)
chr4 (2-177)||(15523603-15523778)
chr4 (2-177)||(25937671-25937846)
chr4 (9-176)||(38962195-38962362)
chr4 (2-176)||(23494445-23494619)
chr4 (2-175)||(22434547-22434718)
chr4 (2-175)||(54995437-54995609)
chr4 (2-177)||(22170306-22170480)
chr4 (2-177)||(48526197-48526371)
chr4 (2-177)||(51020798-51020973)
chr4 (2-175)||(45082435-45082606)
chr4 (2-175)||(2118665-2118837)
chr4 (16-177)||(46193406-46193568)
chr4 (18-177)||(22434180-22434340)
chr4 (26-177)||(25447248-25447400)
chr4 (18-177)||(45082808-45082968)
chr4 (19-177)||(15523236-15523395)
chr4 (62-177)||(23494872-23494987)
chr4 (52-177)||(12234748-12234873)
chr4 (18-177)||(11153147-11153307)
chr4 (18-177)||(20470895-20471055)
chr4 (52-175)||(54995072-54995195)
chr4 (18-175)||(4219943-4220101)
chr4 (18-175)||(48526565-48526723)
chr4 (52-177)||(25938090-25938215)
chr4 (52-177)||(33109883-33110008)
chr4 (52-176)||(2118295-2118419)
chr4 (2-110)||(12503805-12503913)
chr4 (52-175)||(18751602-18751725)
chr4 (28-177)||(51021190-51021339)
chr4 (36-177)||(20958264-20958403)
chr4 (64-176)||(18763951-18764063)
chr4 (37-177)||(44892552-44892692)
chr4 (61-177)||(35363028-35363145)
chr4 (40-160)||(43281198-43281317)
chr4 (37-177)||(48293595-48293735)
chr4 (37-160)||(43243685-43243807)
chr4 (37-180)||(44890515-44890658)
chr4 (36-175)||(48713749-48713888)
chr4 (40-171)||(20957196-20957327)
chr4 (50-175)||(16690939-16691064)
chr4 (18-161)||(12503453-12503597)
chr4 (50-177)||(48708296-48708423)
chr4 (52-177)||(10258306-10258431)
chr4 (37-177)||(48294946-48295087)
chr4 (50-177)||(16691489-16691615)
chr4 (108-177)||(16318251-16318320)
chr4 (2-177)||(17503975-17504149)
chr4 (37-120)||(43242328-43242411)
chr4 (2-69)||(18751971-18752038)
chr4 (70-177)||(55189529-55189636)
chr4 (51-177)||(30597939-30598064)
chr4 (37-117)||(44220781-44220861)
chr4 (2-42)||(17504329-17504369)
chr4 (2-42)||(35193443-35193483)
chr4 (52-179)||(23986519-23986646)
chr4 (103-177)||(55677429-55677503)
chr4 (59-176)||(24336190-24336307)
chr4 (40-175)||(55191181-55191318)
chr4 (125-176)||(44219377-44219428)
chr4 (85-175)||(229164-229254)
chr4 (103-177)||(46737126-46737200)
chr4 (103-176)||(34789854-34789927)
chr4 (2-35)||(40160236-40160269)
chr4 (103-176)||(54440573-54440646)
[»] scaffold0019 (1 HSPs)
scaffold0019 (2-177)||(134042-134217)
[»] scaffold0007 (4 HSPs)
scaffold0007 (2-177)||(64303-64478)
scaffold0007 (63-175)||(64735-64847)
scaffold0007 (2-176)||(205738-205911)
scaffold0007 (81-177)||(210786-210882)
[»] scaffold1223 (2 HSPs)
scaffold1223 (2-176)||(755-928)
scaffold1223 (52-177)||(1160-1285)
[»] scaffold0432 (2 HSPs)
scaffold0432 (2-175)||(10242-10414)
scaffold0432 (71-175)||(9935-10039)
[»] scaffold0027 (2 HSPs)
scaffold0027 (2-177)||(42528-42702)
scaffold0027 (9-175)||(42172-42339)
[»] scaffold0417 (2 HSPs)
scaffold0417 (2-159)||(10640-10797)
scaffold0417 (52-177)||(11042-11167)
[»] scaffold0176 (2 HSPs)
scaffold0176 (11-177)||(18836-19001)
scaffold0176 (81-177)||(19069-19165)
[»] scaffold0113 (1 HSPs)
scaffold0113 (52-174)||(28662-28784)
[»] scaffold0157 (2 HSPs)
scaffold0157 (2-110)||(16564-16672)
scaffold0157 (18-161)||(16880-17024)
[»] scaffold1585 (1 HSPs)
scaffold1585 (36-178)||(567-709)
[»] scaffold0057 (2 HSPs)
scaffold0057 (37-175)||(61862-62000)
scaffold0057 (104-177)||(61029-61102)
[»] scaffold1696 (1 HSPs)
scaffold1696 (37-174)||(454-589)
[»] scaffold0076 (1 HSPs)
scaffold0076 (75-175)||(8451-8551)
[»] scaffold0168 (1 HSPs)
scaffold0168 (36-129)||(7691-7784)


Alignment Details
Target: chr5 (Bit Score: 180; Significance: 5e-97; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 180; E-Value: 5e-97
Query Start/End: Original strand, 260 - 439
Target Start/End: Complemental strand, 28211435 - 28211256
Alignment:
Q  260 tttaaggttgatgacaagtaccaatactcaagtgagaacataaaccttaaggttcatggatggataagtgcagagtctgaaacaattccagcaacaggtt 359  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28211435 tttaaggttgatgacaagtaccaatactcaagtgagaacataaaccttaaggttcatggatggataagtgcagagtctgaaacaattccagcaacaggtt 28211336  T
Q  360 tttgggtaatcatacctagcaatgaatttcgatcaggtggtcttgttaaacagaatcttacctcccatgttggccccatc 439  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28211335 tttgggtaatcatacctagcaatgaatttcgatcaggtggtcttgttaaacagaatcttacctcccatgttggccccatc 28211256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 2 - 177
Target Start/End: Complemental strand, 19359312 - 19359137
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    ||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19359312 agcatagggggtaggtctagaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 19359213  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  19359212 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacaagaggaccaaaagtgtaattaagc 19359137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 2 - 177
Target Start/End: Original strand, 2865124 - 2865299
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  2865124 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgaaacaaaaatgataattgaaggacc 2865223  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2865224 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 2865299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 2 - 177
Target Start/End: Original strand, 18183338 - 18183513
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    ||||||||||||||||||||||| || |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  18183338 agcatagggggtaggtctaaaactgttatttctctgcgtttttggagaataaaatgaggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 18183437  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18183438 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 18183513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 2 - 177
Target Start/End: Original strand, 5819298 - 5819473
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    |||||||||||||| |||||||| ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  5819298 agcatagggggtagatctaaaactgtcatttctttgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 5819397  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5819398 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 5819473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 2 - 177
Target Start/End: Complemental strand, 8647614 - 8647439
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    ||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8647614 agcatagagggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 8647515  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
     ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8647514 attttgttctgttttaaaacggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 8647439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 2 - 177
Target Start/End: Original strand, 24362205 - 24362380
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    |||||||||| || ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  24362205 agcataggggataagtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggacc 24362304  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  24362305 gttttattctgttttaaaagggcaggaccagtttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaagc 24362380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 2 - 177
Target Start/End: Complemental strand, 8461106 - 8460931
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    ||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  8461106 agcatagggggtaggtctaaaactgtcatttctctgcatttttggagaataaaatggggggtatgacgaaaaatgcaacaaaaatgataattgaatgacc 8461007  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||    
T  8461006 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaatacgatgaccaaaagtggaattaagc 8460931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 2 - 177
Target Start/End: Complemental strand, 15709146 - 15708972
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  15709146 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggg-taggacgaaatatgcaacaaaaatgataattgaaggacc 15709048  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||||| |||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  15709047 gttttgttctgttttaaaagggcataaccagtttcgtgagtaggccaaaacactaggaccaaaagtgtaattaagc 15708972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 2 - 177
Target Start/End: Original strand, 29455111 - 29455286
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    |||||| | |||| ||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29455111 agcatatgaggtatgtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 29455210  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
     ||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  29455211 attttgttctgttttaaaagggcaggaccagtttcgtgagtagaccaaaacacgaggaccaaaggtgtaattaagc 29455286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 6 - 177
Target Start/End: Original strand, 14215616 - 14215787
Alignment:
Q  6 tagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttt 105  Q
    ||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||    
T  14215616 tagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatgggggttaagacgaaaaatgcaacaaaaatgatacttgaaggaccgttt 14215715  T
Q  106 tgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||| |||||||||||    
T  14215716 tgttctgttttaaaagggcaggatcagtttcgtgagtaggtcaaaacacgaggaccaaaattgtaattaagc 14215787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 2 - 175
Target Start/End: Original strand, 15372242 - 15372415
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    |||||| | |||||||||||||| ||||||||||||||||||| || |||||||||||  |||| || ||||||||||||||||||||| ||||||||||    
T  15372242 agcataagaggtaggtctaaaactgtcatttctctgcgtttttggaaaataaaatgggatgtagaacaaaaaatgcaacaaaaatgatacttgaaggacc 15372341  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 175  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15372342 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 15372415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 2 - 177
Target Start/End: Original strand, 164560 - 164735
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    ||||||||||||||||||||||| ||||||||||| | ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  164560 agcatagggggtaggtctaaaactgtcatttctctacatttttggagaataaaatggggggtaggacaaaaaatgcaacaaaaatgataattgaaggacc 164659  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||||| ||||||||||||| ||||||||| |||||| |||||||||| ||||| ||||| | |||||||||    
T  164660 gttttgttctgttttaaaagggcaagaccagtttagtgagttggccaaaacatgaggatcaaaattataattaagc 164735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 13 - 177
Target Start/End: Original strand, 14463901 - 14464064
Alignment:
Q  13 taggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttcta 112  Q
    |||||||||||| ||||||||||||||||||| ||||||||||| |||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  14463901 taggtctaaaactgtcatttctctgcgtttttggagaataaaattgggg-taggacgaaaaatgcaataaaaatgataattgaaggatcgttttgttcta 14463999  T
Q  113 ttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||||| ||  |  |||||||||||||||||||||||||||||| ||||||||||||||||    
T  14464000 ttttaaaaggacaaaattagtttcgtgagtaggccaaaacacgaggactaaaagtgtaattaagc 14464064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 18 - 175
Target Start/End: Complemental strand, 5819090 - 5818932
Alignment:
Q  18 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttt 116  Q
    ||||||| ||||||||||||||||| | |||  | ||||| || |||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  5819090 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaagacgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 5818991  T
Q  117 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 175  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5818990 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 5818932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 18 - 175
Target Start/End: Complemental strand, 18183131 - 18182973
Alignment:
Q  18 ctaaaacggtcatttctctgcgttttttgagaataaaa-tggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttt 116  Q
    ||||||| ||||||||||||||||| | | | |||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18183131 ctaaaactgtcatttctctgcgtttctggggtataaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 18183032  T
Q  117 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 175  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  18183031 aaaagggcatgaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaattaa 18182973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 52 - 177
Target Start/End: Original strand, 19359555 - 19359680
Alignment:
Q  52 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaa 151  Q
    ||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  19359555 aaaataggaggtaggacgaaaaatccaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaa 19359654  T
Q  152 cacgaggaccaaaagtgtaattaagc 177  Q
    ||||||||||||||||||||||||||    
T  19359655 cacgaggaccaaaagtgtaattaagc 19359680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 8647822 - 8647982
Alignment:
Q  18 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttt 116  Q
    ||||||| ||||||||||||||||| | |||  | ||||| |  |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  8647822 ctaaaactgtcatttctctgcgtttatggagtttgaaaatagaaggtatgacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 8647921  T
Q  117 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  8647922 aaaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 8647982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 2 - 177
Target Start/End: Complemental strand, 16018763 - 16018590
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    ||||||||||||||||||||||| ||||||| |||   ||||| |||||||||||||||| ||||||| ||||||||| |||||| ||||||||||||||    
T  16018763 agcatagggggtaggtctaaaactgtcatttttctatatttttggagaataaaatggggg-taggacggaaaatgcaataaaaat-ataattgaaggacc 16018666  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||||||||||||||||||| || || |||||||| ||||||||||||||| ||||||||||||||||||||    
T  16018665 gttttgttctattttaaaagggcatgatcaatttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagc 16018590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 2 - 176
Target Start/End: Original strand, 24331929 - 24332107
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacg-aaaaatgcaac-aaaaatgataattgaagga 99  Q
    |||||||||| |||||||||||| ||||||||||||||||||| ||||||| |||||||||||||||| ||||||||||| |||||||||||||| ||||    
T  24331929 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaatagaatggggggtaggacgaaaaaatgcaacaaaaaatgataattgcagga 24332028  T
Q  100 ccgttttgttctatttt-aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacc-aaaagtgtaattaag 176  Q
    |||||||||||| |||| |||| ||||||| |||||||||||||| ||||||||| || |||| |||||||||||||||    
T  24332029 ccgttttgttctgttttaaaaaaggcaggatcagtttcgtgagtatgccaaaacatgatgaccaaaaagtgtaattaag 24332107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 18 - 172
Target Start/End: Complemental strand, 24361997 - 24361843
Alignment:
Q  18 ctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttta 117  Q
    |||||||  |||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||    
T  24361997 ctaaaactatcatttctctgcgtttgtggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccattttgttctgtttta 24361898  T
Q  118 aaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 172  Q
     ||||||| || |||||||||| ||||||||||||| | ||||||||||||||||    
T  24361897 caagggcatgatcagtttcgtgggtaggccaaaacatggggaccaaaagtgtaat 24361843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 26 - 177
Target Start/End: Original strand, 8461323 - 8461475
Alignment:
Q  26 gtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggc 124  Q
    ||||||||||||||||| | |||  | ||||| || |||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| ||    
T  8461323 gtcatttctctgcgtttctggagtttgaaaataggaggtatgacgaaaaatgcagcaaaaatgataattgaaggaccgttttgttctgttttaaaagagc 8461422  T
Q  125 aggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  8461423 aggaacagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 8461475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 18 - 176
Target Start/End: Complemental strand, 2864915 - 2864756
Alignment:
Q  18 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttt 116  Q
    ||||||| ||||||||||||||||| | |||  | ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||    
T  2864915 ctaaaactgtcatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 2864816  T
Q  117 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 176  Q
    ||||||||| || || |||||||||||||||||||||| |||||||||||||||||||||    
T  2864815 aaaagggcatgatcaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaag 2864756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 18 - 172
Target Start/End: Complemental strand, 24325372 - 24325218
Alignment:
Q  18 ctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttta 117  Q
    |||||||  |||||||||||||||| | |||||||||||||||||||||||||||||||| |||||||||||| |||||||||| ||||||||| |||||    
T  24325372 ctaaaactatcatttctctgcgtttgtggagaataaaatggggggtaggacgaaaaatgcgacaaaaatgatacttgaaggaccattttgttctgtttta 24325273  T
Q  118 aaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 172  Q
     ||||||| || |||||||||| ||||||||||||| | ||||||||||||||||    
T  24325272 caagggcatgatcagtttcgtgggtaggccaaaacatggggaccaaaagtgtaat 24325218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 18 - 176
Target Start/End: Complemental strand, 14215402 - 14215243
Alignment:
Q  18 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttt 116  Q
    ||||||| ||||||||||||||||| | |||  | ||||| || ||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||    
T  14215402 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataactgaaggacctttttgttctgtttt 14215303  T
Q  117 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 176  Q
    ||||||| |  |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  14215302 aaaagggtataaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaag 14215243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 26 - 177
Target Start/End: Complemental strand, 164343 - 164192
Alignment:
Q  26 gtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggc 124  Q
    ||||||||||||||||| | |||  | ||||| || |||||||||||||||||||||||| ||||||||||| |||||||||||| | || |||||||||    
T  164343 gtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaa-tgataattgaatgaccgttttgttttgttataaaagggc 164245  T
Q  125 aggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  164244 aggaccagtttcgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagc 164192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 16 - 175
Target Start/End: Original strand, 16018969 - 16019129
Alignment:
Q  16 gtctaaaacggtcatttctctgcgttttttgagaataaaa-tggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatt 114  Q
    ||||||||| ||||||||||||||||| | |||  ||||| | || ||||||||||||||| ||||||||||||||||||||| ||| |||| |||||||    
T  16018969 gtctaaaactgtcatttctctgcgtttctggagtttaaaaataggaggtaggacgaaaaatacaacaaaaatgataattgaagaaccattttattctatt 16019068  T
Q  115 ttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 175  Q
    ||||||| ||||||||| ||||||||||| ||||||||| |||||||||||||||||||||    
T  16019069 ttaaaagagcaggaccaatttcgtgagtatgccaaaacatgaggaccaaaagtgtaattaa 16019129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 18 - 177
Target Start/End: Complemental strand, 24331722 - 24331560
Alignment:
Q  18 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaat--gataattgaaggaccgttttgttctatt 114  Q
    ||||||| ||||||||||||||||| | |||  | ||||| || | ||||| |||||||||||||||||   ||||||||||||||||||||||||| ||    
T  24331722 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggagctaggatgaaaaatgcaacaaaaaatagataattgaaggaccgttttgttctgtt 24331623  T
Q  115 ttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  24331622 ttaaaagggcaggaccagtttcgtgagtagatcaaaacacgaggaccaaaagtgtaattaagc 24331560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 2 - 156
Target Start/End: Complemental strand, 25000266 - 25000112
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    |||||| | ||||| |||||||| ||||||||||| ||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||    
T  25000266 agcatatgaggtagatctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacaaaaaatgcaataaaaatgataattaaaggacc 25000167  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacga 156  Q
     |||| |||| |||||| |||||| |||||  |||||||||||||||||||||||    
T  25000166 attttattctgttttaacagggcatgaccaaattcgtgagtaggccaaaacacga 25000112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 16 - 177
Target Start/End: Original strand, 25000471 - 25000633
Alignment:
Q  16 gtctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatt 114  Q
    ||||||||| ||||||||||||||||||| |||  | ||||| || ||| |||||||||||||||||||||||||||||||| |||| ||||||||| ||    
T  25000471 gtctaaaactgtcatttctctgcgtttttggagtttgaaaataggaggtgggacgaaaaatgcaacaaaaatgataattgaatgaccattttgttctgtt 25000570  T
Q  115 ttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||  || ||||| ||||||||||||||||||||| || ||||||||||||||||||||    
T  25000571 ttaaaagaacatgaccaatttcgtgagtaggccaaaacatgaagaccaaaagtgtaattaagc 25000633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 36 - 177
Target Start/End: Original strand, 7349420 - 7349561
Alignment:
Q  36 tgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagttt 135  Q
    ||||||||| ||| | |||||||||||||||| ||||| ||||||||||||||||| |||||||  |||||||| | ||||||||| ||||||||| |||    
T  7349420 tgcgtttttggaggaaaaaatggggggtaggatgaaaagtgcaacaaaaatgataactgaaggatagttttgttttgttttaaaagagcaggaccaattt 7349519  T
Q  136 cgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    ||||||||| ||||||||||||||||||||||||||||||||    
T  7349520 cgtgagtagaccaaaacacgaggaccaaaagtgtaattaagc 7349561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 18 - 177
Target Start/End: Complemental strand, 29454901 - 29454741
Alignment:
Q  18 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttt 116  Q
    |||||||  |||||||||||||||| | |||  | ||||| || |||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||    
T  29454901 ctaaaactatcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcagcaaaaatgataattcaaggaccgttttgttctgtttt 29454802  T
Q  117 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    ||||||||| ||||| |||||||||||||||||||||| | ||||||||||| ||||||||    
T  29454801 aaaagggcatgaccaatttcgtgagtaggccaaaacacaatgaccaaaagtgaaattaagc 29454741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 58 - 177
Target Start/End: Original strand, 4222147 - 4222266
Alignment:
Q  58 gggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgag 157  Q
    |||||||||||||||||||||| ||||||||||| |||| |||  ||||||||| ||||||||||||| ||||| ||||||||| || ||||||||||||    
T  4222147 gggggtaggacgaaaaatgcaataaaaatgataactgaatgacaattttgttctgttttaaaagggcatgaccattttcgtgagaagcccaaaacacgag 4222246  T
Q  158 gaccaaaagtgtaattaagc 177  Q
    ||||||||||||||||||||    
T  4222247 gaccaaaagtgtaattaagc 4222266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 65 - 176
Target Start/End: Complemental strand, 15371983 - 15371873
Alignment:
Q  65 ggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaa 164  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||  ||||||||||| |||||| ||||||| ||||    
T  15371983 ggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttttaaaagggcaggacca-attcgtgagtagaccaaaatacgaggatcaaa 15371885  T
Q  165 agtgtaattaag 176  Q
    ||||||||||||    
T  15371884 agtgtaattaag 15371873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 52 - 177
Target Start/End: Complemental strand, 7348685 - 7348560
Alignment:
Q  52 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaa 151  Q
    |||||||||||||||||||||| |||||||||||||||||  ||||||  |||||||||| ||||||||||||| ||||| |||||||||||| | ||||    
T  7348685 aaaatggggggtaggacgaaaagtgcaacaaaaatgataaccgaaggaaagttttgttctgttttaaaagggcacgaccaatttcgtgagtagactaaaa 7348586  T
Q  152 cacgaggaccaaaagtgtaattaagc 177  Q
    || ||||||||||| |||||||||||    
T  7348585 catgaggaccaaaaatgtaattaagc 7348560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 15709353 - 15709512
Alignment:
Q  18 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttt 116  Q
    ||||||| |||||||||||||| || | |||  | ||||| || ||||||||||||||||||||| ||||||||| | ||||||||||||||||| ||||    
T  15709353 ctaaaactgtcatttctctgcgcttatggagtttgaaaataggaggtaggacgaaaaatgcaacagaaatgataactaaaggaccgttttgttctgtttt 15709452  T
Q  117 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
     |||||||| ||| |||||| ||||||||||||||||| | ||||||||||||||||||||    
T  15709453 -aaagggcatgactagtttcatgagtaggccaaaacacaatgaccaaaagtgtaattaagc 15709512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 38 - 177
Target Start/End: Complemental strand, 4623286 - 4623149
Alignment:
Q  38 cgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcg 137  Q
    ||||||| ||| |||||||||||  ||||||| ||||||| | ||||||||||||||||||||  ||||||||| |||||||  |||||||||| |||||    
T  4623286 cgtttttggaggataaaatgggg--taggacggaaaatgccataaaaatgataattgaaggacaattttgttctgttttaaagaggcaggaccaatttcg 4623189  T
Q  138 tgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||| | |||||||||| ||||||||||||||||||||    
T  4623188 tgagtaagtcaaaacacgatgaccaaaagtgtaattaagc 4623149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 40 - 177
Target Start/End: Complemental strand, 4219800 - 4219664
Alignment:
Q  40 ttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtg 139  Q
    ||||| ||| |||||||||||| ||||||||||||||||||||||||||||| | ||||||   |||||||| |||||||| |||| ||||| ||| ||     
T  4219800 tttttggaggataaaatggggg-taggacgaaaaatgcaacaaaaatgataactaaaggacaactttgttctgttttaaaaaggcatgaccatttttgta 4219702  T
Q  140 agtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    | ||| |||||||||||||| |||||||||||||||||    
T  4219701 aatagcccaaaacacgaggatcaaaagtgtaattaagc 4219664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 40 - 172
Target Start/End: Original strand, 6019177 - 6019309
Alignment:
Q  40 ttttttgagaataaaatggggggtaggacgaaaa-atgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgt 138  Q
    ||||| ||| |||||||||| ||||||||||||| |||||||||||||||||||| || ||| |||||||||| ||||||||| ||| || |||||||||    
T  6019177 tttttggaggataaaatgggaggtaggacgaaaaaatgcaacaaaaatgataattaaaagacagttttgttctgttttaaaagagcaagatcagtttcgt 6019276  T
Q  139 gagtaggccaaaacacgaggaccaaaagtgtaat 172  Q
    ||||| ||||||||| || |||||||| ||||||    
T  6019277 gagta-gccaaaacatgatgaccaaaaatgtaat 6019309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 60 - 180
Target Start/End: Complemental strand, 6018431 - 6018312
Alignment:
Q  60 gggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgagga 159  Q
    ||||||||| |||| ||||||||||||||||||||||| |   ||||||||| |||||||||| || ||||||||||||||||||  ||||||||||| |    
T  6018431 gggtaggactaaaactgcaacaaaaatgataattgaag-ataattttgttctgttttaaaaggacatgaccagtttcgtgagtagaacaaaacacgagaa 6018333  T
Q  160 ccaaaagtgtaattaagcatt 180  Q
    |||||| ||||||||||||||    
T  6018332 ccaaaaatgtaattaagcatt 6018312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 50 - 165
Target Start/End: Original strand, 4624642 - 4624757
Alignment:
Q  50 ataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaa 149  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| ||  |||||||| | |||||||  | || ||||| |||||||||||||  ||    
T  4624642 ataaaatggggggtaggacgaaaaatgcaacataaatgataattgaatgatagttttgttatgttttaaagagacatgaccaatttcgtgagtaggttaa 4624741  T
Q  150 aacacgaggaccaaaa 165  Q
    ||||||||||| ||||    
T  4624742 aacacgaggacgaaaa 4624757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 16 - 177
Target Start/End: Original strand, 41834443 - 41834604
Alignment:
Q  16 gtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaa-atgataattgaaggaccgttttgttctatt 114  Q
    ||||||||| |||||||||||||||||   |||   ||||| || |||||||| |||| ||||| |||| |||||| || | |||| ||||||||| ||     
T  41834443 gtctaaaactgtcatttctctgcgtttcaagagttgaaaataggaggtaggactaaaactgcaaaaaaacatgatagttta-ggacggttttgttcgatc 41834541  T
Q  115 ttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    | |||  |||||||||| |||||||||  || |||||  ||||||||||||||||||||||||    
T  41834542 tgaaagaggcaggaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgtaattaagc 41834604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 13814131 - 13814190
Alignment:
Q  36 tgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaa 96  Q
    ||||||||| ||| ||||||||||| |||||||||||| ||||||||||||||||||||||    
T  13814131 tgcgtttttggaggataaaatgggg-gtaggacgaaaagtgcaacaaaaatgataattgaa 13814190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 52 - 96
Target Start/End: Complemental strand, 14462730 - 14462686
Alignment:
Q  52 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaa 96  Q
    ||||| || ||||||||||||||||||||||||||||||||||||    
T  14462730 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaa 14462686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 177
Target Start/End: Original strand, 15029780 - 15029854
Alignment:
Q  103 ttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||| |||| |||| || | ||||| |||||||||| || |||||   |||||||||||||||||||||||    
T  15029780 ttttgttcgatttaaaaaaggtaagaccattttcgtgagttggtcaaaatgggaggaccaaaagtgtaattaagc 15029854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 177
Target Start/End: Original strand, 22651782 - 22651856
Alignment:
Q  103 ttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||| |||| |||| ||||| |||| |||||||||  || |||||  ||||||| ||||||||||||||||    
T  22651782 ttttgttcgatttgaaaaaggcagaaccattttcgtgagctggtcaaaatgcgaggacaaaaagtgtaattaagc 22651856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 179
Target Start/End: Complemental strand, 10721945 - 10721785
Alignment:
Q  18 ctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttta 117  Q
    ||||||| ||||||||||| ||||| | |||   ||||| || |||||||| |||| ||||| ||| |||||| || | ||||  |||||||| |||| |    
T  10721945 ctaaaactgtcatttctctacgtttctggagttgaaaataggaggtaggactaaaactgcaaaaaacatgatagttta-ggacgattttgttcgatttga 10721847  T
Q  118 aaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcat 179  Q
    ||  | || ||||| |||||||||  || |||||   ||||||||||| |||||||||||||    
T  10721846 aagagacaagaccattttcgtgagctggtcaaaatgtgaggaccaaaaatgtaattaagcat 10721785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 103 - 175
Target Start/End: Complemental strand, 4966891 - 4966819
Alignment:
Q  103 ttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 175  Q
    |||||||| |||| |||  ||||| || | |||||||||| || |||||  ||||||||||||||||||||||    
T  4966891 ttttgttcgatttaaaagaggcagtactattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 4966819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 16752757 - 16752717
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttt 42  Q
    |||||||||||||||||||||||  |||||||| |||||||    
T  16752757 agcatagggggtaggtctaaaactatcatttctttgcgttt 16752717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 160; Significance: 4e-85; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 2 - 177
Target Start/End: Original strand, 50970647 - 50970822
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50970647 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 50970746  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  50970747 gttttgttctgttttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagc 50970822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 2 - 175
Target Start/End: Complemental strand, 15173272 - 15173099
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  15173272 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaagaacc 15173173  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 175  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  15173172 gttttgttcaattttaaaagggcaggactagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 15173099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 2 - 177
Target Start/End: Complemental strand, 18984295 - 18984120
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    |||||||||| ||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18984295 agcataggggttaggtctaaaactatcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 18984196  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  18984195 gttttgttctgttttaaaagggcaggaccagtttcgtgagtagaccaaaacacgaggaccaaaagtgtaattaagc 18984120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 2 - 175
Target Start/End: Original strand, 5962947 - 5963120
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||     
T  5962947 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaagact 5963046  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 175  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  5963047 gttttgttctattttaaaagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 5963120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 9 - 177
Target Start/End: Original strand, 5540194 - 5540362
Alignment:
Q  9 ggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgt 108  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  5540194 ggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttct 5540293  T
Q  109 tctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5540294 tctgttttaaaaggacaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 5540362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 2 - 177
Target Start/End: Complemental strand, 29869796 - 29869621
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  29869796 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggtgtaggacgaaaaatgcaacaaaaataataattgaaggacc 29869697  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||||| ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  29869696 gttttgttctgttttaaaagggcaagaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgtaattaagc 29869621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 2 - 176
Target Start/End: Original strand, 33144288 - 33144462
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    ||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||    
T  33144288 agcatagagggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatatttgaaggtcc 33144387  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 176  Q
     ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33144388 attttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 33144462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 9 - 177
Target Start/End: Original strand, 15646571 - 15646739
Alignment:
Q  9 ggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgt 108  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15646571 ggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaattgggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgt 15646670  T
Q  109 tctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    ||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15646671 tctgttttaaaagggtaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 15646739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 9 - 177
Target Start/End: Complemental strand, 29307122 - 29306954
Alignment:
Q  9 ggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgt 108  Q
    |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29307122 ggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgt 29307023  T
Q  109 tctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    ||| |||||||||| || ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  29307022 tctgttttaaaaggacatgaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagc 29306954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 2 - 177
Target Start/End: Original strand, 21856412 - 21856587
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||    
T  21856412 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggagtaggacgaaaaatgcagcaaaaatgatacttgaaggacc 21856511  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||||| |||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  21856512 gttttgttctgttttaaaaaggcaggatcagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaagc 21856587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 2 - 177
Target Start/End: Original strand, 8678911 - 8679085
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    ||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||| || |||||||||||||||||||||||||||||||||| ||||    
T  8678911 agcatagggggtaggtctaaaactgtcatttctctgcatttttggagaataaaatggagg-taggacgaaaaatgcaacaaaaatgataattgaatgacc 8679009  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
     ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  8679010 tttttgttctgttttaaaagggcaggaccagttccgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 8679085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 2 - 177
Target Start/End: Complemental strand, 9019149 - 9018974
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    |||||||||||||| |||||||   | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  9019149 agcatagggggtagatctaaaaatataatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatagttgaatgacc 9019050  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  9019049 gttttgttctgttttaaaagggcagaaccagtttcgttagtaggccaaaacacgaggaccaaaagtgtaattaagc 9018974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 2 - 177
Target Start/End: Complemental strand, 17433392 - 17433217
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    |||||||||| |||||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  17433392 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgatacttgaaggacc 17433293  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||||| ||||||||||||| |  ||||||| |||||||||||||||| |||||||||||||||||||||||    
T  17433292 gttttgttctgttttaaaagggcatggtcagtttcatgagtaggccaaaacatgaggaccaaaagtgtaattaagc 17433217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 2 - 176
Target Start/End: Complemental strand, 39154195 - 39154021
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    |||||||||| | |||||||||| ||||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  39154195 agcataggggatgggtctaaaactgtcatttctatgcgtttttggagaatagaatggggggtaggacgaaaaatgcaacaaaaatgataattgcaggacc 39154096  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 176  Q
    |||||||||| ||||||||||||| || |||||||||||||| ||||||||| || |||||||||||||||||||    
T  39154095 gttttgttctgttttaaaagggcatgatcagtttcgtgagtatgccaaaacatgatgaccaaaagtgtaattaag 39154021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 4 - 177
Target Start/End: Original strand, 26859431 - 26859603
Alignment:
Q  4 catagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgt 103  Q
    |||||| ||||||||||||||  | |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  26859431 cataggaggtaggtctaaaactattatttctctgcgtttttggagaataaa-tggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgt 26859529  T
Q  104 tttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
     ||||||| ||||||||||||||||  |||||||||||||| |||||||||||||| |||||||||||||||||    
T  26859530 attgttctgttttaaaagggcaggattagtttcgtgagtagcccaaaacacgaggatcaaaagtgtaattaagc 26859603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 9 - 177
Target Start/End: Original strand, 29307317 - 29307486
Alignment:
Q  9 ggggtaggtctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttg 107  Q
    |||||||||||||||| ||||||||||||||||| | |||  | ||||| || |||||||||||||||||||||||||||||||||||||||||||||||    
T  29307317 ggggtaggtctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttg 29307416  T
Q  108 ttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  29307417 ttctgttttaaaagggcaggaccagtttcgtgagtaggtcaaaacacgaggaccaaaagtgcaattaagc 29307486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 61 - 179
Target Start/End: Complemental strand, 8678658 - 8678540
Alignment:
Q  61 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggac 160  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  8678658 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttttgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggac 8678559  T
Q  161 caaaagtgtaattaagcat 179  Q
    |||||||||||||||||||    
T  8678558 caaaagtgtaattaagcat 8678540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 16 - 176
Target Start/End: Original strand, 17433597 - 17433758
Alignment:
Q  16 gtctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatt 114  Q
    ||||||||| ||||||||||||||||| |  ||  | ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  17433597 gtctaaaactgtcatttctctgcgtttctgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtt 17433696  T
Q  115 ttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 176  Q
    ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  17433697 ttaaaagggcatgaccagtttcgtgagtaggccagaacacgaggaccaaaagtgtaattaag 17433758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 29870003 - 29870163
Alignment:
Q  18 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttt 116  Q
    ||||||| ||||||||||||||||| |  ||  | ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  29870003 ctaaaactgtcatttctctgcgtttctaaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 29870102  T
Q  117 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  29870103 aaaatggcaggaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaagc 29870163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 26 - 180
Target Start/End: Original strand, 4636363 - 4636518
Alignment:
Q  26 gtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggc 124  Q
    ||||||||||||||||| | |||  | ||||| || ||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  4636363 gtcatttctctgcgtttctggagtttgaaaataggaggtgggacgaaaaatgcaacaaaaatgataattgaaggatcgttttgttctgttttaaaagggc 4636462  T
Q  125 aggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcatt 180  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4636463 aggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcatt 4636518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 52 - 179
Target Start/End: Complemental strand, 5539942 - 5539815
Alignment:
Q  52 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaa 151  Q
    ||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  5539942 aaaataggaggtaggacgaaaaatacaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaa 5539843  T
Q  152 cacgaggaccaaaagtgtaattaagcat 179  Q
    ||||||||||||||||||||||||||||    
T  5539842 cacgaggaccaaaagtgtaattaagcat 5539815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 20 - 177
Target Start/End: Complemental strand, 50970437 - 50970279
Alignment:
Q  20 aaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaa 118  Q
    ||||| ||||||||||||||||| | |||  | ||||| |  |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||    
T  50970437 aaaactgtcatttctctgcgtttctggagtttgaaaatagaaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgatttaa 50970338  T
Q  119 aagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50970337 aagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 50970279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 52 - 177
Target Start/End: Original strand, 18984538 - 18984663
Alignment:
Q  52 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaa 151  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  18984538 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaa 18984637  T
Q  152 cacgaggaccaaaagtgtaattaagc 177  Q
    ||| ||||||||||||||||||||||    
T  18984638 cacaaggaccaaaagtgtaattaagc 18984663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 18 - 170
Target Start/End: Complemental strand, 33144078 - 33143925
Alignment:
Q  18 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttt 116  Q
    ||||||| ||||||||||||||||| | |||  | ||||| || |||||||||||| |||||| ||||||||||||||||||||||||||||||| ||||    
T  33144078 ctaaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggacgaaatatgcaaaaaaaatgataattgaaggaccgttttgttctgtttt 33143979  T
Q  117 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgta 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33143978 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgta 33143925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 15173478 - 15173637
Alignment:
Q  18 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttt 116  Q
    ||||||| ||||||||||||||||| | |||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  15173478 ctaaaactgtcatttctctgcgtttatagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtttt 15173577  T
Q  117 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  15173578 aaaa-ggcaggaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 15173637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 18 - 176
Target Start/End: Complemental strand, 21856203 - 21856044
Alignment:
Q  18 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttt 116  Q
    ||||||| ||||||||||||||||| | |||  | ||||| || | ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  21856203 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggagctaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 21856104  T
Q  117 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 176  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  21856103 aaaagggcaggaccagtttcgtgagtagatcaaaacacgaggaccaaaagtgtaattaag 21856044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 52 - 177
Target Start/End: Original strand, 39154439 - 39154564
Alignment:
Q  52 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaa 151  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||| |||||||||||||||||||||||||||||    
T  39154439 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagagcaggaccagtttcgtgagtaggccaaaa 39154538  T
Q  152 cacgaggaccaaaagtgtaattaagc 177  Q
    ||||||||||||||||||||||||||    
T  39154539 cacgaggaccaaaagtgtaattaagc 39154564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 61 - 177
Target Start/End: Complemental strand, 26859176 - 26859060
Alignment:
Q  61 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggac 160  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||| |||||    
T  26859176 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaatggcaggaccagtttcgttagtaggccaaaacacaaggac 26859077  T
Q  161 caaaagtgtaattaagc 177  Q
    |||||||||||||||||    
T  26859076 caaaagtgtaattaagc 26859060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 9 - 177
Target Start/End: Original strand, 9019338 - 9019507
Alignment:
Q  9 ggggtaggtctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttg 107  Q
    |||| ||||||||||| || |||||||||||||| | | |  | ||||| || |||||||||||||||||||||||||||||||||||| ||||||||||    
T  9019338 ggggcaggtctaaaactgttatttctctgcgtttctggggtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttg 9019437  T
Q  108 ttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||| |||||||| ||||| |||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  9019438 ttctgttttaaaatggcagaaccagttttgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagc 9019507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 61 - 177
Target Start/End: Complemental strand, 15646309 - 15646193
Alignment:
Q  61 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggac 160  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  15646309 ggtaggacgaaaaatgcaacaaaaatgataattgaagtaccattttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggac 15646210  T
Q  161 caaaagtgtaattaagc 177  Q
    ||||||| |||||||||    
T  15646209 caaaagtataattaagc 15646193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 38 - 177
Target Start/End: Complemental strand, 52268430 - 52268291
Alignment:
Q  38 cgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcg 137  Q
    ||||||| ||| | |||||||||||||||||||||| ||||||||||||||||| |||| ||| |||||||||| ||||||||||||||||||| |||||    
T  52268430 cgtttttggaggaaaaaatggggggtaggacgaaaagtgcaacaaaaatgataactgaatgacagttttgttctgttttaaaagggcaggaccaatttcg 52268331  T
Q  138 tgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  52268330 tgagcaggccaaaatacgaggaccaaaagtgtaattaagc 52268291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 52 - 177
Target Start/End: Complemental strand, 5962704 - 5962579
Alignment:
Q  52 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaa 151  Q
    ||||| || ||||| |||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||| ||||||||||||||| ||| ||| ||    
T  5962704 aaaataggaggtagaacgaaaaatgcaacaaaaatgatagttgaaagaccgttttgttctgttttaaaagggccggaccagtttcgtgaatagaccataa 5962605  T
Q  152 cacgaggaccaaaagtgtaattaagc 177  Q
    |||||||||||||| |||||||||||    
T  5962604 cacgaggaccaaaaatgtaattaagc 5962579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 4 - 118
Target Start/End: Complemental strand, 4636146 - 4636033
Alignment:
Q  4 catagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgt 103  Q
    ||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||| || ||||||||||||||||||||| |||||||||||     
T  4636146 catagggggtaggtctaaaactgtcatttctctgcgtttttgaagaataaaatggggggtagaacaaaaaatgcaacaaaaatgatacttgaaggaccg- 4636048  T
Q  104 tttgttctattttaa 118  Q
    |||||||| ||||||    
T  4636047 tttgttctgttttaa 4636033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 62 - 176
Target Start/End: Original strand, 52269177 - 52269291
Alignment:
Q  62 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacc 161  Q
    |||||||||||| ||||||||||||||||| |||| |||  ||||||||| |||||||||||||| |||  |||| |||||| | |||||||||||||||    
T  52269177 gtaggacgaaaagtgcaacaaaaatgataactgaatgacatttttgttctgttttaaaagggcagaaccgatttcatgagtaagtcaaaacacgaggacc 52269276  T
Q  162 aaaagtgtaattaag 176  Q
    |||||||||||||||    
T  52269277 aaaagtgtaattaag 52269291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 92 - 177
Target Start/End: Original strand, 2733416 - 2733501
Alignment:
Q  92 ttgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||| || ||||||||||||| |||||||||||| |||||||||    
T  2733416 ttgaaggaccgttttgttctgttttaaaagggcaggaccaatttcgcgaataggccaaaacacaaggaccaaaagtataattaagc 2733501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 52 - 177
Target Start/End: Complemental strand, 17112407 - 17112283
Alignment:
Q  52 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaa 151  Q
    ||||| || ||||||||||||||||||| ||||||||||||||||||||  |||| |||||||||||||||||   |||| |||| |||||||  |||||    
T  17112407 aaaataggaggtaggacgaaaaatgcaataaaaatgataattgaaggactattttattctattttaaaagggc-ctaccaatttcatgagtagatcaaaa 17112309  T
Q  152 cacgaggaccaaaagtgtaattaagc 177  Q
    || ||| |||||||||||||||||||    
T  17112308 catgagaaccaaaagtgtaattaagc 17112283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 103 - 181
Target Start/End: Complemental strand, 47827039 - 47826961
Alignment:
Q  103 ttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcatta 181  Q
    ||||||| ||||||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  47827039 ttttgttatattttaaaagggcatgaccattttcgtgagtagaccaaaacacgaggaccaaaagtgtaattaagtatta 47826961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 78 - 170
Target Start/End: Original strand, 47827033 - 47827125
Alignment:
Q  78 aacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgta 170  Q
    |||||||||||||||| ||||||  ||||||||| ||||||||||||| ||||| ||||||||||||||||||||| |  || ||||||||||    
T  47827033 aacaaaaatgataattaaaggacaattttgttctgttttaaaagggcatgaccattttcgtgagtaggccaaaacaaggagatcaaaagtgta 47827125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 97 - 177
Target Start/End: Original strand, 50419725 - 50419805
Alignment:
Q  97 ggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||||||||| ||||||||| |||||||||| |||||||||| || | |||  ||| ||||||||||| ||||||||    
T  50419725 ggaccgttttgttcaattttaaaaaggcaggaccaatttcgtgagttggtctaaatgcgatgaccaaaagtgcaattaagc 50419805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 51 - 138
Target Start/End: Complemental strand, 39843280 - 39843193
Alignment:
Q  51 taaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgt 138  Q
    |||||||||||  ||||| |||| ||||| ||| |||||| |  | |||||||||||||| |||| |||| |||||||||||||||||    
T  39843280 taaaatgggggtaaggaccaaaagtgcaaaaaacatgatagtatagggaccgttttgttcgatttgaaaaaggcaggaccagtttcgt 39843193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 38 - 177
Target Start/End: Original strand, 52235074 - 52235213
Alignment:
Q  38 cgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcg 137  Q
    ||||||| |||  ||||||| ||| |||||| |||| ||||| ||| |||||| |  | |||| | || |||| |||| |||||||||||| ||||||||    
T  52235074 cgtttttggagggtaaaatgagggttaggaccaaaattgcaagaaacatgatagtatagggactgcttcgttcgatttgaaaagggcaggatcagtttcg 52235173  T
Q  138 tgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    ||||| ||  ||||   ||||| |||||||||||||||||    
T  52235174 tgagttggttaaaatctgaggatcaaaagtgtaattaagc 52235213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 8 - 177
Target Start/End: Original strand, 17088516 - 17088684
Alignment:
Q  8 gggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttg 107  Q
    ||||||||||||||||| ||||||||||||||||| | ||    ||||| || ||||| || |||| ||||| ||| || ||| || | |||| ||||||    
T  17088516 gggggtaggtctaaaactgtcatttctctgcgtttctagatttgaaaataggaggtagaactaaaactgcaaaaaatat-atagtttagggacggttttg 17088614  T
Q  108 ttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    ||  |||| |||  |||| ||||| |||||||||  |  |||||   |||||||||||||||||||||||    
T  17088615 tttgatttgaaagaggcatgaccattttcgtgagctgttcaaaatgagaggaccaaaagtgtaattaagc 17088684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 50 - 177
Target Start/End: Complemental strand, 52233866 - 52233739
Alignment:
Q  50 ataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaa 149  Q
    |||||||||||| || ||| |||| ||||| ||| |||||| |  | |||| | ||||||| | || ||||||| || |||| |||||| ||| ||  ||    
T  52233866 ataaaatgggggttatgaccaaaattgcaaaaaacatgatagtatagggactgctttgttcgacttgaaaagggtagcaccaatttcgtaagttggttaa 52233767  T
Q  150 aacacgaggaccaaaagtgtaattaagc 177  Q
    ||| ||||||| ||||||||||||||||    
T  52233766 aacccgaggacgaaaagtgtaattaagc 52233739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 177
Target Start/End: Complemental strand, 29439005 - 29438931
Alignment:
Q  103 ttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||| |||| |||  || ||||||| |||||||||| || |||||  | ||||||||||||||||||||||    
T  29439005 ttttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagc 29438931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 52 - 177
Target Start/End: Original strand, 50926661 - 50926786
Alignment:
Q  52 aaaatggggggta-ggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaa 150  Q
    ||||| ||||||| |||| |||| ||||| |||||||||| || | |||| ||||||||| |||| |||  | | |||||| |||||||||  || ||||    
T  50926661 aaaatagggggtaaggactaaaactgcaa-aaaaatgatagtttagggacggttttgttcgatttgaaagagacgggaccattttcgtgagctggtcaaa 50926759  T
Q  151 acacgaggaccaaaagtgtaattaagc 177  Q
    |  ||| ||||||||||||||||||||    
T  50926760 atgcgatgaccaaaagtgtaattaagc 50926786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 176
Target Start/End: Complemental strand, 50304490 - 50304441
Alignment:
Q  127 gaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 176  Q
    ||||| |||||||||| || |||||  |||||||||||||||||||||||    
T  50304490 gaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaag 50304441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 127 - 175
Target Start/End: Original strand, 17641864 - 17641912
Alignment:
Q  127 gaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 175  Q
    ||||| |||||||||| || |||||  ||||||||||||||||||||||    
T  17641864 gaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 17641912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 158; Significance: 7e-84; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 2 - 175
Target Start/End: Complemental strand, 19830596 - 19830423
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19830596 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 19830497  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 175  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  19830496 gttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 19830423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 2 - 177
Target Start/End: Complemental strand, 19590701 - 19590526
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    ||||||||||||||||||||||| |||||||||||| |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  19590701 agcatagggggtaggtctaaaactgtcatttctctgggtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 19590602  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19590601 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 19590526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 2 - 177
Target Start/End: Complemental strand, 37786943 - 37786768
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37786943 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 37786844  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||| | |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  37786843 gttttgttatgttttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagc 37786768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 4 - 177
Target Start/End: Original strand, 32004985 - 32005158
Alignment:
Q  4 catagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgt 103  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  32004985 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggagtaggacgaaaaatgcaacaaaaatgataattaaaggaccgt 32005084  T
Q  104 tttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  32005085 tttgttctattttaaaagggcatgaccagtttcgtgagtatgccaaaacatgaggaccaaaagtgtaattaagc 32005158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 4 - 177
Target Start/End: Original strand, 35289272 - 35289445
Alignment:
Q  4 catagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgt 103  Q
    |||||||||||||||||||||  | |||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  35289272 catagggggtaggtctaaaactattatttctctgcgtttttagagaataaaatggggggtatgacgaaaaatgcaaccaaaatgataattgaaggaccgt 35289371  T
Q  104 tttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  35289372 tttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagc 35289445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 2 - 177
Target Start/End: Complemental strand, 38858819 - 38858644
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    ||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  38858819 agcatagtgggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 38858720  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||    
T  38858719 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagc 38858644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 2 - 175
Target Start/End: Original strand, 29100220 - 29100393
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    ||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  29100220 agcatagggggtaggtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacaaaaaatgcaacaaaaatgataattgaaagacc 29100319  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 175  Q
    |||||||||| ||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||    
T  29100320 gttttgttctgttttaaaagggcaggaccaattttgtgagtagaccaaaacacgaggaccaaaagtgtaattaa 29100393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 4 - 177
Target Start/End: Original strand, 2659211 - 2659384
Alignment:
Q  4 catagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgt 103  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  2659211 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaatgaccgt 2659310  T
Q  104 tttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||| ||||||||||||| |||||||||| ||| ||||||||||| |||||||||||| |||||||||||    
T  2659311 tttgttctgttttaaaagggcaagaccagtttcatgaataggccaaaacgcgaggaccaaaattgtaattaagc 2659384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 4 - 177
Target Start/End: Original strand, 34534162 - 34534335
Alignment:
Q  4 catagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgt 103  Q
    |||||| |||||||||||||| ||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34534162 cataggtggtaggtctaaaactgtcatttctctgtttttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgt 34534261  T
Q  104 tttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||| ||||||| |||||||| |||||||||||||||||||||||||||| ||||||||| |||||||||    
T  34534262 tttgttctgttttaaatgggcaggatcagtttcgtgagtaggccaaaacacgagaaccaaaagtataattaagc 34534335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 2 - 175
Target Start/End: Complemental strand, 4641616 - 4641443
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    ||||||||||| |||||||||||  |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  4641616 agcatagggggcaggtctaaaactatcatttctctgcatttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 4641517  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 175  Q
    |||||||| | ||| ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  4641516 gttttgttatgtttcaaaagagcaggaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaa 4641443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 9 - 172
Target Start/End: Original strand, 23953105 - 23953268
Alignment:
Q  9 ggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgt 108  Q
    |||||| ||||||||| || |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  23953105 ggggtatgtctaaaactgttatttctctgcgtttttggagaataaaatggggggtatgacgaaaaatgcaacaaaaatgataattgaaggaccgttttgt 23953204  T
Q  109 tctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 172  Q
    ||| |||| ||||||| |||||||||||||||||||  ||||||||||||||||||| ||||||    
T  23953205 tctgttttgaaagggcgggaccagtttcgtgagtagatcaaaacacgaggaccaaaaatgtaat 23953268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 19590909 - 19591069
Alignment:
Q  18 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttt 116  Q
    ||||||| ||||||||||||||||| | |||  | ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  19590909 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 19591008  T
Q  117 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  19591009 aaaagggcaggaccagtttcgtgagtaggccaaaacacgagtaccaaaagtgtaattaagc 19591069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 9 - 175
Target Start/End: Original strand, 4478076 - 4478242
Alignment:
Q  9 ggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgt 108  Q
    |||||||||||||||| || |||||||||||||||| |||||||||||| ||| || |||||||||||||||||||||||||||||||||||  | || |    
T  4478076 ggggtaggtctaaaactgttatttctctgcgtttttggagaataaaatgagggataagacgaaaaatgcaacaaaaatgataattgaaggacaatgttat 4478175  T
Q  109 tctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 175  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  4478176 tctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtacttaa 4478242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 18 - 177
Target Start/End: Complemental strand, 2659000 - 2658840
Alignment:
Q  18 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttt 116  Q
    ||||||| | ||||||||||||||||| |||  | ||||| || |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  2659000 ctaaaactgccatttctctgcgtttttggagtttgaaaataggaggtatgacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 2658901  T
Q  117 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  2658900 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacaaaaagtgtaattaagc 2658840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 38859025 - 38859185
Alignment:
Q  18 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttt 116  Q
    |||||||  |||||||||||||||| | |||  | ||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  38859025 ctaaaactatcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatggaaggaccgttttgttctgtttt 38859124  T
Q  117 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  38859125 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 38859185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 19 - 177
Target Start/End: Complemental strand, 32004774 - 32004615
Alignment:
Q  19 taaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttta 117  Q
    |||||| ||||||||||||||||| | |||  | ||||| || |||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  32004774 taaaactgtcatttctctgcgtttctggagtttgaaaataggaggtagggcgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtttta 32004675  T
Q  118 aaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  32004674 aaagggcaggatcaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 32004615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 20 - 177
Target Start/End: Original strand, 37787153 - 37787311
Alignment:
Q  20 aaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaa 118  Q
    ||||| ||||||||||||||||| | |||  | ||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||  |||||    
T  37787153 aaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaagaaccgttttgttctgatttaa 37787252  T
Q  119 aagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  37787253 aagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtataattaagc 37787311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 62 - 177
Target Start/End: Complemental strand, 35289019 - 35288904
Alignment:
Q  62 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacc 161  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  35289019 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaatacgatgacc 35288920  T
Q  162 aaaagtgtaattaagc 177  Q
    ||||||||||||||||    
T  35288919 aaaagtgtaattaagc 35288904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 52 - 165
Target Start/End: Complemental strand, 29099976 - 29099863
Alignment:
Q  52 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaa 151  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  29099976 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggatcagtttcgtgagtaggccaaaa 29099877  T
Q  152 cacgaggaccaaaa 165  Q
    ||||||||||||||    
T  29099876 cacgaggaccaaaa 29099863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 36 - 177
Target Start/End: Complemental strand, 38161093 - 38160952
Alignment:
Q  36 tgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagttt 135  Q
    ||||||||| ||| ||||||||||| ||||||||||||||||||||||||| |||||||||||||  ||||||||| ||||||||||||||||  | |||    
T  38161093 tgcgtttttggaggataaaatggggagtaggacgaaaaatgcaacaaaaataataattgaaggacaattttgttctgttttaaaagggcaggattatttt 38160994  T
Q  136 cgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  38160993 cgtgagtaggccaaaacccgaggaccaaaagtgtaattaagc 38160952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 26 - 177
Target Start/End: Complemental strand, 34533944 - 34533792
Alignment:
Q  26 gtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggc 124  Q
    ||||||||||||||||||| |||  | ||||| || ||||||||| |||||||||||||||||||||||||| |||| |||| |||| ||||||||| ||    
T  34533944 gtcatttctctgcgtttttggagtttgaaaataggaggtaggacggaaaatgcaacaaaaatgataattgaatgaccattttattctgttttaaaagagc 34533845  T
Q  125 aggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34533844 atgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 34533792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 40 - 177
Target Start/End: Complemental strand, 28583577 - 28583440
Alignment:
Q  40 ttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtg 139  Q
    ||||| ||| |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| || | |||||||||||||| |||| | || ||    
T  28583577 tttttggaggataaaatggggggtaggacgaaaaatgcaataaaaatgataattgaaggacagttttattatgttttaaaagggcagaaccaatctcatg 28583478  T
Q  140 agtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    ||||||||||||||||||||||||||||||||||||||    
T  28583477 agtaggccaaaacacgaggaccaaaagtgtaattaagc 28583440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 18 - 175
Target Start/End: Original strand, 4641828 - 4641983
Alignment:
Q  18 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttt 116  Q
    ||||||| ||||||||||||||||| | |||  | ||||| ||  ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  4641828 ctaaaactgtcatttctctgcgtttctagagtttgaaaataggacgtaggacgaaatatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 4641927  T
Q  117 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 175  Q
    |||||| ||||||||||   |||||||||||||||||||||||||||||||||||||||    
T  4641928 aaaaggacaggaccagt---gtgagtaggccaaaacacgaggaccaaaagtgtaattaa 4641983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 19830804 - 19830963
Alignment:
Q  18 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttt 116  Q
    ||||||| |||||||||||| |||| | |||  | ||||| || |||||||| |||||||||||||||||||||||||||| ||||||||||| | ||||    
T  19830804 ctaaaactgtcatttctctgtgtttctggagtttgaaaataggaggtaggac-aaaaatgcaacaaaaatgataattgaagtaccgttttgttatgtttt 19830902  T
Q  117 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  19830903 aaaaggacaggaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 19830963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 61 - 177
Target Start/End: Complemental strand, 23952848 - 23952731
Alignment:
Q  61 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagta-ggccaaaacacgagga 159  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||| || |||||||||||||    
T  23952848 ggtaggacgaaaaatgcaaccaaaatgataattgaaggaccgttttgttctgttttaaaagggcatgaccaatttcgtgagtagggtcaaaacacgagga 23952749  T
Q  160 ccaaaagtgtaattaagc 177  Q
    ||||||||||||||||||    
T  23952748 ccaaaagtgtaattaagc 23952731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 37 - 177
Target Start/End: Original strand, 28584326 - 28584466
Alignment:
Q  37 gcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttc 136  Q
    |||||||| ||| ||||||||||||||| |||||||||| ||||||||||||||||||||||||  ||||||||| |||||||||| || ||||| ||||    
T  28584326 gcgtttttggaggataaaatggggggtaagacgaaaaatacaacaaaaatgataattgaaggacaattttgttctgttttaaaaggacatgaccaatttc 28584425  T
Q  137 gtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||| ||||||||| ||||||||| ||||||||||||||||    
T  28584426 gtgaataggccaaagcacgaggacgaaaagtgtaattaagc 28584466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 178
Target Start/End: Original strand, 35579256 - 35579431
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    ||||||||||||||||||||||| || ||||| |||||||||| |||   ||||| || |||| ||| |||| ||||| ||| |||||| ||  |||||     
T  35579256 agcatagggggtaggtctaaaactgttatttccctgcgtttttagagttgaaaataggaggtatgactaaaactgcaaaaaacatgatagtt-taggacg 35579354  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagca 178  Q
    ||||||||  |||| |||  ||||  | || |||||||||  |  |||||  |||||| ||||||||||||||||||    
T  35579355 gttttgtttgatttgaaagaggcataatcattttcgtgagctgatcaaaatgcgaggatcaaaagtgtaattaagca 35579431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 103 - 177
Target Start/End: Original strand, 39137004 - 39137078
Alignment:
Q  103 ttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||| |||| |||  |||||||||| |||||||||  || ||||| ||||||| |||||||||||||||||    
T  39137004 ttttgttcgatttaaaagaggcaggaccattttcgtgagcgggtcaaaatacgaggatcaaaagtgtaattaagc 39137078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 103 - 177
Target Start/End: Complemental strand, 49064109 - 49064035
Alignment:
Q  103 ttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    ||||||||||||| |||  ||||  |||| |||||||||  || ||||| |||||||||||||||||||||||||    
T  49064109 ttttgttctatttgaaagaggcaataccattttcgtgagctggtcaaaatacgaggaccaaaagtgtaattaagc 49064035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 59 - 176
Target Start/End: Complemental strand, 33880739 - 33880622
Alignment:
Q  59 ggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgagg 158  Q
    |||||||||| |||| ||||| ||| ||||||||| | |||| ||||||||| |||| |||  ||||| || | ||| |||||  || ||||| ||||||    
T  33880739 ggggtaggactaaaagtgcaaaaaatatgataatttagggacggttttgttcgatttgaaagaggcagaacaatttttgtgagctggtcaaaatacgagg 33880640  T
Q  159 accaaaagtgtaattaag 176  Q
    ||||||| || |||||||    
T  33880639 accaaaaatgcaattaag 33880622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 2 - 175
Target Start/End: Complemental strand, 35579074 - 35578902
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    |||||||||| |||||||||||  ||||||||||||||||| | |||   ||||| ||  ||||||  |||| ||||| ||| |||||| ||  | |||     
T  35579074 agcataggggataggtctaaaaatgtcatttctctgcgtttctggagttgaaaataggatgtaggattaaaactgcaaaaaacatgatagtt-tatgacg 35578976  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 175  Q
    ||||||||| |||| |||  |||||||||| ||| |||||  || |||||  | | ||||||||||||||||||    
T  35578975 gttttgttcgatttgaaagtggcaggaccatttttgtgagctggtcaaaatgcaatgaccaaaagtgtaattaa 35578902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 103 - 175
Target Start/End: Original strand, 787257 - 787329
Alignment:
Q  103 ttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 175  Q
    |||||||| |||| |||  || ||||||| |||||||||| || ||||| ||||| |||||||||||||||||    
T  787257 ttttgttcgatttaaaagaggtaggaccattttcgtgagttggtcaaaatacgagcaccaaaagtgtaattaa 787329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 34595158 - 34595317
Alignment:
Q  18 ctaaaacggtcatttctctgcgttttttgagaataaaatg-gggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttt 116  Q
    ||||||| ||||||||| ||||||| | |||   |||||  |||||||| || |||| ||||| ||| |||||| || | ||||  |||||||| ||||     
T  34595158 ctaaaactgtcatttctgtgcgtttctggagttgaaaataagggggtagcactaaaactgcaa-aaacatgatagtttagggacgattttgttcgattta 34595256  T
Q  117 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||   ||||||||| |||||||||| || |||||   |||||||||||||||||||||||    
T  34595257 aaagatgcaggaccattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaagc 34595317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 176
Target Start/End: Complemental strand, 9181708 - 9181534
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatgggggg-taggacgaaaaatgcaacaaaaatgataattgaaggac 100  Q
    |||||||| ||| || ||||||| ||||||||| ||||||| | |||    |||| ||| | |||||| |||| ||||| |||||| ||| || ||||||    
T  9181708 agcataggtggttggactaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaaat-atagtttaaggac 9181610  T
Q  101 cgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 176  Q
      |||||||| |||| |||| |  ||||||| |||||||||| || |||||    |||||||||||||||||||||    
T  9181609 gattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 9181534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 44
Target Start/End: Original strand, 32427397 - 32427432
Alignment:
Q  9 ggggtaggtctaaaacggtcatttctctgcgttttt 44  Q
    |||||||||||||||| |||||||||||||||||||    
T  32427397 ggggtaggtctaaaactgtcatttctctgcgttttt 32427432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 177
Target Start/End: Complemental strand, 27245278 - 27245204
Alignment:
Q  103 ttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||| |||| |||  || ||||||| |||||||||| || |||||  | ||||||||||||||||||||||    
T  27245278 ttttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagc 27245204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 26048439 - 26048491
Alignment:
Q  125 aggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    ||||||| |||||||||| || |||||| | |||| |||||||||||||||||    
T  26048439 aggaccaatttcgtgagttggtcaaaacgcaaggaacaaaagtgtaattaagc 26048491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 103 - 179
Target Start/End: Original strand, 39388739 - 39388815
Alignment:
Q  103 ttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcat 179  Q
    |||||||| |||| |||  || ||||| | |||||||||| || |||||  | ||||||||||||||||||||||||    
T  39388739 ttttgttcgatttaaaagaggtaggacaaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagcat 39388815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 156; Significance: 1e-82; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 2 - 177
Target Start/End: Complemental strand, 4969 - 4794
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    ||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4969 agcatagggggtaggtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 4870  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4869 gttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 4794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 64 - 176
Target Start/End: Original strand, 5222 - 5334
Alignment:
Q  64 aggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaa 163  Q
    |||||||||||||||||||||||||||||||||  |||||||| |||| |||||||||| || |||||||||||||| ||||||||||||||||||||||    
T  5222 aggacgaaaaatgcaacaaaaatgataattgaattaccgttttattctgttttaaaaggacaagaccagtttcgtgactaggccaaaacacgaggaccaa 5321  T
Q  164 aagtgtaattaag 176  Q
    |||||||||||||    
T  5322 aagtgtaattaag 5334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 156; Significance: 1e-82; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 2 - 177
Target Start/End: Original strand, 10900299 - 10900474
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10900299 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 10900398  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  10900399 gttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaagc 10900474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 2 - 177
Target Start/End: Complemental strand, 20741276 - 20741101
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  20741276 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatatttgaaggacc 20741177  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
     ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20741176 attttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 20741101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 2 - 177
Target Start/End: Original strand, 11276951 - 11277126
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  11276951 agcatagggggtaggtctaaaactgtcatttctcttcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaagaacc 11277050  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  11277051 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaagc 11277126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 2 - 177
Target Start/End: Complemental strand, 18257313 - 18257138
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    ||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18257313 agcatagagggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtatgacgaaaaatgcaacaaaaatgataattgaaggacc 18257214  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  18257213 gttttgttctgttttaaaagggcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgtaattaagc 18257138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 2 - 177
Target Start/End: Original strand, 15828010 - 15828185
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    ||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15828010 agcatagggggtaggtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 15828109  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||| | ||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15828110 gttttgttttgttttaaaagggtatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 15828185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 4 - 177
Target Start/End: Original strand, 1149802 - 1149976
Alignment:
Q  4 catagggggtaggtctaaaacggtcatttctctgcgttttttg-agaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccg 102  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  1149802 catagggggtaggtctaaaactgtcatttctctgcgttttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatggtaattgaaggaccg 1149901  T
Q  103 ttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    ||||||||||||||||||||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  1149902 ttttgttctattttaaaagggcatgaccagtttcatgagtaggctaaaacacgaggaccaaaagtgtaattaagc 1149976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 2 - 179
Target Start/End: Original strand, 31470685 - 31470862
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    |||||| ||||||| |||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31470685 agcataaggggtagatctaaaattgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 31470784  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcat 179  Q
    |||||||||| |||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  31470785 gttttgttctgttttaaaagggcagaaccagtttcgtgagtaggctaaaacacaaggaccaaaagtgtaattaagcat 31470862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 2 - 177
Target Start/End: Complemental strand, 11445163 - 11444988
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    ||||||||||||||||||||||| |||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  11445163 agcatagggggtaggtctaaaactgtcatttctctgtgtttttagagaataaaatggagggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 11445064  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
     |||| |||| ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  11445063 attttattctgttttaaaggggcaggaccagcttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 11444988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 4 - 177
Target Start/End: Original strand, 12935528 - 12935701
Alignment:
Q  4 catagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgt 103  Q
    ||||||||||||||||||||| |||||||||||| |||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  12935528 catagggggtaggtctaaaactgtcatttctctgtgtttatggagaataaaatggggggtaggacgaaaaatgtaacaaaaatgataattgaaggaccgt 12935627  T
Q  104 tttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||| ||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  12935628 tttgttctgttttataaaggcaggaccagtttcgtgagtacgccaaaacacgaggaccaaaagtgtaattaagc 12935701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 2 - 177
Target Start/End: Complemental strand, 28472812 - 28472638
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  28472812 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggg-taggacgaaaaatgcaacaaaaatgataattgaatgacc 28472714  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
     ||||||||| |||||||| |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  28472713 attttgttctgttttaaaatggcaggaccactttcgtgagttggccaaaacacgaggaccaaaagtgtaattaagc 28472638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 2 - 177
Target Start/End: Complemental strand, 29860001 - 29859827
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  29860001 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggg-taggacgaaaaatgcaacaaaaatgataattgaatgacc 29859903  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
     ||||||||| |||||||| |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  29859902 attttgttctgttttaaaatggcaggaccactttcgtgagttggccaaaacacgaggaccaaaagtgtaattaagc 29859827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 18 - 177
Target Start/End: Complemental strand, 2319832 - 2319673
Alignment:
Q  18 ctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttta 117  Q
    |||||||  |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  2319832 ctaaaactatcatttctctgcgtttctggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttta 2319733  T
Q  118 aaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  2319732 aaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagc 2319673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 9 - 175
Target Start/End: Complemental strand, 10900109 - 10899942
Alignment:
Q  9 ggggtaggtctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttg 107  Q
    |||||||||||||||| ||||||||||||||||| | |||  | ||||| || |||||||||||||||||||||||||||||||||||||||||||||||    
T  10900109 ggggtaggtctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttg 10900010  T
Q  108 ttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 175  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  10900009 ttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaattaa 10899942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 2 - 177
Target Start/End: Original strand, 18505288 - 18505463
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    |||||||||| ||| | |||||| ||||||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  18505288 agcataggggttagatttaaaactgtcatttctcttcgttgttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggact 18505387  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||| | |||||||||||||||| ||||||||||||||| |||||||||||||||||||||| |||||||||    
T  18505388 gttttgttatgttttaaaagggcaggatcagtttcgtgagtagaccaaaacacgaggaccaaaagtataattaagc 18505463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 2 - 175
Target Start/End: Original strand, 2322588 - 2322760
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    ||||||||||| ||||||||||| |||||||||||| |||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  2322588 agcatagggggaaggtctaaaactgtcatttctctgtgttttg-gagaataaaatgaggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 2322686  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 175  Q
    |||||||||| |||||||| |||| ||| |||||||||||||| ||||||||||| ||||||||||||||||||    
T  2322687 gttttgttctgttttaaaaaggcaagactagtttcgtgagtagaccaaaacacgaagaccaaaagtgtaattaa 2322760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 18 - 177
Target Start/End: Complemental strand, 12935318 - 12935158
Alignment:
Q  18 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttt 116  Q
    ||||||| ||||||||||||||||| | |||  | ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  12935318 ctaaaactgtcatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 12935219  T
Q  117 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12935218 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 12935158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 2 - 177
Target Start/End: Complemental strand, 23074164 - 23074000
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    |||||||  |||||||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||           ||||||||||||||    
T  23074164 agcatagaaggtaggtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatg-----------ataattgaaggacc 23074076  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23074075 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 23074000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 11445371 - 11445531
Alignment:
Q  18 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttt 116  Q
    ||||||| ||||||||||||||||| | |||  | ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  11445371 ctaaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 11445470  T
Q  117 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11445471 aaaaaggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 11445531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 22219737 - 22219897
Alignment:
Q  18 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttt 116  Q
    ||||||| |||||||||||| |||| | |||  | ||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  22219737 ctaaaactgtcatttctctgagtttctggagtttgaaaataggaggtagaacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 22219836  T
Q  117 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22219837 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 22219897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 23075512 - 23075672
Alignment:
Q  18 ctaaaacggtcatttctctgcgttttttgagaataaaa-tggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttt 116  Q
    ||||||| ||||||||||||| ||||| |||  ||||| | || ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  23075512 ctaaaactgtcatttctctgcatttttggagtttaaaaataggaggtagaacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 23075611  T
Q  117 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23075612 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 23075672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 15 - 177
Target Start/End: Complemental strand, 4811535 - 4811373
Alignment:
Q  15 ggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatt 114  Q
    |||||||||| || |||| |||||||||||  |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  4811535 ggtctaaaactgttatttatctgcgtttttgaagaataaaatggggggtaagacgaaaaatgaaacaaaaatgataattgaaggaccgttttattctatt 4811436  T
Q  115 ttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    ||||||||||| |||||||||||||||||| |||||| ||  |||||||||||||||||||||    
T  4811435 ttaaaagggcatgaccagtttcgtgagtagaccaaaatactgggaccaaaagtgtaattaagc 4811373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 52 - 175
Target Start/End: Complemental strand, 18505045 - 18504922
Alignment:
Q  52 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaa 151  Q
    ||||| || |||||||||||||||| |||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  18505045 aaaataggaggtaggacgaaaaatgaaacaaaaatgataattgaagaaccgttttgttctgttttaaaaaggcaggaccagtttcgtgagtaggccaaaa 18504946  T
Q  152 cacgaggaccaaaagtgtaattaa 175  Q
    ||||||||||||||||||||||||    
T  18504945 cacgaggaccaaaagtgtaattaa 18504922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 61 - 177
Target Start/End: Original strand, 18257565 - 18257681
Alignment:
Q  61 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggac 160  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  18257565 ggtaggacgaaaaatgtaacaaaaataataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggtcaaaacacgaggac 18257664  T
Q  161 caaaagtgtaattaagc 177  Q
    ||||||| |||||||||    
T  18257665 caaaagtataattaagc 18257681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 26 - 177
Target Start/End: Original strand, 20741493 - 20741648
Alignment:
Q  26 gtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaa---atgataattgaaggaccgttttgttctattttaaaag 121  Q
    ||||||||||||||||| | |||  | ||||| || ||||||||||||||||||| ||||   ||||||||||||||||||||||||||| |||||||||    
T  20741493 gtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaaaaaaaaaaatgataattgaaggaccgttttgttctgttttaaaag 20741592  T
Q  122 ggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  20741593 ggcaggatcagtttcgtgagtaggccaaaacacgaggaccaagagtgtaattaagc 20741648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 18 - 177
Target Start/End: Complemental strand, 31470476 - 31470316
Alignment:
Q  18 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttt 116  Q
    ||||||| | ||||||||||||||| | |||  | ||||| || |||||||||||||||||||||||||| ||||||||| ||| |||||||||| ||||    
T  31470476 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaataataattgaatgactgttttgttctgtttt 31470377  T
Q  117 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    ||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  31470376 aaaagagcatgaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagc 31470316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 9 - 177
Target Start/End: Complemental strand, 11276760 - 11276591
Alignment:
Q  9 ggggtaggtctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttg 107  Q
    |||||||| ||||||| ||||||||||||||||||| |||  | ||||| || |||||||||||||||| ||||||||||| |||||||||||| |||||    
T  11276760 ggggtaggcctaaaactgtcatttctctgcgtttttggagtttgaaaataggaggtaggacgaaaaatgaaacaaaaatgacaattgaaggaccattttg 11276661  T
Q  108 ttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||| ||||||||||| |||| ||||||| ||||||| |||||||||| |||| ||| ||||||||||||    
T  11276660 ttctgttttaaaagggtaggatcagtttcatgagtagaccaaaacacgcggactaaacgtgtaattaagc 11276591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 36 - 176
Target Start/End: Complemental strand, 29033577 - 29033436
Alignment:
Q  36 tgcgttttttgag-aataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtt 134  Q
    ||||||||| ||| || |||||||||||||||| ||||  ||||||||||||||||| |||||||| |||||||||| ||||||||||||||||||| ||    
T  29033577 tgcgtttttggaggaaaaaaatggggggtaggatgaaatgtgcaacaaaaatgataactgaaggacagttttgttctgttttaaaagggcaggaccaatt 29033478  T
Q  135 tcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 176  Q
    ||||||| ||||||||| ||||||||||||||||||||||||    
T  29033477 tcgtgagcaggccaaaatacgaggaccaaaagtgtaattaag 29033436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 52 - 177
Target Start/End: Complemental strand, 15827766 - 15827639
Alignment:
Q  52 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgt--tttgttctattttaaaagggcaggaccagtttcgtgagtaggccaa 149  Q
    ||||| || |||||||||||||||||||||||||||||| ||||||||||||  |||||| | |||||||||| ||| |||||||||||||||| |||||    
T  15827766 aaaataggaggtaggacgaaaaatgcaacaaaaatgatagttgaaggaccgtaatttgttatgttttaaaaggacagaaccagtttcgtgagtaagccaa 15827667  T
Q  150 aacacgaggaccaaaagtgtaattaagc 177  Q
    ||||||||||||||||||||||||||||    
T  15827666 aacacgaggaccaaaagtgtaattaagc 15827639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 50 - 175
Target Start/End: Original strand, 3835143 - 3835268
Alignment:
Q  50 ataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaa 149  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||||||  ||||||||| |||||||  |||||||||| ||||||||||||| |||    
T  3835143 ataaaatggggggtaggacgaaaaatgccacaaaaatgataattaaaggacaattttgttctgttttaaagaggcaggaccattttcgtgagtaggtcaa 3835242  T
Q  150 aacacgaggaccaaaagtgtaattaa 175  Q
    |||||  |||||||||||||||||||    
T  3835243 aacacatggaccaaaagtgtaattaa 3835268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 36 - 176
Target Start/End: Original strand, 29035040 - 29035180
Alignment:
Q  36 tgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagttt 135  Q
    ||||||||| ||| | ||||||| |||| ||||||||||||||||||||||||||| | ||||||  ||||||||| |||||||||||||  |||| |||    
T  29035040 tgcgtttttggaggaaaaaatggagggtgggacgaaaaatgcaacaaaaatgataactaaaggacaattttgttctgttttaaaagggcataaccaattt 29035139  T
Q  136 cgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 176  Q
    ||||||||||| ||||||||||||| |||||||||||||||    
T  29035140 cgtgagtaggctaaaacacgaggacgaaaagtgtaattaag 29035180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 52 - 177
Target Start/End: Original strand, 4811675 - 4811800
Alignment:
Q  52 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaa 151  Q
    ||||| || |||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||| || ||||||| ||||||||||||||    
T  4811675 aaaataggaggtatgatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaaatgcatgatcagtttcatgagtaggccaaaa 4811774  T
Q  152 cacgaggaccaaaagtgtaattaagc 177  Q
    |||||||| ||||||| |||||||||    
T  4811775 cacgaggatcaaaagtataattaagc 4811800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 90 - 177
Target Start/End: Complemental strand, 1149553 - 1149466
Alignment:
Q  90 aattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  1149553 aattgaaggaccattttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagc 1149466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 37 - 177
Target Start/End: Complemental strand, 18296285 - 18296146
Alignment:
Q  37 gcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttc 136  Q
    |||||||| ||| |||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||| |||||||||||||  | || |||     
T  18296285 gcgtttttggaggataaaatggggg-taggacgaaaaatgcaacaaaaatgataaatgaaggacggttttgttctgttttaaaagggcaatatcaatttt 18296187  T
Q  137 gtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    ||||||| | |||||||||||||| |||| | |||||||||    
T  18296186 gtgagtaagtcaaaacacgaggactaaaattataattaagc 18296146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 122 - 177
Target Start/End: Original strand, 22534214 - 22534269
Alignment:
Q  122 ggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||||| |||||||||| || ||||| |||||||||||||||||||||||||    
T  22534214 ggcaggaccattttcgtgagttggtcaaaatacgaggaccaaaagtgtaattaagc 22534269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 177
Target Start/End: Original strand, 35163557 - 35163732
Alignment:
Q  3 gcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaa-tgataattgaaggacc 101  Q
    |||||||||||||| ||||||| |||||||||||| |||||| |||   ||||| || |||||||| |||| ||||| |||||   ||| || | ||||     
T  35163557 gcatagggggtaggcctaaaactgtcatttctctgtgtttttggagttgaaaataggaggtaggactaaaactgcaaaaaaaacatatagtttagggacg 35163656  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
     |||||||  |||| |||  ||||| |||| |||||||||  || |||||  || |||||||||||||||||||||    
T  35163657 attttgtttgatttgaaagaggcagaaccattttcgtgagctggtcaaaatgcggggaccaaaagtgtaattaagc 35163732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 156; Significance: 1e-82; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 2 - 177
Target Start/End: Original strand, 39555946 - 39556121
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  39555946 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacgaaaatgataattgaaggacc 39556045  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
     ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39556046 attttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 39556121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 4 - 177
Target Start/End: Complemental strand, 20840734 - 20840561
Alignment:
Q  4 catagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgt 103  Q
    ||||||||||||||||||||| |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20840734 catagggggtaggtctaaaactgtcatttctctgcgtttaaggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgt 20840635  T
Q  104 tttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20840634 tttgttctattttaaaaaggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 20840561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 2 - 177
Target Start/End: Original strand, 31779021 - 31779196
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    ||||||||||||| ||||||||| | ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  31779021 agcatagggggtacgtctaaaactgacatttctctgcgtttttggagaataaaatggggggtgggacgaaaaatgcaacaaaaatgataattgaaggacc 31779120  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31779121 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 31779196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 2 - 175
Target Start/End: Complemental strand, 5137156 - 5136983
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5137156 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 5137057  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 175  Q
    |||||||||| ||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  5137056 gttttgttctgttttaaaagggcatgaccaatttcgtgagttggccaaaacacgaggaccaaaagtgtaattaa 5136983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 2 - 175
Target Start/End: Complemental strand, 41046876 - 41046703
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41046876 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 41046777  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 175  Q
    |||||||||| ||||||||||||| |||||||||||| | ||||||||||||||||||||||||||||||||||    
T  41046776 gttttgttctgttttaaaagggcatgaccagtttcgtaattaggccaaaacacgaggaccaaaagtgtaattaa 41046703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 2 - 177
Target Start/End: Original strand, 24300925 - 24301100
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  24300925 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatactcgaaggacc 24301024  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||| | |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  24301025 gttttgttttgttttaaaatggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 24301100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 2 - 177
Target Start/End: Complemental strand, 37727105 - 37726930
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37727105 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 37727006  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||| | |||||||||||||| ||||||||||| || || ||||||||||||||||||||||||||||||||    
T  37727005 gttttgttatgttttaaaagggcagaaccagtttcgtaagcagaccaaaacacgaggaccaaaagtgtaattaagc 37726930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 2 - 177
Target Start/End: Complemental strand, 23644638 - 23644463
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    |||||||||||||||||||||||  | |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  23644638 agcatagggggtaggtctaaaactattatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggact 23644539  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||||| |||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  23644538 gttttgttctgttttaaaatggcaggaccaatttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaagc 23644463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 2 - 177
Target Start/End: Original strand, 26837725 - 26837899
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    ||||||||||||| ||||||||| ||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||    
T  26837725 agcatagggggtaagtctaaaactgtcatttctctgcatttttggagaataaaatggggggtaggacaaaaaatgcaacaaaaatgatacttgaatgacc 26837824  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    ||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  26837825 gttttgttctatttt-aaagggcagaaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagc 26837899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 2 - 177
Target Start/End: Complemental strand, 30104657 - 30104483
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    ||||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  30104657 agcatagggggtaggtctaaaactgtcatttctctgcgtttttagataataaaatggggg-taggacgaaaaatgcaacaaaaatgataattgaaggacc 30104559  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    ||| | || | ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  30104558 gttctattttgttttaaaagggcaggaccaatttcgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagc 30104483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 26 - 177
Target Start/End: Complemental strand, 48453141 - 48452990
Alignment:
Q  26 gtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggca 125  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  48453141 gtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaatggca 48453042  T
Q  126 ggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  48453041 ggaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaatcaagc 48452990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 2 - 176
Target Start/End: Original strand, 25853596 - 25853770
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    ||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25853596 agcatagggggtaggtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 25853695  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 176  Q
     ||||||||| |||||||| | || ||||||||||||||||||  ||||||||||||| ||||||||||||||||    
T  25853696 attttgttctgttttaaaatgacaagaccagtttcgtgagtagagcaaaacacgaggatcaaaagtgtaattaag 25853770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 4 - 177
Target Start/End: Original strand, 32535330 - 32535507
Alignment:
Q  4 catagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaat-----gataattgaagg 98  Q
    |||||||| ||||||||||||  |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||     ||||||||||||    
T  32535330 cataggggttaggtctaaaactatcatttctctgcgtttttggagaataaaatggggg-taggacgaaaaatgcaacaaaaatttaatgataattgaagg 32535428  T
Q  99 accgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32535429 accgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 32535507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 9 - 177
Target Start/End: Complemental strand, 43973610 - 43973442
Alignment:
Q  9 ggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgt 108  Q
    |||||||||||||||| || |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43973610 ggggtaggtctaaaactgttatttatctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgt 43973511  T
Q  109 tctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    ||| |||||||||||||  | || ||||||||||||| |||||||||||||||||||||||||||||||    
T  43973510 tctgttttaaaagggcataatcattttcgtgagtaggacaaaacacgaggaccaaaagtgtaattaagc 43973442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 2 - 177
Target Start/End: Original strand, 27393946 - 27394121
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    |||||| |||||||||||||||| || |||||||||||||||| ||||||||||| |||||||||| | ||||||||||||||||||||||||||||| |    
T  27393946 agcatatggggtaggtctaaaactgttatttctctgcgtttttggagaataaaattgggggtaggatggaaaatgcaacaaaaatgataattgaaggatc 27394045  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||||| |||||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  27394046 gttttgttctgttttaaaaaggcaggacctatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 27394121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 2 - 177
Target Start/End: Original strand, 17464860 - 17465036
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaa-atgcaacaaaaatgataattgaaggac 100  Q
    |||||||||| |||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  17464860 agcataggggttaggtctaaaactgtcatttctctgcatttttggagaataaaatggggggtaggacaaaaaaatgcaacaaaaatgataattgaaggac 17464959  T
Q  101 cgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||||||||||||||||||   |||||||||| || ||||||||||||||||||||||||| |||||||||||    
T  17464960 cgttttgttctattttaaaagggtcagaccagtttcatgcgtaggccaaaacacgaggaccaaaaatgtaattaagc 17465036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 2 - 174
Target Start/End: Original strand, 22425182 - 22425354
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    |||||||||||||| |||||||   | |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  22425182 agcatagggggtagatctaaaaatctaatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaagtacc 22425281  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaatta 174  Q
    |||||||||| ||||| ||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||    
T  22425282 gttttgttctgttttacaagggcatgaccagattcgtgagtaggccgaaacacgaggaccaaaagtgtaatta 22425354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 2 - 175
Target Start/End: Original strand, 26274936 - 26275108
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    ||||||||||||||||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  26274936 agcatagggggtaggtctaaaactgtcatttctctgcggttttggagaataaaatggggggtaggacgaaaaa-gcaacaaaaatgataattgagggacc 26275034  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 175  Q
    ||||| |||| ||||||||||| ||||||||||||||||||||| |||||||| ||| |||||| | |||||||    
T  26275035 gttttattctgttttaaaagggtaggaccagtttcgtgagtaggtcaaaacacaagggccaaaattataattaa 26275108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 37727314 - 37727474
Alignment:
Q  18 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttt 116  Q
    ||||||| ||||||||||||||||| | |||  | ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  37727314 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 37727413  T
Q  117 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  37727414 aaaagagcaggaccagtttcgtgagtaggccaaaacatgaggaccaaaagtgtaattaagc 37727474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 43973824 - 43973984
Alignment:
Q  18 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttt 116  Q
    ||||||| ||||||||||||||||| | | | || ||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  43973824 ctaaaactgtcatttctctgcgtttctggggtatgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 43973923  T
Q  117 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43973924 aaaagggcagaaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 43973984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 37 - 175
Target Start/End: Original strand, 25612381 - 25612519
Alignment:
Q  37 gcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttc 136  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||||||||||||||||||||||| ||||    
T  25612381 gcgtttttggaggataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaagacagttttgttctattttaaaagggcaggaccaatttc 25612480  T
Q  137 gtgagtaggccaaaacacgaggaccaaaagtgtaattaa 175  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  25612481 gtgagtaggtcaaaacacgaggaccaaaagtgtaattaa 25612519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 20840945 - 20841105
Alignment:
Q  18 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttt 116  Q
    ||||||| | ||||||||||||||| | |||  | ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  20840945 ctaaaactgccatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 20841044  T
Q  117 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  20841045 aaaaaggcaggaccagtttcgtgagtaggccaaaacacgagcaccaaaagtgtaattaagc 20841105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 18 - 177
Target Start/End: Complemental strand, 25853395 - 25853235
Alignment:
Q  18 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttt 116  Q
    ||||||| || |||||||||||||| | |||  | ||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25853395 ctaaaactgttatttctctgcgtttctggagtttgaaaataggaggtagaacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttt 25853296  T
Q  117 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  25853295 aaaagggcatgaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 25853235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 18 - 177
Target Start/End: Complemental strand, 27393822 - 27393662
Alignment:
Q  18 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttt 116  Q
    ||||||| ||||||||||||||||| | | |  | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  27393822 ctaaaactgtcatttctctgcgtttctggggtttgaaaatagggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 27393723  T
Q  117 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||| |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  27393722 aaaatggcaggaccagttttgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagc 27393662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 18 - 177
Target Start/End: Complemental strand, 39555739 - 39555579
Alignment:
Q  18 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttt 116  Q
    ||||||| ||||||||||||||||| | |||  | ||||| || ||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  39555739 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtagaacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtttt 39555640  T
Q  117 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39555639 aaaatggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 39555579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 4275748 - 4275908
Alignment:
Q  18 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttt 116  Q
    ||||||| | ||||||||||||||| | |||  | ||||| || ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  4275748 ctaaaactgccatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 4275847  T
Q  117 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4275848 aaaagagcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 4275908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 5137365 - 5137525
Alignment:
Q  18 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttt 116  Q
    ||||||| ||||||||||||||||| | |||  | ||||| || | |||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  5137365 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggagataggactaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 5137464  T
Q  117 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  5137465 aaaagggcagaaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaagc 5137525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 18 - 177
Target Start/End: Complemental strand, 31778814 - 31778654
Alignment:
Q  18 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttt 116  Q
    ||||||| ||||||||||||||||| | |||  | ||||| || |||||||||||||||||||||||||||||||  |||||||||||||||||| ||||    
T  31778814 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataaacgaaggaccgttttgttctgtttt 31778715  T
Q  117 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  31778714 aaaagggcaggaccagtttcatgagtagaccaaaacacgaggaccaaaagtgtaattaagc 31778654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 16 - 177
Target Start/End: Original strand, 29801798 - 29801960
Alignment:
Q  16 gtctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatt 114  Q
    ||||||||  ||||||||||||||||| | |||  | ||||| || ||| |||||||||||||||||||||||||||||||| |||||||||||||| ||    
T  29801798 gtctaaaattgtcatttctctgcgtttctggagtttgaaaataggaggtgggacgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtt 29801897  T
Q  115 ttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  29801898 ttaaaagggcaggaccagtttcgtgagtaggccaaaatacgaggatcaaaagtgtaattaagc 29801960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 52 - 177
Target Start/End: Complemental strand, 17464617 - 17464492
Alignment:
Q  52 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaa 151  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| || ||||||||||    
T  17464617 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgcgaataggccaaaa 17464518  T
Q  152 cacgaggaccaaaagtgtaattaagc 177  Q
    ||||||||||||||||||||||||||    
T  17464517 cacgaggaccaaaagtgtaattaagc 17464492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 52 - 175
Target Start/End: Complemental strand, 32535085 - 32534962
Alignment:
Q  52 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaa 151  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||| |||||||    
T  32535085 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaaaggcaggaccaatttcgtgagtatgccaaaa 32534986  T
Q  152 cacgaggaccaaaagtgtaattaa 175  Q
    ||||||||||||||||||||||||    
T  32534985 cacgaggaccaaaagtgtaattaa 32534962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 52 - 177
Target Start/End: Original strand, 30098182 - 30098307
Alignment:
Q  52 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaa 151  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||| | |||||    
T  30098182 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttttaaaagggcaagaccagtttcgtgagtatgtcaaaa 30098281  T
Q  152 cacgaggaccaaaagtgtaattaagc 177  Q
    ||||||||||||||||||||||||||    
T  30098282 cacgaggaccaaaagtgtaattaagc 30098307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 23644849 - 23645009
Alignment:
Q  18 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttt 116  Q
    ||||||| ||||||||||||||||  | |||  | ||||| || ||||||| |||||||||||||||||||||||||||| |||||||||||||| ||||    
T  23644849 ctaaaactgtcatttctctgcgttactagagtttgaaaataggaggtaggatgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 23644948  T
Q  117 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  23644949 aaaagggtaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtataattaagc 23645009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 57 - 177
Target Start/End: Complemental strand, 29801477 - 29801357
Alignment:
Q  57 ggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacga 156  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||    
T  29801477 ggggggtaagacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaggaccagttttgtgagtatgccaaaacacga 29801378  T
Q  157 ggaccaaaagtgtaattaagc 177  Q
     ||||||||||||||||||||    
T  29801377 tgaccaaaagtgtaattaagc 29801357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 18 - 177
Target Start/End: Complemental strand, 22424975 - 22424815
Alignment:
Q  18 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttt 116  Q
    ||||||| ||||||||||||| ||| | |||  | ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  22424975 ctaaaactgtcatttctctgcatttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 22424876  T
Q  117 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||| ||| ||||||||||| |||||||  ||||||||| |||||||||||||||||||    
T  22424875 aaaaggacagaaccagtttcgtaagtaggcttaaacacgagaaccaaaagtgtaattaagc 22424815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 18 - 175
Target Start/End: Complemental strand, 26837521 - 26837363
Alignment:
Q  18 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttt 116  Q
    ||||||| ||||||||||||||||| | |||  | ||||| || ||||||||||||||||||||||||||||||||||||||||||||| ||| | || |    
T  26837521 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgtttcgttatgttat 26837422  T
Q  117 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 175  Q
    ||||||||||||||| ||||||||||||||||||| || |||||||||| |||||||||    
T  26837421 aaaagggcaggaccaatttcgtgagtaggccaaaatacaaggaccaaaaatgtaattaa 26837363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 36 - 177
Target Start/End: Original strand, 50116812 - 50116953
Alignment:
Q  36 tgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagttt 135  Q
    ||||||||| ||| | |||||||||||||||||||||| ||||||||||||||||| |||| |||||||||||||| ||| ||||||||| ||||| |||    
T  50116812 tgcgtttttggaggaaaaaatggggggtaggacgaaaattgcaacaaaaatgataactgaatgaccgttttgttctctttcaaaagggcatgaccaattt 50116911  T
Q  136 cgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||| | ||||||||||||| |||||||||||||||||    
T  50116912 cgtgagtaagtcaaaacacgaggatcaaaagtgtaattaagc 50116953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 52 - 175
Target Start/End: Complemental strand, 26274693 - 26274570
Alignment:
Q  52 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaa 151  Q
    ||||| || |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  26274693 aaaataggaggtatgacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtagtccaaaa 26274594  T
Q  152 cacgaggaccaaaagtgtaattaa 175  Q
     || |||| ||||| |||||||||    
T  26274593 tacaaggatcaaaaatgtaattaa 26274570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 39 - 177
Target Start/End: Original strand, 23228414 - 23228551
Alignment:
Q  39 gttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgt 138  Q
    |||||| ||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||  ||||||||  ||||||||||||| || || ||||||    
T  23228414 gtttttggaggataaaatgggaggtaggacgaaaaatgcaataaaaatgataattgaaggacaattttgttcg-ttttaaaagggcatgatcattttcgt 23228512  T
Q  139 gagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  23228513 gagtaggccaaaacacggggaccaaaagtgtaattaagc 23228551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 38 - 177
Target Start/End: Original strand, 32697106 - 32697244
Alignment:
Q  38 cgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcg 137  Q
    ||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||||| ||  ||||||||| ||||||||||||  ||| | |||||    
T  32697106 cgtttttggaggataaaatgggg-gtaggacgaaaaatgcaacaaaaatgataattgaagcacaattttgttctgttttaaaagggcgtgactaatttcg 32697204  T
Q  138 tgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    ||||||||| |||||||||||||||||| | |||||||||    
T  32697205 tgagtaggctaaaacacgaggaccaaaaatataattaagc 32697244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 18 - 175
Target Start/End: Complemental strand, 24300717 - 24300560
Alignment:
Q  18 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttt 116  Q
    ||||||| ||||||||||||||||| | |||  | ||||| || ||| ||||||||| ||||||||||||||||||||||| |||||||| |||| ||||    
T  24300717 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtgggacgaaaattgcaacaaaaatgataattgaagaaccgttttattctgtttt 24300618  T
Q  117 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 175  Q
    |||||| ||||||||||||||||| || |||||||||||| |||||||| |||||||||    
T  24300617 aaaaggacaggaccagtttcgtgaataagccaaaacacga-gaccaaaaatgtaattaa 24300560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 52 - 177
Target Start/End: Original strand, 51474753 - 51474878
Alignment:
Q  52 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaa 151  Q
    ||||| |||||||||||||||||||||||||||||||||| | ||||||  ||||||| | ||||||||||||| ||||| ||||||||||| |||||||    
T  51474753 aaaattgggggtaggacgaaaaatgcaacaaaaatgataactaaaggacaattttgttatgttttaaaagggcatgaccaatttcgtgagtatgccaaaa 51474852  T
Q  152 cacgaggaccaaaagtgtaattaagc 177  Q
    |||| | |||||||||||||||||||    
T  51474853 cacgggaaccaaaagtgtaattaagc 51474878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 64 - 180
Target Start/End: Complemental strand, 51473542 - 51473426
Alignment:
Q  64 aggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaa 163  Q
    ||||| |||| |||||||||||||||||  |||||||  ||||||||| ||||||||||||||||||| |||||||| ||| ||||||||||||||||||    
T  51473542 aggaccaaaagtgcaacaaaaatgataaccgaaggacaattttgttctgttttaaaagggcaggaccaatttcgtgaatagaccaaaacacgaggaccaa 51473443  T
Q  164 aagtgtaattaagcatt 180  Q
    |||||||||||||||||    
T  51473442 aagtgtaattaagcatt 51473426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 50 - 176
Target Start/End: Original strand, 25420558 - 25420684
Alignment:
Q  50 ataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaa 149  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||||||  |||| |||||||||||||||||  || || ||||||||||||| |||    
T  25420558 ataaaatggggggtatgacgaaaaatgcaacaaaaataataattgaaggacaattttattctattttaaaagggcgtgatcaatttcgtgagtaggtcaa 25420657  T
Q  150 aacacgaggaccaaaagtgtaattaag 176  Q
    || |||| || ||||||||||||||||    
T  25420658 aatacgatgatcaaaagtgtaattaag 25420684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 18 - 175
Target Start/End: Original strand, 41047083 - 41047239
Alignment:
Q  18 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttt 116  Q
    ||||||| | ||||||||||||||| | |||  | ||||| || ||||||||||||||||||||||||||||||||||||||| |||||| |||| ||||    
T  41047083 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaagga-cgttttattctgtttt 41047181  T
Q  117 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 175  Q
    |||||| ||| |||||||||||||||||||||||||| || || | |||||||||||||    
T  41047182 aaaaggacagaaccagtttcgtgagtaggccaaaacatgaaga-cgaaagtgtaattaa 41047239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 37 - 177
Target Start/End: Complemental strand, 37220698 - 37220558
Alignment:
Q  37 gcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttc 136  Q
    |||||||| ||| ||||||||| |||||||||||||| ||||||||||||||||| ||||||||  |||| |||| ||||||||| ||| || |  | |     
T  37220698 gcgtttttggaggataaaatggagggtaggacgaaaagtgcaacaaaaatgataactgaaggacaattttattctgttttaaaagagcatgatcgatatt 37220599  T
Q  137 gtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  37220598 gtgagtaggccaaaatacgaggaccaaaagtgtaattaagc 37220558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 52 - 177
Target Start/End: Complemental strand, 45966064 - 45965939
Alignment:
Q  52 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaa 151  Q
    |||||||||| ||| ||||||||||||||| |||||||||| |||||||  ||||||| | ||||||||| ||||||  |  |||||||||| |||||||    
T  45966064 aaaatgggggttagaacgaaaaatgcaacacaaatgataatcgaaggacatttttgttatgttttaaaagagcaggattaacttcgtgagtatgccaaaa 45965965  T
Q  152 cacgaggaccaaaagtgtaattaagc 177  Q
    ||||||||||||||||||||||||||    
T  45965964 cacgaggaccaaaagtgtaattaagc 45965939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 45 - 159
Target Start/End: Original strand, 18010157 - 18010271
Alignment:
Q  45 tgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtag 144  Q
    |||| ||||||||| ||| |||||||||||||||||||||||||||||||||  ||  ||||||||| |||||||||||| | |||| ||||||||||||    
T  18010157 tgaggataaaatggagggcaggacgaaaaatgcaacaaaaatgataattgaataacaattttgttctgttttaaaagggcggaaccattttcgtgagtag 18010256  T
Q  145 gccaaaacacgagga 159  Q
     | |||||| |||||    
T  18010257 acgaaaacaggagga 18010271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 92 - 177
Target Start/End: Original strand, 37222030 - 37222115
Alignment:
Q  92 ttgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    ||||||||  |||||||||| |||||||| |||||||||| ||| ||||||||| |||||||||||||||||||||||||||||||    
T  37222030 ttgaaggatggttttgttctgttttaaaatggcaggaccaattttgtgagtagggcaaaacacgaggaccaaaagtgtaattaagc 37222115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 51 - 177
Target Start/End: Complemental strand, 25419273 - 25419145
Alignment:
Q  51 taaaatggggggtaggacgaaaaatgcaacaaaaa-tgataattgaa-ggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggcca 148  Q
    |||||||||||  ||||| |||| ||||| ||||| ||||||||||| |||| |||||||||| |||||||||||||| || | ||||||||||| || |    
T  25419273 taaaatgggggtaaggactaaaactgcaaaaaaaaatgataattgaaaggacagttttgttctgttttaaaagggcagaactaatttcgtgagtaagcta 25419174  T
Q  149 aaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||| |||||||||| |||| ||||    
T  25419173 aaacacgaagaccaaaagtataatcaagc 25419145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 2 - 179
Target Start/End: Complemental strand, 37075864 - 37075685
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaa--tgataattgaagga 99  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||   |||||  | |||||||| |||| ||||| |||||    ||| || | |||    
T  37075864 agcatagggggtaggtctaaaacggtcatttctctgcgtttctggagttgaaaataagaggtaggactaaaactgcaaaaaaaaacatatagtttaggga 37075765  T
Q  100 ccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcat 179  Q
    | | ||||||  |||| |||  |||||||||| |||||||||| || |||||  ||  ||||||||||||||||||||||    
T  37075764 cgggtttgtttgatttgaaagaggcaggaccattttcgtgagttggtcaaaatgcggagaccaaaagtgtaattaagcat 37075685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 49407972 - 49407797
Alignment:
Q  1 tagcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggac 100  Q
    |||||||||||||||||||||||  ||||||||||||||||||| |||   ||||| || |||| ||| |||| || |  ||| || | | || | ||||    
T  49407972 tagcatagggggtaggtctaaaattgtcatttctctgcgtttttggagttgaaaataggaggtatgactaaaactgtacaaaacataa-agtttagggac 49407874  T
Q  101 cgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
     |||||||||||||| |||  |||| ||||| |||||||||  || |||||  ||||||||||||||||||||||||    
T  49407873 ggttttgttctatttgaaagaggcatgaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgtaattaagc 49407797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 2 - 177
Target Start/End: Original strand, 27200062 - 27200236
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    |||||| |||||||||||||| | ||||||||||||||||| | |||   ||||| || |||| ||| |||| ||||| ||| |||||| ||  |||||     
T  27200062 agcataaggggtaggtctaaacctgtcatttctctgcgtttctggagttgaaaataggaggtatgactaaaactgcaaaaaacatgatagtt-taggacg 27200160  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    || |||||| |||| |||  ||||| |||| |||||||||  || |||||  | ||||||||||||||||||||||    
T  27200161 gtattgttcgatttgaaagaggcagaaccattttcgtgagctggtcaaaatgcaaggaccaaaagtgtaattaagc 27200236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 36 - 173
Target Start/End: Complemental strand, 23227398 - 23227267
Alignment:
Q  36 tgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagttt 135  Q
    ||||||||| ||| ||||||||||| | ||||||||||||||||||||||||| ||||| |||||   |||||||| ||| |       ||||||| |||    
T  23227398 tgcgtttttggaggataaaatggggagaaggacgaaaaatgcaacaaaaatgaaaattggaggacaaatttgttctgtttca------gaggaccatttt 23227305  T
Q  136 cgtgagtaggccaaaacacgaggaccaaaagtgtaatt 173  Q
    |||||||| ||||||||||   |||||||||| |||||    
T  23227304 cgtgagtaagccaaaacacagagaccaaaagtctaatt 23227267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 51 - 175
Target Start/End: Complemental strand, 32695830 - 32695706
Alignment:
Q  51 taaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaa 150  Q
    ||||||| |||  ||||| |||| |||||||||||| ||||| | |||||  ||||||||| |||||||| | ||  | || |||||| |||||||||||    
T  32695830 taaaatgagggtaaggactaaaattgcaacaaaaataataatcgtaggacaattttgttctgttttaaaaagacataatcaatttcgtaagtaggccaaa 32695731  T
Q  151 acacgaggaccaaaagtgtaattaa 175  Q
    | | ||||||||||| |||||||||    
T  32695730 atatgaggaccaaaaatgtaattaa 32695706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 177
Target Start/End: Complemental strand, 55192293 - 55192119
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    ||||||||||||||||||||||| ||||||||||||||||| | |||   ||||| || |||||||| |||| | ||| ||| || ||| || | ||||     
T  55192293 agcatagggggtaggtctaaaactgtcatttctctgcgtttctggagttgaaaataggaggtaggactaaaactacaaaaaacat-atagtttatggacg 55192195  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    ||||||||  |||| |||  |||  ||||| |||||||||  || |||||  || |||| ||||||||||||||||    
T  55192194 gttttgtttgatttgaaagaggcgagaccattttcgtgagctggtcaaaatgcggggactaaaagtgtaattaagc 55192119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 177
Target Start/End: Original strand, 50900898 - 50901072
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    |||||||||||||| |||||||| |  |||||| ||||||| | |||   ||||| || |||||||| |||| ||||| ||| || ||| || | ||||     
T  50900898 agcatagggggtagatctaaaactgcaatttctttgcgtttatggagttgaaaataggaggtaggacaaaaactgcaaaaaacat-atagtttagggacg 50900996  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    ||||||||| ||||  ||  |||||| ||| ||| |||||  || |||||  ||||||||||||||||||||||||    
T  50900997 gttttgttcgatttgtaagaggcagggccatttttgtgagctggtcaaaatgcgaggaccaaaagtgtaattaagc 50901072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 176
Target Start/End: Original strand, 36701466 - 36701640
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    |||||| |||||||||||||||| | ||||||| || |||| | |||   ||||| || |||| ||| |||| ||||| ||| |||||| || | |||      
T  36701466 agcatatggggtaggtctaaaactgccatttctatgtgtttctggagttgaaaataggaggtatgactaaaactgcaaaaaacatgatagtttagggatg 36701565  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 176  Q
     |||||||| |||| |||  | || ||||| |||||||||  || |||||  |||||||||||||||||||||||    
T  36701566 attttgttcgatttgaaagagacatgaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgtaattaag 36701640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 103 - 177
Target Start/End: Original strand, 52375802 - 52375876
Alignment:
Q  103 ttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||| |||| |||  || ||||||| |||||||||| || |||||  ||||||||||||||||||||||||    
T  52375802 ttttgttcaatttaaaagaggtaggaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaagc 52375876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 29801592 - 29801532
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatgggggg 62  Q
    |||||| | |||| ||||||||| ||||||||||||| |||||  ||||||||||||||||    
T  29801592 agcatatgaggtatgtctaaaactgtcatttctctgcatttttgaagaataaaatgggggg 29801532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 177
Target Start/End: Original strand, 330307 - 330381
Alignment:
Q  103 ttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||  |||| |||| || ||||||| |||||||||| || |||||  ||||||||||| ||||||||||||    
T  330307 ttttgtttgatttaaaaaaggtaggaccattttcgtgagttggtcaaaatgcgaggaccaaatgtgtaattaagc 330381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 125 - 175
Target Start/End: Complemental strand, 22370649 - 22370599
Alignment:
Q  125 aggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 175  Q
    ||||||| |||||||||| || |||||  ||||||||||||||||||||||    
T  22370649 aggaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 22370599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 177
Target Start/End: Complemental strand, 40275168 - 40275094
Alignment:
Q  103 ttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||| |||| |||  || ||||||| |||||||||| || |||||   |||||||||||||||||||||||    
T  40275168 ttttgttcgatttaaaagaggtaggaccattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaagc 40275094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 177
Target Start/End: Complemental strand, 51828133 - 51827958
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatgggggg-taggacgaaaaatgcaacaaaaatgataattgaaggac 100  Q
    |||||||| ||| || ||||||| ||||||| | ||||||| | |||   ||||| ||| | |||||| |||||||||| ||| || ||| || | ||||    
T  51828133 agcataggtggttggactaaaactgtcatttatgtgcgtttctggagttgaaaatagggagataggactaaaaatgcaaaaaacat-atagtttagggac 51828035  T
Q  101 cgttttgttctattttaaaagggc-aggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
      |||||||| |||| ||||| || ||||||| |||||||||| || |||||  | ||||||||||||||||||||||    
T  51828034 gattttgttcgattt-aaaagagctaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagc 51827958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 176
Target Start/End: Original strand, 52237288 - 52237361
Alignment:
Q  103 ttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 176  Q
    |||||||| |||| |||  || ||||||| |||||||||| || |||||   ||||||||||||||||||||||    
T  52237288 ttttgttcgatttaaaagaggtaggaccattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaag 52237361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 156; Significance: 1e-82; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 4 - 175
Target Start/End: Complemental strand, 11090695 - 11090524
Alignment:
Q  4 catagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgt 103  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11090695 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgt 11090596  T
Q  104 tttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 175  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  11090595 tttgttctgttttaaaagggcaggacaagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 11090524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 2 - 177
Target Start/End: Complemental strand, 239528 - 239354
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    |||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  239528 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 239429  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  239428 gttttgttctgttttaaaa-ggcaggaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaattaagc 239354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 2 - 177
Target Start/End: Complemental strand, 40027316 - 40027141
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  40027316 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggagggtaggacaaaaaatgcaacaaaaatgataattgaaggacc 40027217  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  40027216 gttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaattaagc 40027141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 2 - 175
Target Start/End: Original strand, 40815714 - 40815887
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    ||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  40815714 agcatagagggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaagggcc 40815813  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 175  Q
    |||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  40815814 gttttgttctgttttaaaagggcattaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 40815887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 2 - 177
Target Start/End: Original strand, 18451200 - 18451375
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| |||||||||     
T  18451200 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggaagaaaaatgcaacaaaaatgatatttgaaggact 18451299  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
     ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  18451300 attttgttctgttttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagc 18451375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 2 - 177
Target Start/End: Complemental strand, 22374496 - 22374321
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    ||||||| || ||||||||||||  |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22374496 agcatagaggttaggtctaaaactatcatttctttgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 22374397  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22374396 gttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 22374321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 5 - 175
Target Start/End: Complemental strand, 14432315 - 14432145
Alignment:
Q  5 atagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgtt 104  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  14432315 atagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggaccaaaaatgcaacaaaaatgatagttgaaggaccgtt 14432216  T
Q  105 ttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 175  Q
    ||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  14432215 ttgttatattttaaaagggcaagaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaa 14432145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 2 - 177
Target Start/End: Complemental strand, 1978284 - 1978109
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    |||||| |||||||||||||||| ||||||||||||||||||| ||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||    
T  1978284 agcatatggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatgggggacaggacaaaaaatgcaacaaaaatgataattgaaggacc 1978185  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  1978184 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacaaggaccaaaaatgtaattaagc 1978109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 2 - 177
Target Start/End: Complemental strand, 43058509 - 43058334
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  43058509 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtagaacgaaaaatgcaacaaaaatgataattgaaggacc 43058410  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||||| |||||||| |||||||||||||| |||||| |||||||||||||||| |||||||||||||||||    
T  43058409 gttttgttctgttttaaaaaggcaggaccagtttagtgagttggccaaaacacgaggatcaaaagtgtaattaagc 43058334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 2 - 172
Target Start/End: Complemental strand, 3025641 - 3025472
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  3025641 agcatagggggtaggtctaaaactgtcatttctttgcgttttttgagaataaaatggggg-taggacgaaaaatgcaacaaaaatgatacttgaaggacc 3025543  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 172  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  3025542 gttttgttctgttttaaaagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaat 3025472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 4 - 177
Target Start/End: Complemental strand, 28616788 - 28616614
Alignment:
Q  4 catagggggtaggtctaaaacggtcatttctctgcgttttttg-agaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccg 102  Q
    ||||||||||||||||||||| |  |||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  28616788 catagggggtaggtctaaaactgctatttctctgcgttttttggataataaaatggggggtaggacgaaaattgcaacaaaaatgataattgaaggaccg 28616689  T
Q  103 ttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28616688 ttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 28616614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 2 - 177
Target Start/End: Complemental strand, 26538273 - 26538098
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    ||||||| || |||||||||||| || ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26538273 agcatagaggataggtctaaaactgttatttctctgtgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 26538174  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    | |||||||| |||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  26538173 gctttgttctgttttaaaagggcagaaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaagc 26538098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 9 - 175
Target Start/End: Original strand, 8425736 - 8425902
Alignment:
Q  9 ggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgt 108  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  8425736 ggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaattgggggtaagacgaaaaatgcaacaaaaatgataattgaaggacagttttgt 8425835  T
Q  109 tctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 175  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||| || |||||||||||||||||    
T  8425836 tctattttaaaagggcaggaccaatttcgtgagtagaccaaaacacaagaaccaaaagtgtaattaa 8425902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 9 - 177
Target Start/End: Original strand, 26538454 - 26538623
Alignment:
Q  9 ggggtaggtctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttg 107  Q
    |||||||||||||||| ||||||||||||||||| | | |  | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26538454 ggggtaggtctaaaactgtcatttctctgcgtttctggggtttgaaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttg 26538553  T
Q  108 ttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26538554 ttctgttttaagagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 26538623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 37 - 177
Target Start/End: Complemental strand, 20444890 - 20444750
Alignment:
Q  37 gcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttc 136  Q
    |||||||| ||| |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  20444890 gcgtttttggaggataaaatggggggtaggacgaaaactgcaacaaaaatgataactgaaggaccgttttgttctgttttaaaagggcaggaccagtttc 20444791  T
Q  137 gtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  20444790 gtgagttggccaaaacacgaggaccaaaagtgtaattaagc 20444750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 4 - 177
Target Start/End: Complemental strand, 7446519 - 7446343
Alignment:
Q  4 catagggggtaggtctaaaa----cggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaagga 99  Q
    ||||||||||| ||||||||    | ||||||||||||||||||| |||||||||||||||| || |||||||||||||| |||||||||||||||| ||    
T  7446519 catagggggtatgtctaaaattaactgtcatttctctgcgtttttggagaataaaatggggg-tatgacgaaaaatgcaataaaaatgataattgaatga 7446421  T
Q  100 ccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||||||| ||||||||||||||||||| |||| ||||||| |||||||||||||| |||||||||||||||||    
T  7446420 ccgttttgttctgttttaaaagggcaggaccaatttcatgagtagaccaaaacacgaggatcaaaagtgtaattaagc 7446343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 7446730 - 7446890
Alignment:
Q  18 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttt 116  Q
    ||||||| ||||||||||||||||||| |||  | ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  7446730 ctaaaactgtcatttctctgcgtttttggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 7446829  T
Q  117 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    ||||||||||||||||||||||||||| | ||||||||||||| ||||| |||||||||||    
T  7446830 aaaagggcaggaccagtttcgtgagtaaggcaaaacacgaggatcaaaaatgtaattaagc 7446890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 18 - 177
Target Start/End: Complemental strand, 18450991 - 18450831
Alignment:
Q  18 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttt 116  Q
    ||||||| ||||||||||||||||| | |||  | ||||| || |||||||| |||||||||| ||||||||||||||||||||||||||||||| ||||    
T  18450991 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggactaaaaatgcaaaaaaaatgataattgaaggaccgttttgttctgtttt 18450892  T
Q  117 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18450891 aaaagggctggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 18450831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 22374709 - 22374869
Alignment:
Q  18 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttt 116  Q
    ||||||| ||||||||||||| ||| | |||  | ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  22374709 ctaaaactgtcatttctctgcatttctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 22374808  T
Q  117 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  22374809 aaaagggcaagaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 22374869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 18 - 176
Target Start/End: Complemental strand, 40815506 - 40815347
Alignment:
Q  18 ctaaaacggtcatttctctgcgttttttgagaataaaa-tggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttt 116  Q
    ||||||| ||||||||||||||||| | |||  ||||| | || ||||||||||||||||||||||||||||||||||||| ||||||||||| | ||||    
T  40815506 ctaaaactgtcatttctctgcgtttctggagtttaaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaagaaccgttttgttatgtttt 40815407  T
Q  117 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 176  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40815406 aaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 40815347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 37 - 177
Target Start/End: Original strand, 35781067 - 35781207
Alignment:
Q  37 gcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttc 136  Q
    |||||||| ||| |||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||| ||||||||||||| ||||| ||||    
T  35781067 gcgtttttggaggataaaatgggggttaggacgaaaaatgcaacaaaaatgataattgaaggatagttttgttctgttttaaaagggcatgaccattttc 35781166  T
Q  137 gtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  35781167 gtgagtaggccaaaacacgaggatcaaaagtgtaattaagc 35781207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 52 - 175
Target Start/End: Original strand, 40027559 - 40027682
Alignment:
Q  52 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaa 151  Q
    ||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  40027559 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaa 40027658  T
Q  152 cacgaggaccaaaagtgtaattaa 175  Q
    ||||||||||||||||||||||||    
T  40027659 cacgaggaccaaaagtgtaattaa 40027682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 53 - 177
Target Start/End: Original strand, 20440451 - 20440575
Alignment:
Q  53 aaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaac 152  Q
    ||||||||| ||||||||||| ||||||||||||||||| |||| |||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  20440451 aaatgggggataggacgaaaactgcaacaaaaatgataactgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgagttggccaaaac 20440550  T
Q  153 acgaggaccaaaagtgtaattaagc 177  Q
    |||||||||||||||||||||||||    
T  20440551 acgaggaccaaaagtgtaattaagc 20440575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 37 - 177
Target Start/End: Complemental strand, 35779849 - 35779709
Alignment:
Q  37 gcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttc 136  Q
    |||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||  ||||||||| |||||||| |||||||||| ||||    
T  35779849 gcgtttttggaggataaaatggggggtaggacaaaaaatgcaacaaaaatgataattgaaggacaattttgttctgttttaaaatggcaggaccattttc 35779750  T
Q  137 gtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    ||||||| | |||||||||||||||||||||||||||||||    
T  35779749 gtgagtatgtcaaaacacgaggaccaaaagtgtaattaagc 35779709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 63 - 177
Target Start/End: Original strand, 11090950 - 11091064
Alignment:
Q  63 taggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacca 162  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  11090950 taggacgaaaaatacaacaataatgataattgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggacca 11091049  T
Q  163 aaagtgtaattaagc 177  Q
    |||||||||||||||    
T  11091050 aaagtgtaattaagc 11091064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 52 - 177
Target Start/End: Original strand, 1978528 - 1978653
Alignment:
Q  52 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaa 151  Q
    ||||| || |||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  1978528 aaaataggaggtaggacaaaaaatgcaacaaaaatgataattgaaggactgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaa 1978627  T
Q  152 cacgaggaccaaaagtgtaattaagc 177  Q
    ||| ||||||||||||||||||||||    
T  1978628 cacaaggaccaaaagtgtaattaagc 1978653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 52 - 177
Target Start/End: Original strand, 28617033 - 28617158
Alignment:
Q  52 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaa 151  Q
    ||||| || |||| |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| ||| ||||||||||||||||||||||||    
T  28617033 aaaataggaggtaagacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttttaaaaggacagaaccagtttcgtgagtaggccaaaa 28617132  T
Q  152 cacgaggaccaaaagtgtaattaagc 177  Q
    ||||||||||||||||||||||||||    
T  28617133 cacgaggaccaaaagtgtaattaagc 28617158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 239736 - 239896
Alignment:
Q  18 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttt 116  Q
    ||||||| | ||||||||||||||| | |||  | ||||| || |||| ||||||||| |||||||||||||||||||||||||| ||||||||| ||||    
T  239736 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtatgacgaaaaacgcaacaaaaatgataattgaaggaccattttgttctgtttt 239835  T
Q  117 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  239836 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaactaagc 239896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 61 - 177
Target Start/End: Original strand, 28847123 - 28847239
Alignment:
Q  61 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggac 160  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||||||||||||||||| |||||||||||||||    
T  28847123 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttttgttttaaaagagcaggaccagtttcgtgagtagaccaaaacacgaggac 28847222  T
Q  161 caaaagtgtaattaagc 177  Q
    ||||| |||||||||||    
T  28847223 caaaaatgtaattaagc 28847239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 43058717 - 43058876
Alignment:
Q  18 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttt 116  Q
    ||||||| | ||||||||||||||| | |||  | ||||| || |||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||    
T  43058717 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaa-tgataattgaaggaccattttgttctgtttt 43058815  T
Q  117 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  43058816 aaaagagcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagc 43058876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 37 - 176
Target Start/End: Complemental strand, 8972378 - 8972239
Alignment:
Q  37 gcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttc 136  Q
    |||||||| ||| ||||||| |||||||| |||||||||||||||||||||||||||||| |||  ||||||||| |||| |||||||| ||||| ||||    
T  8972378 gcgtttttggaggataaaatagggggtagaacgaaaaatgcaacaaaaatgataattgaatgacaattttgttctgttttgaaagggcatgaccattttc 8972279  T
Q  137 gtgagtaggccaaaacacgaggaccaaaagtgtaattaag 176  Q
    ||||| | ||||||||||||||||||||||||||||||||    
T  8972278 gtgagcatgccaaaacacgaggaccaaaagtgtaattaag 8972239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 36 - 176
Target Start/End: Complemental strand, 15551641 - 15551501
Alignment:
Q  36 tgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagttt 135  Q
    ||||||||| ||| ||||||||| |||| ||||||||||||||||||||||||||| ||||||||  ||||||| | |||||||| |||| ||||| |||    
T  15551641 tgcgtttttggaggataaaatggagggttggacgaaaaatgcaacaaaaatgataactgaaggacatttttgttttgttttaaaaaggcatgaccatttt 15551542  T
Q  136 cgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 176  Q
    ||||||||  |||||||||||||||||||||||||||||||    
T  15551541 cgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 15551501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 19 - 177
Target Start/End: Original strand, 3025848 - 3026005
Alignment:
Q  19 taaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttta 117  Q
    |||||| ||||||||||||| ||| | |||  | ||||| || |||||||||||||||||||||||||| |||||||||||||||||||||| | |||||    
T  3025848 taaaactgtcatttctctgcatttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaataataattgaaggaccgttttgtt-tgtttta 3025946  T
Q  118 aaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    ||||||||| |||| ||||||||||| ||||||||||||||||||||| |||||||||||    
T  3025947 aaagggcagaaccaatttcgtgagtaagccaaaacacgaggaccaaaa-tgtaattaagc 3026005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 18 - 176
Target Start/End: Original strand, 14432525 - 14432684
Alignment:
Q  18 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttt 116  Q
    ||||||| ||||||||||||||||| | |||  | ||||| || ||||||| |||||||||||||||||| |||||||||| ||| |||| |||| ||||    
T  14432525 ctaaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggatgaaaaatgcaacaaaaataataattgaagaaccattttattctgtttt 14432624  T
Q  117 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 176  Q
    |||| |||| |||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  14432625 aaaatggcatgaccagtttcatgagtaggccaaaacacgaggaccaaaaatgtaattaag 14432684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 8425514 - 8425358
Alignment:
Q  19 taaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttta 117  Q
    |||||| ||||||||||||| ||| | |||  | ||||| || ||||||||||||||||||||| ||||||||||||||| ||||||||||||| |||||    
T  8425514 taaaactgtcatttctctgcatttctggagtttgaaaataggaggtaggacgaaaaatgcaacacaaatgataattgaag-accgttttgttctgtttta 8425416  T
Q  118 aaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 175  Q
    ||| || | ||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  8425415 aaaaggtaagaccaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaa 8425358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 52 - 176
Target Start/End: Original strand, 15552473 - 15552596
Alignment:
Q  52 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaa 151  Q
    ||||||| |||||||||||||||| |||||||||||||||||||| |||  ||||||||| |||||||||||| ||| || |||||||||||||||||||    
T  15552473 aaaatggagggtaggacgaaaaatacaacaaaaatgataattgaatgacaattttgttctgttttaaaagggc-ggatcattttcgtgagtaggccaaaa 15552571  T
Q  152 cacgaggaccaaaagtgtaattaag 176  Q
    ||  | |||||||||||||||||||    
T  15552572 cattatgaccaaaagtgtaattaag 15552596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 2 - 177
Target Start/End: Original strand, 28143400 - 28143574
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    ||||||||||||||||||||||| ||||||||||||||||| | |||   ||||| ||  ||||||| |||| ||||| ||| |||||| || | ||||     
T  28143400 agcatagggggtaggtctaaaactgtcatttctctgcgtttctggagttgaaaataggacgtaggactaaaactgcaa-aaacatgatagtttagggacg 28143498  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
     |||||||| |||| |||  |||||||||| |||||||||  || |||||  ||||||||||||||| ||||||||    
T  28143499 attttgttcgatttgaaagaggcaggaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgaaattaagc 28143574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 177
Target Start/End: Original strand, 31797166 - 31797322
Alignment:
Q  20 aaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaa 119  Q
    ||||| ||||||||||||||||| | |||   ||||| || |||||||| |||| ||||| ||| || ||| || | |||| ||||||||| |||| |||    
T  31797166 aaaactgtcatttctctgcgtttctagagttgaaaataggaggtaggactaaaactgcaaaaaacat-atagtttagggacggttttgttcgatttgaaa 31797264  T
Q  120 agggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
      |||| ||||| |||||||||  || |||||   |||||||||||||||||||||||    
T  31797265 gaggcatgaccattttcgtgagctggtcaaaatgtgaggaccaaaagtgtaattaagc 31797322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 103 - 177
Target Start/End: Original strand, 42192714 - 42192788
Alignment:
Q  103 ttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||| |||| |||  || ||||||| |||||||||| || |||||  ||||||||||||||||||||||||    
T  42192714 ttttgttcgatttaaaagaggtaggaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaagc 42192788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 177
Target Start/End: Complemental strand, 63133 - 62958
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatgggggg-taggacgaaaaatgcaacaaaaatgataattgaaggac 100  Q
    |||||||| ||| || ||||||| ||||||| | ||||||| |||||    |||| ||| | |||||| |||| ||||| ||| || ||| || ||||||    
T  63133 agcataggtggttggactaaaactgtcatttatgtgcgtttcttgagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttaaggac 63035  T
Q  101 cgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
      |||||||| ||||||||| || ||||||| |||||||||| || |||||    ||||||| ||||||||||||||    
T  63034 gattttgttcgattttaaaaaggtaggaccattttcgtgagttggtcaaaatggaaggaccataagtgtaattaagc 62958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 177
Target Start/End: Complemental strand, 4355806 - 4355756
Alignment:
Q  127 gaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    ||||| ||||||||||||| |||||  | ||||||||||||||||||||||    
T  4355806 gaccaatttcgtgagtaggtcaaaatgcaaggaccaaaagtgtaattaagc 4355756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 177
Target Start/End: Original strand, 6949915 - 6949989
Alignment:
Q  103 ttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    ||||||||||||| |||   | ||||||| |||||||||| || |||||  | ||||||||||||||||||||||    
T  6949915 ttttgttctatttaaaagatgtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagc 6949989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 177
Target Start/End: Complemental strand, 38008025 - 38007951
Alignment:
Q  103 ttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||| |||| |||  || ||||||| |||||||||| || |||||  | ||||||||||||||||||||||    
T  38008025 ttttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagc 38007951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 177
Target Start/End: Complemental strand, 42192315 - 42192241
Alignment:
Q  103 ttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||| |||| |||  || ||||||| |||||||||| || |||||   |||||||||||||||||||||||    
T  42192315 ttttgttcgatttaaaagaggtaggaccattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaagc 42192241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 177
Target Start/End: Original strand, 43216180 - 43216254
Alignment:
Q  103 ttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||| |||| |||  || ||||||| |||||||||| || |||||| | ||||| ||||||||||||||||    
T  43216180 ttttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaacgcaaggactaaaagtgtaattaagc 43216254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 168
Target Start/End: Original strand, 2190480 - 2190612
Alignment:
Q  37 gcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaa-tgataattgaaggaccgttttgttctattttaaaagggcaggaccagttt 135  Q
    |||||||| ||||  ||| | ||||||||||| |||| ||||| |||   |||||||| | ||||  |||||||| |||| |||| |||||||||| |||    
T  2190480 gcgtttttggagatgaaattcgggggtaggactaaaactgcaaaaaagcgtgataatttagggacgattttgttcgatttgaaaaaggcaggaccaattt 2190579  T
Q  136 cgtgagtaggccaaaacacgaggaccaaaagtg 168  Q
    ||||||  || |||||  ||| |||||||||||    
T  2190580 cgtgagctggtcaaaatgcgatgaccaaaagtg 2190612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 25336093 - 25336145
Alignment:
Q  125 aggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    ||||||| |||||||||| || |||||  | ||||||||||||||||||||||    
T  25336093 aggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagc 25336145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 152; Significance: 3e-80; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 2 - 177
Target Start/End: Original strand, 19176659 - 19176834
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    |||||||| |||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19176659 agcataggtggtaggtctaaaactgtcatttgtctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 19176758  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  19176759 gttttgttctgttttaaaagggcaggaccagttacgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 19176834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 2 - 177
Target Start/End: Original strand, 9930026 - 9930201
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    |||||||||||||||||||||||  ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  9930026 agcatagggggtaggtctaaaactatcatttctctgcgcttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatagttgaaggacc 9930125  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  9930126 attttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaagc 9930201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 2 - 177
Target Start/End: Complemental strand, 12572040 - 12571864
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggt-aggacgaaaaatgcaacaaaaatgataattgaaggac 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||    
T  12572040 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggttaggacgaaaaatgcaacaaaaatgataattgaatgac 12571941  T
Q  101 cgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    ||||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12571940 cgttttgttctgttttaaaagggtagaaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 12571864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 5 - 177
Target Start/End: Complemental strand, 41681306 - 41681135
Alignment:
Q  5 atagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgtt 104  Q
    |||||||||| || |||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  41681306 atagggggtatgtttaaaactgtcatttctctgcgtttttggagaataaaatggggg-taggacgaaaaatgcaacaaaaatgataattgaaggaccgtt 41681208  T
Q  105 ttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41681207 ttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 41681135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 4 - 177
Target Start/End: Complemental strand, 11656630 - 11656456
Alignment:
Q  4 catagggggtaggtctaaaacggtcatttctctgcgttttttg-agaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccg 102  Q
    |||| |||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  11656630 cataaggggtaggtctaaaactgccatttctctgcgttttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatggtaattgaaggaccg 11656531  T
Q  103 ttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    ||||||||  ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11656530 ttttgttcagttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 11656456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 2 - 175
Target Start/End: Complemental strand, 33328334 - 33328161
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    ||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||| | ||||||||||||||||||||||||||||||| ||||||||||    
T  33328334 agcatagggggtaggtctaaaactgtcatttctttgcgtttttggagaataaaatcgagggtaggacgaaaaatgcaacaaaaatgatacttgaaggacc 33328235  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 175  Q
    |||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  33328234 gttttgttctgttttaaaagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 33328161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 2 - 174
Target Start/End: Complemental strand, 13224816 - 13224645
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||      
T  13224816 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaattcaacaaaaatgataattgaaggatt 13224717  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaatta 174  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||    
T  13224716 gttttgttctgttttaaaagggca-gaccagtttcgtgagtaggccaaaacacgaagaccaaaagtgtaatta 13224645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 2 - 177
Target Start/End: Original strand, 44831614 - 44831789
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    ||||||||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||  |||    
T  44831614 agcatagggggtaggtctaaaactgtcatttctctgtgtttttggagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaataacc 44831713  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||    
T  44831714 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagc 44831789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 2 - 177
Target Start/End: Complemental strand, 31133396 - 31133221
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    |||||| | |||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||     
T  31133396 agcataagaggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggact 31133297  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||| | |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  31133296 gttttgttttgttttaaaagggcgggaccagtttcgtgagtagggcaaaacacgaggaccaaaagtgtaattaagc 31133221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 2 - 177
Target Start/End: Original strand, 9178005 - 9178179
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    |||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||||| ||||||||||    
T  9178005 agcataggaggtaggtctaaaattgtcatttctctgcgttttttgagaataaaatggggg-taagatgaaaaatgcaacaaaaatgatacttgaaggacc 9178103  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||||| |||||| |||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  9178104 gttttgttctgttttaagagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 9178179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 13225023 - 13225183
Alignment:
Q  18 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttt 116  Q
    ||||||| | ||||||||||||||| | |||  | ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  13225023 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 13225122  T
Q  117 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13225123 aaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 13225183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 26 - 177
Target Start/End: Complemental strand, 19176443 - 19176291
Alignment:
Q  26 gtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggc 124  Q
    ||||||||||||||||| | |||  | ||||| || ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  19176443 gtcatttctctgcgtttctggagtttgaaaataggaggtcggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggc 19176344  T
Q  125 aggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  19176343 aggactagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 19176291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 19 - 178
Target Start/End: Original strand, 31133605 - 31133765
Alignment:
Q  19 taaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttta 117  Q
    |||||| ||||||||||||| ||| | |||  | ||||| || |||| ||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  31133605 taaaaccgtcatttctctgcatttctggagtttgaaaataggaggtatgacgaaaaatgcaacaaaaataataattgaaggaccgttttgttctgtttta 31133704  T
Q  118 aaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagca 178  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  31133705 aaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagca 31133765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 61 - 177
Target Start/End: Original strand, 41681562 - 41681678
Alignment:
Q  61 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggac 160  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||    
T  41681562 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggtaggaccagtttcgtgattaggccaaaacacgaggac 41681661  T
Q  161 caaaagtgtaattaagc 177  Q
    |||||||||||||||||    
T  41681662 caaaagtgtaattaagc 41681678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 18 - 177
Target Start/End: Complemental strand, 44831408 - 44831248
Alignment:
Q  18 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttt 116  Q
    |||||||  |||||||||||||||| | |||  | ||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  44831408 ctaaaactatcatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatggaaggaccgttttgttctgtttt 44831309  T
Q  117 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  44831308 aaaagggcaggaccaatttcgtgagtaggccaaaacatgaggaccaaaagtgtaattaagc 44831248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 27 - 177
Target Start/End: Original strand, 34540941 - 34541092
Alignment:
Q  27 tcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggca 125  Q
    |||||||||||||||| || ||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||| |||    
T  34540941 tcatttctctgcgtttcttaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagagca 34541040  T
Q  126 ggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34541041 ggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 34541092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 61 - 175
Target Start/End: Complemental strand, 9929026 - 9928912
Alignment:
Q  61 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggac 160  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||    
T  9929026 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtagatcaaaacacgaggac 9928927  T
Q  161 caaaagtgtaattaa 175  Q
    |||||||||||||||    
T  9928926 caaaagtgtaattaa 9928912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 52 - 177
Target Start/End: Original strand, 11656876 - 11657001
Alignment:
Q  52 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaa 151  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| | ||||||||||||||||||||||||||    
T  11656876 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttttaaaaggccgggaccagtttcgtgagtaggccaaaa 11656975  T
Q  152 cacgaggaccaaaagtgtaattaagc 177  Q
    ||||||||||||||||||||||||||    
T  11656976 cacgaggaccaaaagtgtaattaagc 11657001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 2 - 175
Target Start/End: Original strand, 4630161 - 4630328
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    ||||||||||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||| |||||||||||||      ||||||||||||||    
T  4630161 agcatagggggtaggtctaaaactgtcatttttctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaaca------ataattgaaggacc 4630254  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 175  Q
    ||| | |||| ||||||||  ||||||||| |||||||||||| ||||||||||| || |||||||||||||||    
T  4630255 gttgtattctgttttaaaaatgcaggaccaatttcgtgagtagcccaaaacacgatgatcaaaagtgtaattaa 4630328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 18 - 177
Target Start/End: Complemental strand, 33743082 - 33742923
Alignment:
Q  18 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttt 116  Q
    ||||||| ||||||||||||||||| | | | || ||||| || |||||||||||||||||| ||||||||||||||||| |||||||| ||||| ||||    
T  33743082 ctaaaactgtcatttctctgcgtttctggggtatgaaaataggaggtaggacgaaaaatgcatcaaaaatgataattgaaagaccgttt-gttctgtttt 33742984  T
Q  117 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  33742983 aaaagggcaagaccagtttcgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagc 33742923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 52 - 175
Target Start/End: Original strand, 12572270 - 12572393
Alignment:
Q  52 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaa 151  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||| |||||||||||||| ||||||    
T  12572270 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagagcatgactagtttcgtgagtagaccaaaa 12572369  T
Q  152 cacgaggaccaaaagtgtaattaa 175  Q
    ||||||||||||||||||||||||    
T  12572370 cacgaggaccaaaagtgtaattaa 12572393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 18 - 176
Target Start/End: Original strand, 33328524 - 33328683
Alignment:
Q  18 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttt 116  Q
    ||||||| | ||||||||||||||| | |||  | |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| | ||||    
T  33328524 ctaaaactgccatttctctgcgtttctggagtttgaaaatgggaggtgggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 33328623  T
Q  117 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 176  Q
    ||||| ||| ||| |||||||||||||||| |||||||||||||||||||| ||||||||    
T  33328624 aaaagagcatgactagtttcgtgagtaggctaaaacacgaggaccaaaagtctaattaag 33328683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 4 - 131
Target Start/End: Original strand, 33743290 - 33743417
Alignment:
Q  4 catagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgt 103  Q
    ||||||| ||||||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||    
T  33743290 catagggagtaggtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaaaaccgt 33743389  T
Q  104 tttgttctattttaaaagggcaggacca 131  Q
    |||||||| |||||||| ||||| ||||    
T  33743390 tttgttctgttttaaaaaggcagaacca 33743417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 52 - 177
Target Start/End: Complemental strand, 4629923 - 4629798
Alignment:
Q  52 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaa 151  Q
    ||||| || |||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || |||||||    
T  4629923 aaaataggaggtaagacgaaaaatgcaataaaaatgataattgaatgaccgttttgttctattttaaaagggcaggaccagtttcgtgaatatgccaaaa 4629824  T
Q  152 cacgaggaccaaaagtgtaattaagc 177  Q
    |||||| |  ||||||| ||||||||    
T  4629823 cacgagaattaaaagtgcaattaagc 4629798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 70 - 177
Target Start/End: Original strand, 11336959 - 11337066
Alignment:
Q  70 aaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgt 169  Q
    ||||||||||||||||||||||||||| ||||||||| |||| |||||||||||| |||||| ||||||||||| |||||||||||| ||||||||||||    
T  11336959 aaaaatgcaacaaaaatgataattgaaagaccgttttattctgttttaaaagggcgggaccaatttcgtgagtaagccaaaacacgaagaccaaaagtgt 11337058  T
Q  170 aattaagc 177  Q
    ||||||||    
T  11337059 aattaagc 11337066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 40 - 175
Target Start/End: Complemental strand, 10918264 - 10918129
Alignment:
Q  40 ttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtg 139  Q
    ||||| ||| ||||||||||||||| || |||||||||||||||||||||| |||||||||  ||||| ||| ||||||   |||| ||||| |||||||    
T  10918264 tttttggaggataaaatggggggtatgatgaaaaatgcaacaaaaatgatatttgaaggacaattttgctctgttttaaggaggcaagaccaatttcgtg 10918165  T
Q  140 agtaggccaaaacacgaggaccaaaagtgtaattaa 175  Q
    |||||  |||||||||||||| |||| |||||||||    
T  10918164 agtagatcaaaacacgaggacaaaaaatgtaattaa 10918129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 37 - 177
Target Start/End: Original strand, 8073956 - 8074095
Alignment:
Q  37 gcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttc 136  Q
    |||||||| |||  ||||||||||| |  |||| |||||||||||||| ||||||||||||||   ||||||||| |||||||||| || || || ||||    
T  8073956 gcgtttttggagggtaaaatgggggttttgacgtaaaatgcaacaaaa-tgataattgaaggatgattttgttctgttttaaaaggacatgatcattttc 8074054  T
Q  137 gtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||| |||||||||||||||||||||||||| ||| |||||    
T  8074055 gtgaataggccaaaacacgaggaccaaaagtataactaagc 8074095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 43958326 - 43958264
Alignment:
Q  37 gcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaagga 99  Q
    |||||||| ||||||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  43958326 gcgtttttggagaataaaatagagggtaggacgaaaaatgcaacaaaaatgataattgaagga 43958264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 145 - 177
Target Start/End: Complemental strand, 9177700 - 9177668
Alignment:
Q  145 gccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||||||||||||||||||||||||||||    
T  9177700 gccaaaacacgaggaccaaaagtgtaattaagc 9177668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 103 - 179
Target Start/End: Original strand, 28254897 - 28254973
Alignment:
Q  103 ttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcat 179  Q
    |||||||| |||| |||  || ||||||| |||||||||| || |||||  | ||||||||||||||||||||||||    
T  28254897 ttttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagcat 28254973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 138 - 177
Target Start/End: Original strand, 10919691 - 10919730
Alignment:
Q  138 tgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||| ||||||||||||||||||||| |||||||||    
T  10919691 tgagtaggtcaaaacacgaggaccaaaagtataattaagc 10919730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 177
Target Start/End: Complemental strand, 15255928 - 15255854
Alignment:
Q  103 ttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||| |||| |||  || ||||||| |||||||||| || |||||  | ||||||||||||||||||||||    
T  15255928 ttttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagc 15255854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 177
Target Start/End: Original strand, 35427308 - 35427357
Alignment:
Q  128 accagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||| |||||||||| || |||||  ||||||||||||||||||||||||    
T  35427308 accattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaagc 35427357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951 (Bit Score: 150; Significance: 4e-79; HSPs: 2)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 4 - 177
Target Start/End: Complemental strand, 1841 - 1668
Alignment:
Q  4 catagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgt 103  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |    
T  1841 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaacat 1742  T
Q  104 tttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  1741 tttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacaggaggaccaaaagtgtaattaagc 1668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 2051 - 2211
Alignment:
Q  18 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttt 116  Q
    |||||||  |||||||||||||||| | |||  | ||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  2051 ctaaaactttcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 2150  T
Q  117 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  2151 aaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagc 2211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 148; Significance: 6e-78; HSPs: 2)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 2 - 177
Target Start/End: Original strand, 4576 - 4751
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    ||||||||||||||||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  4576 agcatagggggtaggtctaaaactgtcatttctctgtgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 4675  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  4676 gttttgttctgttttaaaagggcaggaccagtttcgtgagtatgccaaaacacgaagaccaaaagtgtaattaagc 4751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 18 - 139
Target Start/End: Complemental strand, 4364 - 4242
Alignment:
Q  18 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttt 116  Q
    ||||||| ||||||||||||| ||||| |||  | ||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||    
T  4364 ctaaaactgtcatttctctgcatttttagagtttgaaaataggaggtagaacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttttgtttt 4265  T
Q  117 aaaagggcaggaccagtttcgtg 139  Q
    |||||||||||||||||||||||    
T  4264 aaaagggcaggaccagtttcgtg 4242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 147; Significance: 2e-77; HSPs: 70)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 2 - 176
Target Start/End: Complemental strand, 33109860 - 33109686
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    ||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33109860 agcatagagggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 33109761  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 176  Q
    |||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  33109760 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaaatgtaattaag 33109686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 2 - 176
Target Start/End: Original strand, 46193774 - 46193948
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    ||||||||||||||||||||||| |||| |||||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  46193774 agcatagggggtaggtctaaaactgtcaattctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaataaaaatgataattgaaggacc 46193873  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 176  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  46193874 gttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 46193948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 2 - 177
Target Start/End: Original strand, 11153516 - 11153691
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    ||||||||||||| ||||||||| || |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |    
T  11153516 agcatagggggtaagtctaaaactgttatttctctgcgtttttggagaataaaatggagggtaggacgaaaaatgcaacaaaaatgataattgaaggaac 11153615  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11153616 gttttgttctgttttaaaatggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 11153691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 2 - 176
Target Start/End: Complemental strand, 4219733 - 4219559
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    |||||||||| ||||| |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  4219733 agcataggggataggtttaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggact 4219634  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 176  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  4219633 gttttgttttattttaaaatggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaag 4219559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 8 - 177
Target Start/End: Original strand, 25447611 - 25447780
Alignment:
Q  8 gggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttg 107  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  25447611 gggggtaggtctaaaactgtaatttctctgcgtttttggagaataaaatggagggtaggacgaaaaatgcaacaaaaatgataattgaaagaccgttttg 25447710  T
Q  108 ttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  25447711 ttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaagaccaaaagtgtaattaagc 25447780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 2 - 177
Target Start/End: Complemental strand, 12234505 - 12234330
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    |||||||||||||||| |||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  12234505 agcatagggggtaggtttaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 12234406  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||||| |||||||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||||    
T  12234405 gttttgttctgttttaaaagggcaggaccagtttcgtgaataagccaaaacaagaggaccaaaagtgtaattaagc 12234330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 2 - 177
Target Start/End: Original strand, 15523603 - 15523778
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    ||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  15523603 agcatagggggtaggtctaaaactgtcatttctttgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggacc 15523702  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
     ||||||| | |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  15523703 attttgttttgttttaaaagggcaggaccagtttcgtgagtagcccaaaacacgatgaccaaaagtgtaattaagc 15523778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 2 - 177
Target Start/End: Complemental strand, 25937846 - 25937671
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    |||||| |||||||||||||||| ||||||||||||||||||| ||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||    
T  25937846 agcatatggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatgggggacaggacaaaaaatgcaacaaaaatgataattgaaggacc 25937747  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  25937746 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggctaaaacacgaggaccaaaaatgtaattaagc 25937671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 9 - 176
Target Start/End: Original strand, 38962195 - 38962362
Alignment:
Q  9 ggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgt 108  Q
    |||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38962195 ggggtaggtctaaaactgtcatttctctgcgtttttgaagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgt 38962294  T
Q  109 tctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 176  Q
    ||| |||||||||||| ||||||||||||||| ||| |||||||||||||||||||| ||||||||||    
T  38962295 tctgttttaaaagggccggaccagtttcgtgaatagaccaaaacacgaggaccaaaaatgtaattaag 38962362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 2 - 176
Target Start/End: Complemental strand, 23494619 - 23494445
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    |||||| | |||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  23494619 agcatatgaggtaggtctaaaactgtcatttctctgcgtgtttggagaataaaatggggggtaggacgaaaaatgcaataaaaatgataattgaaggacc 23494520  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 176  Q
    | |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  23494519 gctttgttctgttttaaaagggcaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaag 23494445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 2 - 175
Target Start/End: Original strand, 22434547 - 22434718
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  22434547 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggg-taggacgaaaaatgcaacaaaaatgataattgaatgacc 22434645  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 175  Q
    |||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  22434646 gttttgttctgttt-aaaatggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaa 22434718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 2 - 175
Target Start/End: Original strand, 54995437 - 54995609
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    |||||||| ||||||||||||||  |||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||    
T  54995437 agcataggtggtaggtctaaaactatcatttctttgcgtttttagagaataaaatgggggttaggacgaaaaatgcaacaaaa-tgatacttgaaggacc 54995535  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 175  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  54995536 gttttgttctattttaaaagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 54995609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 2 - 177
Target Start/End: Original strand, 22170306 - 22170480
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    ||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  22170306 agcatagggggtacgtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 22170405  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||| | |||||||| ||||||| || |||||| |||||| |||||||||||||||||||||||||||||||    
T  22170406 gttttgttttgttttaaaaaggcagga-caatttcgtcagtaggtcaaaacacgaggaccaaaagtgtaattaagc 22170480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 2 - 177
Target Start/End: Complemental strand, 48526371 - 48526197
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    |||||||||||||| |||||||| ||||||||||||| ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  48526371 agcatagggggtagatctaaaactgtcatttctctgcatttttggagaataaaatggggg-taggacgaaaaatgcaacaaaaatgataattgaaggacc 48526273  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||||| ||||||||||||||  |||||||| |||||||| ||||||||||| |||||||||||||||||||    
T  48526272 gttttgttctgttttaaaagggcagagccagtttcatgagtaggtcaaaacacgagaaccaaaagtgtaattaagc 48526197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 2 - 177
Target Start/End: Complemental strand, 51020973 - 51020798
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    ||||||||||||||||||||||| ||||||||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  51020973 agcatagggggtaggtctaaaactgtcatttctctacgtttttgaagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggatc 51020874  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||||| ||||||||||||||||||||||| |||| |  ||||||||| ||||| |||||||||||||||||    
T  51020873 gttttgttctgttttaaaagggcaggaccagtttagtgaattagccaaaacatgaggatcaaaagtgtaattaagc 51020798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 2 - 175
Target Start/End: Complemental strand, 45082606 - 45082435
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    ||||||||||||||||||||||  |||||||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  45082606 agcatagggggtaggtctaaaattgtcatttctctgtgtttttggagaataaaatggggg-taggacgaaaaatgcaacaaaaatgataattgaaggacc 45082508  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 175  Q
    ||||||||||||||||||||||||  ||||| ||||||||||| ||||||||||| ||||||||| ||||||||    
T  45082507 gttttgttctattttaaaagggcaaaaccag-ttcgtgagtagaccaaaacacgatgaccaaaagcgtaattaa 45082435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 2 - 175
Target Start/End: Original strand, 2118665 - 2118837
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    |||||||||||||||||||||||  | |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  2118665 agcatagggggtaggtctaaaactattatttctctgcgtttttggagaataaaatgggg-gtaggacgaaaaatgcaacaaaaatgataattgaatgacc 2118763  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 175  Q
    |||||||| | ||||||||||  |||||||||||| |||| |||||||||||||| ||||||||||||||||||    
T  2118764 gttttgttatgttttaaaaggataggaccagtttcatgagcaggccaaaacacgaagaccaaaagtgtaattaa 2118837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 16 - 177
Target Start/End: Complemental strand, 46193568 - 46193406
Alignment:
Q  16 gtctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatt 114  Q
    ||||||||| ||||||||||||||||| | |||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||    
T  46193568 gtctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggacctttttgttctgtt 46193469  T
Q  115 ttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  46193468 ttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 46193406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 18 - 177
Target Start/End: Complemental strand, 22434340 - 22434180
Alignment:
Q  18 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttt 116  Q
    ||||||| ||||||||||||||||| | |||  | ||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  22434340 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatacaacaaaaatgataattgaaggaccgttttgttctgtttt 22434241  T
Q  117 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  22434240 aaaagggcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgtaattaagc 22434180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 26 - 177
Target Start/End: Complemental strand, 25447400 - 25447248
Alignment:
Q  26 gtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggc 124  Q
    ||||||||||||||||| | |||  | ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  25447400 gtcatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggc 25447301  T
Q  125 aggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  25447300 aggaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaagc 25447248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 45082808 - 45082968
Alignment:
Q  18 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttt 116  Q
    ||||||| ||||||||||||||||| | |||  | ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  45082808 ctaaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 45082907  T
Q  117 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  45082908 aaaagggcatgaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaagc 45082968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 19 - 177
Target Start/End: Complemental strand, 15523395 - 15523236
Alignment:
Q  19 taaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttta 117  Q
    |||||| ||||||||||||||||| | |||  | ||||| || ||||||||||||||||||| |||||| |||||||||||||||||||||||| |||||    
T  15523395 taaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggacgaaaaatgcaaaaaaaataataattgaaggaccgttttgttctgtttta 15523296  T
Q  118 aaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15523295 aaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 15523236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 62 - 177
Target Start/End: Original strand, 23494872 - 23494987
Alignment:
Q  62 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacc 161  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  23494872 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacc 23494971  T
Q  162 aaaagtgtaattaagc 177  Q
    ||||||||||||||||    
T  23494972 aaaagtgtaattaagc 23494987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 52 - 177
Target Start/End: Original strand, 12234748 - 12234873
Alignment:
Q  52 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaa 151  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||    
T  12234748 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcatgatcagtttcgtgagtaggccaaaa 12234847  T
Q  152 cacgaggaccaaaagtgtaattaagc 177  Q
    |||||||||||||||| |||||||||    
T  12234848 cacgaggaccaaaagtataattaagc 12234873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 18 - 177
Target Start/End: Complemental strand, 11153307 - 11153147
Alignment:
Q  18 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttt 116  Q
    ||||||| ||||||||||||||||| | | |  | ||||| || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  11153307 ctaaaactgtcatttctctgcgtttctggggtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctatttt 11153208  T
Q  117 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    ||||||||| ||||| ||| ||||||||||||||||||||||||||||||| |||||||||    
T  11153207 aaaagggcatgaccaattttgtgagtaggccaaaacacgaggaccaaaagtataattaagc 11153147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 20470895 - 20471055
Alignment:
Q  18 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttt 116  Q
    |||||||  |||||||||||||||| | |||  | ||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  20470895 ctaaaactttcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 20470994  T
Q  117 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    ||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  20470995 aaaagggaatgaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagc 20471055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 52 - 175
Target Start/End: Complemental strand, 54995195 - 54995072
Alignment:
Q  52 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaa 151  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||| |    
T  54995195 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggtaggactagtttcgtgagtaggccaata 54995096  T
Q  152 cacgaggaccaaaagtgtaattaa 175  Q
    ||||||||||||||||||||||||    
T  54995095 cacgaggaccaaaagtgtaattaa 54995072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 18 - 175
Target Start/End: Original strand, 4219943 - 4220101
Alignment:
Q  18 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttt 116  Q
    ||||||| || ||||||||||||||||  ||  | ||||| || |||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||    
T  4219943 ctaaaactgttatttctctgcgtttttgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaatgaccattttgttctgtttt 4220042  T
Q  117 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 175  Q
    ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  4220043 aaaagagcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 4220101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 18 - 175
Target Start/End: Original strand, 48526565 - 48526723
Alignment:
Q  18 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttt 116  Q
    ||||||| |||||||||||| |||| | |||  | ||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  48526565 ctaaaactgtcatttctctgtgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaagtgataattgaaggaccgttttgttctgtttt 48526664  T
Q  117 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 175  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||||||| |||||||    
T  48526665 aaaagggcaagaccagtttcgtgagtagaccaaaacacgaggaccaaaagtataattaa 48526723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 52 - 177
Target Start/End: Original strand, 25938090 - 25938215
Alignment:
Q  52 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaa 151  Q
    ||||| || |||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  25938090 aaaataggaggtaggacaaaaaatgcaacaaaaatgataattgaaggactgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaa 25938189  T
Q  152 cacgaggaccaaaagtgtaattaagc 177  Q
    ||| ||||||||||||||||||||||    
T  25938190 cacaaggaccaaaagtgtaattaagc 25938215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 52 - 177
Target Start/End: Original strand, 33109883 - 33110008
Alignment:
Q  52 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaa 151  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||| |||||||||    
T  33109883 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagcaggccaaaa 33109982  T
Q  152 cacgaggaccaaaagtgtaattaagc 177  Q
    || |||||||||||||||||||||||    
T  33109983 catgaggaccaaaagtgtaattaagc 33110008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 52 - 176
Target Start/End: Complemental strand, 2118419 - 2118295
Alignment:
Q  52 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaa 151  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||  ||||||| | ||||||||||||||||||| |||||||||||||||||||    
T  2118419 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggactattttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaa 2118320  T
Q  152 cacgaggaccaaaagtgtaattaag 176  Q
    ||| |||||||||||||||||||||    
T  2118319 cacaaggaccaaaagtgtaattaag 2118295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 2 - 110
Target Start/End: Original strand, 12503805 - 12503913
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  12503805 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtatgacgaaaaatgcaacaaaaatgatacttgaaggacc 12503904  T
Q  102 gttttgttc 110  Q
    |||||||||    
T  12503905 gttttgttc 12503913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 52 - 175
Target Start/End: Complemental strand, 18751725 - 18751602
Alignment:
Q  52 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaa 151  Q
    ||||| || ||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| |||||||||  ||||||||||||||    
T  18751725 aaaataggaggtgggacgaaaaatgcaacaaaaatgatatttgaaggaccgttttgttctgttttaaaagggcatgaccagttttatgagtaggccaaaa 18751626  T
Q  152 cacgaggaccaaaagtgtaattaa 175  Q
    ||||||||||||||||||||||||    
T  18751625 cacgaggaccaaaagtgtaattaa 18751602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 28 - 177
Target Start/End: Original strand, 51021190 - 51021339
Alignment:
Q  28 catttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcag 126  Q
    ||||||||||||||| | |||  | ||||| || |||||||||||||||||||||||| |||||||| ||||||||||||||| | ||||||||||||||    
T  51021190 catttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaa-tgataattaaaggaccgttttgttgtgttttaaaagggcag 51021288  T
Q  127 gaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  51021289 gaccaatttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagc 51021339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 36 - 177
Target Start/End: Original strand, 20958264 - 20958403
Alignment:
Q  36 tgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagttt 135  Q
    ||||||||| ||| |||||||||||| |||||| |||||||||||||||||||||||||||||||   |||||||| ||||||||||||||||||| |||    
T  20958264 tgcgtttttggaggataaaatggggg-taggac-aaaaatgcaacaaaaatgataattgaaggacatatttgttctgttttaaaagggcaggaccatttt 20958361  T
Q  136 cgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||||||||||| |||||||| ||||||||||||||||    
T  20958362 cgtgagtaggccaaaatacgaggactaaaagtgtaattaagc 20958403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 64 - 176
Target Start/End: Original strand, 18763951 - 18764063
Alignment:
Q  64 aggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaa 163  Q
    ||||||||||||||||||||||||||| ||||| |||| ||||||||| |||||||||| || |||||||||||||||||||||||||||||||||||||    
T  18763951 aggacgaaaaatgcaacaaaaatgatacttgaatgaccattttgttctgttttaaaaggacatgaccagtttcgtgagtaggccaaaacacgaggaccaa 18764050  T
Q  164 aagtgtaattaag 176  Q
    |||||||||||||    
T  18764051 aagtgtaattaag 18764063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 37 - 177
Target Start/End: Original strand, 44892552 - 44892692
Alignment:
Q  37 gcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttc 136  Q
    |||||||| ||| ||||||||| ||||||||||||||||||||||||||  ||||||||| ||| |||||||||| |||||||| ||||| |||| ||||    
T  44892552 gcgtttttggaggataaaatggagggtaggacgaaaaatgcaacaaaaaatataattgaaagacagttttgttctgttttaaaatggcagaaccattttc 44892651  T
Q  137 gtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    ||||||||| ||||||||||||||||||| | |||||||||    
T  44892652 gtgagtaggtcaaaacacgaggaccaaaaatataattaagc 44892692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 61 - 177
Target Start/End: Original strand, 35363028 - 35363145
Alignment:
Q  61 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttt-aaaagggcaggaccagtttcgtgagtaggccaaaacacgagga 159  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||| | |||| ||||| |||| ||||||||||||||||||||||||||||||||    
T  35363028 ggtagaacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttttttttttaaaagagcagaaccagtttcgtgagtaggccaaaacacgagga 35363127  T
Q  160 ccaaaagtgtaattaagc 177  Q
     |||||||||||||||||    
T  35363128 tcaaaagtgtaattaagc 35363145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 40 - 160
Target Start/End: Original strand, 43281198 - 43281317
Alignment:
Q  40 ttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtg 139  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||  ||||||||| |||||||| |||| ||||| |||||||    
T  43281198 ttttttgaggataaaatggggggtaggacgaaaaatgcaacaaaaat-ataattgaagaacatttttgttctgttttaaaatggcatgaccattttcgtg 43281296  T
Q  140 agtaggccaaaacacgaggac 160  Q
    |||||||||||||||||||||    
T  43281297 agtaggccaaaacacgaggac 43281317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 37 - 177
Target Start/End: Complemental strand, 48293735 - 48293595
Alignment:
Q  37 gcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttc 136  Q
    |||||||| ||||||||||||| ||| |||| ||||||||||||||||||||||||||||| ||  ||||||| | |||||||  | ||||| || ||||    
T  48293735 gcgtttttggagaataaaatggagggcaggatgaaaaatgcaacaaaaatgataattgaagaacaattttgttttgttttaaagagacaggatcaatttc 48293636  T
Q  137 gtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  48293635 gtgagtaagccaaaacacgaggaccaaaagtgtaattaagc 48293595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 37 - 160
Target Start/End: Original strand, 43243685 - 43243807
Alignment:
Q  37 gcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttc 136  Q
    |||||||| ||| ||||||||||| ||||||| |||||||||||||||||||||||||||| ||  ||||||||| ||||||||||||| ||||| ||||    
T  43243685 gcgtttttggaggataaaatgggg-gtaggacaaaaaatgcaacaaaaatgataattgaagaacaattttgttctgttttaaaagggcatgaccattttc 43243783  T
Q  137 gtgagtaggccaaaacacgaggac 160  Q
    ||||||||||||||||||||||||    
T  43243784 gtgagtaggccaaaacacgaggac 43243807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 37 - 180
Target Start/End: Complemental strand, 44890658 - 44890515
Alignment:
Q  37 gcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttc 136  Q
    |||||||||||| ||||||||||||||| || |||||||||||||||||  |||||| |||||   ||||||||| ||||||||||||| ||||| ||||    
T  44890658 gcgttttttgaggataaaatggggggtatgatgaaaaatgcaacaaaaaatataattaaaggatatttttgttctgttttaaaagggcatgaccattttc 44890559  T
Q  137 gtgagtaggccaaaacacgaggaccaaaagtgtaattaagcatt 180  Q
    |||| |||| |||||||| |||||||||| ||||||||||||||    
T  44890558 gtgaataggtcaaaacacaaggaccaaaattgtaattaagcatt 44890515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 36 - 175
Target Start/End: Original strand, 48713749 - 48713888
Alignment:
Q  36 tgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagttt 135  Q
    ||||||||| ||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||  ||||||||| ||||||||| ||| ||||| |||    
T  48713749 tgcgtttttggaggataaaatggaggggaggacgaaaaatgcaacaaaaatgataattgaaggacaattttgttctgttttaaaagagcatgaccatttt 48713848  T
Q  136 cgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 175  Q
    | ||||||||| |||||||||| |  ||||||||||||||    
T  48713849 catgagtaggctaaaacacgagaattaaaagtgtaattaa 48713888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 40 - 171
Target Start/End: Complemental strand, 20957327 - 20957196
Alignment:
Q  40 ttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtg 139  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||  ||||||| | ||||||||| | | ||||| |||||||    
T  20957327 ttttttgagaataaaatggggagtatgacgaaaaatgcaacaaaattgataattgaaggacaattttgttgtgttttaaaagagtatgaccattttcgtg 20957228  T
Q  140 agtaggccaaaacacgaggaccaaaagtgtaa 171  Q
    |||| |||||||| |||||||||||| |||||    
T  20957227 agtaagccaaaactcgaggaccaaaaatgtaa 20957196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 50 - 175
Target Start/End: Complemental strand, 16691064 - 16690939
Alignment:
Q  50 ataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaa 149  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||   ||||||| | |||||||  |||||||||| ||||||||||||  |||    
T  16691064 ataaaatcgggggtaggacgaaaaatgcaacaaaaatgataattgaaggataattttgttttgttttaaagaggcaggaccattttcgtgagtagatcaa 16690965  T
Q  150 aacacgaggaccaaaagtgtaattaa 175  Q
    ||||| |||||||||| |||||||||    
T  16690964 aacacaaggaccaaaaatgtaattaa 16690939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 18 - 161
Target Start/End: Complemental strand, 12503597 - 12503453
Alignment:
Q  18 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttt 116  Q
    ||||||| || |||||||||||||| | |||  | ||||| || ||||||||||||||||||||||||||||||||||||||||  ||||||||| ||||    
T  12503597 ctaaaactgtaatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggacaattttgttctgtttt 12503498  T
Q  117 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacc 161  Q
    |||| ||| ||| |||||||||||||| | |||||||||||||||    
T  12503497 aaaatggcgggatcagtttcgtgagtaagtcaaaacacgaggacc 12503453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 50 - 177
Target Start/End: Complemental strand, 48708423 - 48708296
Alignment:
Q  50 ataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaa 149  Q
    |||||||| | |||||||  | ||||||||||||||||||||||||||||| |||||||| | |||||||||||||||| || |||||||  ||||||||    
T  48708423 ataaaatgagtggtaggattataaatgcaacaaaaatgataattgaaggacagttttgttgtgttttaaaagggcaggatcattttcgtggttaggccaa 48708324  T
Q  150 aacacgaggaccaaaagtgtaattaagc 177  Q
    |||||  |||||||||||||||||||||    
T  48708323 aacacatggaccaaaagtgtaattaagc 48708296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 52 - 177
Target Start/End: Original strand, 10258306 - 10258431
Alignment:
Q  52 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaa 151  Q
    ||||| ||||||| ||| |||| ||||||||||||||||||||||  ||  ||||  ||| ||||||||||||||||||| |||| ||||||||||| ||    
T  10258306 aaaatagggggtaagactaaaactgcaacaaaaatgataattgaaaaacaattttaatctgttttaaaagggcaggaccaatttcctgagtaggccacaa 10258405  T
Q  152 cacgaggaccaaaagtgtaattaagc 177  Q
    ||||||||||||||||||||||||||    
T  10258406 cacgaggaccaaaagtgtaattaagc 10258431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 37 - 177
Target Start/End: Original strand, 48294946 - 48295087
Alignment:
Q  37 gcgttttttgagaataaaatggggggtaggacg-aaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagttt 135  Q
    |||||||| ||  |||||||||||||||||||| ||||||||||||||||||||||||||| |||  ||||||| | |||||||  |||| ||||| |||    
T  48294946 gcgtttttggaagataaaatggggggtaggacggaaaaatgcaacaaaaatgataattgaatgacaattttgttgtgttttaaagaggcaagaccaattt 48295045  T
Q  136 cgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||||  |||||||||| |||||||| |||||||||||    
T  48295046 cgtgagtagatcaaaacacgatgaccaaaaatgtaattaagc 48295087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 50 - 177
Target Start/End: Original strand, 16691489 - 16691615
Alignment:
Q  50 ataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaa 149  Q
    |||||||||| |||| ||||||||||||||||||||| |||||| ||||||  ||||||| |  ||||||  |||||||||| ||||||||||||| |||    
T  16691489 ataaaatgggaggtatgacgaaaaatgcaacaaaaataataattaaaggacaattttgttat-gtttaaagaggcaggaccattttcgtgagtaggtcaa 16691587  T
Q  150 aacacgaggaccaaaagtgtaattaagc 177  Q
    |||||  ||| |||||||||||||||||    
T  16691588 aacacagggatcaaaagtgtaattaagc 16691615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 108 - 177
Target Start/End: Original strand, 16318251 - 16318320
Alignment:
Q  108 ttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||| |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  16318251 ttctgttttaaaagggcaggatcagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 16318320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 2 - 177
Target Start/End: Complemental strand, 17504149 - 17503975
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    ||||||||||||||||||||||| ||||||||||| ||||| | |||   ||||| || |||||||| |||| ||||| ||| |||||| ||  |||||     
T  17504149 agcatagggggtaggtctaaaactgtcatttctctacgtttctggagttgaaaataggaggtaggactaaaactgcaaaaaacatgatagtt-taggacg 17504051  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    ||| ||||| |||| |||  |||||||||| |||||||||  || |||||  |||||||||| ||| |||||||||    
T  17504050 gttatgttccatttgaaagaggcaggaccattttcgtgagatggtcaaaatgcgaggaccaacagtataattaagc 17503975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 43242411 - 43242328
Alignment:
Q  37 gcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaa 120  Q
    |||||||| ||  ||||||| || ||||||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||    
T  43242411 gcgtttttggatgataaaattggaggtaggacgaaaaatgcaaaaaaaatgataattgaatgaccgttttgttctgttttaaaa 43242328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 2 - 69
Target Start/End: Original strand, 18751971 - 18752038
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacg 69  Q
    ||||||||||||||||||||||| || |||||||||| ||||| ||||||||||| ||||||||||||    
T  18751971 agcatagggggtaggtctaaaactgttatttctctgcatttttggagaataaaatagggggtaggacg 18752038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 70 - 177
Target Start/End: Complemental strand, 55189636 - 55189529
Alignment:
Q  70 aaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgt 169  Q
    ||||||| | ||||||||||||||||| |||  |||||||||||||||||||||||  |||| |||  ||| |||| ||||||||||||| ||||| | |    
T  55189636 aaaaatgtagcaaaaatgataattgaaagacaattttgttctattttaaaagggcataaccatttttatgaataggtcaaaacacgaggatcaaaaatat 55189537  T
Q  170 aattaagc 177  Q
    ||||||||    
T  55189536 aattaagc 55189529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 51 - 177
Target Start/End: Original strand, 30597939 - 30598064
Alignment:
Q  51 taaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaa 150  Q
    |||||| |||| |||||| |||| |||||||||||| |||||| | ||||  |||||||| |||| |||  | ||| |||| || ||||||| || ||||    
T  30597939 taaaataggggttaggaccaaaagtgcaacaaaaat-ataatttagggacgattttgttcgatttaaaagagacagaaccaattccgtgagttggtcaaa 30598037  T
Q  151 acacgaggaccaaaagtgtaattaagc 177  Q
    |||||||||||||||||||||| ||||    
T  30598038 acacgaggaccaaaagtgtaatcaagc 30598064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 37 - 117
Target Start/End: Original strand, 44220781 - 44220861
Alignment:
Q  37 gcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttta 117  Q
    |||||||| ||| |||||||  ||||||| |||||||||| |||||||||||||| ||||||||  ||||||||| |||||    
T  44220781 gcgtttttggaggataaaattaggggtagaacgaaaaatgaaacaaaaatgataaatgaaggacaattttgttctgtttta 44220861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 42
Target Start/End: Original strand, 17504329 - 17504369
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttt 42  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  17504329 agcatagggggtaggtctaaaactgtcatttctctgcgttt 17504369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 35193483 - 35193443
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttt 42  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  35193483 agcatagggggtaggtctaaaactgtcatttctctgcgttt 35193443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 52 - 179
Target Start/End: Complemental strand, 23986646 - 23986519
Alignment:
Q  52 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaa 151  Q
    |||||||||| |||||| |||| ||||| ||| |||||| || | |||| ||||||||| |||| |||  | || ||||| |||||||||  || |||||    
T  23986646 aaaatgggggttaggactaaaactgcaaaaaacatgatagtttagggacagttttgttcgatttgaaagagacatgaccattttcgtgagctggtcaaaa 23986547  T
Q  152 cacgaggaccaaaagtgtaattaagcat 179  Q
       |||||||||||||| ||||||||||    
T  23986546 tgtgaggaccaaaagtgaaattaagcat 23986519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 103 - 177
Target Start/End: Original strand, 55677429 - 55677503
Alignment:
Q  103 ttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||| |||| |||  || ||||||| |||||||||| || ||||| || ||||||||||||||||||||||    
T  55677429 ttttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatacaaggaccaaaagtgtaattaagc 55677503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 59 - 176
Target Start/End: Original strand, 24336190 - 24336307
Alignment:
Q  59 ggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgagg 158  Q
    |||||||||| ||||  |||| ||| ||||||||| | | || ||||||||| |||| |||  |||||||||| |||||||||   | |||||  |||||    
T  24336190 ggggtaggactaaaagagcaaaaaacatgataatttaggaacggttttgttcgatttgaaagaggcaggaccattttcgtgagcttgtcaaaatgcgagg 24336289  T
Q  159 accaaaagtgtaattaag 176  Q
    | ||||||||||||||||    
T  24336290 atcaaaagtgtaattaag 24336307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 40 - 175
Target Start/End: Original strand, 55191181 - 55191318
Alignment:
Q  40 ttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatga---taattgaaggaccgttttgttctattttaaaagggcaggaccagtttc 136  Q
    ||||| ||| ||||||||  || ||| ||||||| ||||||||||||||   ||||| || |||  |||| ||||||||||||| |||| ||||| ||||    
T  55191181 tttttagaggataaaatgatggttagaacgaaaagtgcaacaaaaatgatagtaattaaaagacaattttattctattttaaaa-ggcatgaccattttc 55191279  T
Q  137 gtgagtaggccaaaacacgaggaccaaaagtgtaattaa 175  Q
     |||||| | ||||||||||  ||||||| | |||||||    
T  55191280 atgagtatgtcaaaacacgaaaaccaaaattataattaa 55191318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 125 - 176
Target Start/End: Complemental strand, 44219428 - 44219377
Alignment:
Q  125 aggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 176  Q
    ||||||| |||||||||| ||  |||| ||||||||||||||||||||||||    
T  44219428 aggaccaatttcgtgagttggttaaaatacgaggaccaaaagtgtaattaag 44219377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 85 - 175
Target Start/End: Complemental strand, 229254 - 229164
Alignment:
Q  85 atgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 175  Q
    |||||| || ||||||  |||||||| |||| |||  |||| ||||| ||||| |||  || ||||| |||||||||||||||||||||||    
T  229254 atgatagtttaaggacgattttgttcaatttgaaagaggcaagaccattttcgcgagctggtcaaaatacgaggaccaaaagtgtaattaa 229164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 177
Target Start/End: Original strand, 46737126 - 46737200
Alignment:
Q  103 ttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||| |||| |||  || ||||||| |||||||||| || |||||  | ||||||||||||||||||||||    
T  46737126 ttttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagc 46737200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 176
Target Start/End: Original strand, 34789854 - 34789927
Alignment:
Q  103 ttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 176  Q
    |||||||| |||| |||  || ||||||| |||||||||| || |||||  | |||||||||||||||||||||    
T  34789854 ttttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaag 34789927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 35
Target Start/End: Complemental strand, 40160269 - 40160236
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctc 35  Q
    ||||||||||||||||||||||| ||||||||||    
T  40160269 agcatagggggtaggtctaaaactgtcatttctc 40160236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 176
Target Start/End: Complemental strand, 54440646 - 54440573
Alignment:
Q  103 ttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 176  Q
    |||||||| |||| |||  || ||||||| |||||||||| || |||||  | |||||||||||||||||||||    
T  54440646 ttttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaag 54440573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 144; Significance: 2e-75; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 2 - 177
Target Start/End: Original strand, 134042 - 134217
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |    
T  134042 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgttaattgaaggatc 134141  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||||| | ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  134142 gttttgttctgtattaaaagggcatgactagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 134217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 144; Significance: 2e-75; HSPs: 4)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 2 - 177
Target Start/End: Complemental strand, 64478 - 64303
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  64478 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtatgacgaaaaatgcaacaaaaatgataattgaaggacc 64379  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||||| |||||||||| ||||| |||||||||||||| | |||||||||||||||||||||||||||||||    
T  64378 gttttgttctgttttaaaaggtcaggatcagtttcgtgagtatgtcaaaacacgaggaccaaaagtgtaattaagc 64303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 63 - 175
Target Start/End: Original strand, 64735 - 64847
Alignment:
Q  63 taggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacca 162  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  64735 taggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaagggcgggaccagtttcgtgagtatgccaaaacacgaggacca 64834  T
Q  163 aaagtgtaattaa 175  Q
    |||||||||||||    
T  64835 aaagtgtaattaa 64847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 2 - 176
Target Start/End: Original strand, 205738 - 205911
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    ||||||||||||||||||||||| | ||||||||||||||||| |||   ||||| ||  ||||||| |||| ||||| ||| |||||| || | ||||     
T  205738 agcatagggggtaggtctaaaactgccatttctctgcgtttttggagttgaaaataggacgtaggactaaaactgcaa-aaacatgatagtttagggacg 205836  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 176  Q
    ||||||||| |||| |||  |||||||||| |||||||||| || |||||   |||||| |||||||||||||||    
T  205837 gttttgttcgatttgaaagaggcaggaccattttcgtgagttggtcaaaatgtgaggactaaaagtgtaattaag 205911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 81 - 177
Target Start/End: Original strand, 210786 - 210882
Alignment:
Q  81 aaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||||| || | |||| ||||||||| |||| |||  |||||||||| |||| ||||| || |||||   |||||||||||||||||||||||    
T  210786 aaaaatgatagtttagggacggttttgttcgatttgaaagaggcaggaccattttcatgagttggtcaaaatgtgaggaccaaaagtgtaattaagc 210882  T

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Target: scaffold1223 (Bit Score: 135; Significance: 4e-70; HSPs: 2)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 2 - 176
Target Start/End: Complemental strand, 928 - 755
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    |||||| |||||| ||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  928 agcataaggggtatgtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaa-tgataattgaaggacc 830  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 176  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||    
T  829 gttttgttctgttttaaaagggcaggaccagtatcgtgagtaggccaaaacacgaagaccaaaagtgtaattaag 755  T

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Target: scaffold1223; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 52 - 177
Target Start/End: Original strand, 1160 - 1285
Alignment:
Q  52 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaa 151  Q
    ||||| || |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  1160 aaaataggaggtaggacgaaagatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaagccaaaa 1259  T
Q  152 cacgaggaccaaaagtgtaattaagc 177  Q
    ||||||||| ||||||||||||||||    
T  1260 cacgaggactaaaagtgtaattaagc 1285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 126; Significance: 8e-65; HSPs: 2)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 2 - 175
Target Start/End: Original strand, 10242 - 10414
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    |||||||||||||||| |||||| ||||||||||||  ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  10242 agcatagggggtaggtttaaaactgtcatttctctgaatttttggagaataaaatgggg-gtaggacgaaaaatgcaacaaaaatgataattgaaggacc 10340  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 175  Q
    |||||||||| ||||||||||| |  ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  10341 gttttgttctgttttaaaagggaaacaccagtttcgtgagtagaccaaaacacgaggaccaaaagtgtaattaa 10414  T

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Target: scaffold0432; HSP #2
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 71 - 175
Target Start/End: Complemental strand, 10039 - 9935
Alignment:
Q  71 aaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgta 170  Q
    |||||| ||||||| |||||||||||||||| ||||||||||| ||||||||||| || ||||||||||| ||||| |||||||||||||||||| ||||    
T  10039 aaaatgtaacaaaattgataattgaaggaccattttgttctatcttaaaagggcaagatcagtttcgtgaataggctaaaacacgaggaccaaaaatgta 9940  T
Q  171 attaa 175  Q
    |||||    
T  9939 attaa 9935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 125; Significance: 3e-64; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 2 - 177
Target Start/End: Original strand, 42528 - 42702
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||    
T  42528 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatgggg-gtaggacgaaaaatgaaacaaaaatgataactgaaggacc 42626  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    |||||||||| |||||||||||||| | ||||||| ||||||| ||||||||||||| |||||||| |||||||||    
T  42627 gttttgttctgttttaaaagggcagaatcagtttcctgagtagaccaaaacacgaggnccaaaagtataattaagc 42702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 9 - 175
Target Start/End: Complemental strand, 42339 - 42172
Alignment:
Q  9 ggggtaggtctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttg 107  Q
    |||||||||||||||| ||||||||||||||||| |  ||  | ||||| || |||| ||| ||||||||||||||||||||||||||| ||||||||||    
T  42339 ggggtaggtctaaaactgtcatttctctgcgtttctgaagtttgaaaataggaggtatgacaaaaaatgcaacaaaaatgataattgaatgaccgttttg 42240  T
Q  108 ttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 175  Q
    |||| |||||||| ||||||| ||||||||||| ||| |||||||||||| || ||||||||||||||    
T  42239 ttctgttttaaaatggcaggatcagtttcgtgattagaccaaaacacgagaactaaaagtgtaattaa 42172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 122; Significance: 2e-62; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 2 - 159
Target Start/End: Complemental strand, 10797 - 10640
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    ||||||||||||| ||||||||| ||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||    
T  10797 agcatagggggtacgtctaaaactgtcatttctctgcatttttggagaataaaatggagggtaggacgaaaaatgcaacgaaaatgatacttgaaggacc 10698  T
Q  102 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgagga 159  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  10697 gttttgttctgttttaaaagggcaggaccagtttcatgagtaggccaaaacacgagga 10640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417; HSP #2
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 52 - 177
Target Start/End: Original strand, 11042 - 11167
Alignment:
Q  52 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaa 151  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||    
T  11042 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccagtttcgtaagtaggccaaaa 11141  T
Q  152 cacgaggaccaaaagtgtaattaagc 177  Q
    ||||||||||||||||||||||||||    
T  11142 cacgaggaccaaaagtgtaattaagc 11167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 111; Significance: 7e-56; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 11 - 177
Target Start/End: Complemental strand, 19001 - 18836
Alignment:
Q  11 ggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttc 110  Q
    |||| ||||||||| || |||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||     
T  19001 ggtaagtctaaaactgttatttctctgcgtttttggagaataaaatggggg-taggatgaaaaatgcaacaaaaatgataattgaagcaccgttttgtta 18903  T
Q  111 tattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    | ||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||| ||||    
T  18902 tgttttaaaagggcaagaccagtttcgtgagtaggccaaaacagaaggaccaaaagtgtaatgaagc 18836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 81 - 177
Target Start/End: Original strand, 19069 - 19165
Alignment:
Q  81 aaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  19069 aaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggacaagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 19165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 95; Significance: 3e-46; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 52 - 174
Target Start/End: Original strand, 28662 - 28784
Alignment:
Q  52 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaa 151  Q
    ||||||||||| |||||||||| |||||||||||||||||||||| |||||||||||||| ||||||||||||| |||||||||||| ||||||||||||    
T  28662 aaaatggggggaaggacgaaaactgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaa 28761  T
Q  152 cacgaggaccaaaagtgtaatta 174  Q
    ||||| |||||||||||||||||    
T  28762 cacgatgaccaaaagtgtaatta 28784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 93; Significance: 4e-45; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 2 - 110
Target Start/End: Complemental strand, 16672 - 16564
Alignment:
Q  2 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 101  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  16672 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtatgacgaaaaatgcaacaaaaatgatacttgaaggacc 16573  T
Q  102 gttttgttc 110  Q
    |||||||||    
T  16572 gttttgttc 16564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 18 - 161
Target Start/End: Original strand, 16880 - 17024
Alignment:
Q  18 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttt 116  Q
    ||||||| || |||||||||||||| | |||  | ||||| || ||||||||||||||||||||||||||||||||||||||||  ||||||||| ||||    
T  16880 ctaaaactgtaatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggacaattttgttctgtttt 16979  T
Q  117 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacc 161  Q
    |||| ||| ||| |||||||||||||| | |||||||||||||||    
T  16980 aaaatggcgggatcagtttcgtgagtaagtcaaaacacgaggacc 17024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1585 (Bit Score: 91; Significance: 6e-44; HSPs: 1)
Name: scaffold1585
Description:

Target: scaffold1585; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 36 - 178
Target Start/End: Complemental strand, 709 - 567
Alignment:
Q  36 tgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagttt 135  Q
    ||||||||| ||| || ||||||| |||  |||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||||| || || |||    
T  709 tgcgtttttggaggatcaaatgggaggtgagacgaaaaatacaacaaaaatgataattgaaggacagttttgttctgttttaaaagggcatgatcatttt 610  T
Q  136 cgtgagtaggccaaaacacgaggaccaaaagtgtaattaagca 178  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  609 cgtgagtaggccaaaacacgaggatcaaaagtgtaattaagca 567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 83; Significance: 4e-39; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 37 - 175
Target Start/End: Original strand, 61862 - 62000
Alignment:
Q  37 gcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttc 136  Q
    |||||||| ||| | ||||||||||||||||||||||||  ||||||||||||| ||||| ||   ||||||||||||||||||||| ||||||| ||||    
T  61862 gcgtttttggaggacaaaatggggggtaggacgaaaaatataacaaaaatgatatttgaatgatgattttgttctattttaaaagggtaggaccattttc 61961  T
Q  137 gtgagtaggccaaaacacgaggaccaaaagtgtaattaa 175  Q
    |||||||| |||||||||||||| |||||||||||||||    
T  61962 gtgagtagaccaaaacacgaggatcaaaagtgtaattaa 62000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 104 - 177
Target Start/End: Complemental strand, 61102 - 61029
Alignment:
Q  104 tttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 177  Q
    ||||||||||||||||| ||||||| || ||||||||||||||||||||||||||| |||||||||| ||||||    
T  61102 tttgttctattttaaaatggcaggatcattttcgtgagtaggccaaaacacgaggatcaaaagtgtacttaagc 61029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1696 (Bit Score: 74; Significance: 9e-34; HSPs: 1)
Name: scaffold1696
Description:

Target: scaffold1696; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 37 - 174
Target Start/End: Complemental strand, 589 - 454
Alignment:
Q  37 gcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttc 136  Q
    |||||||||||| |||||||||| | ||||||||||||||||||||||||||||||||||||||  || |||| | |||||||||  || ||||| ||||    
T  589 gcgttttttgaggataaaatgggtg-taggacgaaaaatgcaacaaaaatgataattgaaggacgattatgttttgttttaaaagatcatgaccattttc 491  T
Q  137 gtgagtaggccaaaacacgaggaccaaaagtgtaatta 174  Q
    |||||||||||||||||||| |||||||| ||||||||    
T  490 gtgagtaggccaaaacacgaagaccaaaa-tgtaatta 454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 69; Significance: 9e-31; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 75 - 175
Target Start/End: Original strand, 8451 - 8551
Alignment:
Q  75 tgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaatta 174  Q
    ||||||||||||||||||||||||||||||||| | | ||||||||||| |||||||||||||| ||||| |||||||| || |||||||||||||||||    
T  8451 tgcaacaaaaatgataattgaaggaccgttttgctgtgttttaaaagggtaggaccagtttcgtaagtagaccaaaacatgaagaccaaaagtgtaatta 8550  T
Q  175 a 175  Q
    |    
T  8551 a 8551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 36 - 129
Target Start/End: Original strand, 7691 - 7784
Alignment:
Q  36 tgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggac 129  Q
    ||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||| |||| ||| |||||||||| ||||||||||| |||||    
T  7691 tgcgtttttggaggataaaatagggggtaggacgaaaaatgcaacaaaaatgataactgaacgacagttttgttctgttttaaaagggaaggac 7784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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