View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2351_low_13 (Length: 325)

Name: NF2351_low_13
Description: NF2351
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2351_low_13
NF2351_low_13
[»] chr3 (54 HSPs)
chr3 (88-325)||(17960110-17960347)
chr3 (109-312)||(11328784-11328987)
chr3 (81-322)||(16880339-16880581)
chr3 (109-281)||(47784580-47784752)
chr3 (109-322)||(39656742-39656953)
chr3 (81-312)||(17139734-17139965)
chr3 (142-322)||(30207432-30207613)
chr3 (109-325)||(38810833-38811042)
chr3 (106-322)||(12953180-12953397)
chr3 (110-322)||(14059035-14059244)
chr3 (109-280)||(11882038-11882207)
chr3 (146-318)||(12560092-12560263)
chr3 (115-282)||(17191797-17191965)
chr3 (115-281)||(3576261-3576428)
chr3 (109-269)||(15876329-15876490)
chr3 (115-273)||(13301294-13301451)
chr3 (115-273)||(13311950-13312107)
chr3 (142-273)||(48421843-48421972)
chr3 (115-282)||(17204937-17205105)
chr3 (163-325)||(14080722-14080884)
chr3 (88-246)||(15520341-15520497)
chr3 (153-302)||(9590617-9590765)
chr3 (109-222)||(12487596-12487709)
chr3 (224-322)||(12488659-12488757)
chr3 (142-282)||(14527932-14528071)
chr3 (177-282)||(3578344-3578447)
chr3 (142-279)||(11060859-11060994)
chr3 (174-276)||(34560130-34560231)
chr3 (109-213)||(15550924-15551028)
chr3 (142-282)||(35123951-35124090)
chr3 (177-282)||(14295695-14295797)
chr3 (177-282)||(14301322-14301424)
chr3 (183-262)||(51961030-51961107)
chr3 (179-282)||(14298677-14298778)
chr3 (179-282)||(14304304-14304405)
chr3 (116-219)||(12031826-12031932)
chr3 (109-282)||(50111871-50112042)
chr3 (142-282)||(6146621-6146760)
chr3 (177-218)||(55440746-55440787)
chr3 (142-213)||(6154183-6154255)
chr3 (142-213)||(12349391-12349463)
chr3 (142-213)||(17100975-17101047)
chr3 (142-213)||(17101660-17101732)
chr3 (142-213)||(17522742-17522814)
chr3 (182-282)||(22144165-22144263)
chr3 (142-213)||(40939449-40939521)
chr3 (179-282)||(54424268-54424369)
chr3 (142-282)||(16181800-16181937)
chr3 (182-282)||(317403-317500)
chr3 (142-213)||(38528050-38528121)
chr3 (182-213)||(13817833-13817864)
chr3 (182-213)||(16995954-16995985)
chr3 (252-322)||(15517847-15517917)
chr3 (239-282)||(55440795-55440839)
[»] chr1 (23 HSPs)
chr1 (109-325)||(36356111-36356327)
chr1 (81-322)||(16646128-16646369)
chr1 (93-322)||(16656854-16657083)
chr1 (109-325)||(38033491-38033708)
chr1 (93-322)||(20955243-20955470)
chr1 (109-322)||(22829245-22829456)
chr1 (109-322)||(19603313-19603521)
chr1 (115-322)||(27675012-27675219)
chr1 (111-312)||(51627486-51627685)
chr1 (115-321)||(20177392-20177599)
chr1 (115-312)||(17609154-17609351)
chr1 (115-282)||(22143186-22143352)
chr1 (93-301)||(37233663-37233870)
chr1 (141-322)||(13376709-13376890)
chr1 (142-282)||(21195270-21195409)
chr1 (179-279)||(27329656-27329754)
chr1 (179-282)||(22403000-22403101)
chr1 (109-282)||(35522172-35522343)
chr1 (142-206)||(8537762-8537825)
chr1 (142-206)||(8603001-8603064)
chr1 (142-213)||(35055079-35055151)
chr1 (178-213)||(9783953-9783988)
chr1 (182-213)||(20346347-20346378)
[»] chr2 (27 HSPs)
chr2 (109-325)||(3065-3281)
chr2 (109-317)||(24294341-24294549)
chr2 (110-322)||(31145999-31146212)
chr2 (116-322)||(68208-68413)
chr2 (93-322)||(722607-722833)
chr2 (120-279)||(22775044-22775203)
chr2 (120-279)||(22780422-22780581)
chr2 (117-322)||(23821467-23821670)
chr2 (117-322)||(23830546-23830749)
chr2 (115-282)||(19666784-19666950)
chr2 (115-281)||(43646150-43646318)
chr2 (142-282)||(19668961-19669100)
chr2 (142-325)||(22579715-22579896)
chr2 (110-322)||(25305647-25305860)
chr2 (109-283)||(27262058-27262232)
chr2 (81-282)||(24571082-24571283)
chr2 (177-283)||(25602279-25602384)
chr2 (117-280)||(19660138-19660299)
chr2 (81-213)||(7321843-7321976)
chr2 (197-282)||(24087295-24087378)
chr2 (142-282)||(271426-271564)
chr2 (177-282)||(4448021-4448124)
chr2 (177-282)||(28974305-28974407)
chr2 (179-213)||(36890576-36890610)
chr2 (182-213)||(23836599-23836630)
chr2 (115-234)||(24884943-24885062)
chr2 (182-213)||(25875814-25875845)
[»] chr5 (29 HSPs)
chr5 (81-320)||(32965939-32966178)
chr5 (93-322)||(28902407-28902636)
chr5 (93-322)||(28938802-28939031)
chr5 (109-322)||(3674078-3674290)
chr5 (109-322)||(16595723-16595935)
chr5 (105-282)||(21296990-21297166)
chr5 (109-312)||(23494145-23494350)
chr5 (109-322)||(5450660-5450874)
chr5 (109-311)||(7728647-7728849)
chr5 (115-322)||(432679-432884)
chr5 (138-282)||(21310557-21310700)
chr5 (115-282)||(37983620-37983787)
chr5 (88-322)||(21222406-21222639)
chr5 (93-322)||(21617232-21617461)
chr5 (115-280)||(24225171-24225335)
chr5 (142-282)||(19405794-19405934)
chr5 (142-310)||(23466664-23466830)
chr5 (184-322)||(19862425-19862563)
chr5 (142-282)||(11337038-11337177)
chr5 (142-282)||(24182984-24183123)
chr5 (142-282)||(20712331-20712471)
chr5 (177-262)||(22662570-22662652)
chr5 (113-273)||(25005082-25005240)
chr5 (179-282)||(21397348-21397449)
chr5 (182-282)||(4865518-4865615)
chr5 (182-282)||(28261772-28261869)
chr5 (93-160)||(18530897-18530964)
chr5 (142-211)||(1168058-1168127)
chr5 (184-213)||(11584376-11584405)
[»] chr4 (31 HSPs)
chr4 (115-325)||(37956849-37957059)
chr4 (142-325)||(19821628-19821811)
chr4 (142-312)||(27961197-27961366)
chr4 (89-322)||(15045044-15045277)
chr4 (89-322)||(15109147-15109380)
chr4 (109-279)||(41165774-41165944)
chr4 (81-322)||(13809301-13809541)
chr4 (88-311)||(14901458-14901680)
chr4 (88-322)||(7964509-7964743)
chr4 (142-273)||(34177501-34177629)
chr4 (115-282)||(7185669-7185835)
chr4 (142-312)||(18494181-18494349)
chr4 (115-282)||(18276690-18276856)
chr4 (142-322)||(52265360-52265539)
chr4 (142-282)||(15013136-15013274)
chr4 (179-325)||(30232386-30232531)
chr4 (93-261)||(47534882-47535051)
chr4 (180-282)||(41256259-41256361)
chr4 (109-213)||(23269753-23269858)
chr4 (142-213)||(20813399-20813471)
chr4 (179-218)||(21959354-21959393)
chr4 (183-283)||(40885458-40885562)
chr4 (179-282)||(44056170-44056271)
chr4 (179-213)||(819821-819855)
chr4 (182-215)||(30458224-30458257)
chr4 (177-282)||(16732425-16732527)
chr4 (182-282)||(53704627-53704725)
chr4 (182-213)||(12837094-12837125)
chr4 (93-160)||(15674918-15674985)
chr4 (179-210)||(34395583-34395614)
chr4 (182-213)||(53907602-53907633)
[»] chr6 (26 HSPs)
chr6 (110-319)||(21410870-21411078)
chr6 (109-322)||(25367055-25367267)
chr6 (83-282)||(16887583-16887783)
chr6 (142-324)||(25919827-25920009)
chr6 (115-322)||(21623384-21623591)
chr6 (115-325)||(15740442-15740643)
chr6 (177-322)||(18399154-18399297)
chr6 (81-282)||(35135802-35136004)
chr6 (119-282)||(33538198-33538361)
chr6 (142-282)||(33324948-33325088)
chr6 (116-322)||(18629433-18629639)
chr6 (92-282)||(17083000-17083189)
chr6 (93-282)||(22361568-22361756)
chr6 (115-281)||(25654381-25654546)
chr6 (142-282)||(15079563-15079702)
chr6 (115-213)||(14152634-14152733)
chr6 (137-282)||(17556867-17557010)
chr6 (179-282)||(18432899-18432999)
chr6 (182-282)||(22441190-22441287)
chr6 (143-218)||(16086335-16086411)
chr6 (142-213)||(18777452-18777524)
chr6 (179-282)||(32899046-32899147)
chr6 (179-213)||(16106839-16106873)
chr6 (182-282)||(18570535-18570632)
chr6 (181-213)||(25640453-25640485)
chr6 (81-160)||(35009248-35009328)
[»] scaffold0022 (3 HSPs)
scaffold0022 (109-322)||(102743-102953)
scaffold0022 (115-271)||(109849-110005)
scaffold0022 (109-282)||(112366-112536)
[»] scaffold0150 (1 HSPs)
scaffold0150 (81-278)||(28796-28995)
[»] scaffold0095 (1 HSPs)
scaffold0095 (81-312)||(33518-33749)
[»] chr8 (35 HSPs)
chr8 (81-312)||(39446556-39446787)
chr8 (133-279)||(22735690-22735836)
chr8 (143-325)||(31194176-31194358)
chr8 (115-282)||(25296414-25296582)
chr8 (115-282)||(25758434-25758602)
chr8 (115-321)||(17285421-17285628)
chr8 (109-282)||(21197971-21198143)
chr8 (161-324)||(15970035-15970196)
chr8 (115-280)||(33528683-33528848)
chr8 (115-322)||(5854830-5855036)
chr8 (115-282)||(15933554-15933721)
chr8 (142-322)||(38533865-38534045)
chr8 (142-281)||(22981528-22981664)
chr8 (115-322)||(23149995-23150201)
chr8 (115-312)||(23151660-23151854)
chr8 (105-282)||(29306673-29306852)
chr8 (115-261)||(23225903-23226049)
chr8 (115-322)||(23158377-23158580)
chr8 (115-282)||(23837454-23837622)
chr8 (115-322)||(26011710-26011913)
chr8 (88-213)||(21259294-21259420)
chr8 (115-282)||(33610877-33611044)
chr8 (177-282)||(21681259-21681363)
chr8 (142-282)||(20561483-20561622)
chr8 (142-282)||(20573044-20573183)
chr8 (182-283)||(20481860-20481957)
chr8 (182-282)||(22234698-22234795)
chr8 (182-282)||(25122698-25122795)
chr8 (142-213)||(20529705-20529777)
chr8 (182-213)||(37611991-37612022)
chr8 (143-248)||(16404859-16404965)
chr8 (142-202)||(20653885-20653946)
chr8 (142-206)||(19331168-19331231)
chr8 (142-206)||(37652267-37652330)
chr8 (150-206)||(38635507-38635563)
[»] chr7 (32 HSPs)
chr7 (109-322)||(13377745-13377959)
chr7 (109-322)||(13274993-13275204)
chr7 (81-309)||(49047465-49047692)
chr7 (115-322)||(16914752-16914959)
chr7 (115-282)||(34241031-34241198)
chr7 (115-282)||(48356900-48357066)
chr7 (81-177)||(9080965-9081061)
chr7 (115-322)||(9611524-9611731)
chr7 (115-322)||(9839095-9839302)
chr7 (112-322)||(17223757-17223969)
chr7 (143-282)||(12247973-12248111)
chr7 (115-282)||(14271723-14271891)
chr7 (109-282)||(11287673-11287843)
chr7 (142-282)||(16569858-16569996)
chr7 (142-282)||(16595666-16595804)
chr7 (179-282)||(26070156-26070255)
chr7 (179-282)||(26093943-26094042)
chr7 (135-257)||(16919811-16919934)
chr7 (115-200)||(13389693-13389778)
chr7 (183-262)||(25124406-25124483)
chr7 (179-282)||(45452058-45452159)
chr7 (179-213)||(12759311-12759345)
chr7 (179-213)||(13862823-13862857)
chr7 (142-282)||(35095071-35095208)
chr7 (142-282)||(39046481-39046619)
chr7 (182-282)||(3895281-3895378)
chr7 (182-282)||(15822325-15822423)
chr7 (182-213)||(143962-143993)
chr7 (93-160)||(15709525-15709592)
chr7 (179-213)||(47290105-47290139)
chr7 (142-218)||(15359115-15359191)
chr7 (143-210)||(12369693-12369761)
[»] scaffold0016 (2 HSPs)
scaffold0016 (115-322)||(116382-116589)
scaffold0016 (182-213)||(164536-164567)
[»] scaffold0243 (1 HSPs)
scaffold0243 (109-322)||(2136-2347)
[»] scaffold0092 (1 HSPs)
scaffold0092 (81-322)||(3535-3776)
[»] scaffold0032 (1 HSPs)
scaffold0032 (115-282)||(104448-104614)
[»] scaffold0456 (2 HSPs)
scaffold0456 (142-282)||(1398-1537)
scaffold0456 (142-282)||(8543-8682)
[»] scaffold1272 (1 HSPs)
scaffold1272 (112-281)||(550-721)
[»] scaffold0080 (1 HSPs)
scaffold0080 (115-282)||(43622-43789)
[»] scaffold0589 (1 HSPs)
scaffold0589 (81-322)||(8021-8262)
[»] scaffold0409 (2 HSPs)
scaffold0409 (142-282)||(1200-1339)
scaffold0409 (142-282)||(9455-9594)
[»] scaffold0010 (1 HSPs)
scaffold0010 (142-312)||(31246-31415)
[»] scaffold0483 (1 HSPs)
scaffold0483 (110-281)||(6917-7090)
[»] scaffold0009 (1 HSPs)
scaffold0009 (115-321)||(69674-69880)
[»] scaffold0013 (1 HSPs)
scaffold0013 (115-281)||(35735-35902)
[»] scaffold0521 (1 HSPs)
scaffold0521 (142-282)||(11351-11488)
[»] scaffold0138 (1 HSPs)
scaffold0138 (142-282)||(22281-22420)
[»] scaffold0006 (1 HSPs)
scaffold0006 (115-280)||(197078-197242)
[»] scaffold0970 (1 HSPs)
scaffold0970 (199-325)||(2668-2795)
[»] scaffold0700 (1 HSPs)
scaffold0700 (115-322)||(2741-2948)
[»] scaffold0026 (1 HSPs)
scaffold0026 (142-282)||(89717-89856)
[»] scaffold0162 (1 HSPs)
scaffold0162 (93-322)||(6826-7056)
[»] scaffold0021 (5 HSPs)
scaffold0021 (88-282)||(11944-12139)
scaffold0021 (142-276)||(16162-16296)
scaffold0021 (142-276)||(25693-25827)
scaffold0021 (179-213)||(132139-132173)
scaffold0021 (185-213)||(88598-88626)
[»] scaffold0053 (1 HSPs)
scaffold0053 (141-282)||(76697-76838)
[»] scaffold0058 (1 HSPs)
scaffold0058 (142-282)||(70158-70297)
[»] scaffold0389 (1 HSPs)
scaffold0389 (142-282)||(10918-11056)
[»] scaffold0151 (1 HSPs)
scaffold0151 (115-325)||(22246-22456)
[»] scaffold0031 (2 HSPs)
scaffold0031 (115-282)||(97023-97189)
scaffold0031 (142-261)||(70891-71007)
[»] scaffold1295 (1 HSPs)
scaffold1295 (142-273)||(372-500)
[»] scaffold0507 (1 HSPs)
scaffold0507 (142-273)||(1362-1490)
[»] scaffold0480 (2 HSPs)
scaffold0480 (109-282)||(8701-8873)
scaffold0480 (142-213)||(5101-5172)
[»] scaffold0028 (1 HSPs)
scaffold0028 (81-282)||(79795-79995)
[»] scaffold0025 (1 HSPs)
scaffold0025 (184-282)||(53602-53699)
[»] scaffold0183 (1 HSPs)
scaffold0183 (179-282)||(5567-5669)
[»] scaffold0123 (2 HSPs)
scaffold0123 (183-282)||(8266-8364)
scaffold0123 (183-261)||(11153-11230)
[»] scaffold0554 (1 HSPs)
scaffold0554 (142-282)||(2172-2310)
[»] scaffold0610 (1 HSPs)
scaffold0610 (177-282)||(464-567)
[»] scaffold0103 (1 HSPs)
scaffold0103 (142-280)||(33920-34057)
[»] scaffold0014 (2 HSPs)
scaffold0014 (145-282)||(159556-159691)
scaffold0014 (112-279)||(85591-85755)
[»] scaffold0120 (3 HSPs)
scaffold0120 (142-282)||(31466-31604)
scaffold0120 (142-282)||(47402-47540)
scaffold0120 (179-282)||(21767-21867)
[»] scaffold0001 (1 HSPs)
scaffold0001 (143-282)||(61062-61201)
[»] scaffold0190 (1 HSPs)
scaffold0190 (168-282)||(10193-10305)
[»] scaffold0342 (1 HSPs)
scaffold0342 (111-213)||(12592-12695)
[»] scaffold0338 (1 HSPs)
scaffold0338 (109-282)||(9243-9415)
[»] scaffold0034 (1 HSPs)
scaffold0034 (179-282)||(40915-41015)
[»] scaffold0673 (1 HSPs)
scaffold0673 (182-282)||(715-813)
[»] scaffold0240 (1 HSPs)
scaffold0240 (182-282)||(7826-7924)
[»] scaffold0044 (1 HSPs)
scaffold0044 (142-213)||(38621-38693)
[»] scaffold0037 (1 HSPs)
scaffold0037 (142-213)||(24580-24652)
[»] scaffold0035 (2 HSPs)
scaffold0035 (177-213)||(109349-109385)
scaffold0035 (177-213)||(117850-117886)
[»] scaffold0008 (1 HSPs)
scaffold0008 (179-213)||(23014-23048)
[»] scaffold0396 (1 HSPs)
scaffold0396 (177-282)||(11596-11699)
[»] scaffold0816 (1 HSPs)
scaffold0816 (182-282)||(2959-3056)
[»] scaffold0740 (1 HSPs)
scaffold0740 (142-213)||(4606-4677)
[»] scaffold0598 (1 HSPs)
scaffold0598 (142-206)||(3584-3647)
[»] scaffold0359 (2 HSPs)
scaffold0359 (142-213)||(1638-1710)
scaffold0359 (182-282)||(11546-11644)
[»] scaffold0117 (1 HSPs)
scaffold0117 (142-213)||(11421-11493)
[»] scaffold0083 (1 HSPs)
scaffold0083 (182-282)||(15129-15226)
[»] scaffold0447 (2 HSPs)
scaffold0447 (182-213)||(4884-4915)
scaffold0447 (182-213)||(9498-9529)
[»] scaffold0383 (1 HSPs)
scaffold0383 (182-213)||(7493-7524)
[»] scaffold0260 (1 HSPs)
scaffold0260 (182-213)||(8670-8701)
[»] scaffold0808 (1 HSPs)
scaffold0808 (142-184)||(1974-2016)
[»] scaffold1932 (1 HSPs)
scaffold1932 (81-122)||(1188-1229)
[»] scaffold0327 (1 HSPs)
scaffold0327 (142-175)||(6030-6063)
[»] scaffold0193 (1 HSPs)
scaffold0193 (142-218)||(4923-4999)
[»] scaffold0387 (1 HSPs)
scaffold0387 (146-206)||(818-877)


Alignment Details
Target: chr3 (Bit Score: 198; Significance: 1e-108; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 88 - 325
Target Start/End: Original strand, 17960110 - 17960347
Alignment:
Q  88 agaggaaaagggttatcgaaggaggaacttgaagattcaagaagaggagagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaag 187  Q
    ||||||||| |||||  ||| |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  17960110 agaggaaaatggttagagaatgaggaacttgaagattgaagaagaggagagaacctaggagctaaagtgaaacttgagctagggaattgatctaactaag 17960209  T
Q  188 gtaagggggttagaattcatcataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcatgatgg 287  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  17960210 gtaagggggttagaattcatcataatcatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattaattaattgttcatgatgg 17960309  T
Q  288 ttagaatccgtgctcctattatgattttatgtttgtat 325  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  17960310 ttagaattcgtgctcctattatgattttatgtttgtat 17960347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 109 - 312
Target Start/End: Original strand, 11328784 - 11328987
Alignment:
Q  109 gaggaacttgaagattcaagaagaggagagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattcatc 208  Q
    ||||| |||||||||||||||   |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  11328784 gaggagcttgaagattcaagagttggagaggacctaggagctaaagtgaagcttgatctaggaaattgatctaactaaggtaagggggttagaattcatc 11328883  T
Q  209 ataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcatgatggttagaatccgtgctcctatta 308  Q
    ||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| || |||||||| |||||||| ||||    
T  11328884 ataatcatttttagtgtaaattttcaattattgtatgaataagtgcttaattgagtaattgattaattgttcataattgttagaattcgtgctccaatta 11328983  T
Q  309 tgat 312  Q
    ||||    
T  11328984 tgat 11328987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 81 - 322
Target Start/End: Complemental strand, 16880581 - 16880339
Alignment:
Q  81 ggagcagagaggaaaagggttatcga-aggaggaacttgaagattcaagaagaggagagaacctaggagctaaagtgaagcttgagctaggaaattgatc 179  Q
    |||||| |||||||||||||||  || | ||||| |||||||||||||||   |||||| |||||| |||||||||||||||||||||||| ||||||||    
T  16880581 ggagcaaagaggaaaagggttagagagaagaggagcttgaagattcaagagttggagaggacctagaagctaaagtgaagcttgagctagggaattgatc 16880482  T
Q  180 taactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgtt 279  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || || |||||||||||||||||||||||||    
T  16880481 taactaaggtaagggggttagaattcatcataatcatttttagtgtaaattttcaattgttgtatgaacaagtgtttaattgagtaattgattaattgtt 16880382  T
Q  280 catgatggttagaatccgtgctcctattatgattttatgtttg 322  Q
    ||| || ||| |||| |||||||| |||| |||  ||||||||    
T  16880381 cataattgtttgaattcgtgctccaattacgatgatatgtttg 16880339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 109 - 281
Target Start/End: Original strand, 47784580 - 47784752
Alignment:
Q  109 gaggaacttgaagattcaagaagaggagagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattcatc 208  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||||||| ||| |||||| |||||| ||||||||||||||||||||||||||||||    
T  47784580 gaggaacctgaatattcaagaagaggagagaacctaggagctaaagtgaagtttgggctagggaattgacctaactaaggtaagggggttagaattcatc 47784679  T
Q  209 ataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttca 281  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||    
T  47784680 ataatcatttttagtgtaaattttcaattgttgtatgaataagtgcttaattgagtaaatgatttattgttca 47784752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 109 - 322
Target Start/End: Complemental strand, 39656953 - 39656742
Alignment:
Q  109 gaggaacttgaagattcaagaagaggagagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattcatc 208  Q
    ||||| |||||||||||||||||| || |||||||||||| |||| |||||||||||||||| ||||||||||||||||||||||| ||||||||| |||    
T  39656953 gaggagcttgaagattcaagaagatgatagaacctaggagttaaaatgaagcttgagctagggaattgatctaactaaggtaagggagttagaattgatc 39656854  T
Q  209 ataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcatgatggttagaatccgtgctcctatta 308  Q
    ||||| |  ||||||| || |||||||||||||||||||||| ||||||||||||||| ||||||||||||||| || |||| |||||||||||| ||||    
T  39656853 ataatca--tttagtgcaatttttcaattgttgtatgaataagtgcttaattgagtaaatgattaattgttcataattgttaaaatccgtgctccaatta 39656756  T
Q  309 tgattttatgtttg 322  Q
    |||| |||||||||    
T  39656755 tgatgttatgtttg 39656742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 81 - 312
Target Start/End: Complemental strand, 17139965 - 17139734
Alignment:
Q  81 ggagcagagaggaaaagggttatcga-aggaggaacttgaagattcaagaagaggagaga-acctaggagctaaagtgaagcttgagctaggaaattgat 178  Q
    |||||| |||||||||||||||  || | |||||||||||||||||||| |  ||| ||| | ||||||| |||| ||||||||| |||||| |||| ||    
T  17139965 ggagcaaagaggaaaagggttagagagaagaggaacttgaagattcaaggattgga-agagagctaggaggtaaattgaagcttgggctagggaattaat 17139867  T
Q  179 ctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgt 278  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| |||    
T  17139866 ctaactaaggtaagggggttagaattcatcataatcattcttagtgtaaa-tttcaattgttgtatgaataagtgcttaattgagtaattgattaagtgt 17139768  T
Q  279 tcatgatggttagaatccgtgctcctattatgat 312  Q
    |||| || |||||||| |||||||| ||||||||    
T  17139767 tcataattgttagaattcgtgctccaattatgat 17139734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 142 - 322
Target Start/End: Complemental strand, 30207613 - 30207432
Alignment:
Q  142 ctaggagctaaagtgaagcttgagctaggaa-attgatctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgtt 240  Q
    |||||||| ||| |||||| | ||||||| | ||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  30207613 ctaggagcaaaattgaagcctaagctagggagattaatctaactaaggtaagggggttataattcatcataatcatttttagtgtaaattttcaattgtt 30207514  T
Q  241 gtatgaataattgcttaattgagtaattgattaattgttcatgatggttagaatccgtgctcctattatgattttatgtttg 322  Q
    |||||||||| ||||||||||||||||||||||||| |||||  |||||||||| |||||||| |||||||| |||||||||    
T  30207513 gtatgaataagtgcttaattgagtaattgattaattattcatactggttagaattcgtgctccaattatgatgttatgtttg 30207432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 109 - 325
Target Start/End: Original strand, 38810833 - 38811042
Alignment:
Q  109 gaggaacttgaagattcaagaagagga-gagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattcat 207  Q
    ||||| ||||||||||||||||  ||| |||| ||||||||||||||||||||||| |||||||| | |   ||||||||||||||||||||||||||||    
T  38810833 gaggagcttgaagattcaagaactggaagagatcctaggagctaaagtgaagcttgggctaggaattggtgataactaaggtaagggggttagaattcat 38810932  T
Q  208 cataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcatgatggttagaatccgtgctcctatt 307  Q
    |||||| ||||||||||||||||||||||||||| |||||||| ||||        |||||||||||||||||||||| |||||||| |||||||| |||    
T  38810933 cataatcatttttagtgtaaattttcaattgttgcatgaataagtgct--------taattgattaattgttcatgattgttagaattcgtgctccaatt 38811024  T
Q  308 atgattttatgtttgtat 325  Q
    ||||| || | |||||||    
T  38811025 atgatgttctttttgtat 38811042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 106 - 322
Target Start/End: Complemental strand, 12953397 - 12953180
Alignment:
Q  106 aaggaggaacttgaagattcaagaagaggagagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattc 205  Q
    |||||| | ||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||| |||||||||||||||||||||||| |||||||||    
T  12953397 aaggagaagcttgaagattcaagaagaggagagaacctaggagctaaattgaagtttgggctagggaattgatctaactaaggtaaggggattagaattc 12953298  T
Q  206 -atcataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcatga-tggttagaatccgtgctcc 303  Q
     |||||||| |  |||||||||| |||||||||  ||||||| ||| ||||||||||||||| ||||||||||||||| | | |||||||| |||| ||     
T  12953297 aatcataatca-atttagtgtaatttttcaattactgtatgattaagtgcttaattgagtaagtgattaattgttcattagttgttagaattcgtgttct 12953199  T
Q  304 tattatgattttatgtttg 322  Q
     ||||||||  ||||||||    
T  12953198 aattatgatgatatgtttg 12953180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 110 - 322
Target Start/End: Original strand, 14059035 - 14059244
Alignment:
Q  110 aggaacttgaagattcaagaagaggagagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattcatca 209  Q
    |||| ||||||||||||||  |||   |||||||||||||||||||||||  | ||||||| |||| ||||||||||| ||||||||||| |||||||||    
T  14059035 aggagcttgaagattcaagtggagagaagaacctaggagctaaagtgaagtctaagctagggaattaatctaactaag-taagggggttataattcatca 14059133  T
Q  210 taattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcatgatggttagaatccgtgctcctattat 309  Q
    |||| ||||| |||| || ||||||||| |||||||||||| ||||||||||| ||||||| |||||||||||||| |||||||| |||||||| |||||    
T  14059134 taatcatttt-agtgcaa-ttttcaattattgtatgaataagtgcttaattgactaattgactaattgttcatgattgttagaattcgtgctccaattat 14059231  T
Q  310 gattttatgtttg 322  Q
    ||| |||||||||    
T  14059232 gatgttatgtttg 14059244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 109 - 280
Target Start/End: Original strand, 11882038 - 11882207
Alignment:
Q  109 gaggaacttgaagattcaagaagaggagagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattcatc 208  Q
    ||||| |||||||||||||||   ||||||| |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  11882038 gaggagcttgaagattcaagagttggagagatcctaggagctaaagtgaagcttgacctagggaattgatctaactaaggtaagggggttagaattcatc 11882137  T
Q  209 ataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttc 280  Q
    ||||| |  |||||||||| |||| | ||||||||||| ||| ||||||||||| ||| |||||| ||||||    
T  11882138 ataatca--tttagtgtaacttttaatttgttgtatgattaagtgcttaattgaataagtgattatttgttc 11882207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 146 - 318
Target Start/End: Original strand, 12560092 - 12560263
Alignment:
Q  146 gagctaaagtgaagcttgagctaggaa-attgatctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgttgtat 244  Q
    |||||||| |||||||| || |||| | ||| ||||||||||||||||||||||| ||||||||||||| |||| |  || || ||||||||| ||||||    
T  12560092 gagctaaattgaagcttaagttagggagattaatctaactaaggtaagggggttaaaattcatcataatcatttat--tgcaatttttcaattattgtat 12560189  T
Q  245 gaataattgcttaattgagtaattgattaattgttcatgatggttagaatccgtgctcctattatgattttatg 318  Q
    |||||| ||||||||||||||||||||||||||||||| || |||||||| |||||||| |||||||| |||||    
T  12560190 gaataagtgcttaattgagtaattgattaattgttcataattgttagaattcgtgctccaattatgatgttatg 12560263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 115 - 282
Target Start/End: Complemental strand, 17191965 - 17191797
Alignment:
Q  115 cttgaagattcaagaagagg-agagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattca-tcataa 212  Q
    ||||||||||||||||  || ||||| ||||||||||||||||||| ||| |||||||| | |   ||| ||||||||||||||||||||||| ||| ||    
T  17191965 cttgaagattcaagaattggtagagatcctaggagctaaagtgaagtttgggctaggaattggtgataattaaggtaagggggttagaattcaatcacaa 17191866  T
Q  213 ttatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcat 282  Q
    | ||||| ||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  17191865 tcatttt-agtgtaatttttcaattgttgtatgaacaattgcttaattgagtaaatgattaattgttcat 17191797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 115 - 281
Target Start/End: Original strand, 3576261 - 3576428
Alignment:
Q  115 cttgaagattcaagaagagga-gagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattca-tcataa 212  Q
    |||||| |||||||||  ||| |||| |||||||| |||||||||||||| |||||||| |||   ||| ||||||||||||||||||||||| ||||||    
T  3576261 cttgaatattcaagaattggaagagatcctaggaggtaaagtgaagcttgggctaggaatttgtgataattaaggtaagggggttagaattcaatcataa 3576360  T
Q  213 ttatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttca 281  Q
    | ||||| ||||||| ||||||||||||||| |||||| ||||||||||||||| ||||||||||||||    
T  3576361 tcatttt-agtgtaatttttcaattgttgtacgaataagtgcttaattgagtaaatgattaattgttca 3576428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 109 - 269
Target Start/End: Complemental strand, 15876490 - 15876329
Alignment:
Q  109 gaggaacttgaagattcaagaagaggagagaacctaggagctaaagtgaagcttgagctaggaaattgatc-taactaaggtaaggggg-ttagaattca 206  Q
    ||||| |||||||||||||||   ||||||| | |||||| |||||||||||||| |||||||| ||||   ||| ||||||||||||| ||||||||||    
T  15876490 gaggagcttgaagattcaagagttggagagatcttaggagttaaagtgaagcttgggctaggaa-ttgacgataattaaggtaaggggggttagaattca 15876392  T
Q  207 tcataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattg 269  Q
    ||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||| ||||||    
T  15876391 tcataatcatttttagtgtaaattttcaattattgtatgaataagtgcttaattgattaattg 15876329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 115 - 273
Target Start/End: Original strand, 13301294 - 13301451
Alignment:
Q  115 cttgaagattcaagaagaggagagaa-cctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattcatcataat 213  Q
    |||||||||||||||||| | ||| | ||||||||||||||||||||||| |||||||| |||  |||| ||||||||||||||||||||||||||||||    
T  13301294 cttgaagattcaagaagatgtgaggatcctaggagctaaagtgaagcttgggctaggaatttgtgctaattaaggtaagggggttagaattcatcataat 13301393  T
Q  214 tatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgatta 273  Q
     |  |||||||| | |||||| ||||||||||| ||| ||||||||||| ||| ||||||    
T  13301394 ca--tttagtgtgatttttcatttgttgtatgattaagtgcttaattgaataagtgatta 13301451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 115 - 273
Target Start/End: Original strand, 13311950 - 13312107
Alignment:
Q  115 cttgaagattcaagaagaggagagaa-cctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattcatcataat 213  Q
    |||||||||||||||||| | ||| | ||||||||||||||||||||||| |||||||| |||  |||| ||||||||||||||||||||||||||||||    
T  13311950 cttgaagattcaagaagatgtgaggatcctaggagctaaagtgaagcttgggctaggaatttgtgctaattaaggtaagggggttagaattcatcataat 13312049  T
Q  214 tatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgatta 273  Q
     |  |||||||| | |||||| ||||||||||| ||| ||||||||||| ||| ||||||    
T  13312050 ca--tttagtgtgatttttcatttgttgtatgattaagtgcttaattgaataagtgatta 13312107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 142 - 273
Target Start/End: Complemental strand, 48421972 - 48421843
Alignment:
Q  142 ctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgttg 241  Q
    ||||||| |||||||||||| |||||||| ||||||||||||||||||||| | |||||||||||||||||| |  |||||||||| |||||| ||||||    
T  48421972 ctaggagttaaagtgaagctagagctagggaattgatctaactaaggtaagagagttagaattcatcataatca--tttagtgtaatttttcatttgttg 48421875  T
Q  242 tatgaataattgcttaattgagtaattgatta 273  Q
    ||||||||| ||||||||||| ||| ||||||    
T  48421874 tatgaataagtgcttaattgaataagtgatta 48421843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 115 - 282
Target Start/End: Complemental strand, 17205105 - 17204937
Alignment:
Q  115 cttgaagattcaagaagagg-agagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattc-atcataa 212  Q
    ||||||||||||||||  || ||| | ||||||||||||||||||||||| |||||||| | |   ||| |||||||||||||||||||||| |||||||    
T  17205105 cttgaagattcaagaattggtagaaatcctaggagctaaagtgaagcttgggctaggaattggtgataattaaggtaagggggttagaattccatcataa 17205006  T
Q  213 ttatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcat 282  Q
    | ||||| ||||||| ||||||||||| ||| ||| || ||||||||||||||| |||||||||||||||    
T  17205005 tcatttt-agtgtaatttttcaattgtggtacgaacaagtgcttaattgagtaaatgattaattgttcat 17204937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 163 - 325
Target Start/End: Complemental strand, 14080884 - 14080722
Alignment:
Q  163 gagctaggaaattgatctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattga 262  Q
    |||||||| |||| || |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | | |||||||||| || |||||||     
T  14080884 gagctagggaattaatgtaactaaggtaagggggttagaattcatcataatcatttttagtgtaaattttcaactatggtatgaataagtgtttaattgg 14080785  T
Q  263 gtaattgattaattgttcat-gatggttagaatccgtgctcctattatgattttatgtttgtat 325  Q
     ||| ||||||||||| ||| ||| |||| ||| |||||||| | ||||||  |||||||||||    
T  14080784 ataaatgattaattgtgcatagat-gttaaaattcgtgctccaactatgatgatatgtttgtat 14080722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 88 - 246
Target Start/End: Complemental strand, 15520497 - 15520341
Alignment:
Q  88 agaggaaaagggttatcga-aggaggaacttgaagattcaagaagaggagagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaa 186  Q
    |||||||||||||||  || | ||||| |||||||||| ||||||||||||||||||||||||| || ||||||||| |||||| |||||| ||||||||    
T  15520497 agaggaaaagggttagagagaagaggagcttgaagatttaagaagaggagagaacctaggagcttaattgaagcttgggctagggaattgacctaactaa 15520398  T
Q  187 ggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgttgtatga 246  Q
    | ||| ||||||| ||||||||||||| | ||||||||||| ||||| ||||||||||||    
T  15520397 gataa-ggggttataattcatcataatca-ttttagtgtaatttttc-attgttgtatga 15520341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 153 - 302
Target Start/End: Original strand, 9590617 - 9590765
Alignment:
Q  153 agtgaagcttgagctagga--aattgatctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaa-ttgttgtatgaata 249  Q
    |||||||||||||||||||  |||||  ||||||||||||||||| ||||||||||||||||| ||||  ||||||| ||||||| ||||||||||| ||    
T  9590617 agtgaagcttgagctaggattaattg--ctaactaaggtaaggggattagaattcatcataatcattt--agtgtaatttttcaaattgttgtatgatta 9590712  T
Q  250 attgcttaattgagtaattgattaattgttcatgatggttagaatccgtgctc 302  Q
    | ||||||||||| ||| || ||||||||||||  | |||| |||||||||||    
T  9590713 agtgcttaattgaataagtggttaattgttcatagttgttaaaatccgtgctc 9590765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 109 - 222
Target Start/End: Original strand, 12487596 - 12487709
Alignment:
Q  109 gaggaacttgaagattcaagaagaggagaga-acctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattcat 207  Q
    |||||||||||||||||||| |  ||| ||| | ||| |||||||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  12487596 gaggaacttgaagattcaaggattgga-agagagctaagagctaaaatgaagcttgagctagggaattaatctaactaaggtaagggggttagaattcat 12487694  T
Q  208 cataattatttttag 222  Q
    ||||||  |||||||    
T  12487695 cataatcgtttttag 12487709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 224 - 322
Target Start/End: Original strand, 12488659 - 12488757
Alignment:
Q  224 gtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcatgatggttagaatccgtgctcctattatgattttatgtttg 322  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||| || |||||||| | |||||  |||||||| || ||||||    
T  12488659 gtaaattttcaattgttgtatgaataagtgcttaattgagtcattaattaattgttcataattgttagaattcatgctctaattatgatattgtgtttg 12488757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 142 - 282
Target Start/End: Original strand, 14527932 - 14528071
Alignment:
Q  142 ctaggagctaaagtgaagcttgagctaggaa-attgatctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgtt 240  Q
    |||||||| ||| |||||| | ||||||| | ||| ||||||||||||||||||||||||||||||||||||| |  |||| || || ||||||||| ||    
T  14527932 ctaggagcaaaattgaagcctaagctagggagattaatctaactaaggtaagggggttagaattcatcataatca--tttattgcaatttttcaattatt 14528029  T
Q  241 gtatgaataattgcttaattgagt-aattgattaattgttcat 282  Q
    ||||||| || |||||||||  || ||||||||||||||||||    
T  14528030 gtatgaa-aagtgcttaattaggtgaattgattaattgttcat 14528071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 177 - 282
Target Start/End: Complemental strand, 3578447 - 3578344
Alignment:
Q  177 atctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagt-aattgattaat 275  Q
    |||||||||||||||| |||||||||||||||||||| |||| | |    ||||||||||| ||||| |||||| |||||||||| || |||||||||||    
T  3578447 atctaactaaggtaagcgggttagaattcatcataatcatttattg---caattttcaattattgtaggaataagtgcttaattgggtaaattgattaat 3578351  T
Q  276 tgttcat 282  Q
    |||||||    
T  3578350 tgttcat 3578344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 11060859 - 11060994
Alignment:
Q  142 ctaggagctaaagtgaagcttgagctaggaa-attgatctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgtt 240  Q
    |||||||| ||| |||||||| ||||||| | ||| |||||||||||||||||||||| |||||||||||||| |   | | || || ||||||||| ||    
T  11060859 ctaggagcaaaactgaagcttaagctagggagattaatctaactaaggtaagggggttggaattcatcataatca---taattgcaatttttcaattatt 11060955  T
Q  241 gtatgaataattgcttaattgagtaattgattaattgtt 279  Q
    |||||||||| ||||||||||  ||||| |||| |||||    
T  11060956 gtatgaataagtgcttaattggataattaattatttgtt 11060994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 174 - 276
Target Start/End: Complemental strand, 34560231 - 34560130
Alignment:
Q  174 ttgatctaactaaggtaagggggttagaattca-tcataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgatt 272  Q
    |||| |||| ||||||||||||||||||||||| |||| || ||||  ||||||| ||||||||| |||||||| ||| ||||||||||||||| |||||    
T  34560231 ttgagctaattaaggtaagggggttagaattcaatcatgatcattt--agtgtaatttttcaattattgtatgattaagtgcttaattgagtaagtgatt 34560134  T
Q  273 aatt 276  Q
    ||||    
T  34560133 aatt 34560130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 109 - 213
Target Start/End: Complemental strand, 15551028 - 15550924
Alignment:
Q  109 gaggaacttgaagattcaagaagaggagagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattcatc 208  Q
    ||||| |||||||||||||||   ||||||| |||| ||| |||||||||||||| |||||||| | |   ||| |||| ||||||||||||||||||||    
T  15551028 gaggagcttgaagattcaagagttggagagatcctacgagttaaagtgaagcttgggctaggaattggtgataattaagataagggggttagaattcatc 15550929  T
Q  209 ataat 213  Q
    |||||    
T  15550928 ataat 15550924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 142 - 282
Target Start/End: Complemental strand, 35124090 - 35123951
Alignment:
Q  142 ctaggagctaaagtgaagcttgagctaggaa-attgatctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaatt-gt 239  Q
    |||||||| ||| |||||| | ||||||| | ||| ||||||||||||||| ||||||||||||||||||||| |   ||| || || |||||||||  |    
T  35124090 ctaggagcaaaattgaagcctaagctagggagattaatctaactaaggtaaaggggttagaattcatcataatca---ttattgcaatttttcaattatt 35123994  T
Q  240 tgtatgaataattgcttaattgagt-aattgattaattgttcat 282  Q
    |||||||| || |||||||||| || ||||||||||||||||||    
T  35123993 tgtatgaa-aagtgcttaattgggtgaattgattaattgttcat 35123951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 177 - 282
Target Start/End: Complemental strand, 14295797 - 14295695
Alignment:
Q  177 atctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagt-aattgattaat 275  Q
    ||||||||||||||||||||||||||||||||||||| |   ||| || || ||||||||| ||||||||| || |||| || || || |||||||||||    
T  14295797 atctaactaaggtaagggggttagaattcatcataatca---ttattgcaatttttcaattattgtatgaa-aagtgctaaaatgggtgaattgattaat 14295702  T
Q  276 tgttcat 282  Q
    |||||||    
T  14295701 tgttcat 14295695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 177 - 282
Target Start/End: Complemental strand, 14301424 - 14301322
Alignment:
Q  177 atctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagt-aattgattaat 275  Q
    ||||||||||||||||||||||||||||||||||||| |   ||| || || ||||||||| ||||||||| || |||| || || || |||||||||||    
T  14301424 atctaactaaggtaagggggttagaattcatcataatca---ttattgcaatttttcaattattgtatgaa-aagtgctaaaatgggtgaattgattaat 14301329  T
Q  276 tgttcat 282  Q
    |||||||    
T  14301328 tgttcat 14301322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 183 - 262
Target Start/End: Original strand, 51961030 - 51961107
Alignment:
Q  183 ctaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattga 262  Q
    ||||||||||||||||||  ||||||||||| ||||  ||||||| |||||| ||||||||||| ||| |||||||||||    
T  51961030 ctaaggtaagggggttagtcttcatcataatcattt--agtgtaatttttcatttgttgtatgattaagtgcttaattga 51961107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 179 - 282
Target Start/End: Complemental strand, 14298778 - 14298677
Alignment:
Q  179 ctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaatt-gttgtatgaataattgcttaattgagt-aattgattaatt 276  Q
    ||||||||||||||||||||||||||||||||||| |   ||| || || |||||||||  ||||||||| || |||||||||| || ||||||||||||    
T  14298778 ctaactaaggtaagggggttagaattcatcataatca---ttattgcaatttttcaattatttgtatgaa-aagtgcttaattgggtgaattgattaatt 14298683  T
Q  277 gttcat 282  Q
    ||||||    
T  14298682 gttcat 14298677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 179 - 282
Target Start/End: Complemental strand, 14304405 - 14304304
Alignment:
Q  179 ctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaatt-gttgtatgaataattgcttaattgagt-aattgattaatt 276  Q
    ||||||||||||||||||||||||||||||||||| |   ||| || || |||||||||  ||||||||| || |||||||||| || ||||||||||||    
T  14304405 ctaactaaggtaagggggttagaattcatcataatca---ttattgcaatttttcaattatttgtatgaa-aagtgcttaattgggtgaattgattaatt 14304310  T
Q  277 gttcat 282  Q
    ||||||    
T  14304309 gttcat 14304304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 116 - 219
Target Start/End: Complemental strand, 12031932 - 12031826
Alignment:
Q  116 ttgaagattcaagaagagg-agagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaaggggg-ttagaattc-atcataa 212  Q
    |||||||||||||||  || ||||| ||||||||||||||||||||||| |||||||| | |   ||| ||||||||||||| ||||||||| |||||||    
T  12031932 ttgaagattcaagaattggtagagatcctaggagctaaagtgaagcttgggctaggaattggtgataattaaggtaagggggtttagaattcaatcataa 12031833  T
Q  213 ttatttt 219  Q
    | |||||    
T  12031832 tcatttt 12031826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 109 - 282
Target Start/End: Original strand, 50111871 - 50112042
Alignment:
Q  109 gaggaacttgaagattcaagaagaggagagaacctaggagctaaagtgaagcttgagctag-gaaattgatctaactaaggtaagggggttagaattcat 207  Q
    |||||||||||||| |||||  | | ||||| | ||||||| ||| |||||| | |||||| || ||| | |||||||||||||||||||||||||||||    
T  50111871 gaggaacttgaagaatcaaggtgtgaagagagc-taggagcaaaattgaagcctaagctagagagattaacctaactaaggtaagggggttagaattcat 50111969  T
Q  208 cataattatttttagtgtaaattttcaatt-gttgtatgaataattgcttaatt-gagtaattgattaattgttcat 282  Q
    |||||| | || | ||   |||||||||||  ||||||||| || ||||||||| ||  ||||||||||||||||||    
T  50111970 cataatcacttattgt---aattttcaattatttgtatgaa-aagtgcttaattggatgaattgattaattgttcat 50112042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 142 - 282
Target Start/End: Original strand, 6146621 - 6146760
Alignment:
Q  142 ctaggagctaaagtgaagcttgagctag-gaaattgatctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaatt-gt 239  Q
    |||||||| ||| |||||| | |||||| || ||| | ||||||||||||||||||||||||||||||||||| | || | ||   |||||||||||  |    
T  6146621 ctaggagcaaaattgaagcctaagctagagagattaacctaactaaggtaagggggttagaattcatcataatcacttattgt---aattttcaattatt 6146717  T
Q  240 tgtatgaataattgcttaatt-gagtaattgattaattgttcat 282  Q
    |||||||| || ||||||||| ||  ||||||||||||||||||    
T  6146718 tgtatgaa-aagtgcttaattggatgaattgattaattgttcat 6146760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 218
Target Start/End: Original strand, 55440746 - 55440787
Alignment:
Q  177 atctaactaaggtaagggggttagaattcatcataattattt 218  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  55440746 atctaactaaggtaagggggttagaattcatcataatcattt 55440787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 142 - 213
Target Start/End: Original strand, 6154183 - 6154255
Alignment:
Q  142 ctaggagctaaagtgaagcttgagctag-gaaattgatctaactaaggtaagggggttagaattcatcataat 213  Q
    |||||||| ||| |||||| | |||||| || ||| | |||||||||||||||||||||||||||||||||||    
T  6154183 ctaggagcaaaattgaagcctaagctagagatattaacctaactaaggtaagggggttagaattcatcataat 6154255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 142 - 213
Target Start/End: Original strand, 12349391 - 12349463
Alignment:
Q  142 ctaggagctaaagtgaagcttgagctag-gaaattgatctaactaaggtaagggggttagaattcatcataat 213  Q
    |||||||| | | |||||||| |||||| || ||| | |||||||||||||||||||||||||||||||||||    
T  12349391 ctaggagcaatattgaagcttaagctagagagattaacctaactaaggtaagggggttagaattcatcataat 12349463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 142 - 213
Target Start/End: Complemental strand, 17101047 - 17100975
Alignment:
Q  142 ctaggagctaaagtgaagcttgagctag-gaaattgatctaactaaggtaagggggttagaattcatcataat 213  Q
    |||||||| ||| |||||  | |||||| |||||| | |||||||||||||||||||||||||||||||||||    
T  17101047 ctaggagcaaaattgaagtctaagctagagaaattaacctaactaaggtaagggggttagaattcatcataat 17100975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 142 - 213
Target Start/End: Complemental strand, 17101732 - 17101660
Alignment:
Q  142 ctaggagctaaagtgaagcttgagctag-gaaattgatctaactaaggtaagggggttagaattcatcataat 213  Q
    |||||||| ||| |||||  | |||||| |||||| | |||||||||||||||||||||||||||||||||||    
T  17101732 ctaggagcaaaattgaagtctaagctagagaaattaacctaactaaggtaagggggttagaattcatcataat 17101660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 142 - 213
Target Start/End: Original strand, 17522742 - 17522814
Alignment:
Q  142 ctaggagctaaagtgaagcttgagctaggaa-attgatctaactaaggtaagggggttagaattcatcataat 213  Q
    |||||||| ||| |||||| | ||||||| | ||| || ||||||||||||||||||||||||||||||||||    
T  17522742 ctaggagcaaaattgaagcctaagctagggagattaatataactaaggtaagggggttagaattcatcataat 17522814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 182 - 282
Target Start/End: Original strand, 22144165 - 22144263
Alignment:
Q  182 actaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaatt-gttgtatgaataattgcttaattgagt-aattgattaattgtt 279  Q
    |||||||||||||||||||||||||||||||| | |||| ||   |||||||||||  ||||||||| || |||||||||| || |||||||||| ||||    
T  22144165 actaaggtaagggggttagaattcatcataatcactttttgt---aattttcaattatttgtatgaa-aagtgcttaattgggtgaattgattaactgtt 22144260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 142 - 213
Target Start/End: Complemental strand, 40939521 - 40939449
Alignment:
Q  142 ctaggagctaaagtgaagcttgagctaggaa-attgatctaactaaggtaagggggttagaattcatcataat 213  Q
    |||||||| ||| |||||| | ||||||| | ||| || ||||||||||||||||||||||||||||||||||    
T  40939521 ctaggagcaaaattgaagcctaagctagggagattaatataactaaggtaagggggttagaattcatcataat 40939449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 282
Target Start/End: Complemental strand, 54424369 - 54424268
Alignment:
Q  179 ctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaatt-gttgtatgaataattgcttaattgagt-aattgattaatt 276  Q
    ||||||||||||||||||||||||||||||||||| | ||    | | |||||||||||  ||||||||| || |||||||||| || ||||||||||||    
T  54424369 ctaactaaggtaagggggttagaattcatcataatcactt---atttcaattttcaattatttgtatgaa-aagtgcttaattgggtgaattgattaatt 54424274  T
Q  277 gttcat 282  Q
    ||||||    
T  54424273 gttcat 54424268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 142 - 282
Target Start/End: Original strand, 16181800 - 16181937
Alignment:
Q  142 ctaggagctaaagtgaagcttgagctaggaa-attgatctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaatt-gt 239  Q
    |||||||| ||| |||||| | ||||||| | ||| ||||| ||||||||||||||||||||||||||||||| | |||| ||   |||||||||||  |    
T  16181800 ctaggagcaaaattgaagcctaagctagggagattaatcta-ctaaggtaagggggttagaattcatcataatcactttt-gt---aattttcaattatt 16181894  T
Q  240 tgtatgaataattgcttaatt-gagtaattgattaattgttcat 282  Q
    |||||| |||| ||||||||| ||  ||||||||||||||||||    
T  16181895 tgtatg-ataagtgcttaattggatgaattgattaattgttcat 16181937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 282
Target Start/End: Original strand, 317403 - 317500
Alignment:
Q  182 actaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaatt-gttgtatgaataattgcttaatt-gagtaattgattaattgtt 279  Q
    |||||||||||||||||||||||||||||||| | |||| ||   |||||||||||  ||||||| |||| ||||||||| ||  |||||||||||||||    
T  317403 actaaggtaagggggttagaattcatcataatcactttt-gt---aattttcaattatttgtatg-ataagtgcttaattggatgaattgattaattgtt 317497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 213
Target Start/End: Complemental strand, 38528121 - 38528050
Alignment:
Q  142 ctaggagctaaagtgaagcttgagctaggaa-attgatctaactaaggtaagggggttagaattcatcataat 213  Q
    |||||||| ||| |||||||| ||||||| | ||| | ||| |||||||||||||||||||||||||||||||    
T  38528121 ctaggagcaaaattgaagcttaagctagggagattaaccta-ctaaggtaagggggttagaattcatcataat 38528050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 213
Target Start/End: Complemental strand, 13817864 - 13817833
Alignment:
Q  182 actaaggtaagggggttagaattcatcataat 213  Q
    ||||||||||||||||||||||||||||||||    
T  13817864 actaaggtaagggggttagaattcatcataat 13817833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 213
Target Start/End: Original strand, 16995954 - 16995985
Alignment:
Q  182 actaaggtaagggggttagaattcatcataat 213  Q
    ||||||||||||||||||||||||||||||||    
T  16995954 actaaggtaagggggttagaattcatcataat 16995985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 322
Target Start/End: Complemental strand, 15517917 - 15517847
Alignment:
Q  252 tgcttaattgagtaattgattaattgttcatgatggttagaatccgtgctcctattatgattttatgtttg 322  Q
    ||||||||||||||| ||||||||||||||| |  |||| ||| |||||||  ||||||||  ||||||||    
T  15517917 tgcttaattgagtaagtgattaattgttcataaatgttaaaattcgtgctctaattatgatgatatgtttg 15517847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 282
Target Start/End: Original strand, 55440795 - 55440839
Alignment:
Q  239 ttgtatgaataattgcttaattgagt-aattgattaattgttcat 282  Q
    |||||||||||| |||||||||| || ||||||||||||||||||    
T  55440795 ttgtatgaataagtgcttaattgggtgaattgattaattgttcat 55440839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 189; Significance: 1e-102; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 109 - 325
Target Start/End: Original strand, 36356111 - 36356327
Alignment:
Q  109 gaggaacttgaagattcaagaagaggagagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattcatc 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  36356111 gaggaacttgaagattcaagaagaggagagaacctaggagctaaagtgaagcttgagctagggaattgatctaactaaagtaagggggttagaattcatc 36356210  T
Q  209 ataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcatgatggttagaatccgtgctcctatta 308  Q
    ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  36356211 ataatcatttttagtgtaaattttcaattgttgtatgaataagtgcttaattgagtaattgattaattgttcatgattgttagaattcgtgctcctatta 36356310  T
Q  309 tgattttatgtttgtat 325  Q
    |||| ||||||||||||    
T  36356311 tgatgttatgtttgtat 36356327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 81 - 322
Target Start/End: Complemental strand, 16646369 - 16646128
Alignment:
Q  81 ggagcagagaggaaaagggttatcgaaggaggaacttgaagattcaagaagaggagagaacctaggagctaaagtgaagcttgagctaggaaattgatct 180  Q
    |||||| ||||||||||||||   |||||||||||||||||||||||||  | |||||||||||||| |||||||||||||||||||||| |||||||||    
T  16646369 ggagcaaagaggaaaagggttggagaaggaggaacttgaagattcaagagaatgagagaacctaggaactaaagtgaagcttgagctagggaattgatct 16646270  T
Q  181 aactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttc 280  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  16646269 aactaaggtaagggggttagaattcatcataatcatttttagtgtaaattttcaattgttgtatgaataagtgcttaattgagtaattgattaattgttc 16646170  T
Q  281 atgatggttagaatccgtgctcctattatgattttatgtttg 322  Q
    || || |||||||| |||||||| |||||||| |||||||||    
T  16646169 ataattgttagaattcgtgctccaattatgatgttatgtttg 16646128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 93 - 322
Target Start/End: Complemental strand, 16657083 - 16656854
Alignment:
Q  93 aaaagggttatcgaaggaggaacttgaagattcaagaagaggagagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaag 192  Q
    ||||||||||  ||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  16657083 aaaagggttagagaaagagaagcttgaagattcaagaagaggagagaacctaggagctaaagtgaagcttgggctagggaattgatctaactaaggtaag 16656984  T
Q  193 ggggttagaattcatcataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcatgatggttaga 292  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||    
T  16656983 ggggttagaattcatcataatcatttttagtgttaattttcaattgttgtatgaataagtgcttaattgagtaattgattaattgttcataattgttaga 16656884  T
Q  293 atccgtgctcctattatgattttatgtttg 322  Q
    || |||||||| |||||||| |||||||||    
T  16656883 attcgtgctccaattatgatgttatgtttg 16656854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 109 - 325
Target Start/End: Original strand, 38033491 - 38033708
Alignment:
Q  109 gaggaacttgaagattcaagaagaggagagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaa-gggggttagaattcat 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||| |||||||||||| ||||||||||||||||    
T  38033491 gaggaacttgaagattcaagaagaggagagaacctaggagctaaagtgaagctcgaactagggaattgatataactaaggtaaagggggttagaattcat 38033590  T
Q  208 cataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcatgatggttagaatccgtgctcctatt 307  Q
    |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||  ||||||| ||||||||||||    
T  38033591 cataatcatttttagtgtaaattttcaattgttgtatgaataagtgcttaattgagtaattgattaattgttaatgattattagaattcgtgctcctatt 38033690  T
Q  308 atgattttatgtttgtat 325  Q
    ||||| ||||||||||||    
T  38033691 atgatgttatgtttgtat 38033708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 93 - 322
Target Start/End: Original strand, 20955243 - 20955470
Alignment:
Q  93 aaaagggttatcgaaggaggaacttgaagattcaagaagaggagagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaag 192  Q
    ||||||||||  ||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  20955243 aaaagggttagagaaggagaagcttgaagattcaagaaaaggagagaacctaggagctaaagtgaagcttgagctagggaattgatctaactaaggtaag 20955342  T
Q  193 ggggttagaattcatcataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcatgatggttaga 292  Q
    ||||||| ||||||||||||| |  ||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| || ||||||    
T  20955343 ggggttataattcatcataatca--tttagtgcaaattttcaattgttgtatgaataagtgcttaattgagtaaatgattaattgttcataattgttaga 20955440  T
Q  293 atccgtgctcctattatgattttatgtttg 322  Q
    ||  ||||||| |||||||| |||||||||    
T  20955441 atttgtgctccaattatgatgttatgtttg 20955470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 109 - 322
Target Start/End: Original strand, 22829245 - 22829456
Alignment:
Q  109 gaggaacttgaagattcaagaagaggagagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattcatc 208  Q
    ||||| |||||||||||||||||||||  || ||||||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||    
T  22829245 gaggagcttgaagattcaagaagaggaaggatcctaggagctaaagtgaagcttgggctagggaattgatctaactaaagtaagggggttagaattcatc 22829344  T
Q  209 ataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcatgatggttagaatccgtgctcctatta 308  Q
    ||||| |  ||||||| || |||||||||||||||||||||| ||||||||||||||||||||||||| ||||| || |||||||| |||||||| ||||    
T  22829345 ataatca--tttagtgcaatttttcaattgttgtatgaataagtgcttaattgagtaattgattaattattcataattgttagaattcgtgctccaatta 22829442  T
Q  309 tgattttatgtttg 322  Q
    |||| |||||||||    
T  22829443 tgatgttatgtttg 22829456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 109 - 322
Target Start/End: Complemental strand, 19603521 - 19603313
Alignment:
Q  109 gaggaacttgaagattcaagaagaggagagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattcatc 208  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| |||    ||||||||||||||||||||||||| |||||||||||    
T  19603521 gaggagcttgaagattcaagaagaggagaaaacctaggagctaaagtgaagcttgggctg---aattgatctaactaaggtaagggggctagaattcatc 19603425  T
Q  209 ataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcatgatggttagaatccgtgctcctatta 308  Q
    ||||| ||||  |||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| || |||| ||| |||||||| ||||    
T  19603424 ataatcattt--agtgcaaattttcaattattgtatgaataagtgcttaattgagtaattgattaattgttcataattgttaaaattcgtgctccaatta 19603327  T
Q  309 tgattttatgtttg 322  Q
    |||| |||||||||    
T  19603326 tgatgttatgtttg 19603313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 115 - 322
Target Start/End: Complemental strand, 27675219 - 27675012
Alignment:
Q  115 cttgaagattcaagaagaggagagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattcatcataatt 214  Q
    |||||||||||||||   | ||||| ||||||||||||||||||||||| |||||||| | ||  ||| ||||||||||||||||||||| ||||||||     
T  27675219 cttgaagattcaagattggaagagatcctaggagctaaagtgaagcttgggctaggaattggagataattaaggtaagggggttagaatttatcataatc 27675120  T
Q  215 atttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcatgatggttagaatccgtgctcctattatgattt 314  Q
     ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||  |||||||| |||||||| |||||||| |    
T  27675119 gtttttagtgtaaattttcaattgttgtatgaataagtgcttaattgagtaattgattatttgttcatgactgttagaattcgtgctccaattatgatgt 27675020  T
Q  315 tatgtttg 322  Q
    ||||||||    
T  27675019 tatgtttg 27675012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 111 - 312
Target Start/End: Original strand, 51627486 - 51627685
Alignment:
Q  111 ggaacttgaagattcaagaagaggagagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattcatcat 210  Q
    |||||||||||||||||| |  |||| || | ||||||||||| |||||||| ||||||| | || ||||||||||||||||||||||||||||||||||    
T  51627486 ggaacttgaagattcaaggattggagggagc-taggagctaaattgaagcttaagctagggagttaatctaactaaggtaagggggttagaattcatcat 51627584  T
Q  211 aattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcatgatggttagaatccgtgctcctattatg 310  Q
    ||| |||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||| |||||||| || ||||||||  ||||||| ||||||    
T  51627585 aatcatttttagtgtaaa-tttcaattgttgcatgaataagtgcttaattgagtaattgattatttgttcataatcgttagaatttgtgctccaattatg 51627683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 115 - 321
Target Start/End: Complemental strand, 20177599 - 20177392
Alignment:
Q  115 cttgaagattcaagaagagga-gagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattca-tcataa 212  Q
    ||||||||||||||||  ||| |||| ||||||||||||||||||||||| |||||||| | |   ||| |||||||| |||||||||||||| ||||||    
T  20177599 cttgaagattcaagaattggaagagatcctaggagctaaagtgaagcttgggctaggaattggtgataattaaggtaatggggttagaattcaatcataa 20177500  T
Q  213 ttatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcatgatggttagaatccgtgctcctattatgat 312  Q
    | ||||| ||||||| ||||||||| |||||||  ||| ||||||||||||||||||||||||||||||| || |||||||| |||||||| ||||||||    
T  20177499 tcatttt-agtgtaatttttcaattattgtatgtttaagtgcttaattgagtaattgattaattgttcataattgttagaattcgtgctccaattatgat 20177401  T
Q  313 tttatgttt 321  Q
      |||||||    
T  20177400 gatatgttt 20177392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 115 - 312
Target Start/End: Complemental strand, 17609351 - 17609154
Alignment:
Q  115 cttgaagattcaagaagagg-agagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattc-atcataa 212  Q
    ||||||||||||||||| || ||||| ||||||||||||||||||||||| | |||||| |||  ||||||||||||||||||||||||||| |||||||    
T  17609351 cttgaagattcaagaagtggtagagatcctaggagctaaagtgaagcttgggttaggaatttgtgctaactaaggtaagggggttagaattcaatcataa 17609252  T
Q  213 ttatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcatgatggttagaatccgtgctcctattatgat 312  Q
    | |  |||||||||| ||||||||| |||||||| ||| ||||||||||||||| |||||| ||| ||||  | |||||||| |||||||  ||||||||    
T  17609251 tca--tttagtgtaatttttcaattattgtatgattaagtgcttaattgagtaagtgattagttgatcatagttgttagaattcgtgctctaattatgat 17609154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 115 - 282
Target Start/End: Original strand, 22143186 - 22143352
Alignment:
Q  115 cttgaagattcaagaagaggagagaa-cctaggagctaaagtgaagcttgagctagga--aattgatctaactaaggtaagggggttagaattcatcata 211  Q
    |||||||||||||||||||| ||| | ||||||||||||||||||||||| |||||||  |||||  ||||||||||||||||| |||||||||||||||    
T  22143186 cttgaagattcaagaagaggtgaggatcctaggagctaaagtgaagcttgggctaggattaattg--ctaactaaggtaagggg-ttagaattcatcata 22143282  T
Q  212 attatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcat 282  Q
    || ||||| ||||||| ||||||||| |||||||||||| ||||||||||  ||| |||||||||||||||    
T  22143283 atcatttt-agtgtaatttttcaattattgtatgaataagtgcttaattggataaatgattaattgttcat 22143352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 93 - 301
Target Start/End: Original strand, 37233663 - 37233870
Alignment:
Q  93 aaaagggttatcgaaggaggaacttgaagattcaagaagagg-agagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaa 191  Q
    ||||||||||  |||| || | ||||||||||||||||| || ||||| |||||||| |||||||||||||| |||||||| |||  |||| ||||||||    
T  37233663 aaaagggttagagaagaagaagcttgaagattcaagaagtggtagagatcctaggaggtaaagtgaagcttgggctaggaa-ttgtgctaattaaggtaa 37233761  T
Q  192 gggggttagaattca-tcataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcatgatggtta 290  Q
    ||||||||||||||| ||||||| ||||  ||||||| ||||||||| |||||| | ||| ||||||||||||||| ||| |||||||| ||  | ||||    
T  37233762 gggggttagaattcaatcataatcattt--agtgtaatttttcaattattgtattattaagtgcttaattgagtaagtgagtaattgttaatagttgtta 37233859  T
Q  291 gaatccgtgct 301  Q
    |||| ||||||    
T  37233860 gaattcgtgct 37233870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 141 - 322
Target Start/End: Original strand, 13376709 - 13376890
Alignment:
Q  141 cctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattca-tcataattatttttagtgtaaattttcaattgt 239  Q
    ||||||||||||||||||| ||| |||||||| | |   ||| ||||||||||||||||||||||| ||||||| ||||| ||||||| ||||||||| |    
T  13376709 cctaggagctaaagtgaagtttgggctaggaattggtgataattaaggtaagggggttagaattcaatcataatcatttt-agtgtaatttttcaattat 13376807  T
Q  240 tgtatgaataattgcttaattgagtaattgattaattgttcat-gatggttagaatccgtgctcctattatgattttatgtttg 322  Q
    ||||||| ||| ||||||||| ||||||||||||||||||||| |||| | ||||| |||||||  ||||||||  ||||||||    
T  13376808 tgtatgattaagtgcttaatttagtaattgattaattgttcatagatgatgagaat-cgtgctctaattatgatgatatgtttg 13376890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 142 - 282
Target Start/End: Complemental strand, 21195409 - 21195270
Alignment:
Q  142 ctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattca-tcataattatttttagt-gtaaattttcaattgt 239  Q
    |||||||||||||||||||||| |||||||  |||  ||||||||||||||||| |||||||||| ||||||| ||||  ||| |||| |||||| ||||    
T  21195409 ctaggagctaaagtgaagcttgggctaggat-ttgtgctaactaaggtaaggggtttagaattcaatcataatcattt--agttgtaatttttcatttgt 21195313  T
Q  240 tgtatgaataattgcttaattgagtaattgattaattgttcat 282  Q
    ||||||  ||| ||||||||||| ||| |||||||||||||||    
T  21195312 tgtatgtttaagtgcttaattgaataagtgattaattgttcat 21195270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 179 - 279
Target Start/End: Original strand, 27329656 - 27329754
Alignment:
Q  179 ctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgt 278  Q
    ||||||||||||||||||||||||||||||||||| |   ||| || || ||||||||| | |||||||||| || ||||||| ||||||||||||||||    
T  27329656 ctaactaaggtaagggggttagaattcatcataatca--cttattgcaatttttcaattatggtatgaataagtgtttaattgtgtaattgattaattgt 27329753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 179 - 282
Target Start/End: Original strand, 22403000 - 22403101
Alignment:
Q  179 ctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaatt-gttgtatgaataattgcttaattgagt-aattgattaatt 276  Q
    ||||||||||||||||||||||||||||||||||| | || | ||   |||||||||||  ||||||||| || |||||||||| || ||||||||||||    
T  22403000 ctaactaaggtaagggggttagaattcatcataatcacttattgt---aattttcaattatttgtatgaa-aagtgcttaattgggtgaattgattaatt 22403095  T
Q  277 gttcat 282  Q
    ||||||    
T  22403096 gttcat 22403101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 109 - 282
Target Start/End: Original strand, 35522172 - 35522343
Alignment:
Q  109 gaggaacttgaagattcaagaagaggagagaacctaggagctaaagtgaagcttgagcta-ggaaattgatctaactaaggtaagggggttagaattcat 207  Q
    |||||||||||||| |||||  | | ||||| | ||||||| ||| |||||| | ||||| ||| ||| |||||||||||||||||| ||||||||||||    
T  35522172 gaggaacttgaagaatcaaggggtgaagagagc-taggagcaaaattgaagcctaagctaaggagattaatctaactaaggtaagggagttagaattcat 35522270  T
Q  208 cataattatttttagtgtaaattttcaatt-gttgtatgaataattgcttaattgagt-aattgattaattgttcat 282  Q
    |||||| |   ||| || || |||||||||  ||||||||| ||  ||||||||| || ||||||||||||||||||    
T  35522271 cataatca---ttattgcaatttttcaattatttgtatgaa-aagggcttaattgggtgaattgattaattgttcat 35522343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 206
Target Start/End: Original strand, 8537762 - 8537825
Alignment:
Q  142 ctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattca 206  Q
    ||||||| |||||||||||||| |||||||  |||  |||||||||||||||| |||||||||||    
T  8537762 ctaggagttaaagtgaagcttgggctaggat-ttgtgctaactaaggtaagggagttagaattca 8537825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 206
Target Start/End: Original strand, 8603001 - 8603064
Alignment:
Q  142 ctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattca 206  Q
    ||||||| |||||||||||||| |||||||  |||  |||||||||||||||| |||||||||||    
T  8603001 ctaggagttaaagtgaagcttgggctaggat-ttgtgctaactaaggtaagggagttagaattca 8603064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 213
Target Start/End: Complemental strand, 35055151 - 35055079
Alignment:
Q  142 ctaggagctaaagtgaagcttgagctag-gaaattgatctaactaaggtaagggggttagaattcatcataat 213  Q
    |||||||| ||| |||||| | |||||| || ||| | ||||||||||||||||||||| |||||||||||||    
T  35055151 ctaggagcaaaattgaagcctaagctagagagattaacctaactaaggtaagggggttaaaattcatcataat 35055079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 178 - 213
Target Start/End: Original strand, 9783953 - 9783988
Alignment:
Q  178 tctaactaaggtaagggggttagaattcatcataat 213  Q
    |||| |||||||||||||||||||||||||||||||    
T  9783953 tctatctaaggtaagggggttagaattcatcataat 9783988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 213
Target Start/End: Complemental strand, 20346378 - 20346347
Alignment:
Q  182 actaaggtaagggggttagaattcatcataat 213  Q
    ||||||||||||||||||||||||||||||||    
T  20346378 actaaggtaagggggttagaattcatcataat 20346347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 177; Significance: 2e-95; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 109 - 325
Target Start/End: Original strand, 3065 - 3281
Alignment:
Q  109 gaggaacttgaagattcaagaagaggagagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattcatc 208  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  3065 gaggaacttgaagattcaagaagagaagagaacctaggagctaaagtgaagcttgggctagggaattgatctaactaaggtaagggggttagaattcatc 3164  T
Q  209 ataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcatgatggttagaatccgtgctcctatta 308  Q
    ||||| |||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  3165 ataatcatttttagtgtaaattttcaattgttgtatgattatgtgcttaattgagtaattgattaattgttcatgattgttagaattcgtgctcctatta 3264  T
Q  309 tgattttatgtttgtat 325  Q
    |||| ||||||||||||    
T  3265 tgatgttatgtttgtat 3281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 109 - 317
Target Start/End: Original strand, 24294341 - 24294549
Alignment:
Q  109 gaggaacttgaagattcaagaagaggagagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattcatc 208  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||| |||||||||||||||||||||||||||| | ||||||    
T  24294341 gaggagcttgaagattcaagaggaggagagaacctaggagctaaattgaagtttgagctagggaattgatctaactaaggtaagggggttaaagttcatc 24294440  T
Q  209 ataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcatgatggttagaatccgtgctcctatta 308  Q
    ||||| |||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| |||||||| |||||||| ||||    
T  24294441 ataatcatttttagtgtaaattttcaattgttgtatgaataaattcttaattgagtaattgattaattgttcatgattgttagaattcgtgctccaatta 24294540  T
Q  309 tgattttat 317  Q
    |||| ||||    
T  24294541 tgatgttat 24294549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 110 - 322
Target Start/End: Original strand, 31145999 - 31146212
Alignment:
Q  110 aggaacttgaagattcaagaagaggagagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattcatca 209  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||    
T  31145999 aggagcttgaagattcaagaagaggagagaacctaggagctaaagtgaagcttgggctagagaattgatctaactaaggtaagggggttagaattcatca 31146098  T
Q  210 taattatttttagtgtaaattttc-aattgttgtatgaataattgcttaattgagtaattgattaattgttcatgatggttagaatccgtgctcctatta 308  Q
    |||| || ||| |||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||| ||| || |||||||| |||| ||| ||||    
T  31146099 taatcatcttttgtgtaaattttcaaattgttgtatgaataagtgcttaactgagtaattgattaattgtccataattgttagaattcgtgttccaatta 31146198  T
Q  309 tgattttatgtttg 322  Q
    ||||  ||||||||    
T  31146199 tgatggtatgtttg 31146212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 116 - 322
Target Start/End: Complemental strand, 68413 - 68208
Alignment:
Q  116 ttgaagattcaagaagaggagagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattcatcataatta 215  Q
    ||||||||||||||   ||||||| ||||| |||||||||||||||||||||||| |||| || |||||||||||||||||||||||||||||||||| |    
T  68413 ttgaagattcaagagttggagaga-cctagaagctaaagtgaagcttgagctagggaattaatataactaaggtaagggggttagaattcatcataatca 68315  T
Q  216 tttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcatgatggttagaatccgtgctcctattatgatttt 315  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| || |||||||| |||||||| |||||||| ||    
T  68314 tttttagtataaattttcaattgttgtatgaataagtgcttaattgagtaatagattaattgttcataattgttagaattcgtgctccaattatgatgtt 68215  T
Q  316 atgtttg 322  Q
    |||||||    
T  68214 atgtttg 68208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 93 - 322
Target Start/End: Complemental strand, 722833 - 722607
Alignment:
Q  93 aaaagggttatcgaaggaggaacttgaagattcaagaagaggagagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaag 192  Q
    ||||||||||  ||||||  |||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||| |||||| |||||||||||||     
T  722833 aaaagggttagagaaggaaaaacttgaagattcaagaagatgagagaacctaggagctaaagtgaagtttgggctagggaattgaactaactaaggtaaa 722734  T
Q  193 ggggttagaattcatcataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcatgatggttaga 292  Q
    ||||||||||||||||||||| |  |||||||  ||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||| || |||| |    
T  722733 ggggttagaattcatcataatca--tttagtg-caatttgcaattgttgtatgaataagtgcttaattgagtaaatgattaattgttcataattgttaaa 722637  T
Q  293 atccgtgctcctattatgattttatgtttg 322  Q
    || |||||||| |||||||| |||||||||    
T  722636 attcgtgctccaattatgatattatgtttg 722607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 120 - 279
Target Start/End: Original strand, 22775044 - 22775203
Alignment:
Q  120 agattcaagaagaggagagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattcatcataattatttt 219  Q
    ||||||||||   |||||| ||||||||||||||||||| |||||| |||| |||||||||||||||||||||||||| ||||||||||||||| |||||    
T  22775044 agattcaagagttggagaggacctaggagctaaagtgaatcttgaggtagggaattgatctaactaaggtaagggggtaagaattcatcataatcatttt 22775143  T
Q  220 tagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgtt 279  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  22775144 tagtgtaaattttcaattgttgtatgaataagtgcttaattgagtaattgattaattgtt 22775203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 120 - 279
Target Start/End: Original strand, 22780422 - 22780581
Alignment:
Q  120 agattcaagaagaggagagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattcatcataattatttt 219  Q
    ||||||||||   |||||| ||||||||||||||||||| |||||| |||| |||||||||||||||||||||||||| ||||||||||||||| |||||    
T  22780422 agattcaagagttggagaggacctaggagctaaagtgaatcttgaggtagggaattgatctaactaaggtaagggggtaagaattcatcataatcatttt 22780521  T
Q  220 tagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgtt 279  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  22780522 tagtgtaaattttcaattgttgtatgaataagtgcttaattgagtaattgattaattgtt 22780581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 117 - 322
Target Start/End: Original strand, 23821467 - 23821670
Alignment:
Q  117 tgaagattcaagaagaggagagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattcatcataattat 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| ||||| |     
T  23821467 tgaagattcaagaagaggagagaacctaggagctaaagtgaagcttgagctagggaattgatctaactaaggtaagggggttagatttcattataatca- 23821565  T
Q  217 ttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcatgatggttagaatccgtgctcctattatgatttta 316  Q
     |||||||||| ||||||||| ||| |||  ||| ||||||||||||||| |||||||||||||||  | |||| ||| |||||||  |||||||| |||    
T  23821566 -tttagtgtaatttttcaattattgcatgcttaagtgcttaattgagtaagtgattaattgttcatagttgttaaaattcgtgctctaattatgatgtta 23821664  T
Q  317 tgtttg 322  Q
    ||||||    
T  23821665 tgtttg 23821670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 117 - 322
Target Start/End: Original strand, 23830546 - 23830749
Alignment:
Q  117 tgaagattcaagaagaggagagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattcatcataattat 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| ||||| |     
T  23830546 tgaagattcaagaagaggagagaacctaggagctaaagtgaagcttgagctagggaattgatctaactaaggtaagggggttagatttcattataatca- 23830644  T
Q  217 ttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcatgatggttagaatccgtgctcctattatgatttta 316  Q
     |||||||||| ||||||||| ||| |||  ||| ||||||||||||||| |||||||||||||||  | |||| ||| |||||||  |||||||| |||    
T  23830645 -tttagtgtaatttttcaattattgcatgcttaagtgcttaattgagtaagtgattaattgttcatagttgttaaaattcgtgctctaattatgatgtta 23830743  T
Q  317 tgtttg 322  Q
    ||||||    
T  23830744 tgtttg 23830749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 115 - 282
Target Start/End: Complemental strand, 19666950 - 19666784
Alignment:
Q  115 cttgaagattcaagaagaggagagaa-cctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattcatcataat 213  Q
    |||||||||||||||||||| ||| | ||||||||||||||||||| ||| |||||||| |||  |||| ||||||||||||||||||||||||||||||    
T  19666950 cttgaagattcaagaagaggtgaggatcctaggagctaaagtgaagtttgggctaggaatttgtgctaattaaggtaagggggttagaattcatcataat 19666851  T
Q  214 tatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcat 282  Q
     |  |||||||||| ||||||||| |||||||||||| ||||||||||| ||| |||||||||||||||    
T  19666850 ca--tttagtgtaatttttcaattattgtatgaataaatgcttaattgaataagtgattaattgttcat 19666784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 115 - 281
Target Start/End: Complemental strand, 43646318 - 43646150
Alignment:
Q  115 cttgaagattcaagaagagg-agagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattca-tcataa 212  Q
    ||||||||||||||||  || ||||| ||||||||||||||||||||||| |||||||| | |   ||| ||||||||||||||||||||||| ||||||    
T  43646318 cttgaagattcaagaattggtagagatcctaggagctaaagtgaagcttgggctaggaattggtgataattaaggtaagggggttagaattcagtcataa 43646219  T
Q  213 ttatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttca 281  Q
    | ||||||||||||||||| |||||||||||||||||| || |||||||||||| ||||||||||||||    
T  43646218 tcatttttagtgtaaatttccaattgttgtatgaataagtgtttaattgagtaaatgattaattgttca 43646150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 142 - 282
Target Start/End: Original strand, 19668961 - 19669100
Alignment:
Q  142 ctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgttg 241  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||||| | ||||||||||| ||||||||| |||    
T  19668961 ctaggagctaaagtgaagcttgagctagggaattaatctaactaaggtaacggggttagaattcatcataatca-ttttagtgtaatttttcaattattg 19669059  T
Q  242 tatgaataattgcttaattgagtaattgattaattgttcat 282  Q
    ||||||||| || |||||||  ||| |||||||||||||||    
T  19669060 tatgaataagtgattaattggataaatgattaattgttcat 19669100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 142 - 325
Target Start/End: Original strand, 22579715 - 22579896
Alignment:
Q  142 ctaggagctaaagtgaagcttgagctaggaa-attgatctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgtt 240  Q
    |||||||||||| |||||| | ||||||| | ||| || |||||||||||||||||||||||||||||||||| | | ||   | || ||||||||| ||    
T  22579715 ctaggagctaaattgaagcctaagctagggagattaatttaactaaggtaagggggttagaattcatcataatcactatt---gcaatttttcaattatt 22579811  T
Q  241 gtatgaataattgcttaattgagtaattgattaattgttcatgatggttagaatccgtgctcctattatgattttatgtttgtat 325  Q
    |||||||||| |||||||||| |||||||||||||||||||| || |||||||| |||||||| ||||||||   ||||||||||    
T  22579812 gtatgaataagtgcttaattgtgtaattgattaattgttcataattgttagaattcgtgctccaattatgatgacatgtttgtat 22579896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 110 - 322
Target Start/End: Complemental strand, 25305860 - 25305647
Alignment:
Q  110 aggaacttgaagattcaagaagagga-gagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattca-t 207  Q
    |||| ||||||||||||||||  ||| |||| |||||||| |||||||||||||| |||| ||| | |   ||| ||||||||||||||||||||||| |    
T  25305860 aggagcttgaagattcaagaattggaagagatcctaggagttaaagtgaagcttgggctatgaattggtgataattaaggtaagggggttagaattcaat 25305761  T
Q  208 cataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcatgatggttagaatccgtgctcctatt 307  Q
    |||||| ||||| ||| ||| ||| |||||||||||||||||| ||||||||||||||| ||||||||||||||   | |||| ||| |||||||  |||    
T  25305760 cataatcatttt-agtataattttacaattgttgtatgaataagtgcttaattgagtaaatgattaattgttcaaagttgttataattcgtgctctaatt 25305662  T
Q  308 atgattttatgtttg 322  Q
    |||||  ||||||||    
T  25305661 atgatgatatgtttg 25305647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 109 - 283
Target Start/End: Complemental strand, 27262232 - 27262058
Alignment:
Q  109 gaggaacttgaagattcaagaagaggagagaacctaggagctaaagtgaagcttgagctaggaa-attgatctaactaaggtaagggggttagaattcat 207  Q
    |||||||||||||| ||||| |  || |  || |||||||||||| |||||| | ||||||| | ||| |||||||||||||||||| ||||||||||||    
T  27262232 gaggaacttgaagaatcaaggattgggggaaagctaggagctaaattgaagcctaagctagggagattaatctaactaaggtaagggagttagaattcat 27262133  T
Q  208 cataattatttttagtgtaaattttcaattgttgtatgaataattgcttaatt-gagtaattgattaattgttcatg 283  Q
    |||||| |  |||| || || ||||||||| |||||||||||| ||||||||| ||  |||||||||||||||||||    
T  27262132 cataatca--tttattgcaatttttcaattattgtatgaataagtgcttaattggatgaattgattaattgttcatg 27262058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 81 - 282
Target Start/End: Original strand, 24571082 - 24571283
Alignment:
Q  81 ggagcagagaggaaaagggttatcga--aggaggaacttgaagattcaagaagaggagaga-acctaggagctaaagtgaagcttgagctaggaa-attg 176  Q
    |||||| |||||||||||||||  ||  ||| |||||||||||| |||| ||  ||| ||| | |||||||||||| ||||| || || |||| | |||     
T  24571082 ggagcaaagaggaaaagggttagagagaagggggaacttgaagaatcaaaaattgga-agagagctaggagctaaattgaagtttaagatagggagatta 24571180  T
Q  177 atctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaatt 276  Q
    ||||||||||||| ||||||||||||||||||||||| ||| ||   | ||  |||||||| |||||||||||| |||||||||| ||||||||||||||    
T  24571181 atctaactaaggttagggggttagaattcatcataatcattatt---gcaatgtttcaattattgtatgaataaatgcttaattgggtaattgattaatt 24571277  T
Q  277 gttcat 282  Q
    ||||||    
T  24571278 gttcat 24571283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 177 - 283
Target Start/End: Complemental strand, 25602384 - 25602279
Alignment:
Q  177 atctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagt-aattgattaat 275  Q
    ||||||||||||||||||||||||||||||||||||| |  |||| || || ||||||||| |||||||||||| |||||||||| || |||||||||||    
T  25602384 atctaactaaggtaagggggttagaattcatcataatca--tttattgcaatttttcaattattgtatgaataagtgcttaattgggtgaattgattaat 25602287  T
Q  276 tgttcatg 283  Q
    ||||||||    
T  25602286 tgttcatg 25602279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 117 - 280
Target Start/End: Complemental strand, 19660299 - 19660138
Alignment:
Q  117 tgaagattcaagaagaggagagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattcatcataattat 216  Q
    |||||||||||||   ||||||| ||||||||||||||||||||||| |||||||| | |   ||| |||||||| ||||||||||||||||||||| |     
T  19660299 tgaagattcaagagttggagagatcctaggagctaaagtgaagcttgggctaggaattggtgataattaaggtaa-ggggttagaattcatcataatca- 19660202  T
Q  217 ttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttc 280  Q
     |||||||||| |||||| ||||||||||| ||| || ||||| || ||| |||||| ||||||    
T  19660201 ctttagtgtaatttttcatttgttgtatgattaagtgtttaatggaataagtgattatttgttc 19660138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 81 - 213
Target Start/End: Complemental strand, 7321976 - 7321843
Alignment:
Q  81 ggagcagagaggaaaagggttatcga-aggaggaacttgaagattcaagaagaggagaga-acctaggagctaaagtgaagcttgagctaggaaattgat 178  Q
    |||||| |||||||||||||||  || | |||||||||||||||||||| |  ||| ||| | |||||||||||| ||||| ||||||| || |||| ||    
T  7321976 ggagcaaagaggaaaagggttagagagaagaggaacttgaagattcaaggattgga-agagatctaggagctaaattgaagtttgagcttgggaattaat 7321878  T
Q  179 ctaactaaggtaagggggttagaattcatcataat 213  Q
    ||||||||||||||||||||||||||||| |||||    
T  7321877 ctaactaaggtaagggggttagaattcattataat 7321843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 197 - 282
Target Start/End: Original strand, 24087295 - 24087378
Alignment:
Q  197 ttagaattcatcataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcat 282  Q
    ||||||||||||||||| ||||| ||||||| |||||| ||||||||||| ||| ||||||||||||||| ||||||||| |||||    
T  24087295 ttagaattcatcataatcatttt-agtgtaatttttca-ttgttgtatgattaagtgcttaattgagtaagtgattaattattcat 24087378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 142 - 282
Target Start/End: Complemental strand, 271564 - 271426
Alignment:
Q  142 ctaggagctaaagtgaagcttgagcta-ggaaattgatctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgtt 240  Q
    |||||||| ||| |||||| | ||||| ||| ||| | ||||||||||||||||||||||||||||||||||| |   ||| || || ||||||||| ||    
T  271564 ctaggagcaaaattgaagcctaagctaaggagattaacctaactaaggtaagggggttagaattcatcataatca---ttattgcaatttttcaattatt 271468  T
Q  241 gtatgaataattgcttaattgagt-aattgattaattgttcat 282  Q
    ||||||| || |||||||||| || |||||||||||| |||||    
T  271467 gtatgaa-aagtgcttaattgggtgaattgattaattattcat 271426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 177 - 282
Target Start/End: Original strand, 4448021 - 4448124
Alignment:
Q  177 atctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaatt-gttgtatgaataattgcttaattgagt-aattgattaa 274  Q
    ||||||||||||||||||||||||||||||||||||| |   ||| || || |||||||||  || |||||| || ||||||||||||| ||||||||||    
T  4448021 atctaactaaggtaagggggttagaattcatcataatca---ttattgcaatttttcaattatttatatgaa-aagtgcttaattgagtgaattgattaa 4448116  T
Q  275 ttgttcat 282  Q
    ||||||||    
T  4448117 ttgttcat 4448124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 177 - 282
Target Start/End: Complemental strand, 28974407 - 28974305
Alignment:
Q  177 atctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagt-aattgattaat 275  Q
    ||||||||||||||||||||||||||||||||||||| |   ||| |  || ||||||||| ||||||||| || |||||||||  || |||||||||||    
T  28974407 atctaactaaggtaagggggttagaattcatcataatca---ttatttcaatttttcaattattgtatgaa-aagtgcttaatttggtgaattgattaat 28974312  T
Q  276 tgttcat 282  Q
    |||||||    
T  28974311 tgttcat 28974305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 213
Target Start/End: Original strand, 36890576 - 36890610
Alignment:
Q  179 ctaactaaggtaagggggttagaattcatcataat 213  Q
    |||||||||||||||||||||||||||||||||||    
T  36890576 ctaactaaggtaagggggttagaattcatcataat 36890610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 213
Target Start/End: Original strand, 23836599 - 23836630
Alignment:
Q  182 actaaggtaagggggttagaattcatcataat 213  Q
    ||||||||||||||||||||||||||||||||    
T  23836599 actaaggtaagggggttagaattcatcataat 23836630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 115 - 234
Target Start/End: Complemental strand, 24885062 - 24884943
Alignment:
Q  115 cttgaagattcaagaagagg-agagaacctaggagctaaagtgaagcttgag-ctaggaaattgatctaactaaggtaagggggttagaattc-atcata 211  Q
    ||||||||||||||||  || ||||| ||||||||||||| ||||| ||| | ||||||| |||  || |||||||||||||||||| ||||| ||||||    
T  24885062 cttgaagattcaagaactggtagagatcctaggagctaaattgaagtttggggctaggaa-ttgtgcttactaaggtaagggggttataattcaatcata 24884964  T
Q  212 attatttttagtgtaaattttca 234  Q
    || |  |||||||||| ||||||    
T  24884963 atca--tttagtgtaatttttca 24884943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 213
Target Start/End: Original strand, 25875814 - 25875845
Alignment:
Q  182 actaaggtaagggggttagaattcatcataat 213  Q
    ||||||||||||||||||||||||||||||||    
T  25875814 actaaggtaagggggttagaattcatcataat 25875845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 172; Significance: 2e-92; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 81 - 320
Target Start/End: Original strand, 32965939 - 32966178
Alignment:
Q  81 ggagcagagaggaaaagggttatcgaaggaggaacttgaagattcaagaagaggagagaacctaggagctaaagtgaagcttgagctaggaaattgatct 180  Q
    |||||| |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  32965939 ggagcaaagaggaaaagggttagagaaggaggaacttgaagattcaagaagaggagagaacctaggagctaaagtgaagcttgggctagggaattgatct 32966038  T
Q  181 aactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttc 280  Q
    |||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||| ||||||||||||||| |||||||||||||    
T  32966039 aactaaggtaagagggttagaattcatcataatcatttttagtgtgaattttcaattgttgtataaataagtgcttaattgagtaaatgattaattgttc 32966138  T
Q  281 atgatggttagaatccgtgctcctattatgattttatgtt 320  Q
    || || |||| ||| |||||||| |||||||| |||||||    
T  32966139 ataattgttaaaattcgtgctccaattatgatgttatgtt 32966178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 93 - 322
Target Start/End: Complemental strand, 28902636 - 28902407
Alignment:
Q  93 aaaagggttatcgaaggaggaacttgaagattcaagaagaggagagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaag 192  Q
    ||||||||||  ||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  28902636 aaaagggttagagaaagagaagcttgaagattcaagaagaggagagaacctaggagctaaagtgaagcttgggctagggaattgatctaactaaggtaag 28902537  T
Q  193 ggggttagaattcatcataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcatgatggttaga 292  Q
    ||||||||||||||||||||| |||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||    
T  28902536 ggggttagaattcatcataatcatttgtagtgttaattttcaattgttgtatgaataagtgcttaattgagtaattgattaattgttcataattgttaga 28902437  T
Q  293 atccgtgctcctattatgattttatgtttg 322  Q
    || |||||||| |||||||| |||||||||    
T  28902436 attcgtgctccaattatgatgttatgtttg 28902407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 93 - 322
Target Start/End: Complemental strand, 28939031 - 28938802
Alignment:
Q  93 aaaagggttatcgaaggaggaacttgaagattcaagaagaggagagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaag 192  Q
    ||||||||||  ||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  28939031 aaaagggttagagaaagagaagcttgaagattcaagaagaggagagaacctaggagctaaagtgaagcttgggctagggaattgatctaactaaggtaag 28938932  T
Q  193 ggggttagaattcatcataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcatgatggttaga 292  Q
    ||||||||||||||||||||| |||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||    
T  28938931 ggggttagaattcatcataatcatttgtagtgttaattttcaattgttgtatgaataagtgcttaattgagtaattgattaattgttcataattgttaga 28938832  T
Q  293 atccgtgctcctattatgattttatgtttg 322  Q
    || |||||||| |||||||| |||||||||    
T  28938831 attcgtgctccaattatgatgttatgtttg 28938802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 109 - 322
Target Start/End: Complemental strand, 3674290 - 3674078
Alignment:
Q  109 gaggaacttgaagattcaagaagaggagagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattcatc 208  Q
    ||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  3674290 gaggagcttgaagattcaagaagaggagaggatctaggagctaaagtgaagcttgagctagggaattaatctaactaaggtaagggggttagaattcatc 3674191  T
Q  209 ataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcatgatggttagaatccgtgctcctatta 308  Q
    ||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || |||||||| |||||||  ||||    
T  3674190 ataatcatttttagtgt-aattttcaattgttgtatgaataagtgcttaattgagtaattgattaattgttcataattgttagaattcgtgctcaaatta 3674092  T
Q  309 tgattttatgtttg 322  Q
    ||||  ||||||||    
T  3674091 tgatgatatgtttg 3674078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 109 - 322
Target Start/End: Complemental strand, 16595935 - 16595723
Alignment:
Q  109 gaggaacttgaagattcaagaagaggagagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattcatc 208  Q
    ||||| |||||||||||||||   |||||| ||||||||||||||||||| ||||||||| | |||| |||| |||||||||||||||||||||||||||    
T  16595935 gaggagcttgaagattcaagagttggagaggacctaggagctaaagtgaaacttgagctatggaattaatcttactaaggtaagggggttagaattcatc 16595836  T
Q  209 ataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcatgatggttagaatccgtgctcctatta 308  Q
    ||||| ||||| ||||||||||||||||| |||||||||||| ||||||||||||||||||| ||||||||||| || |||||||| |||||||| ||||    
T  16595835 ataatcatttt-agtgtaaattttcaattattgtatgaataagtgcttaattgagtaattgactaattgttcataattgttagaattcgtgctccaatta 16595737  T
Q  309 tgattttatgtttg 322  Q
    |||| |||||||||    
T  16595736 tgatgttatgtttg 16595723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 105 - 282
Target Start/End: Original strand, 21296990 - 21297166
Alignment:
Q  105 gaaggaggaacttgaagattcaagaagaggagagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaatt 204  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||||||||||||||||||||||||    
T  21296990 gaaggagaagcttgaagattcaagaagaggagagaacctaggagctaaagtgaagcttgggatagggaattgatctaactaaggtaagggggttagaatt 21297089  T
Q  205 catcataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcat 282  Q
    ||||||||||| ||||||||||| |||||| ||||||||||| ||| ||||||||||||||| |||||||||||||||    
T  21297090 catcataatta-ttttagtgtaatttttcatttgttgtatgattaagtgcttaattgagtaagtgattaattgttcat 21297166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 109 - 312
Target Start/End: Complemental strand, 23494350 - 23494145
Alignment:
Q  109 gaggaacttgaagattcaagaa---gaggagagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattc 205  Q
    |||||||||||||||||||| |   || ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| ||    
T  23494350 gaggaacttgaagattcaaggattggaagagagaacctaggagctaaagtgaagcttgagctagggaattaatctaactaaggtaagggggttagaaatc 23494251  T
Q  206 atcataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcatgatggttagaatccgtgctccta 305  Q
    |||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||||  ||||||||||||| || |||||||| |||||||| |    
T  23494250 atcataatcatttttagtgtaaa-tttcaattgttgtatgaataagtgcttaattgagtaatcaattaattgttcataattgttagaattcgtgctccaa 23494152  T
Q  306 ttatgat 312  Q
     ||||||    
T  23494151 ctatgat 23494145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 109 - 322
Target Start/End: Original strand, 5450660 - 5450874
Alignment:
Q  109 gaggaacttgaagattcaagaagagga-gagaacctaggagctaaagtgaagcttgagctaggaaattgatc-taactaaggtaagggggttagaattca 206  Q
    ||||| ||||||||||||||||  ||| |||| ||||||||||||||||||||||| |||||||| |||||  ||| |||||||||||||||||||||||    
T  5450660 gaggagcttgaagattcaagaattggaagagatcctaggagctaaagtgaagcttgggctaggaa-ttgataataattaaggtaagggggttagaattca 5450758  T
Q  207 tcataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcatgatggttagaatccgtgctcctat 306  Q
    ||||||| ||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||| || |||||||| | |||||| ||    
T  5450759 tcataatcatttttagtgtaaattttcaattgttgcataaataaatgcttaattgagtaattgattaattgttcataattgttagaattcatgctccaat 5450858  T
Q  307 tatgattttatgtttg 322  Q
    |||||| |||||||||    
T  5450859 tatgatgttatgtttg 5450874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 109 - 311
Target Start/End: Complemental strand, 7728849 - 7728647
Alignment:
Q  109 gaggaacttgaagattcaa-gaagaggagagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattcat 207  Q
    ||||||||||||||||||| ||  || ||||| | ||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||||||||    
T  7728849 gaggaacttgaagattcaaagattagaagagagc-taggagctaaagtgaagctagagccagggaattgatctaactaaggtaagggggttagaattcat 7728751  T
Q  208 cataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcatgatggttagaatccgtgctcctatt 307  Q
    |||||| |||||| ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| || |||||||| ||| |||| |||    
T  7728750 cataatcatttttggtgtaaattttcatttgttgtatgaataagtgcttaattgagtaattgattaattgttcataattgttagaattcgtactccaatt 7728651  T
Q  308 atga 311  Q
    ||||    
T  7728650 atga 7728647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 115 - 322
Target Start/End: Complemental strand, 432884 - 432679
Alignment:
Q  115 cttgaagattcaagaagagg-agagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattcatcataat 213  Q
    ||||||||||||||||  || |||| | |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  432884 cttgaagattcaagaattggaagag-agctaggagctaaagtgaagctagagctagggaattgatctaactaaggtaagggggttagaattcatcataat 432786  T
Q  214 tatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcatgatggttagaatccgtgctcctattatgatt 313  Q
     |  |||| || || ||||||||||||| |||||||| ||||||||||||||| |||||||||| |||| || |||| ||| || ||||| ||||||||     
T  432785 ca--tttactgcaatttttcaattgttgcatgaataagtgcttaattgagtaaatgattaattgatcataattgttaaaattcgcgctccaattatgatg 432688  T
Q  314 ttatgtttg 322  Q
     ||||||||    
T  432687 atatgtttg 432679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 138 - 282
Target Start/End: Original strand, 21310557 - 21310700
Alignment:
Q  138 gaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaatt 237  Q
    ||||||||||| |||||||||||||| |||||| |||||||| ||||||||||||||||||| ||||||||||||| | ||||||||||| |||||| ||    
T  21310557 gaacctaggagataaagtgaagcttgggctagggaattgatccaactaaggtaagggggttaaaattcatcataatca-ttttagtgtaatttttcattt 21310655  T
Q  238 gttgtatgaataattgcttaattgagtaattgattaattgttcat 282  Q
    ||||||||| ||| ||||||||||||||| |||||||||||||||    
T  21310656 gttgtatgattaagtgcttaattgagtaagtgattaattgttcat 21310700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 115 - 282
Target Start/End: Complemental strand, 37983787 - 37983620
Alignment:
Q  115 cttgaagattcaagaagagg-agagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattc-atcataa 212  Q
    ||||||||||||||||| || ||||| ||||||||||||||||||||||| ||||| || |||  ||||||||||||||||||||||||||| |||||||    
T  37983787 cttgaagattcaagaagtggtagagatcctaggagctaaagtgaagcttgggctagaaatttgtgctaactaaggtaagggggttagaattcaatcataa 37983688  T
Q  213 ttatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcat 282  Q
    | |  |||||||||| |||||| ||||||||||| ||| ||||||||||||||| |||||||||||||||    
T  37983687 tca--tttagtgtaatttttcatttgttgtatgattaagtgcttaattgagtaagtgattaattgttcat 37983620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 88 - 322
Target Start/End: Original strand, 21222406 - 21222639
Alignment:
Q  88 agaggaaaagggttatcgaaggaggaacttgaagattcaagaagagg-agagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaa 186  Q
    |||||||||||||||  |||| || | ||||||||||||||||  || ||||| ||||||||||||||||||||||| |||||||| | |   ||| |||    
T  21222406 agaggaaaagggttagagaagaagaagcttgaagattcaagaattggtagagatcctaggagctaaagtgaagcttgggctaggaattggtgataattaa 21222505  T
Q  187 ggtaagggggttagaattca-tcataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcatgat 285  Q
    |||| |||||||||| |||| ||||||||||||  ||||||| ||||||||| |||||||| ||| ||||||||||||| |||||||||||||||||  |    
T  21222506 ggtatgggggttagagttcaatcataattattt--agtgtaatttttcaattattgtatgattaagtgcttaattgagt-attgattaattgttcatagt 21222602  T
Q  286 ggttagaatccgtgctcctattatgattttatgtttg 322  Q
     |||||||| |||||||  ||||||||  ||||||||    
T  21222603 tgttagaattcgtgctctaattatgatgatatgtttg 21222639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 93 - 322
Target Start/End: Complemental strand, 21617461 - 21617232
Alignment:
Q  93 aaaagggttatcgaaggaggaacttgaagattcaagaagagg-agagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaa 191  Q
    ||||||||||  |||| || | ||||||||||||||||| || ||||| ||||||||||||||||||| ||| |||||||| |||  |||| ||||||||    
T  21617461 aaaagggttagagaagaagaagcttgaagattcaagaagtggtagagatcctaggagctaaagtgaaggttgggctaggaa-ttgtgctaattaaggtaa 21617363  T
Q  192 gggggttagaattca-tcataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcatga-tggtt 289  Q
    ||||||||||||||| ||||||| ||||  ||||||| ||||||||| |||||||| ||| |||||||||||||||  |||||||||||||| | | |||    
T  21617362 gggggttagaattcaatcataatcattt--agtgtaatttttcaattattgtatgattaagtgcttaattgagtaagggattaattgttcattagttgtt 21617265  T
Q  290 agaatccgtgctcctattatgattttatgtttg 322  Q
    ||||| |||||||  ||||||||  ||||||||    
T  21617264 agaattcgtgctctaattatgatgatatgtttg 21617232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 115 - 280
Target Start/End: Original strand, 24225171 - 24225335
Alignment:
Q  115 cttgaagattcaagaagagg-agagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattca-tcataa 212  Q
    ||||||||||||||||| || ||||| ||||||||||||||||||||||| |||||||| |||  |||||||||||||||| ||||||||||| ||||||    
T  24225171 cttgaagattcaagaagtggtagagatcctaggagctaaagtgaagcttgggctaggaa-ttgtgctaactaaggtaagggagttagaattcaatcataa 24225269  T
Q  213 ttatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttc 280  Q
    | ||||  ||||||| |||||| | ||||||||  ||| ||||||||||| ||| |||||||||||||    
T  24225270 tcattt--agtgtaatttttcactagttgtatggttaagtgcttaattgattaagtgattaattgttc 24225335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 142 - 282
Target Start/End: Complemental strand, 19405934 - 19405794
Alignment:
Q  142 ctaggagctaaagtgaagcttgagctaggaa-attgatctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgtt 240  Q
    |||||||||||| |||||| | ||||||| | ||| ||||||||||||||||||||||||||||||||||||| |  |||| || || ||||||||| ||    
T  19405934 ctaggagctaaattgaagcctaagctagggagattaatctaactaaggtaagggggttagaattcatcataatca--tttattgcaatttttcaattatt 19405837  T
Q  241 gtatgaataattgcttaattgagt-aattgattaattgttcat 282  Q
    |||||||||| |||||||||| || ||||||||||||||||||    
T  19405836 gtatgaataagtgcttaattgggtgaattgattaattgttcat 19405794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 142 - 310
Target Start/End: Complemental strand, 23466830 - 23466664
Alignment:
Q  142 ctaggagctaaagtgaagcttgagctaggaa-attgatctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgtt 240  Q
    |||||||| ||| |||||| | ||||||| | ||| ||||||||||||||||||||||||||||||||||||| | || | |    ||||||||||| ||    
T  23466830 ctaggagcaaaattgaagcctaagctagggagattaatctaactaaggtaagggggttagaattcatcataatcaattattgc---aattttcaattatt 23466734  T
Q  241 gtatgaataattgcttaattgagtaattgattaattgttcatgatggttagaatccgtgctcctattatg 310  Q
    |||||||||| || ||||||| |||||||||||||||||||| ||  ||||||| |||||||| ||||||    
T  23466733 gtatgaataagtgattaattgtgtaattgattaattgttcataattattagaattcgtgctccaattatg 23466664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 184 - 322
Target Start/End: Complemental strand, 19862563 - 19862425
Alignment:
Q  184 taaggtaagggggttagaattca-tcataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcat 282  Q
    ||||||||||||||||||||||| ||||||| ||||| ||||||| |||||| ||||||||||||||| ||||||||||||||| |||||||||||||||    
T  19862563 taaggtaagggggttagaattcaatcataatcatttt-agtgtaatttttcatttgttgtatgaataagtgcttaattgagtaagtgattaattgttcat 19862465  T
Q  283 -gatggttagaatccgtgctcctattatgattttatgtttg 322  Q
     ||| |||| ||| |||||||  ||||||||  ||||||||    
T  19862464 agat-gttaaaattcgtgctctaattatgatgatatgtttg 19862425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 142 - 282
Target Start/End: Original strand, 11337038 - 11337177
Alignment:
Q  142 ctaggagctaaagtgaagcttgagctaggaa-attgatctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgtt 240  Q
    |||||||| ||| |||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||| |||| | |    ||||||||||| ||    
T  11337038 ctaggagcaaaattgaagcttgagctagggagattaatctaactaaggtaagggggttagaattcatcataatcatttattg---caattttcaattatt 11337134  T
Q  241 gtatgaataattgcttaatt-gagtaattgattaattgttcat 282  Q
    |||||||||| ||||||||| ||  ||||| ||||||||||||    
T  11337135 gtatgaataagtgcttaattggatgaattggttaattgttcat 11337177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 142 - 282
Target Start/End: Original strand, 24182984 - 24183123
Alignment:
Q  142 ctaggagctaaagtgaagcttgagctaggaa-attgatctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaatt-gt 239  Q
    |||||||| ||| |||||| | ||||||| | ||| ||||||||||||||||||||||||||||||||||||| |   ||| || || |||||||||  |    
T  24182984 ctaggagcaaaattgaagcctaagctagggagattaatctaactaaggtaagggggttagaattcatcataatca---ttattgcaatttttcaattatt 24183080  T
Q  240 tgtatgaataattgcttaattgagt-aattgattaattgttcat 282  Q
    |||||||| || |||||||||| || ||||||||||||||||||    
T  24183081 tgtatgaa-aagtgcttaattgggtgaattgattaattgttcat 24183123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 142 - 282
Target Start/End: Complemental strand, 20712471 - 20712331
Alignment:
Q  142 ctaggagctaaagtgaagcttgagctag-gaaattgatctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaatt-gt 239  Q
    |||||||| ||| |||||| | |||||| |||||| | ||||||||||||||||||||||||||||||||||| |   ||| |   |||||||||||  |    
T  20712471 ctaggagcaaaattgaagcctaagctagagaaattaacctaactaaggtaagggggttagaattcatcataatca--cttatttgcaattttcaattact 20712374  T
Q  240 tgtatgaataattgcttaattgagt-aattgattaattgttcat 282  Q
    |||||||| || ||||||||||||| ||||||||||||||||||    
T  20712373 tgtatgaa-aagtgcttaattgagtgaattgattaattgttcat 20712331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 177 - 262
Target Start/End: Original strand, 22662570 - 22662652
Alignment:
Q  177 atctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattga 262  Q
    |||||||||||||||||||| |||||||||||||||| |  |||||||| | |||||| ||||||||||||||| || ||||||||    
T  22662570 atctaactaaggtaagggggatagaattcatcataatca--tttagtgt-agttttcatttgttgtatgaataagtgtttaattga 22662652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 113 - 273
Target Start/End: Complemental strand, 25005240 - 25005082
Alignment:
Q  113 aacttgaagattcaagaagaggagagaacctaggagctaaagtgaagcttgagctaggaaattgatc--taactaaggtaagggggttagaattcatcat 210  Q
    |||||||||| |||||||  |||| ||| ||||||||||||||||||| | || | |||  || |||  || |||| |||||||||||||  ||||||||    
T  25005240 aacttgaagaatcaagaattggagtgaatctaggagctaaagtgaagcctaagtttgga--ttaatcattatctaaagtaagggggttagtcttcatcat 25005143  T
Q  211 aattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgatta 273  Q
    ||| ||||  ||| ||  |||||||||||||||||||||| |||| |||||| ||| ||||||    
T  25005142 aatcattt--agtttagtttttcaattgttgtatgaataagtgctcaattgaataagtgatta 25005082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 282
Target Start/End: Complemental strand, 21397449 - 21397348
Alignment:
Q  179 ctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaatt-gttgtatgaataattgcttaatt-gagtaattgattaatt 276  Q
    ||||||||||||||||||||||||||||||||||| | || | ||   |||||||||||  ||||||||| || ||||||||| ||  ||||||||||||    
T  21397449 ctaactaaggtaagggggttagaattcatcataatcacttattgt---aattttcaattatttgtatgaa-aagtgcttaattggatgaattgattaatt 21397354  T
Q  277 gttcat 282  Q
    ||||||    
T  21397353 gttcat 21397348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 282
Target Start/End: Complemental strand, 4865615 - 4865518
Alignment:
Q  182 actaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaatt-gttgtatgaataattgcttaatt-gagtaattgattaattgtt 279  Q
    |||||||||||||||||||||||||||||||| | |||| ||   |||||||||||  ||||||| |||| ||||||||| ||  |||||||||||||||    
T  4865615 actaaggtaagggggttagaattcatcataatcactttt-gt---aattttcaattatttgtatg-ataagtgcttaattggatgaattgattaattgtt 4865521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 282
Target Start/End: Complemental strand, 28261869 - 28261772
Alignment:
Q  182 actaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaatt-gttgtatgaataattgcttaatt-gagtaattgattaattgtt 279  Q
    |||||||||||||||||||||||||||||||| | |||| ||   |||||||||||  ||||||| |||| ||||||||| ||  |||||||||||||||    
T  28261869 actaaggtaagggggttagaattcatcataatcactttt-gt---aattttcaattatttgtatg-ataagtgcttaattggatgaattgattaattgtt 28261775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 93 - 160
Target Start/End: Original strand, 18530897 - 18530964
Alignment:
Q  93 aaaagggttatcgaaggaggaacttgaagattcaagaagaggagagaacctaggagctaaagtgaagc 160  Q
    ||||||||||  ||||||| |||||||||| |||||||  |||| || | ||||||||||||||||||    
T  18530897 aaaagggttagagaaggagaaacttgaagaatcaagaattggagtgagcttaggagctaaagtgaagc 18530964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 1168058 - 1168127
Alignment:
Q  142 ctaggagctaaagtgaagcttgagctaggaa-attgatctaactaaggtaagggggttagaattcatcata 211  Q
    |||||||| ||| |||||| | ||||||| | ||| ||||| |||||||||||||||||||||||||||||    
T  1168058 ctaggagcaaaattgaagcctaagctagggagattaatcta-ctaaggtaagggggttagaattcatcata 1168127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 213
Target Start/End: Complemental strand, 11584405 - 11584376
Alignment:
Q  184 taaggtaagggggttagaattcatcataat 213  Q
    ||||||||||||||||||||||||||||||    
T  11584405 taaggtaagggggttagaattcatcataat 11584376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 167; Significance: 2e-89; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 115 - 325
Target Start/End: Original strand, 37956849 - 37957059
Alignment:
Q  115 cttgaagattcaagaagaggagagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattcatcataatt 214  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||     
T  37956849 cttgaagatccaagaagaggagagaacctaggagctaaagtgaagcttgggctagggaattgatctaactaaggtaagggggttagaattcatcataatc 37956948  T
Q  215 atttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcatgatggttagaatccgtgctcctattatgattt 314  Q
    |||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||||| |    
T  37956949 atttttagtgtaaattttcaattgttgtatgattatttgtttaattgagtaattgattaattgttcatgattgttggaattcgtgctcctattatgatgt 37957048  T
Q  315 tatgtttgtat 325  Q
    |||||||||||    
T  37957049 tatgtttgtat 37957059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 142 - 325
Target Start/End: Original strand, 19821628 - 19821811
Alignment:
Q  142 ctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgttg 241  Q
    |||||||||||||||||||| || ||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||     
T  19821628 ctaggagctaaagtgaagctagaactagagaattgatctaactaaggtaagggggttagaattcatcataatcatttttagtgtcaattttcaattgttt 19821727  T
Q  242 tatgaataattgcttaattgagtaattgattaattgttcatgatggttagaatccgtgctcctattatgattttatgtttgtat 325  Q
    ||||||||| |||||||||||||||||||||||||| |||||||  ||||| | ||||||||||||||||| ||||||||||||    
T  19821728 tatgaataagtgcttaattgagtaattgattaattgatcatgattattagagttcgtgctcctattatgatgttatgtttgtat 19821811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 142 - 312
Target Start/End: Complemental strand, 27961366 - 27961197
Alignment:
Q  142 ctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgttg 241  Q
    |||||||| |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||    
T  27961366 ctaggagcaaaagtgaagcttgagctagggaattaatctaactaaggtaagggggttagaattcatcataatcattgttagtgtaaa-tttcaattgttg 27961268  T
Q  242 tatgaataattgcttaattgagtaattgattaattgttcatgatggttagaatccgtgctcctattatgat 312  Q
    ||||||||| ||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||||    
T  27961267 tatgaataagtgcttaattgagtaattgattaattgttcataattgttagaatccgtgctccaattatgat 27961197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 89 - 322
Target Start/End: Complemental strand, 15045277 - 15045044
Alignment:
Q  89 gaggaaaagggttatcgaag-gaggaacttgaagattcaagaagaggagaga-acctaggagctaaagtgaagcttgagctaggaaattgatctaactaa 186  Q
    ||||||||||||||  || | |||||||||||||||||||| |  ||| ||| | ||||||||||| ||||||||||||||||| |||| ||||||||||    
T  15045277 gaggaaaagggttagagaggagaggaacttgaagattcaaggattgga-agagagctaggagctaaggtgaagcttgagctagggaattaatctaactaa 15045179  T
Q  187 ggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcatgatg 286  Q
    ||||||||||||||| ||||||||||| ||||| ||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||     
T  15045178 ggtaagggggttagatttcatcataatcatttt-agtttaaattctcaattgttgtatgaataagtgcttaattgagtaattgattaattgttcataatt 15045080  T
Q  287 gttagaatccgtgctcctattatgattttatgtttg 322  Q
    |||||||| |||||||| |||||||| |||||||||    
T  15045079 gttagaattcgtgctccaattatgatgttatgtttg 15045044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 89 - 322
Target Start/End: Original strand, 15109147 - 15109380
Alignment:
Q  89 gaggaaaagggttatcgaag-gaggaacttgaagattcaagaagaggagaga-acctaggagctaaagtgaagcttgagctaggaaattgatctaactaa 186  Q
    ||||||||||||||  || | |||||||||||||||||||| |  ||| ||| | ||||||||||| ||||||||||||||||| |||| ||||||||||    
T  15109147 gaggaaaagggttagagaggagaggaacttgaagattcaaggattgga-agagagctaggagctaaggtgaagcttgagctagggaattaatctaactaa 15109245  T
Q  187 ggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcatgatg 286  Q
    ||||||||||||||| ||||||||||| ||||| ||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||     
T  15109246 ggtaagggggttagatttcatcataatcatttt-agtttaaattctcaattgttgtatgaataagtgcttaattgagtaattgattaattattcataata 15109344  T
Q  287 gttagaatccgtgctcctattatgattttatgtttg 322  Q
    |||||||| | |||||| |||||||| |||||||||    
T  15109345 gttagaattcatgctccaattatgatgttatgtttg 15109380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 109 - 279
Target Start/End: Original strand, 41165774 - 41165944
Alignment:
Q  109 gaggaacttgaagattcaagaagaggagagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattcatc 208  Q
    ||||| ||||||||||||||||  ||||||  ||||||||||||||||||||||| |||||||| | |   ||| ||| |||||||||||||||||||||    
T  41165774 gaggagcttgaagattcaagaattggagagttcctaggagctaaagtgaagcttgggctaggaattggtgataattaacgtaagggggttagaattcatc 41165873  T
Q  209 ataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgtt 279  Q
    ||||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  41165874 ataatcatttttagtgtaaattttcaattgtggtatgaataagtgcttaattgagtaattgattaattgtt 41165944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 81 - 322
Target Start/End: Original strand, 13809301 - 13809541
Alignment:
Q  81 ggagcagagaggaaaagggttatcga-aggaggaacttgaagattcaagaagaggagaga-acctaggagctaaagtgaagcttgagctaggaaattgat 178  Q
    |||||| ||||||||||| |||  || | |||||||||||||||||||| |  || |||| | ||||| |||||| |||||||||||||||| |||| ||    
T  13809301 ggagcaaagaggaaaaggattagagagaagaggaacttgaagattcaaggattgg-gagagagctaggggctaaattgaagcttgagctagggaattaat 13809399  T
Q  179 ctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgt 278  Q
    ||||||||||||||||||||||||||||||||||| |||| |  ||  | ||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  13809400 ctaactaaggtaagggggttagaattcatcataatcatttat--tgccatttttcaattattgtatgaataagtgcttaattgagtaattgattaattgt 13809497  T
Q  279 tcatgatggttagaatccgtgctcctattatgattttatgtttg 322  Q
    |||| || |||||||| |||||||| ||||||||  ||||||||    
T  13809498 tcataattgttagaattcgtgctccaattatgatgatatgtttg 13809541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 88 - 311
Target Start/End: Complemental strand, 14901680 - 14901458
Alignment:
Q  88 agaggaaaagggttatcgaaggaggaacttgaagattcaagaagaggagagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaag 187  Q
    |||||||||||||||  ||||||| | |||||| |||||||| || | | ||||||||||| ||||||||||||| |||| ||  |||||||||||||||    
T  14901680 agaggaaaagggttagagaaggagaagcttgaatattcaagaggaagggggaacctaggagttaaagtgaagcttaagcttggggattgatctaactaag 14901581  T
Q  188 gtaagggggttagaattcatcataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcatgatgg 287  Q
    |||||||||||| | ||||||||||| | ||||| || || ||||||||| |||||||||||| ||||||||||||||| |||||||||||||||  | |    
T  14901580 gtaagggggttaaatttcatcataatca-ttttattgcaatttttcaattattgtatgaataagtgcttaattgagtaaatgattaattgttcatatttg 14901482  T
Q  288 ttagaatccgtgctcctattatga 311  Q
    ||| ||| |||||||  |||||||    
T  14901481 ttataattcgtgctctaattatga 14901458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 88 - 322
Target Start/End: Original strand, 7964509 - 7964743
Alignment:
Q  88 agaggaaaagggttatcgaaggaggaacttgaagattcaagaagagg-agagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaa 186  Q
    |||||||||||||||  | || || | ||||||||||||||||| || ||||| ||||||||||||||||||| ||| || ||||| |||  ||||||||    
T  7964509 agaggaaaagggttagaggagaagaagcttgaagattcaagaagtggtagagatcctaggagctaaagtgaagtttgggcaaggaatttgtgctaactaa 7964608  T
Q  187 ggtaagggggttagaattca-tcataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcatgat 285  Q
    |||||||||||||||||||| ||||||| ||||  ||||||| |||||| ||||||||||| ||| ||||||||||||||| ||| |||||||||||  |    
T  7964609 ggtaagggggttagaattcaatcataatcattt--agtgtaatttttcatttgttgtatgattaagtgcttaattgagtaagtgagtaattgttcatagt 7964706  T
Q  286 ggttagaatccgtgctcctattatgattttatgtttg 322  Q
     |||| |||||||||||  ||||||||  ||||||||    
T  7964707 tgttaaaatccgtgctctaattatgatgatatgtttg 7964743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 142 - 273
Target Start/End: Original strand, 34177501 - 34177629
Alignment:
Q  142 ctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgttg 241  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||| |  |||||||||| |||||| ||||||    
T  34177501 ctaggagctaaagtgaagctagagctagggaattgatctaactaaggtaa-ggggttagaattcatcataatca--tttagtgtaatttttcatttgttg 34177597  T
Q  242 tatgaataattgcttaattgagtaattgatta 273  Q
    ||||||||| ||||||||||| ||| ||||||    
T  34177598 tatgaataagtgcttaattgaataagtgatta 34177629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 115 - 282
Target Start/End: Original strand, 7185669 - 7185835
Alignment:
Q  115 cttgaagattcaagaagaggagagaa-cctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattcatcataat 213  Q
    ||||||||||||||||| || ||| | |||| |||||||||||||| ||| |||||||| |||  |||| |||||||||| |||||||||||||||||||    
T  7185669 cttgaagattcaagaagtggtgaggatcctatgagctaaagtgaagtttgggctaggaatttgtgctaattaaggtaaggaggttagaattcatcataat 7185768  T
Q  214 tatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcat 282  Q
     |  |||||||||| |||||| ||||||||||| ||| ||||||||||| ||| |||||||||||||||    
T  7185769 ca--tttagtgtaatttttcatttgttgtatgattaagtgcttaattgaataagtgattaattgttcat 7185835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 142 - 312
Target Start/End: Original strand, 18494181 - 18494349
Alignment:
Q  142 ctaggagctaaagtgaagcttgagctaggaa-attgatctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgtt 240  Q
    |||||||||||| ||| |||| ||||||| | ||| ||||||||||||||||||||||||||||||||||||| |||| | |    ||||||||||| |     
T  18494181 ctaggagctaaattgaggcttaagctagggagattaatctaactaaggtaagggggttagaattcatcataatcatttattg---caattttcaattatg 18494277  T
Q  241 gtatgaataattgcttaattgagtaattgattaattgttcatgatggttagaatccgtgctcctattatgat 312  Q
    |||||||||  |||||||||| ||||||||| |||||||||| || |||||||| |||||||| ||||||||    
T  18494278 gtatgaataggtgcttaattgtgtaattgatcaattgttcataattgttagaattcgtgctccaattatgat 18494349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 115 - 282
Target Start/End: Complemental strand, 18276856 - 18276690
Alignment:
Q  115 cttgaagattcaagaagagg-agagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattca-tcataa 212  Q
    ||||||||||||||||| || | ||| |||||||||||||||||||||||||||||||| |||  |||| |||||||| |||||||||||||| ||||||    
T  18276856 cttgaagattcaagaagtggtacagatcctaggagctaaagtgaagcttgagctaggaa-ttgtactaattaaggtaacggggttagaattcaatcataa 18276758  T
Q  213 ttatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcat 282  Q
    | ||||  ||||  | ||||||||| |||||||| ||| ||||||||||||||  |||||||||||||||    
T  18276757 tcattt--agtgcgatttttcaattattgtatgattaagtgcttaattgagtatgtgattaattgttcat 18276690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 142 - 322
Target Start/End: Original strand, 52265360 - 52265539
Alignment:
Q  142 ctaggagctaaagtgaagcttgagctaggaa-attgatctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgtt 240  Q
    |||||||||||| |||||| | ||||||| | ||| |||| |||||||||||||||||||||||||||||||| |||| |  || || ||||||||| ||    
T  52265360 ctaggagctaaattgaagcctaagctagggagattaatctgactaaggtaagggggttagaattcatcataatcatttat--tgcaatttttcaattatt 52265457  T
Q  241 gtatgaataattgcttaattgagtaattgattaattgttcat-gatggttagaatccgtgctcctattatgattttatgtttg 322  Q
    |||||||||| || ||||||| |||||||||||||||||||| |||| | | ||| |||||||  |||||||| |||||||||    
T  52265458 gtatgaataagtgtttaattgggtaattgattaattgttcatagatgatga-aattcgtgctctaattatgatgttatgtttg 52265539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 142 - 282
Target Start/End: Original strand, 15013136 - 15013274
Alignment:
Q  142 ctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattca-tcataattatttttagtgtaaattttcaattgtt 240  Q
    ||||||||||||||||||||||||||||||  |||  |||||||||||||||||||||||||||| ||||||| ||||  |||   |||||||| |||||    
T  15013136 ctaggagctaaagtgaagcttgagctaggat-ttgtgctaactaaggtaagggggttagaattcaatcataatcattt--agttgtaattttcatttgtt 15013232  T
Q  241 gtatgaataattgcttaattgagtaattgattaattgttcat 282  Q
    |||||  ||| ||||||||||| ||| |||||||||||||||    
T  15013233 gtatgtttaagtgcttaattgaataagtgattaattgttcat 15013274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 179 - 325
Target Start/End: Original strand, 30232386 - 30232531
Alignment:
Q  179 ctaactaaggtaagggggttagaattcatcataattatttttagtgtaaatttt-caattgttgtatgaataattgcttaattgagtaattgattaattg 277  Q
    |||||||||||||| |||||||||||||||||||| | || |  || || |||| ||||| | |||||||||| |||||||||| |||||||||||||||    
T  30232386 ctaactaaggtaagagggttagaattcatcataatcacttat--tgcaattttttcaattatggtatgaataagtgcttaattgtgtaattgattaattg 30232483  T
Q  278 ttcatgatggttagaatccgtgctcctattatgattttatgtttgtat 325  Q
    ||||| || |||||||| |||||||| ||||||||   ||||||||||    
T  30232484 ttcataattgttagaattcgtgctccaattatgatgacatgtttgtat 30232531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 93 - 261
Target Start/End: Original strand, 47534882 - 47535051
Alignment:
Q  93 aaaagggttatcgaaggaggaacttgaagattcaagaagagg-agagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaa 191  Q
    ||||||||||  |||| || | ||||||||||||||||  || ||||| ||||||||||||||||||||||| || ||||| | |   ||| ||||||||    
T  47534882 aaaagggttagagaagaagaagcttgaagattcaagaattggtagagatcctaggagctaaagtgaagcttgggcgaggaattggtgataattaaggtaa 47534981  T
Q  192 gggggttagaattc-atcataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattg 261  Q
    |||||||||||||| |||||||| | ||||||||||| ||||| ||| |||||||| ||| || |||||||    
T  47534982 gggggttagaattcaatcataatca-ttttagtgtaatttttccattattgtatgattaaatgattaattg 47535051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 180 - 282
Target Start/End: Original strand, 41256259 - 41256361
Alignment:
Q  180 taactaaggtaagggggttagaattca-tcataattatttttagt-gtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattg 277  Q
    ||||||||||||||||||||||||||| ||||||| ||||  ||| |||| |||||| ||||||||||  ||| ||||||||||| ||| ||||||||||    
T  41256259 taactaaggtaagggggttagaattcaatcataatcattt--agttgtaatttttcatttgttgtatgtttaagtgcttaattgaataagtgattaattg 41256356  T
Q  278 ttcat 282  Q
    |||||    
T  41256357 ttcat 41256361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 109 - 213
Target Start/End: Original strand, 23269753 - 23269858
Alignment:
Q  109 gaggaacttgaagattcaagaagaggagagaacctaggagctaaagtgaagcttgagctag-gaaattgatctaactaaggtaagggggttagaattcat 207  Q
    |||||||||||||| ||||| |  ||||   | |||||||| ||| |||||| | |||||| || ||| | |||||||||||||||||||||||||||||    
T  23269753 gaggaacttgaagaatcaaggattggagttgagctaggagcaaaattgaagcctaagctagagagattaacctaactaaggtaagggggttagaattcat 23269852  T
Q  208 cataat 213  Q
    ||||||    
T  23269853 cataat 23269858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 142 - 213
Target Start/End: Original strand, 20813399 - 20813471
Alignment:
Q  142 ctaggagctaaagtgaagcttgagctag-gaaattgatctaactaaggtaagggggttagaattcatcataat 213  Q
    |||||||| ||| |||||| | |||||| || ||| | |||||||||||||||||||||||||||||||||||    
T  20813399 ctaggagcgaaattgaagcctaagctagagagattaacctaactaaggtaagggggttagaattcatcataat 20813471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 218
Target Start/End: Original strand, 21959354 - 21959393
Alignment:
Q  179 ctaactaaggtaagggggttagaattcatcataattattt 218  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  21959354 ctaactaaggtaagggggttagaattcatcataatcattt 21959393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 283
Target Start/End: Original strand, 40885458 - 40885562
Alignment:
Q  183 ctaaggtaagggggttagaattcatcataatta----tttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgt 278  Q
    ||||||||||||||||||||||||||||||| |    | ||||| |||| |||  | || |||||||||||| || |||||||| ||||||  |||||||    
T  40885458 ctaaggtaagggggttagaattcatcataatcatgattatttagagtaattttctatttcttgtatgaataagtgattaattgaataattggataattgt 40885557  T
Q  279 tcatg 283  Q
    |||||    
T  40885558 tcatg 40885562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 282
Target Start/End: Complemental strand, 44056271 - 44056170
Alignment:
Q  179 ctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaatt-gttgtatgaataattgcttaatt-gagtaattgattaatt 276  Q
    ||||||||||||||||||||||||||||||||||| | || | ||   |||||||||||  ||||||||| || ||||||||| ||  ||||||||||||    
T  44056271 ctaactaaggtaagggggttagaattcatcataatcacttattgt---aattttcaattatttgtatgaa-aagtgcttaattggatgaattgattaatt 44056176  T
Q  277 gttcat 282  Q
    ||||||    
T  44056175 gttcat 44056170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 213
Target Start/End: Original strand, 819821 - 819855
Alignment:
Q  179 ctaactaaggtaagggggttagaattcatcataat 213  Q
    |||||||||||||||||||||||||||||||||||    
T  819821 ctaactaaggtaagggggttagaattcatcataat 819855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 182 - 215
Target Start/End: Complemental strand, 30458257 - 30458224
Alignment:
Q  182 actaaggtaagggggttagaattcatcataatta 215  Q
    ||||||||||||||||||||||||||||||||||    
T  30458257 actaaggtaagggggttagaattcatcataatta 30458224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 282
Target Start/End: Complemental strand, 16732527 - 16732425
Alignment:
Q  177 atctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagt-aattgattaat 275  Q
    ||||||||||||||| | ||||||||||||||||||| |   ||| || || |||| ||||  |||||||| || |||||||||| || |||||||||||    
T  16732527 atctaactaaggtaaagaggttagaattcatcataatca---ttattgcaattttttaattagtgtatgaa-aagtgcttaattgggtgaattgattaat 16732432  T
Q  276 tgttcat 282  Q
    |||||||    
T  16732431 tgttcat 16732425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 282
Target Start/End: Original strand, 53704627 - 53704725
Alignment:
Q  182 actaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaatt-gttgtatgaataattgcttaatt-gagtaattgattaattgtt 279  Q
    |||||||||||||||||||||||||||||||| | |||   ||| | |||||||||  ||||||| |||| ||||||||| ||  |||||||||||||||    
T  53704627 actaaggtaagggggttagaattcatcataatcacttt---tgttatttttcaattatttgtatg-ataagtgcttaattggatgaattgattaattgtt 53704722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 213
Target Start/End: Original strand, 12837094 - 12837125
Alignment:
Q  182 actaaggtaagggggttagaattcatcataat 213  Q
    ||||||||||||||||||||||||||||||||    
T  12837094 actaaggtaagggggttagaattcatcataat 12837125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 93 - 160
Target Start/End: Original strand, 15674918 - 15674985
Alignment:
Q  93 aaaagggttatcgaaggaggaacttgaagattcaagaagaggagagaacctaggagctaaagtgaagc 160  Q
    ||||||||||  ||||||| |||||||||| |||||||  |||| || | ||||||||||||||||||    
T  15674918 aaaagggttagagaaggagaaacttgaagaatcaagaattggagtgagcttaggagctaaagtgaagc 15674985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 179 - 210
Target Start/End: Complemental strand, 34395614 - 34395583
Alignment:
Q  179 ctaactaaggtaagggggttagaattcatcat 210  Q
    ||||||||||||||||||||||||||||||||    
T  34395614 ctaactaaggtaagggggttagaattcatcat 34395583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 213
Target Start/End: Original strand, 53907602 - 53907633
Alignment:
Q  182 actaaggtaagggggttagaattcatcataat 213  Q
    ||||||||||||||||||||||||||||||||    
T  53907602 actaaggtaagggggttagaattcatcataat 53907633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 146; Significance: 7e-77; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 110 - 319
Target Start/End: Original strand, 21410870 - 21411078
Alignment:
Q  110 aggaacttgaagattcaagaagaggagagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattcatca 209  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  21410870 aggaacttgaagattcaagaagaggagagaatctaggagctaaagtgaagcttgagctagggaattaatctaactaaggtaagggggttagaattcatca 21410969  T
Q  210 taattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcatgatggttagaatccgtgctcctattat 309  Q
    |||| | ||||||||||||||||||||| |||||||||||| |||||||||||| |||||| ||||||||||| || ||||||||  ||||||| |||||    
T  21410970 taatca-ttttagtgtaaattttcaattattgtatgaataagtgcttaattgaggaattgactaattgttcataatcgttagaatttgtgctccaattat 21411068  T
Q  310 gattttatgt 319  Q
    ||| ||||||    
T  21411069 gatgttatgt 21411078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 109 - 322
Target Start/End: Original strand, 25367055 - 25367267
Alignment:
Q  109 gaggaacttgaagattcaagaagaggagagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattcatc 208  Q
    ||||||||||||||||||||||||||| ||||||||  |||||||||||| |||  |||||  |||||||||| ||||||||||||||||||||||||||    
T  25367055 gaggaacttgaagattcaagaagaggaaagaacctataagctaaagtgaatctttggctagagaattgatctagctaaggtaagggggttagaattcatc 25367154  T
Q  209 ataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcatgatggttagaatccgtgctcctatta 308  Q
    ||||| ||||| ||||||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||| || |||||||| |||||||| ||||    
T  25367155 ataatcatttt-agtgtaaattttcaattattgtatgaataagtgcttaattgagcaattgattaattgttcataattgttagaattcgtgctccaatta 25367253  T
Q  309 tgattttatgtttg 322  Q
    |||| |||||||||    
T  25367254 tgatgttatgtttg 25367267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 83 - 282
Target Start/End: Original strand, 16887583 - 16887783
Alignment:
Q  83 agcagagaggaaaagggttatcga-aggaggaacttgaagattcaagaagaggagagaacctaggagctaaagtgaagcttgagctaggaaattgatcta 181  Q
    |||| |||||||||||||||  || | |||||||||||||| |||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||    
T  16887583 agcaaagaggaaaagggttagagagaagaggaacttgaagaatcaagaagaggagagaacataggagctaaagtgaagcttgaactagggaattgatcta 16887682  T
Q  182 actaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttca 281  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||| |||||||||||| || |||||||| ||| ||||||||||||||    
T  16887683 actaaggtaagggggttagaattcatcataatcatttttagtataatttttcaattattgtatgaataagtgattaattgaataaatgattaattgttca 16887782  T
Q  282 t 282  Q
    |    
T  16887783 t 16887783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 142 - 324
Target Start/End: Complemental strand, 25920009 - 25919827
Alignment:
Q  142 ctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgttg 241  Q
    |||||||||||||||||| | || ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||    
T  25920009 ctaggagctaaagtgaagttagaactagggaattgatctaactaaggtaagggggttagaattcatcataatcatttttagtgtcaattttcatttgttg 25919910  T
Q  242 tatgaataattgcttaattgagtaattgattaattgttcatgatggttagaatccgtgctcctattatgattttatgtttgta 324  Q
     |||||||| |||||||||||||||||||||||||| |||||||  ||||||| ||||||||||||||||| |||| ||||||    
T  25919909 aatgaataagtgcttaattgagtaattgattaattggtcatgattattagaattcgtgctcctattatgatgttatatttgta 25919827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 115 - 322
Target Start/End: Complemental strand, 21623591 - 21623384
Alignment:
Q  115 cttgaagattcaagaagaggagagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattca-tcataat 213  Q
    ||||||||||||||||  | ||||| ||||||||||||||||||||||| |||||||| | |   ||| ||||||||||||||||||||||| |||||||    
T  21623591 cttgaagattcaagaattgaagagatcctaggagctaaagtgaagcttgggctaggaattggtgataattaaggtaagggggttagaattcaatcataat 21623492  T
Q  214 tatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcatgatggttagaatccgtgctcctattatgatt 313  Q
     ||||| ||||||| || ||||||||||||||||||| ||||||||||||||||||||||||||||||| |  |||||||| |||||||| ||||||||     
T  21623491 catttt-agtgtaatttctcaattgttgtatgaataagtgcttaattgagtaattgattaattgttcataaatgttagaattcgtgctccaattatgatg 21623393  T
Q  314 ttatgtttg 322  Q
     ||||||||    
T  21623392 gtatgtttg 21623384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 115 - 325
Target Start/End: Complemental strand, 15740643 - 15740442
Alignment:
Q  115 cttgaagattcaagaagaggagagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattcatcataatt 214  Q
    |||||||||||||||   |||||| || ||||||| ||||||||||||||  |||| ||||||||| |         ||| ||||||||||||||||||     
T  15740643 cttgaagattcaagagttggagaggacttaggagcgaaagtgaagcttgaattagggaattgatctta---------gggagttagaattcatcataatc 15740553  T
Q  215 atttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcatgatggttagaatccgtgctcctattatgattt 314  Q
    ||||||||||||||||||||||| |||||||||||| | |||||||||||||||||||||||||||||||| |||||| | |||||||| ||||||||      
T  15740552 atttttagtgtaaattttcaatttttgtatgaataagtacttaattgagtaattgattaattgttcatgattgttagatttcgtgctccaattatgatgc 15740453  T
Q  315 tatgtttgtat 325  Q
    |||||||||||    
T  15740452 tatgtttgtat 15740442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 177 - 322
Target Start/End: Complemental strand, 18399297 - 18399154
Alignment:
Q  177 atctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaatt 276  Q
    ||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||| ||||| |||||||||||| ||||||||||||||||||| |||||    
T  18399297 atctaactaaggtaagggggttagaattcttcataatcatttt-agtgtaaattt-caattattgtatgaataagtgcttaattgagtaattgactaatt 18399200  T
Q  277 gttcatgatggttagaatccgtgctcctattatgattttatgtttg 322  Q
    |||||| || |||||||| |||||||| |||||||| |||||||||    
T  18399199 gttcataattgttagaattcgtgctccaattatgatgttatgtttg 18399154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 81 - 282
Target Start/End: Original strand, 35135802 - 35136004
Alignment:
Q  81 ggagcagagaggaaaagggttatcgaag-gaggaacttgaagattcaagaagaggagaga-acctaggagctaaagtgaagcttgagctaggaaattgat 178  Q
    |||||| ||| |||||||||||  || | |||||||||||||||||||| |  ||| ||| | ||||||||||||||||||||||||||||| |||| ||    
T  35135802 ggagcaaagaagaaaagggttagagaggagaggaacttgaagattcaaggattgga-agagagctaggagctaaagtgaagcttgagctagggaattaat 35135900  T
Q  179 ctaactaaggtaagggggttagaattcatcataattatttttagtgtaa-attttcaattgttgtatgaataattgcttaattgagtaattgattaattg 277  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||  ||||||||| |||||||||||| || ||||||   ||||||||||||||    
T  35135901 ctaactaaggtaagggggttagaattcatcataatca-ttttagtgtaattttttcaattattgtatgaataagtgattaattagataattgattaattg 35135999  T
Q  278 ttcat 282  Q
    |||||    
T  35136000 ttcat 35136004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 119 - 282
Target Start/End: Original strand, 33538198 - 33538361
Alignment:
Q  119 aagattcaagaagagg-agagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattc-atcataattat 216  Q
    ||||||||||||| || ||||| ||||||||||||||||||||||| |||||||| |||  | ||||||||||||||||||||||||| |||||||| |     
T  33538198 aagattcaagaagtggtagagatcctaggagctaaagtgaagcttgggctaggaatttgtgcgaactaaggtaagggggttagaattcaatcataatca- 33538296  T
Q  217 ttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcat 282  Q
     |||||||||| |||||| ||||||||||| ||| ||||||||||||||| |||||||||||||||    
T  33538297 -tttagtgtaatttttcatttgttgtatgattaagtgcttaattgagtaagtgattaattgttcat 33538361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 142 - 282
Target Start/End: Complemental strand, 33325088 - 33324948
Alignment:
Q  142 ctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattcatcataattatttttagtgtaaat-tttcaattgtt 240  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| | ||||||||||| | ||||||||  |    
T  33325088 ctaggagctaaagtgaagcttgagctagggaattcatctaactaaggtaagggggttagaattcatcataatca-ttttagtgtaattatttcaattaat 33324990  T
Q  241 gtatgaataattgcttaattgagtaattgattaattgttcat 282  Q
    |||||||||| || |||||||  |||||||||||||||||||    
T  33324989 gtatgaataagtgattaattggataattgattaattgttcat 33324948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 116 - 322
Target Start/End: Original strand, 18629433 - 18629639
Alignment:
Q  116 ttgaagattcaagaagagg-agagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattc-atcataat 213  Q
    |||||||||||||||| || | ||| |||||||| |||||||||||||| |||||||| |||  ||||||||||||||||||||||||||| ||||||||    
T  18629433 ttgaagattcaagaagtggtatagatcctaggaggtaaagtgaagcttgggctaggaatttgtgctaactaaggtaagggggttagaattcaatcataat 18629532  T
Q  214 tatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcatgatggttagaatccgtgctcctattatgatt 313  Q
     |  |||||||||| |||| | ||||||||||| ||| || |||||||| ||| |||||||||||||||  | |||| ||| |||||||  ||||||||     
T  18629533 ca--tttagtgtaattttttatttgttgtatgattaagtgtttaattgaataagtgattaattgttcatagttgttaaaattcgtgctctaattatgatg 18629630  T
Q  314 ttatgtttg 322  Q
     ||||||||    
T  18629631 atatgtttg 18629639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 92 - 282
Target Start/End: Original strand, 17083000 - 17083189
Alignment:
Q  92 gaaaagggttatcgaaggaggaacttgaagattcaagaagagg-agagaacctaggagctaaagtgaagcttgagctagga--aattgatctaactaagg 188  Q
    ||||||||||| ||||| || | |||||||||| |||||  || ||||| ||||||||||||||||||||||  |||||||  |||||  ||||||||||    
T  17083000 gaaaagggttagcgaagaagaagcttgaagatttaagaattggtagagatcctaggagctaaagtgaagcttcggctaggattaattg--ctaactaagg 17083097  T
Q  189 taagggggttagaattcatcataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcat 282  Q
    |||||||||||||||||||  |||| ||||  ||||||| |||||| ||||||||||| ||| ||||||||||| ||| |||||||||||||||    
T  17083098 taagggggttagaattcattttaatcattt--agtgtaatttttcatttgttgtatgattaagtgcttaattgaataagtgattaattgttcat 17083189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 93 - 282
Target Start/End: Original strand, 22361568 - 22361756
Alignment:
Q  93 aaaagggttatcgaaggaggaacttgaagattcaagaagagg-agagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaa 191  Q
    ||||||||||  |||| || | |||| |||||||||||  || ||||| |||||||||||||||||||||||  ||||||| | |   ||| ||||||||    
T  22361568 aaaagggttagagaagaagaagcttggagattcaagaattgggagagatcctaggagctaaagtgaagcttggcctaggaattggtgataattaaggtaa 22361667  T
Q  192 gggggttagaattca-tcataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcat 282  Q
    ||||||||||||||| ||||||| |||||    |||| |||||||||||||||||||||| |||||||||||| || |||||||||||||||    
T  22361668 gggggttagaattcaatcataatcatttta---gtaatttttcaattgttgtatgaataagtgcttaattgagcaaatgattaattgttcat 22361756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 115 - 281
Target Start/End: Complemental strand, 25654546 - 25654381
Alignment:
Q  115 cttgaagattcaagaagagg-agagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattcatcataat 213  Q
    ||||||||||||||||| || ||||| |||||||||||||||||| |||| ||||||||  ||  |||| |||||||||||||||||||||  |  ||||    
T  25654546 cttgaagattcaagaagtggtagagatcctaggagctaaagtgaaacttgcgctaggaatctgtgctaattaaggtaagggggttagaatttgtgctaat 25654447  T
Q  214 tatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttca 281  Q
     |  |||||||||| ||||||||| |||||||| ||| ||||||||||||||  ||||||||||||||    
T  25654446 ca--tttagtgtaatttttcaattattgtatgattaagtgcttaattgagtaggtgattaattgttca 25654381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 142 - 282
Target Start/End: Original strand, 15079563 - 15079702
Alignment:
Q  142 ctaggagctaaagtgaagcttgagctag-gaaattgatctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgtt 240  Q
    |||||||| |||||||||||| |||||| |  ||| ||||||||||||||||||| ||||||||||||||||| ||||| ||||||| ||||||||| ||    
T  15079563 ctaggagcaaaagtgaagcttaagctagagggattaatctaactaaggtaagggg-ttagaattcatcataatcatttt-agtgtaatttttcaattatt 15079660  T
Q  241 gtatgaataattgcttaattgagtaattgattaattgttcat 282  Q
     |||||||||  | |||||||  ||||||||||||| |||||    
T  15079661 ttatgaataagggattaattggataattgattaattattcat 15079702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 115 - 213
Target Start/End: Complemental strand, 14152733 - 14152634
Alignment:
Q  115 cttgaagattcaagaagaggaga-gaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattcatcataat 213  Q
    |||||||| |||||||||||||| || ||||||||||||||||||||||| |||||||| |||  |||| ||||| ||||||||||   |||||||||||    
T  14152733 cttgaagaatcaagaagaggagatgatcctaggagctaaagtgaagcttgggctaggaatttgtgctaattaaggcaagggggttattcttcatcataat 14152634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 137 - 282
Target Start/End: Original strand, 17556867 - 17557010
Alignment:
Q  137 agaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattc-atcataattatttttagtgtaaattttcaa 235  Q
    |||| ||||||| |||||||||||||  |||||||  |||| |||| |||||||||||||||||||||| |||||||| |  | |||||||| ||||||     
T  17556867 agaatctaggagataaagtgaagcttaggctaggat-ttgagctaattaaggtaagggggttagaattcaatcataatca--tctagtgtaatttttcat 17556963  T
Q  236 ttgttgtatgaataattgcttaattgagtaattgattaattgttcat 282  Q
    |  ||| || | ||| ||||||||||| |||||||||| ||||||||    
T  17556964 taattgcattattaagtgcttaattgaataattgattatttgttcat 17557010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 282
Target Start/End: Complemental strand, 18432999 - 18432899
Alignment:
Q  179 ctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagt-aattgattaattg 277  Q
    ||||||||||||||||||||||||||||||||||| |   ||| || |||||||||||| ||||||||| ||  ||||||||| || ||||||||| |||    
T  18432999 ctaactaaggtaagggggttagaattcatcataatca---ttattgcaaattttcaattattgtatgaa-aagagcttaattgggtgaattgattatttg 18432904  T
Q  278 ttcat 282  Q
    |||||    
T  18432903 ttcat 18432899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 282
Target Start/End: Complemental strand, 22441287 - 22441190
Alignment:
Q  182 actaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaatt-gttgtatgaataattgcttaattgagt-aattgattaattgtt 279  Q
    |||||||||||||||||||||||||||||||| | ||||      |||||||||||  ||||||| |||| ||||||||||||| |||||||||||||||    
T  22441287 actaaggtaagggggttagaattcatcataatcactttt----gcaattttcaattatttgtatg-ataagtgcttaattgagtgaattgattaattgtt 22441193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 143 - 218
Target Start/End: Complemental strand, 16086411 - 16086335
Alignment:
Q  143 taggagctaaagtgaagcttgagctag-gaaattgatctaactaaggtaagggggttagaattcatcataattattt 218  Q
    ||||||| ||| |||||| | |||||| || ||| | ||||||||||||||||||||||||||||||||||| ||||    
T  16086411 taggagcaaaattgaagcctaagctagagagattaacctaactaaggtaagggggttagaattcatcataatcattt 16086335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 142 - 213
Target Start/End: Complemental strand, 18777524 - 18777452
Alignment:
Q  142 ctaggagctaaagtgaagcttgagctag-gaaattgatctaactaaggtaagggggttagaattcatcataat 213  Q
    |||||||| ||| |||||| | |||||| || ||| | |||||||||||||||||||||||||||||||||||    
T  18777524 ctaggagcaaaattgaagcctaagctagagagattaacctaactaaggtaagggggttagaattcatcataat 18777452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 282
Target Start/End: Complemental strand, 32899147 - 32899046
Alignment:
Q  179 ctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgtt-gtatgaataattgcttaattgagt-aattgattaatt 276  Q
    ||||||||||||||||||||||||||||||||||| | || | ||   ||||||||||| || ||||||| || |||||||||  || ||||||||||||    
T  32899147 ctaactaaggtaagggggttagaattcatcataatcacttattgt---aattttcaattattggtatgaa-aagtgcttaatttggtgaattgattaatt 32899052  T
Q  277 gttcat 282  Q
    ||||||    
T  32899051 gttcat 32899046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 213
Target Start/End: Complemental strand, 16106873 - 16106839
Alignment:
Q  179 ctaactaaggtaagggggttagaattcatcataat 213  Q
    |||||||||||||||||||||||||||||||||||    
T  16106873 ctaactaaggtaagggggttagaattcatcataat 16106839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 282
Target Start/End: Complemental strand, 18570632 - 18570535
Alignment:
Q  182 actaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaatt-gttgtatgaataattgcttaatt-gagtaattgattaattgtt 279  Q
    |||||||||||||||||||||||||||||||| | |||| ||   |||||||||||  ||||||| |||| ||||||||| ||  |||||||||||||||    
T  18570632 actaaggtaagggggttagaattcatcataatcaatttt-gt---aattttcaattatttgtatg-ataagtgcttaattggatgaattgattaattgtt 18570538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 213
Target Start/End: Original strand, 25640453 - 25640485
Alignment:
Q  181 aactaaggtaagggggttagaattcatcataat 213  Q
    |||||||||||||||||||||||||||||||||    
T  25640453 aactaaggtaagggggttagaattcatcataat 25640485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 160
Target Start/End: Original strand, 35009248 - 35009328
Alignment:
Q  81 ggagcagagaggaa-aagggttatcgaaggaggaacttgaagattcaagaagaggagagaacctaggagctaaagtgaagc 160  Q
    |||| ||||||||| ||||||||  ||||||| |||||||||| |||||||  || | ||| ||| |||||||||||||||    
T  35009248 ggagaagagaggaacaagggttagagaaggagaaacttgaagaatcaagaattggggtgaatctaagagctaaagtgaagc 35009328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 140; Significance: 3e-73; HSPs: 3)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 109 - 322
Target Start/End: Original strand, 102743 - 102953
Alignment:
Q  109 gaggaacttgaagattcaagaagaggagagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattcatc 208  Q
    ||||| |||||||||||||||||||   ||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||| ||| ||||||||    
T  102743 gaggagcttgaagattcaagaagag---agaacctagaagctaaagtgaagcttgagctaggggattgatctaactaaggtaaggggtttataattcatc 102839  T
Q  209 ataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcatgatggttagaatccgtgctcctatta 308  Q
    ||||| |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || |||||||| |||||||| ||||    
T  102840 ataatcattttttgtgtaaattttcaattgttgtatgaataagtgcttaattgagtaattgattaattgttcataattgttagaattcgtgctccaatta 102939  T
Q  309 tgattttatgtttg 322  Q
    ||||  ||||||||    
T  102940 tgatgatatgtttg 102953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 115 - 271
Target Start/End: Complemental strand, 110005 - 109849
Alignment:
Q  115 cttgaagattcaagaagaggagagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattcatcataatt 214  Q
    ||||||||||||||  |||   ||||| |||||||||||||||||| | ||||||| |||| ||||||||||||||||| |||||||||||||||||||     
T  110005 cttgaagattcaagtggagagaagaacttaggagctaaagtgaagcctaagctagggaattaatctaactaaggtaaggtggttagaattcatcataatc 109906  T
Q  215 atttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgat 271  Q
    || ||| ||||||||| ||||||||||||||||||| ||||||||||| ||||||||    
T  109905 atcttttgtgtaaattatcaattgttgtatgaataaatgcttaattgattaattgat 109849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 109 - 282
Target Start/End: Original strand, 112366 - 112536
Alignment:
Q  109 gaggaacttgaagattcaagaagaggagagaacctaggagctaaagtgaagcttgagctaggaa-attgatctaactaaggtaagggggttagaattcat 207  Q
    |||||||||||||| |||||  | | ||||| | ||||||| ||| |||||| | ||||||| | ||| |||||||||||||||||||||||||||||||    
T  112366 gaggaacttgaagaatcaaggggtgaagagagc-taggagcaaaattgaagcctaagctagggagattaatctaactaaggtaagggggttagaattcat 112464  T
Q  208 cataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagt-aattgattaattgttcat 282  Q
    |||||| |   ||| || || ||||||||| ||||||||| || | |||| ||| || ||||||||||||||||||    
T  112465 cataatca---ttattgcaatttttcaattattgtatgaa-aagtacttatttgggtgaattgattaattgttcat 112536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 132; Significance: 2e-68; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 81 - 278
Target Start/End: Complemental strand, 28995 - 28796
Alignment:
Q  81 ggagcagagaggaa-aagggttatcga-aggaggaacttgaagattcaagaagaggagagaacctaggagctaaagtgaagcttgagctaggaaattgat 178  Q
    |||||||||||||| ||||||||  || | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| | |||||    
T  28995 ggagcagagaggaacaagggttagagagaagaggaacttgaagattcaagaagaggagagaacctaggaactaaagtgaagcttgggctagggatttgat 28896  T
Q  179 ctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgt 278  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| | ||||||||||||| |||||||||||    
T  28895 ctaactaaggtaacggggttagaattcatcataatcatttttagtttaaattttcaattgttgtatgaataagttcttaattgagtaaatgattaattgt 28796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 126; Significance: 6e-65; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 81 - 312
Target Start/End: Original strand, 33518 - 33749
Alignment:
Q  81 ggagcagagaggaaaagggttatcga-aggaggaacttgaagattcaagaagaggagaga-acctaggagctaaagtgaagcttgagctaggaaattgat 178  Q
    |||||| |||||||||||||||  || | |||||||||||||||||||| |  ||| ||| | ||| |||||||| |||||||||||||||| |||| ||    
T  33518 ggagcaaagaggaaaagggttagagagaagaggaacttgaagattcaaggattgga-agagagctatgagctaaattgaagcttgagctagggaattaat 33616  T
Q  179 ctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgt 278  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  33617 ctaactaaggtaagggggttagaattcatcataatcatttttagtgtaaa-tttcaattgttgtatgaataaatgcttaattgagtaattgattaattgt 33715  T
Q  279 tcatgatggttagaatccgtgctcctattatgat 312  Q
    |||| || |||||||| | |||||| ||||||||    
T  33716 tcataattgttagaattcatgctccaattatgat 33749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 126; Significance: 6e-65; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 81 - 312
Target Start/End: Original strand, 39446556 - 39446787
Alignment:
Q  81 ggagcagagaggaaaagggttatcga-aggaggaacttgaagattcaagaagaggagaga-acctaggagctaaagtgaagcttgagctaggaaattgat 178  Q
    |||||| |||||||||||||||  || | |||||||||||||||||||| |  ||| ||| | ||| |||||||| |||||||||||||||| |||| ||    
T  39446556 ggagcaaagaggaaaagggttagagagaagaggaacttgaagattcaaggattgga-agagagctatgagctaaattgaagcttgagctagggaattaat 39446654  T
Q  179 ctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgt 278  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  39446655 ctaactaaggtaagggggttagaattcatcataatcatttttagtgtaaa-tttcaattgttgtatgaataaatgcttaattgagtaattgattaattgt 39446753  T
Q  279 tcatgatggttagaatccgtgctcctattatgat 312  Q
    |||| || |||||||| | |||||| ||||||||    
T  39446754 tcataattgttagaattcatgctccaattatgat 39446787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 133 - 279
Target Start/End: Original strand, 22735690 - 22735836
Alignment:
Q  133 ggagagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattcatcataattatttttagtgtaaatttt 232  Q
    |||||| ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||    
T  22735690 ggagaggacctaggagctaaagtgaagcttgagctagggaatttatctaactaaggtaagggggttaaaattcatcataatcatttttaatgtaaatttt 22735789  T
Q  233 caattgttgtatgaataattgcttaattgagtaattgattaattgtt 279  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||    
T  22735790 caattgttgtatgaataagtgcttaattgagtaattgattaattgtt 22735836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 143 - 325
Target Start/End: Original strand, 31194176 - 31194358
Alignment:
Q  143 taggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgttgt 242  Q
    ||||||| |||||||||||| ||||||  |||| ||||||||||||||||||||||||  ||||||||||| |||||||||| |||||||||||||||||    
T  31194176 taggagcaaaagtgaagcttaagctagtgaattaatctaactaaggtaagggggttagttttcatcataatcatttttagtgcaaattttcaattgttgt 31194275  T
Q  243 atgaataattgcttaattgagtaattgattaattgttcatgatggttagaatccgtgctcctattatgattttatgtttgtat 325  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||  |||| ||| || |||||||||    
T  31194276 atgaataattgcttaattgagtaattgattaattgttcatgattgttagaattcgtgctctaattacgatgttctgtttgtat 31194358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 115 - 282
Target Start/End: Complemental strand, 25296582 - 25296414
Alignment:
Q  115 cttgaagattcaagaagaggagagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattc-atcataat 213  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  25296582 cttgaagattcaagaagaagagagaacctaagagctaaagtgaagcttgggctagggaattgatctaactaaggtaagggggttagaattcaatcataat 25296483  T
Q  214 tatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcat 282  Q
     ||||||||||||||||||  |||||||||||||||| || |||||||||||| | |||||||||||||    
T  25296482 catttttagtgtaaatttttgattgttgtatgaataagtgtttaattgagtaagtaattaattgttcat 25296414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 115 - 282
Target Start/End: Complemental strand, 25758602 - 25758434
Alignment:
Q  115 cttgaagattcaagaagaggagagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattc-atcataat 213  Q
    ||||||||||||| |||| |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  25758602 cttgaagattcaaaaagaagagagaacctaggagctaaagtgaagcttgggctagggaattgatctaactaaggtaagggggttagaattcaatcataat 25758503  T
Q  214 tatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcat 282  Q
     ||||||||||||||||||  |||||||||||||||| || |||||||||||| | |||||||||||||    
T  25758502 catttttagtgtaaatttttgattgttgtatgaataagtgtttaattgagtaagtaattaattgttcat 25758434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 115 - 321
Target Start/End: Complemental strand, 17285628 - 17285421
Alignment:
Q  115 cttgaagattcaagaagaggagagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattca-tcataat 213  Q
    ||||||||||||||||  ||||||| ||||||||||||||||||||||| | |||||| | |   ||| ||||||||||||||||||||||| |||||||    
T  17285628 cttgaagattcaagaattggagagatcctaggagctaaagtgaagcttgggttaggaattggtgataattaaggtaagggggttagaattcaatcataat 17285529  T
Q  214 tatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcatgatggttagaatccgtgctcctattatgatt 313  Q
     |||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||| ||||||||||| || |||||||| |||||||| ||||||||     
T  17285528 catttttagtgtaaattttcaattgttgtatgattaagtgcttaattgaataattgaataattgttcataattgttagaattcgtgctccaattatgatg 17285429  T
Q  314 ttatgttt 321  Q
     |||||||    
T  17285428 atatgttt 17285421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 109 - 282
Target Start/End: Original strand, 21197971 - 21198143
Alignment:
Q  109 gaggaacttgaagattcaagaagaggagagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattcatc 208  Q
    ||||| |||||||||||||||   ||||||||||||||||||||||||||||||| |||||||| | |   ||| |||| |||||||||||||||||||     
T  21197971 gaggagcttgaagattcaagagttggagagaacctaggagctaaagtgaagcttgggctaggaattggtgataattaagataagggggttagaattcatt 21198070  T
Q  209 ataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcat 282  Q
    ||||| ||||| ||||||| ||||||||| |||||||| ||| |||||||||||||||||||||||||||||||    
T  21198071 ataatcatttt-agtgtaatttttcaattattgtatgattaagtgcttaattgagtaattgattaattgttcat 21198143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 161 - 324
Target Start/End: Complemental strand, 15970196 - 15970035
Alignment:
Q  161 ttgagctaggaaattgatctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgttgtatgaataattgcttaatt 260  Q
    ||||| |||| ||||||| ||||||||||||||||||| |||||||||||||| ||||  |||| || ||||||||| |||||||||||| |||||||||    
T  15970196 ttgagatagggaattgatataactaaggtaagggggttggaattcatcataatcattt--agtgcaatttttcaattattgtatgaataaatgcttaatt 15970099  T
Q  261 gagtaattgattaattgttcatgatggttagaatccgtgctcctattatgattttatgtttgta 324  Q
    |||||| ||||||||||||||| || |||| ||| |||||||| |||||||| |||||||||||    
T  15970098 gagtaaatgattaattgttcataattgttaaaattcgtgctccaattatgatgttatgtttgta 15970035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 115 - 280
Target Start/End: Complemental strand, 33528848 - 33528683
Alignment:
Q  115 cttgaagattcaagaag-aggagagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattc-atcataa 212  Q
    ||||||||||||||||| || ||||| ||||||||||||||||||| |||||||||||| |||  ||||||||||||||||||||||||||| |||||||    
T  33528848 cttgaagattcaagaagtagtagagatcctaggagctaaagtgaagtttgagctaggaatttgtgctaactaaggtaagggggttagaattcaatcataa 33528749  T
Q  213 ttatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttc 280  Q
    | |  |||||||||| |||||| ||||||||||| ||| ||||||||||| ||| |||||||||||||    
T  33528748 tca--tttagtgtaatttttcatttgttgtatgattaagtgcttaattgaataagtgattaattgttc 33528683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 115 - 322
Target Start/End: Complemental strand, 5855036 - 5854830
Alignment:
Q  115 cttgaagattcaagaagagg-agagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattca-tcataa 212  Q
    ||||||||||||||||| || ||||| ||||||||||||||||||||||| |||||||| |||  |||| |||||||||| |||||||||||| ||||||    
T  5855036 cttgaagattcaagaagtggtagagatcctaggagctaaagtgaagcttgggctaggaa-ttgtgctaattaaggtaaggaggttagaattcaatcataa 5854938  T
Q  213 ttatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcatgatggttagaatccgtgctcctattatgat 312  Q
    | ||||  ||||||| ||||||||| |||||||| ||| ||||||||||||||| |||||||||||||||  | |||| ||| |||||||  ||||||||    
T  5854937 tcattt--agtgtaatttttcaattattgtatgattaagtgcttaattgagtaagtgattaattgttcatagttgttaaaattcgtgctctaattatgat 5854840  T
Q  313 tttatgtttg 322  Q
      ||||||||    
T  5854839 gatatgtttg 5854830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 115 - 282
Target Start/End: Complemental strand, 15933721 - 15933554
Alignment:
Q  115 cttgaagattcaagaagagg-agagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaatt-catcataa 212  Q
    ||||||||||||||||| || ||||| |||||||||||||||||||| || ||||||||||||  |||| |||||||||||||||||||||  |||||||    
T  15933721 cttgaagattcaagaagtggtagagatcctaggagctaaagtgaagcctgggctaggaaattgtgctaattaaggtaagggggttagaattaaatcataa 15933622  T
Q  213 ttatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcat 282  Q
    | |  |||||||||| ||||||||| |||||||| ||| ||||||||||||||| |||||||||||||||    
T  15933621 tca--tttagtgtaatttttcaattattgtatgattaagtgcttaattgagtaagtgattaattgttcat 15933554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 142 - 322
Target Start/End: Complemental strand, 38534045 - 38533865
Alignment:
Q  142 ctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgttg 241  Q
    |||||||||||||||||||| |||||||||||||||| | |||||||||||||||||||||||||||||||| |||| |    |    | | |||| |||    
T  38534045 ctaggagctaaagtgaagctagagctaggaaattgatttgactaaggtaagggggttagaattcatcataatcatttatgaattgttgtatgaattattg 38533946  T
Q  242 tatgaataattgcttaattgagtaattgattaattgttcatgatggttagaatccgtgctcctattatgattttatgtttg 322  Q
    ||||||||| ||||||||| ||||||||| ||||||||||| || |||||||| ||| |||| |||||||| |||||||||    
T  38533945 tatgaataagtgcttaattaagtaattgactaattgttcataattgttagaattcgtactccaattatgatgttatgtttg 38533865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 142 - 281
Target Start/End: Complemental strand, 22981664 - 22981528
Alignment:
Q  142 ctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgttg 241  Q
    |||||||||||| ||||||||||||| || |||| ||||||||||||||||||||||||||||||||||||| |  | || || || ||||||||| |||    
T  22981664 ctaggagctaaattgaagcttgagctggggaattaatctaactaaggtaagggggttagaattcatcataatca--tatattgcaatttttcaatt-ttg 22981568  T
Q  242 tatgaataattgcttaattgagtaattgattaattgttca 281  Q
    ||||||||| |||||||||| |||||||||||||||||||    
T  22981567 tatgaataagtgcttaattgggtaattgattaattgttca 22981528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 115 - 322
Target Start/End: Complemental strand, 23150201 - 23149995
Alignment:
Q  115 cttgaagattcaagaagaggagagaa-cctaggagctaaagtgaagctt-gagctagga--aattgatctaactaaggtaaggggg-ttagaattcatca 209  Q
    |||||||||||||||||||| ||| | |||||||||||||||||||||| | |||||||  |||||  |||||||||||||||||| ||| |||||||||    
T  23150201 cttgaagattcaagaagaggtgaggatcctaggagctaaagtgaagctttgggctaggattaattg--ctaactaaggtaaggggggttataattcatca 23150104  T
Q  210 taattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcatgatggttagaatccgtgctcctattat 309  Q
    |||| ||||  ||| ||| |||||| ||||||||||| ||| ||||||||||||||| ||||||||||||||| || |||| ||| |||||||| |||||    
T  23150103 taatcattt--agtttaa-ttttca-ttgttgtatgagtaagtgcttaattgagtaaatgattaattgttcataattgttaaaattcgtgctccaattat 23150008  T
Q  310 gattttatgtttg 322  Q
    |||  ||||||||    
T  23150007 gatgatatgtttg 23149995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 115 - 312
Target Start/End: Original strand, 23151660 - 23151854
Alignment:
Q  115 cttgaagattcaagaagaggagagaacc-taggagctaaagtgaagcttgagctaggaaattgat--ctaactaaggtaaggggg-ttagaattcatcat 210  Q
    |||||||||||||||||||| ||| | | ||||||||||||||||||||| |||||||  |||||  |||||||||||||||||| ||||||||||||||    
T  23151660 cttgaagattcaagaagaggtgaggatcgtaggagctaaagtgaagcttgggctagga--ttgattactaactaaggtaaggggggttagaattcatcat 23151757  T
Q  211 aattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcatgatggttagaatccgtgctcctattatg 310  Q
    ||| ||||  ||||||  |||||| ||||||| ||||||| ||||||||| ||||| |||||||||||||||  | |||| ||| |||| ||| ||||||    
T  23151758 aatcattt--agtgta--ttttca-ttgttgtgtgaataagtgcttaattcagtaaatgattaattgttcatatttgttaaaattcgtgttccaattatg 23151852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 105 - 282
Target Start/End: Complemental strand, 29306852 - 29306673
Alignment:
Q  105 gaaggaggaacttgaagattcaagaagagg-agagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaag-ggggttagaa 202  Q
    ||||||| | |||||||||||||||||  | ||||| | ||||||||||| ||||||||| |||||||| |||  |||| ||||||||| ||||||||||    
T  29306852 gaaggagaagcttgaagattcaagaagtcgtagagatcttaggagctaaactgaagcttgggctaggaatttgtgctaattaaggtaagaggggttagaa 29306753  T
Q  203 ttca-tcataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcat 282  Q
    |||| ||||||| ||||| ||||||| |||||| ||||||||||| ||| ||||||||||| ||| ||||| |||||||||    
T  29306752 ttcaatcataatcatttt-agtgtaatttttcatttgttgtatgattaagtgcttaattgaataagtgattgattgttcat 29306673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 115 - 261
Target Start/End: Original strand, 23225903 - 23226049
Alignment:
Q  115 cttgaagattcaagaagaggagagaa-cctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattcatcataat 213  Q
    |||||||||||||||||||| ||| | ||||||||||||||||||||||| |||||||| |||  || | |||||||| |||||||||||||||||||||    
T  23225903 cttgaagattcaagaagaggtgaggatcctaggagctaaagtgaagcttgggctaggaatttgtgctcattaaggtaaaggggttagaattcatcataat 23226002  T
Q  214 tatttttagtgtaaattttcaattgttgtatgaataattgcttaattg 261  Q
     | |||||||| || ||||||||| ||||||||| || || |||||||    
T  23226003 ca-ttttagtgcaatttttcaattattgtatgaaaaagtgtttaattg 23226049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 115 - 322
Target Start/End: Complemental strand, 23158580 - 23158377
Alignment:
Q  115 cttgaagattcaagaagaggagagaa-cctaggagctaaagtgaagcttgagctagga--aattgatctaactaaggtaagggggttagaattcatcata 211  Q
    ||||||||||| |||||||| ||| | |||||||| |||||||||||||| |||||||  |||||||  ||||||| |||||| |||| ||||||| |||    
T  23158580 cttgaagattccagaagaggtgaggatcctaggagttaaagtgaagcttgggctaggattaattgat--aactaagataagggagttataattcattata 23158483  T
Q  212 attatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcatgatggttagaatccgtgctcctattatga 311  Q
    || ||||  ||||||| |||||  ||||||||||||||| |||||| |||||||| ||||||||||||||| || |||| ||| | |||||| |||||||    
T  23158482 atcattt--agtgtaa-ttttc--ttgttgtatgaataagtgcttatttgagtaaatgattaattgttcataattgttaaaattcatgctccaattatga 23158388  T
Q  312 ttttatgtttg 322  Q
    |  ||||||||    
T  23158387 tgatatgtttg 23158377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 115 - 282
Target Start/End: Complemental strand, 23837622 - 23837454
Alignment:
Q  115 cttgaagattcaagaagagga-gagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattca-tcataa 212  Q
    ||||||||||||||||   || |||| |||||||| ||||||||| |||| ||||||||   |   ||| ||||||||||||||||||||||| ||||||    
T  23837622 cttgaagattcaagaatttgaagagatcctaggagataaagtgaaccttgggctaggaatcggtgataattaaggtaagggggttagaattcaatcataa 23837523  T
Q  213 ttatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcat 282  Q
    | ||||| | | || ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  23837522 tcattttaa-tatagattttcaattgttgtatgaataagtgcttaattgagtaaatgattaattgttcat 23837454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 115 - 322
Target Start/End: Complemental strand, 26011913 - 26011710
Alignment:
Q  115 cttgaagattcaagaagagg-agagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattc-atcataa 212  Q
    ||||||||||||||||| || ||||| | |||||| |||||||||||||| |||||| |||||  |||| |||||||||||||||   |||| |||||||    
T  26011913 cttgaagattcaagaagtggtagagatcataggaggtaaagtgaagcttgggctagg-aattgtgctaattaaggtaagggggtt---attcaatcataa 26011818  T
Q  213 ttatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcatgatggttagaatccgtgctcctattatgat 312  Q
    | |  |||||||||| ||||||||| |||||||| ||| || |||||||||||| |||||||||||||||  | |||| ||| |||||||  ||||||||    
T  26011817 tca--tttagtgtaatttttcaattattgtatgattaagtgtttaattgagtaagtgattaattgttcatagttgttaaaattcgtgctctaattatgat 26011720  T
Q  313 tttatgtttg 322  Q
      ||||||||    
T  26011719 gatatgtttg 26011710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 88 - 213
Target Start/End: Original strand, 21259294 - 21259420
Alignment:
Q  88 agaggaaaagggttatcga-aggaggaacttgaagattcaagaagaggagaga-acctaggagctaaagtgaagcttgagctaggaaattgatctaacta 185  Q
    |||||||||||||||  || | |||||||||||||||||||| |  ||| ||| | |||||||||||| |||||||| ||||||| |||| |||||||||    
T  21259294 agaggaaaagggttagagagaagaggaacttgaagattcaaggattgga-agagagctaggagctaaattgaagcttaagctagggaattaatctaacta 21259392  T
Q  186 aggtaagggggttagaattcatcataat 213  Q
    ||||||||||||||||||||||||||||    
T  21259393 aggtaagggggttagaattcatcataat 21259420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 115 - 282
Target Start/End: Original strand, 33610877 - 33611044
Alignment:
Q  115 cttgaagattcaagaagaggagagaacc-taggagctaaagtgaagcttgagctagga--aattgatctaactaaggtaagggggttagaattca-tcat 210  Q
    ||||||||||||||||| || ||| | | ||||||||||||| || |||| |||||||  |||||  ||| |||||||||||||||||||||||| ||||    
T  33610877 cttgaagattcaagaagtggtgaggatcataggagctaaagttaaacttgggctaggattaattg--ctagctaaggtaagggggttagaattcaatcat 33610974  T
Q  211 aattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcat 282  Q
    ||| ||||  ||||||| |||||| ||||||||||  ||| || |||||||| ||| |||||||||||||||    
T  33610975 aatcattt--agtgtaatttttcatttgttgtatgtttaagtgattaattgaataagtgattaattgttcat 33611044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 177 - 282
Target Start/End: Complemental strand, 21681363 - 21681259
Alignment:
Q  177 atctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgttgtatgaataattgcttaa-ttgagtaattgattaat 275  Q
    |||||| |||||||||||||||||||||||||||||| |  |||| || || ||||||||| |||||||||||| ||||||| |||   |||||||||||    
T  21681363 atctaaataaggtaagggggttagaattcatcataatca--tttattgcaatttttcaattattgtatgaataagtgcttaatttgttgaattgattaat 21681266  T
Q  276 tgttcat 282  Q
    |||||||    
T  21681265 tgttcat 21681259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 142 - 282
Target Start/End: Original strand, 20561483 - 20561622
Alignment:
Q  142 ctaggagctaaagtgaagcttgagctaggaa-attgatctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaatt-gt 239  Q
    |||||||| ||| |||||| | ||||||| | ||| ||||||||||||||||||||||||||||||||||||| |   ||| || || |||||||||  |    
T  20561483 ctaggagcaaaattgaagcctaagctagggagattaatctaactaaggtaagggggttagaattcatcataatca---ttattgcaatttttcaattatt 20561579  T
Q  240 tgtatgaataattgcttaattgagt-aattgattaattgttcat 282  Q
    |||||||| || |||||||||| || ||||||||||||||||||    
T  20561580 tgtatgaa-aagtgcttaattgggtgaattgattaattgttcat 20561622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 142 - 282
Target Start/End: Original strand, 20573044 - 20573183
Alignment:
Q  142 ctaggagctaaagtgaagcttgagctaggaa-attgatctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaatt-gt 239  Q
    |||||||| ||| |||||| | ||||||| | ||| ||||||||||||||||||||||||||||||||||||| |   ||| || || |||||||||  |    
T  20573044 ctaggagcaaaattgaagcctaagctagggagattaatctaactaaggtaagggggttagaattcatcataatca---ttattgcaatttttcaattatt 20573140  T
Q  240 tgtatgaataattgcttaattgagt-aattgattaattgttcat 282  Q
    |||||| |||| |||||||||| || ||||||||||||||||||    
T  20573141 tgtatg-ataagtgcttaattgggtgaattgattaattgttcat 20573183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 182 - 283
Target Start/End: Complemental strand, 20481957 - 20481860
Alignment:
Q  182 actaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttca 281  Q
    |||||||||||||||||| ||||||||||||| | |||| ||   |||||||||||  ||||||||||| ||||||||||  |||||||||| |||||||    
T  20481957 actaaggtaagggggttaaaattcatcataatcactttt-gt---aattttcaattaatgtatgaataagtgcttaattggataattgattatttgttca 20481862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 182 - 282
Target Start/End: Original strand, 22234698 - 22234795
Alignment:
Q  182 actaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaatt-gttgtatgaataattgcttaattgagt-aattgattaattgtt 279  Q
    |||||||||||||||||||||||||||||||| | |||| ||   |||||||||||  ||||||| |||| ||||||||||| | |||||||||||||||    
T  22234698 actaaggtaagggggttagaattcatcataatcactttt-gt---aattttcaattatttgtatg-ataagtgcttaattgaatgaattgattaattgtt 22234792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 182 - 282
Target Start/End: Complemental strand, 25122795 - 25122698
Alignment:
Q  182 actaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaatt-gttgtatgaataattgcttaatt-gagtaattgattaattgtt 279  Q
    |||||||||||||||||||||||||||||||| ||| |||     |||||||||||  ||||||||| || ||||||||| ||  |||||||||||||||    
T  25122795 actaaggtaagggggttagaattcatcataatcattatta----taattttcaattatttgtatgaa-aagtgcttaattggatgaattgattaattgtt 25122701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 213
Target Start/End: Original strand, 20529705 - 20529777
Alignment:
Q  142 ctaggagctaaagtgaagcttgagctag-gaaattgatctaactaaggtaagggggttagaattcatcataat 213  Q
    |||||||| ||| |||||| | |||||| || ||| | ||||||||||||||||||||| |||||||||||||    
T  20529705 ctaggagcaaaattgaagcctaagctagagagattaacctaactaaggtaagggggttataattcatcataat 20529777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 213
Target Start/End: Complemental strand, 37612022 - 37611991
Alignment:
Q  182 actaaggtaagggggttagaattcatcataat 213  Q
    ||||||||||||||||||||||||||||||||    
T  37612022 actaaggtaagggggttagaattcatcataat 37611991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 248
Target Start/End: Original strand, 16404859 - 16404965
Alignment:
Q  143 taggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattcatcataattattttta-gtgtaaattttcaattgttg 241  Q
    ||||||| ||||||||||| ||||||  |  | ||  ||| |||||||||||||||||  ||||||||||| ||  |||  ||||||||||||| |||||    
T  16404859 taggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagtcttcatcataatcatcattatttgtaaattttcaaatgttg 16404958  T
Q  242 tatgaat 248  Q
    |||||||    
T  16404959 tatgaat 16404965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 202
Target Start/End: Original strand, 20653885 - 20653946
Alignment:
Q  142 ctaggagctaaagtgaagcttgagctaggaa-attgatctaactaaggtaagggggttagaa 202  Q
    |||||||| ||| |||||| | ||||||| | ||| ||||||||||||||||||||||||||    
T  20653885 ctaggagcaaaattgaagcctaagctagggagattaatctaactaaggtaagggggttagaa 20653946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 206
Target Start/End: Original strand, 19331168 - 19331231
Alignment:
Q  142 ctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattca 206  Q
    ||||||| |||| |||||||||||||||| | ||  ||||||||| |||||||||||||| ||||    
T  19331168 ctaggaggtaaattgaagcttgagctagg-attttttctaactaatgtaagggggttagatttca 19331231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 206
Target Start/End: Original strand, 37652267 - 37652330
Alignment:
Q  142 ctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattca 206  Q
    |||||| ||||||||||||||| ||||| || |||   ||| |||||||||||||||||||||||    
T  37652267 ctaggatctaaagtgaagcttgtgctag-aatttgtgttaattaaggtaagggggttagaattca 37652330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 38635507 - 38635563
Alignment:
Q  150 taaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattca 206  Q
    |||||||||||||  |||||||  ||   ||||||||||||||||||||||||||||    
T  38635507 taaagtgaagctttggctaggattttttgctaactaaggtaagggggttagaattca 38635563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 115; Significance: 2e-58; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 109 - 322
Target Start/End: Complemental strand, 13377959 - 13377745
Alignment:
Q  109 gaggaacttgaagattcaagaagagga-gagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattcat 207  Q
    ||||| |||||||||| |||||  ||| |||| | ||||||||||||||||||||| |||||||| | |   ||| ||||||||||||||||||||||||    
T  13377959 gaggagcttgaagatttaagaattggaagagatcttaggagctaaagtgaagcttgggctaggaattggtgataattaaggtaagggggttagaattcat 13377860  T
Q  208 cataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcatgatggttagaatccgtgctcctatt 307  Q
    |||||| |||||||||||||||||||||||||||||||||||| || || |||||||||| |||||||||||||| || |||||||| |||||||| |||    
T  13377859 cataatcatttttagtgtaaattttcaattgttgtatgaataagtgattcattgagtaatcgattaattgttcataattgttagaattcgtgctccaatt 13377760  T
Q  308 atgattttatgtttg 322  Q
    ||||| |||||||||    
T  13377759 atgatgttatgtttg 13377745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 109 - 322
Target Start/End: Complemental strand, 13275204 - 13274993
Alignment:
Q  109 gaggaacttgaagattcaagaagaggagaga-acctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattcat 207  Q
    |||||||||||||||||||| |  ||| ||| | ||||||||||||||||| |||||| |||| |||| |||||||||||||||||||||||||||||||    
T  13275204 gaggaacttgaagattcaaggattgga-agagagctaggagctaaagtgaatcttgagttagggaattaatctaactaaggtaagggggttagaattcat 13275106  T
Q  208 cataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcatgatggttagaatccgtgctcctatt 307  Q
    |||||| |||| |  ||  | |||||||||||||||||||||| ||||||||||||||||||||||||||||||| || |||||||| |||||||| |||    
T  13275105 cataatcatttat--tgccatttttcaattgttgtatgaataagtgcttaattgagtaattgattaattgttcataattgttagaattcgtgctccaatt 13275008  T
Q  308 atgattttatgtttg 322  Q
    |||||  ||||||||    
T  13275007 atgatgatatgtttg 13274993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 81 - 309
Target Start/End: Original strand, 49047465 - 49047692
Alignment:
Q  81 ggagcagagaggaaaagggttatcga-aggaggaacttgaagattcaagaagaggagaga-acctaggagctaaagtgaagcttgagctaggaaattgat 178  Q
    |||||| |||||||||||||||  || | |||||||||||||||||||| |  ||| ||| | |||||||||||| |||||||||| ||||| |||| ||    
T  49047465 ggagcaaagaggaaaagggttagagagaagaggaacttgaagattcaaggattgga-agagagctaggagctaaattgaagcttgaactagggaattaat 49047563  T
Q  179 ctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgt 278  Q
    ||||||||||||||||||||||||||||||||||| |  |||| ||  | |||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  49047564 ctaactaaggtaagggggttagaattcatcataatca--tttattgccatttttcaattgttatatgaataagtgcttaattgagtaattgattaattgt 49047661  T
Q  279 tcatgatggttagaatccgtgctcctattat 309  Q
    |||  || ||||||||  ||||||| |||||    
T  49047662 tcagaattgttagaatttgtgctccaattat 49047692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 115 - 322
Target Start/End: Original strand, 16914752 - 16914959
Alignment:
Q  115 cttgaagattcaagaagagg-agagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattca-tcataa 212  Q
    |||||||||| |||||| || ||||| ||||||||||||||||||| ||| |||||||| |||  |||| |||||||| |||||||||||||| ||| ||    
T  16914752 cttgaagattgaagaagtggtagagatcctaggagctaaagtgaagtttgggctaggaatttgtcctaattaaggtaaaggggttagaattcaatcacaa 16914851  T
Q  213 ttatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcatgatggttagaatccgtgctcctattatgat 312  Q
    | ||||  ||||||| ||||||||| |||||||| ||| ||||||||||||||| |||||||||||||||  | |||| ||| |||||||  ||||||||    
T  16914852 tcattt--agtgtaacttttcaattattgtatgattaagtgcttaattgagtaagtgattaattgttcatagttgttaaaattcgtgctctaattatgat 16914949  T
Q  313 tttatgtttg 322  Q
      ||||||||    
T  16914950 gatatgtttg 16914959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 115 - 282
Target Start/End: Original strand, 34241031 - 34241198
Alignment:
Q  115 cttgaagattcaagaagagg-agagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattca-tcataa 212  Q
    ||||||||||||||||| || ||||| |||| |||||||||||||||||| | || ||| |||  |||||||||||||||||||||||||||| ||||||    
T  34241031 cttgaagattcaagaagtggtagagatcctatgagctaaagtgaagcttgggttaagaatttgtgctaactaaggtaagggggttagaattcaatcataa 34241130  T
Q  213 ttatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcat 282  Q
    | ||||  ||||||| |||||| ||||||||||| ||| || |||||||||||| |||||||||||||||    
T  34241131 tcattt--agtgtaatttttcatttgttgtatgattaagtgattaattgagtaagtgattaattgttcat 34241198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 115 - 282
Target Start/End: Complemental strand, 48357066 - 48356900
Alignment:
Q  115 cttgaagattcaagaagagg-agagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattca-tcataa 212  Q
    ||||||||||||||||| || ||||| |||||||| |||||||||||||| |||||||| |||  |||| ||||||||||||||||||||||| ||||||    
T  48357066 cttgaagattcaagaagtggtagagatcctaggagttaaagtgaagcttgggctaggaa-ttgtgctaattaaggtaagggggttagaattcaatcataa 48356968  T
Q  213 ttatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcat 282  Q
    | ||||  ||||||| |||||| | ||||||||| ||| ||||||||||||||| |||||||||||||||    
T  48356967 tcattt--agtgtaatttttcattcgttgtatgattaaatgcttaattgagtaagtgattaattgttcat 48356900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 81 - 177
Target Start/End: Complemental strand, 9081061 - 9080965
Alignment:
Q  81 ggagcagagaggaaaagggttatcgaaggaggaacttgaagattcaagaagaggagagaacctaggagctaaagtgaagcttgagctaggaaattga 177  Q
    |||||| |||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  9081061 ggagcaaagaggaaaagggttagagaaggagaaacttgaagattcaagaagaggagagaacctaggagctaaagtgaagcttgagctagggaattga 9080965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 115 - 322
Target Start/End: Complemental strand, 9611731 - 9611524
Alignment:
Q  115 cttgaagattcaagaagagg-agagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattca-tcataa 212  Q
    ||||||||||||||||| || ||||| ||||||||||||||||||||||  || ||||| ||   |||| ||||||||| ||||||||||||| ||||||    
T  9611731 cttgaagattcaagaagtggtagagatcctaggagctaaagtgaagcttcggcgaggaatttttgctaattaaggtaagagggttagaattcaatcataa 9611632  T
Q  213 ttatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcatgatggttagaatccgtgctcctattatgat 312  Q
    | ||||  ||||||| ||||||||| |||||| | ||| ||||||||||||||  |||||||||||||||  | |||| ||| |||||||  ||||||||    
T  9611631 tcattt--agtgtaatttttcaattattgtatcattaagtgcttaattgagtacgtgattaattgttcatagttgttaaaattcgtgctctaattatgat 9611534  T
Q  313 tttatgtttg 322  Q
      ||||||||    
T  9611533 gatatgtttg 9611524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 115 - 322
Target Start/End: Complemental strand, 9839302 - 9839095
Alignment:
Q  115 cttgaagattcaagaagagg-agagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattca-tcataa 212  Q
    ||||||||||||||||| || ||||| ||||||||||||||||||||||  || ||||| ||   |||| ||||||||| ||||||||||||| ||||||    
T  9839302 cttgaagattcaagaagtggtagagatcctaggagctaaagtgaagcttcggcgaggaatttttgctaattaaggtaagagggttagaattcaatcataa 9839203  T
Q  213 ttatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcatgatggttagaatccgtgctcctattatgat 312  Q
    | ||||  ||||||| ||||||||| |||||| | ||| ||||||||||||||  |||||||||||||||  | |||| ||| |||||||  ||||||||    
T  9839202 tcattt--agtgtaatttttcaattattgtatcattaagtgcttaattgagtacgtgattaattgttcatagttgttaaaattcgtgctctaattatgat 9839105  T
Q  313 tttatgtttg 322  Q
      ||||||||    
T  9839104 gatatgtttg 9839095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 112 - 322
Target Start/End: Original strand, 17223757 - 17223969
Alignment:
Q  112 gaacttgaagattcaagaagagga-gagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattca-tca 209  Q
    ||||||||| |||||||||  ||| |||| |||| ||| |||||||||||||| |||| ||| | |   ||| ||||||||||||||||||||||| |||    
T  17223757 gaacttgaaaattcaagaattggaagagatcctacgaggtaaagtgaagcttgggctaagaattggtgataattaaggtaagggggttagaattcaatca 17223856  T
Q  210 taattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcatgatggttagaatccgtgctcctattat 309  Q
    |||| ||||||||||||| ||||||||| || ||||| ||| ||||||||||||||| | ||||||||||||   | |||| ||| |||||||  |||||    
T  17223857 taatcatttttagtgtaatttttcaattattttatgattaagtgcttaattgagtaaataattaattgttcaaagttgttataattcgtgctctaattat 17223956  T
Q  310 gattttatgtttg 322  Q
    |||  ||||||||    
T  17223957 gatgatatgtttg 17223969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 143 - 282
Target Start/End: Original strand, 12247973 - 12248111
Alignment:
Q  143 taggagctaaagtgaagcttgagctaggaa-attgatctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgttg 241  Q
    ||||||| ||| |||||| | ||||||| | ||| ||||||||||||||||||||||||||||||||||||| |  | || || || ||||||||| |||    
T  12247973 taggagcaaaattgaagcctaagctagggagattaatctaactaaggtaagggggttagaattcatcataatca--tatattgcaatttttcaattattg 12248070  T
Q  242 tatgaataattgcttaattgagtaattgattaattgttcat 282  Q
    ||||||||| ||||||||||  |||||||||| ||||||||    
T  12248071 tatgaataagtgcttaattggataattgattacttgttcat 12248111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 115 - 282
Target Start/End: Original strand, 14271723 - 14271891
Alignment:
Q  115 cttgaagattcaagaagagga-gagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattca-tcataa 212  Q
    ||||||||||||||||  ||| || | |||| ||| |||||||||||||  | |||||| | |   ||| |||||||||||  |||||||||| ||||||    
T  14271723 cttgaagattcaagaattggaagatatcctatgagttaaagtgaagcttaggttaggaattggtgataattaaggtaagggaattagaattcaatcataa 14271822  T
Q  213 ttatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcat 282  Q
    | ||||| ||||||| ||||||||| |||||||||||| ||||||||||||||| |||||||||||||||    
T  14271823 tcatttt-agtgtaatttttcaattattgtatgaataagtgcttaattgagtaaatgattaattgttcat 14271891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 109 - 282
Target Start/End: Complemental strand, 11287843 - 11287673
Alignment:
Q  109 gaggaacttgaagattcaagaagaggagagaacctaggagctaaagtgaagcttgagctaggaa-attgatctaactaaggtaagggggttagaattcat 207  Q
    |||||||||||||| ||||| || ||||||| | ||||||| ||| |||||  | ||||||| | ||| |||||||||||||||||||||||||||||||    
T  11287843 gaggaacttgaagaatcaaggagtggagagagc-taggagcaaaattgaagtctaagctagggagattaatctaactaaggtaagggggttagaattcat 11287745  T
Q  208 cataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagt-aattgattaattgttcat 282  Q
    |||||| |   ||| || || ||||||||| ||||||||| || || ||||||| || ||||||||||||||||||    
T  11287744 cataatca---ttattgcaatttttcaattattgtatgaa-aagtgtttaattgggtgaattgattaattgttcat 11287673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 142 - 282
Target Start/End: Original strand, 16569858 - 16569996
Alignment:
Q  142 ctaggagctaaagtgaagcttgagctaggaa-attgatctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgtt 240  Q
    |||||||||||| |||||| | ||||||| | ||| ||||||| ||||||||||||||| ||||||||||||| ||| ||   | || ||||||||| ||    
T  16569858 ctaggagctaaattgaagcataagctagggagattaatctaacaaaggtaagggggttaaaattcatcataatcattatt---gcaatttttcaattatt 16569954  T
Q  241 gtatgaataattgcttaattgagtaattgattaattgttcat 282  Q
    |||||||||| ||||||||||  |||||||||| ||| ||||    
T  16569955 gtatgaataagtgcttaattggataattgattatttgctcat 16569996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 142 - 282
Target Start/End: Complemental strand, 16595804 - 16595666
Alignment:
Q  142 ctaggagctaaagtgaagcttgagctaggaa-attgatctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgtt 240  Q
    |||||||||||| |||||| | ||||||| | ||| ||||||| ||||||||||||||| ||||||||||||| ||| ||   | || ||||||||| ||    
T  16595804 ctaggagctaaattgaagcataagctagggagattaatctaacaaaggtaagggggttaaaattcatcataatcattatt---gcaatttttcaattatt 16595708  T
Q  241 gtatgaataattgcttaattgagtaattgattaattgttcat 282  Q
    |||||||||| ||||||||||  |||||||||| ||| ||||    
T  16595707 gtatgaataagtgcttaattggataattgattatttgctcat 16595666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 179 - 282
Target Start/End: Original strand, 26070156 - 26070255
Alignment:
Q  179 ctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgt 278  Q
    ||||||||||||||||| ||||||||||||||||| ||| ||   | || ||||||||| | |||||||||| |||||||||| ||||||||||||||||    
T  26070156 ctaactaaggtaagggg-ttagaattcatcataatcattatt---gcaatttttcaattatggtatgaataagtgcttaattgtgtaattgattaattgt 26070251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 179 - 282
Target Start/End: Original strand, 26093943 - 26094042
Alignment:
Q  179 ctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgt 278  Q
    ||||||||||||||||| ||||||||||||||||| ||| ||   | || ||||||||| | |||||||||| |||||||||| ||||||||||||||||    
T  26093943 ctaactaaggtaagggg-ttagaattcatcataatcattatt---gcaatttttcaattatggtatgaataagtgcttaattgtgtaattgattaattgt 26094038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 135 - 257
Target Start/End: Complemental strand, 16919934 - 16919811
Alignment:
Q  135 agagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattc-atcataattatttttagtgtaa-atttt 232  Q
    ||||| ||||||||||||||||||||||| |||||||| | |   ||| |||| ||||||||||| ||||| |||||||| | |||||||||||  ||||    
T  16919934 agagatcctaggagctaaagtgaagcttgggctaggaattggtgataattaagataagggggttaaaattcaatcataatca-ttttagtgtaatttttt 16919836  T
Q  233 caattgttgtatgaataattgctta 257  Q
    |||||||||||||||||| ||||||    
T  16919835 caattgttgtatgaataagtgctta 16919811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 115 - 200
Target Start/End: Complemental strand, 13389778 - 13389693
Alignment:
Q  115 cttgaagattcaagaagaggagagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttag 200  Q
    ||||||||||||||||  ||||||| ||||||||||||||||||||||| |||||||| | |   ||| |||||||||||||||||    
T  13389778 cttgaagattcaagaattggagagatcctaggagctaaagtgaagcttgggctaggaattggtgataattaaggtaagggggttag 13389693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 183 - 262
Target Start/End: Complemental strand, 25124483 - 25124406
Alignment:
Q  183 ctaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattga 262  Q
    ||||||||||||||||||  ||||||||||| ||||  ||||||| |||||| ||||||||||| ||| |||||||||||    
T  25124483 ctaaggtaagggggttagtcttcatcataatcattt--agtgtaatttttcatttgttgtatgattaagtgcttaattga 25124406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 179 - 282
Target Start/End: Original strand, 45452058 - 45452159
Alignment:
Q  179 ctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaatt-gttgtatgaataattgcttaattgagt-aattgattaatt 276  Q
    ||||||||||||||||||||||||||||||||||| |||| | |    |||||||||||  ||||||||| || |||||||||| || ||||||||||||    
T  45452058 ctaactaaggtaagggggttagaattcatcataatcatttattg---caattttcaattatttgtatgaa-aagtgcttaattgggtgaattgattaatt 45452153  T
Q  277 gttcat 282  Q
    ||||||    
T  45452154 gttcat 45452159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 213
Target Start/End: Complemental strand, 12759345 - 12759311
Alignment:
Q  179 ctaactaaggtaagggggttagaattcatcataat 213  Q
    |||||||||||||||||||||||||||||||||||    
T  12759345 ctaactaaggtaagggggttagaattcatcataat 12759311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 213
Target Start/End: Original strand, 13862823 - 13862857
Alignment:
Q  179 ctaactaaggtaagggggttagaattcatcataat 213  Q
    |||||||||||||||||||||||||||||||||||    
T  13862823 ctaactaaggtaagggggttagaattcatcataat 13862857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 142 - 282
Target Start/End: Complemental strand, 35095208 - 35095071
Alignment:
Q  142 ctaggagctaaagtgaagcttgagct-aggaaattgatctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaatt-gt 239  Q
    |||||||| ||| |||||||| |||| |||| ||| | ||| ||||||||||||||||||||||||||||||| | |||| ||   |||||||||||  |    
T  35095208 ctaggagcaaaattgaagcttaagcttaggagattaaccta-ctaaggtaagggggttagaattcatcataatcactttt-gt---aattttcaattatt 35095114  T
Q  240 tgtatgaataattgcttaatt-gagtaattgattaattgttcat 282  Q
    |||||| |||| ||||||||| ||  ||||||||||||||||||    
T  35095113 tgtatg-ataagtgcttaattggatgaattgattaattgttcat 35095071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 142 - 282
Target Start/End: Original strand, 39046481 - 39046619
Alignment:
Q  142 ctaggagctaaagtgaagcttgagct-aggaaattgatctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaatt-gt 239  Q
    |||||||| ||| |||||||| |||| |||| ||| | ||| ||||||||||||||||||||||||||||||| | |||   ||| | |||||||||  |    
T  39046481 ctaggagcaaaattgaagcttaagcttaggagattaaccta-ctaaggtaagggggttagaattcatcataatcacttt---tgttatttttcaattatt 39046576  T
Q  240 tgtatgaataattgcttaatt-gagtaattgattaattgttcat 282  Q
    |||||| |||| ||||||||| ||  ||||||||||||||||||    
T  39046577 tgtatg-ataagtgcttaattggatgaattgattaattgttcat 39046619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 282
Target Start/End: Complemental strand, 3895378 - 3895281
Alignment:
Q  182 actaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaatt-gttgtatgaataattgcttaatt-gagtaattgattaattgtt 279  Q
    |||||||||||||||||||||||||||||||| | |||| ||   |||||||||||  ||||||| |||| ||||||||| ||  |||||||||||||||    
T  3895378 actaaggtaagggggttagaattcatcataatcactttt-gt---aattttcaattatttgtatg-ataagtgcttaattggatgaattgattaattgtt 3895284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 282
Target Start/End: Original strand, 15822325 - 15822423
Alignment:
Q  182 actaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaatt-gttgtatgaataattgcttaattgagt-aattgattaattgtt 279  Q
    |||||||||||||||||||||||||||||||| | || | ||   |||||||| ||  ||||||||| || |||||||||| || |||||||||||||||    
T  15822325 actaaggtaagggggttagaattcatcataatcacttattgt---aattttcagttatttgtatgaa-aagtgcttaattgggtgaattgattaattgtt 15822420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 213
Target Start/End: Complemental strand, 143993 - 143962
Alignment:
Q  182 actaaggtaagggggttagaattcatcataat 213  Q
    ||||||||||||||||||||||||||||||||    
T  143993 actaaggtaagggggttagaattcatcataat 143962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 93 - 160
Target Start/End: Complemental strand, 15709592 - 15709525
Alignment:
Q  93 aaaagggttatcgaaggaggaacttgaagattcaagaagaggagagaacctaggagctaaagtgaagc 160  Q
    ||||||||||  ||||||| |||||||||| |||||||  |||| || | ||||||||||||||||||    
T  15709592 aaaagggttagagaaggagaaacttgaagaatcaagaattggagtgagcttaggagctaaagtgaagc 15709525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 213
Target Start/End: Complemental strand, 47290139 - 47290105
Alignment:
Q  179 ctaactaaggtaagggggttagaattcatcataat 213  Q
    |||| ||||||||||||||||||||||||||||||    
T  47290139 ctaattaaggtaagggggttagaattcatcataat 47290105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 218
Target Start/End: Complemental strand, 15359191 - 15359115
Alignment:
Q  142 ctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattc-atcataattattt 218  Q
    |||||| ||||| ||||||||| |||||||  |||  |||| |||||||||||||||||||||| |||||||| ||||    
T  15359191 ctaggatctaaattgaagcttgggctaggat-ttgtgctaattaaggtaagggggttagaattcaatcataatcattt 15359115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 12369693 - 12369761
Alignment:
Q  143 taggagctaaagtgaagcttgagctag-gaaattgatctaactaaggtaagggggttagaattcatcat 210  Q
    ||||||| ||| |||||| | |||||| || ||| | ||||||||||||||||||||||| ||||||||    
T  12369693 taggagcgaaattgaagcctaagctagagagattaacctaactaaggtaagggggttagatttcatcat 12369761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 112; Significance: 1e-56; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 115 - 322
Target Start/End: Original strand, 116382 - 116589
Alignment:
Q  115 cttgaagattcaagaagaggagagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattcatcataatt 214  Q
    ||||||||||||| ||  ||||||| ||||||||||||||||||||||| |||||||| | |   ||| |||||||||||||||||| |||||||||||     
T  116382 cttgaagattcaataattggagagatcctaggagctaaagtgaagcttgggctaggaattggtgataattaaggtaagggggttagatttcatcataatc 116481  T
Q  215 atttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcatgatggttagaatccgtgctcctattatgattt 314  Q
    |||||||||||||||||| ||| ||||||||||||| ||||||||||||||| | |||||||| |||| || |||||||| |||||||| |||||||| |    
T  116482 atttttagtgtaaattttgaatggttgtatgaataagtgcttaattgagtaaattattaattgctcataattgttagaattcgtgctccaattatgatgt 116581  T
Q  315 tatgtttg 322  Q
    ||||||||    
T  116582 tatgtttg 116589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 213
Target Start/End: Complemental strand, 164567 - 164536
Alignment:
Q  182 actaaggtaagggggttagaattcatcataat 213  Q
    ||||||||||||||||||||||||||||||||    
T  164567 actaaggtaagggggttagaattcatcataat 164536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 109 - 322
Target Start/End: Original strand, 2136 - 2347
Alignment:
Q  109 gaggaacttgaagattcaagaagaggagaga-acctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattcat 207  Q
    |||||||||||||||||||| |  ||| ||| | ||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||    
T  2136 gaggaacttgaagattcaaggattgga-agagagctaggagctaaagtgaagcttgagcaagagaattgatctaactaaggtaagggggttagaattcat 2234  T
Q  208 cataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcatgatggttagaatccgtgctcctatt 307  Q
    |||||| | ||||||||  |||||| ||||||||||||||||| |||||||||||||||||||||||||  |||| ||  ||||||| |||||||| |||    
T  2235 cataatca-ttttagtg-caatttttaattgttgtatgaataagtgcttaattgagtaattgattaattaatcataattattagaattcgtgctccaatt 2332  T
Q  308 atgattttatgtttg 322  Q
    ||||| |||||||||    
T  2333 atgatgttatgtttg 2347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 81 - 322
Target Start/End: Complemental strand, 3776 - 3535
Alignment:
Q  81 ggagcagagaggaaaagggttatcga-aggaggaacttgaagattcaagaagaggagaga-acctaggagctaaagtgaagcttgagctaggaa-attga 177  Q
    |||||| |||||||||||||||  || | |||||||||||||||||||| |  ||| ||| | |||||||||||| |||||||| || ||||   ||| |    
T  3776 ggagcaaagaggaaaagggttagtgagaagaggaacttgaagattcaaggattgga-agagagctaggagctaaattgaagcttaagatagggggattaa 3678  T
Q  178 tctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattg 277  Q
    |||||||||||||||||||||||||||||||||||| |||| |  || || ||| ||||| |||||||||||| ||||||||||||||||||||||||||    
T  3677 tctaactaaggtaagggggttagaattcatcataatcatttat--tgcaattttacaattattgtatgaataagtgcttaattgagtaattgattaattg 3580  T
Q  278 ttcatgatggttagaatccgtgctcctattatgattttatgtttg 322  Q
    ||||| || |||||||| |||||||| |||||||| |||||||||    
T  3579 ttcataattgttagaattcgtgctccaattatgatgttatgtttg 3535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 115 - 282
Target Start/End: Original strand, 104448 - 104614
Alignment:
Q  115 cttgaagattcaagaagaggagagaac-ctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattcatcataat 213  Q
    |||||||||||||||||||| ||| |  |||||||||||||||||||||| |||| ||| |||  |||| ||||||||| ||||||||||||||||||||    
T  104448 cttgaagattcaagaagaggtgaggatactaggagctaaagtgaagcttgggctaagaatttgtgctaattaaggtaagtgggttagaattcatcataat 104547  T
Q  214 tatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcat 282  Q
     ||||  ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  104548 cattt--agtgtaatttttcaattgttgtatgaataattgcttaattgagtaagtgattaattgttcat 104614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 97; Significance: 1e-47; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 142 - 282
Target Start/End: Original strand, 1398 - 1537
Alignment:
Q  142 ctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgttg 241  Q
    ||||||||||||||||||||||||||||| |||| ||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||    
T  1398 ctaggagctaaagtgaagcttgagctagggaattaatctatctaaggtaaggggtttagaattcatcataatta-ttttagtgtaaattttcaattattg 1496  T
Q  242 tatgaataattgcttaattgagtaattgattaattgttcat 282  Q
    ||||||||| ||||||||||  ||| |||||||||||||||    
T  1497 tatgaataagtgcttaattggataaatgattaattgttcat 1537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 142 - 282
Target Start/End: Original strand, 8543 - 8682
Alignment:
Q  142 ctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgttg 241  Q
    ||||||||||||||||||||||||||||| |||| ||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||    
T  8543 ctaggagctaaagtgaagcttgagctagggaattaatctatctaaggtaaggggtttagaattcatcataatta-ttttagtgtaaattttcaattattg 8641  T
Q  242 tatgaataattgcttaattgagtaattgattaattgttcat 282  Q
    ||||||||| ||||||||||  ||| |||||||||||||||    
T  8642 tatgaataagtgcttaattggataaatgattaattgttcat 8682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1272 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold1272
Description:

Target: scaffold1272; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 112 - 281
Target Start/End: Complemental strand, 721 - 550
Alignment:
Q  112 gaacttgaagattcaagaagagg-agagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattca-tca 209  Q
    ||||| |||||||||||||  || ||||| ||||||||||||||||||||||| |||||||| | |   ||| || |||||||||||||||||| | |||    
T  721 gaactagaagattcaagaattggtagagatcctaggagctaaagtgaagcttgggctaggaattagtgataattatggtaagggggttagaattgaatca 622  T
Q  210 taattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttca 281  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  621 taatcatttttagtgtaaattttcaattgttgtatgaataagtgcttaattgagtaaatgattaattgttca 550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 91; Significance: 4e-44; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 115 - 282
Target Start/End: Original strand, 43622 - 43789
Alignment:
Q  115 cttgaagattcaagaagagg-agagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattca-tcataa 212  Q
    |||||||||| |||||| || ||||| ||||||||||||||||||||||| |||||||| |||  |||| ||||||||||||||||||||||| ||||||    
T  43622 cttgaagatttaagaagtggtagagatcctaggagctaaagtgaagcttgggctaggaatttgtgctaattaaggtaagggggttagaattcaatcataa 43721  T
Q  213 ttatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcat 282  Q
    | ||||  ||||||| |||||||||||||||||| ||| ||||||||||||||| |||||||||||||||    
T  43722 tcattt--agtgtaatttttcaattgttgtatgattaagtgcttaattgagtaagtgattaattgttcat 43789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 81 - 322
Target Start/End: Complemental strand, 8262 - 8021
Alignment:
Q  81 ggagcagagaggaaaagggttatcga-aggaggaacttgaagattcaagaagaggagaga-acctaggagctaaagtgaagcttgagctaggaa-attga 177  Q
    |||||| |||||||||||||||  || | ||||||||||| |||||||| |  ||| ||| | |||||||||||| |||||||| |||||||   ||| |    
T  8262 ggagcaaagaggaaaagggttagtgagaagaggaacttgacgattcaaggattgga-agagagctaggagctaaattgaagcttaagctagggggattaa 8164  T
Q  178 tctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattg 277  Q
    ||||||||||||||||||||||||||||||| |||| |||| |  || || ||| ||||| |||||||||||| ||||||||||||||||||||||||||    
T  8163 tctaactaaggtaagggggttagaattcatcgtaatcatttat--tgcaattttacaattattgtatgaataagtgcttaattgagtaattgattaattg 8066  T
Q  278 ttcatgatggttagaatccgtgctcctattatgattttatgtttg 322  Q
    |||||  | |||||||| |||||||| |||||||| |||||||||    
T  8065 ttcatatttgttagaattcgtgctccaattatgatgttatgtttg 8021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409 (Bit Score: 85; Significance: 2e-40; HSPs: 2)
Name: scaffold0409
Description:

Target: scaffold0409; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 142 - 282
Target Start/End: Original strand, 1200 - 1339
Alignment:
Q  142 ctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgttg 241  Q
    ||||||||||||||||||||||| ||||| |||| ||||| ||||||||||||||||||||||||||||||| | | ||||||||| ||||||||| |||    
T  1200 ctaggagctaaagtgaagcttgatctagggaattaatctatctaaggtaagggggttagaattcatcataatca-tattagtgtaatttttcaattattg 1298  T
Q  242 tatgaataattgcttaattgagtaattgattaattgttcat 282  Q
    ||||||||| ||||||||||  ||| |||||||||||||||    
T  1299 tatgaataagtgcttaattggataaatgattaattgttcat 1339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 142 - 282
Target Start/End: Original strand, 9455 - 9594
Alignment:
Q  142 ctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgttg 241  Q
    ||||||||||||||||||||||| ||||| |||| ||||| ||||||||||||||||||||||||||||||| | | ||||||||| ||||||||| |||    
T  9455 ctaggagctaaagtgaagcttgatctagggaattaatctatctaaggtaagggggttagaattcatcataatca-tattagtgtaatttttcaattattg 9553  T
Q  242 tatgaataattgcttaattgagtaattgattaattgttcat 282  Q
    ||||||||| ||||||||||  ||| |||||||||||||||    
T  9554 tatgaataagtgcttaattggataaatgattaattgttcat 9594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 142 - 312
Target Start/End: Complemental strand, 31415 - 31246
Alignment:
Q  142 ctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattca-tcataattatttttagtgtaaattttcaattgtt 240  Q
    |||||||||||||||||||||| |||||||| |||  |||| ||||||||||||||||||||||| ||||||| ||||  ||||||| ||||||||| ||    
T  31415 ctaggagctaaagtgaagcttgggctaggaatttgtgctaattaaggtaagggggttagaattcaatcataatcattt--agtgtaatttttcaattatt 31318  T
Q  241 gtatgaataattgcttaattgagtaattgattaattgttcatgatggttagaatccgtgctcctattatgat 312  Q
    |||||| ||| ||||||||||||||| |||||||||||||||  | |||||||| |||||||  ||||||||    
T  31317 gtatgattaagtgcttaattgagtaagtgattaattgttcatagttgttagaattcgtgctctaattatgat 31246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 110 - 281
Target Start/End: Complemental strand, 7090 - 6917
Alignment:
Q  110 aggaacttgaagattcaagaagagg-agagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattca-t 207  Q
    |||| ||||||||||||||||  || ||||| ||||||||||||||||||| ||| |||||||| | |   ||| || |||||||||||||||||| | |    
T  7090 aggagcttgaagattcaagaattggtagagatcctaggagctaaagtgaaggttgggctaggaattggtgataattatggtaagggggttagaattgaat 6991  T
Q  208 cataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttca 281  Q
    |||||| |||||||||||||||||||||||||||||||||||| ||||||| || |||| ||||||||||||||    
T  6990 cataatcatttttagtgtaaattttcaattgttgtatgaataaatgcttaaatgtgtaaatgattaattgttca 6917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 115 - 321
Target Start/End: Complemental strand, 69880 - 69674
Alignment:
Q  115 cttgaagattcaagaagagg-agagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattca-tcataa 212  Q
    ||||||||||||||||| || ||||| |||||||| |||||||||||||| |||||||| |||  |||| |||| |||||||||||||||||| ||||||    
T  69880 cttgaagattcaagaagtggtagagatcctaggagttaaagtgaagcttgggctaggaatttgtgctaattaagataagggggttagaattcaatcataa 69781  T
Q  213 ttatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcatgatggttagaatccgtgctcctattatgat 312  Q
    | ||||  ||||||| ||||||||| |||||||| ||| |||||||||||| || |||||||||||||||  | |||| ||| |||||||  ||||||||    
T  69780 tcattt--agtgtaatttttcaattattgtatgattaagtgcttaattgagaaagtgattaattgttcatagttgttaaaattcgtgctctaattatgat 69683  T
Q  313 tttatgttt 321  Q
      |||||||    
T  69682 gatatgttt 69674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 115 - 281
Target Start/End: Complemental strand, 35902 - 35735
Alignment:
Q  115 cttgaagattcaagaagagga-gagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattca-tcataa 212  Q
    ||||||||||||||||  ||| |||| ||||||||||||||||||||||| |||||||| | |   ||| ||||||||||||||||||||||| ||||||    
T  35902 cttgaagattcaagaattggaagagatcctaggagctaaagtgaagcttgggctaggaattggtgataattaaggtaagggggttagaattcaatcataa 35803  T
Q  213 ttatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttca 281  Q
    | ||||| ||||||| |||||||||||||||||||||  |||||||||||||||  |||||||||||||    
T  35802 tcatttt-agtgtaatttttcaattgttgtatgaataggtgcttaattgagtaaaagattaattgttca 35735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0521 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0521
Description:

Target: scaffold0521; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 142 - 282
Target Start/End: Complemental strand, 11488 - 11351
Alignment:
Q  142 ctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgttg 241  Q
    ||||||| |||||||||||| |||||||| |||| ||||||||||||||||||| ||| ||||||||||||| ||||  ||||||| ||||||||| |||    
T  11488 ctaggaggtaaagtgaagctagagctagggaattaatctaactaaggtaagggg-ttataattcatcataatcattt--agtgtaatttttcaattattg 11392  T
Q  242 tatgaataattgcttaattgagtaattgattaattgttcat 282  Q
    ||||||||| ||||||||||||||  |||||||||||||||    
T  11391 tatgaataagtgcttaattgagtagatgattaattgttcat 11351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 142 - 282
Target Start/End: Original strand, 22281 - 22420
Alignment:
Q  142 ctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgttg 241  Q
    |||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||| | ||||||||| | |||| |||| |||    
T  22281 ctaggagctaaagtgaagcttgaggtagggaattaatctaactaaggtaagggggttagaattcatcataatca-ttttagtgttattttttaattattg 22379  T
Q  242 tatgaataattgcttaattgagtaattgattaattgttcat 282  Q
    ||||||||| || |||||||  | ||||||| |||||||||    
T  22380 tatgaataagtgattaattggatgattgattgattgttcat 22420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 115 - 280
Target Start/End: Original strand, 197078 - 197242
Alignment:
Q  115 cttgaagattcaagaagagg-agagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattca-tcataa 212  Q
    ||||||||||||||||| || ||||| ||||||||||||||||||||||| |||||||| |||  |||| ||||||||||||||||||||||| ||||||    
T  197078 cttgaagattcaagaagtggtagagatcctaggagctaaagtgaagcttgggctaggaa-ttgtgctaattaaggtaagggggttagaattcaatcataa 197176  T
Q  213 ttatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttc 280  Q
    | ||||  ||||||| |||||| ||||||||||| ||| ||||||||||  ||| |||||||||||||    
T  197177 tcattt--agtgtaatttttcatttgttgtatgattaagtgcttaattggataagtgattaattgttc 197242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0970 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0970
Description:

Target: scaffold0970; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 199 - 325
Target Start/End: Complemental strand, 2795 - 2668
Alignment:
Q  199 agaattcatcataattatttttagtgtaaatttt-caattgttgtatgaataattgcttaattgagtaattgattaattgttcatgatggttagaatccg 297  Q
    ||||||||||||||| ||||||||||| |||||| |||||||||||||| ||| ||||| |||||||||||||||||||| |||||||  ||||||| ||    
T  2795 agaattcatcataatcatttttagtgtcaatttttcaattgttgtatgagtaagtgctttattgagtaattgattaattggtcatgattattagaattcg 2696  T
Q  298 tgctcctattatgattttatgtttgtat 325  Q
    |||||||||||||||  |||||||||||    
T  2695 tgctcctattatgatggtatgtttgtat 2668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0700 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0700
Description:

Target: scaffold0700; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 115 - 322
Target Start/End: Complemental strand, 2948 - 2741
Alignment:
Q  115 cttgaagattcaagaagagg-agagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattc-atcataa 212  Q
    ||||||||||||||||| || ||||| ||||||||||||||||||| |||||||||||| ||   |||||||||||||| |||||||||||| |||||||    
T  2948 cttgaagattcaagaagtggtagagatcctaggagctaaagtgaagtttgagctaggaatttttgctaactaaggtaagcgggttagaattcaatcataa 2849  T
Q  213 ttatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcatgatggttagaatccgtgctcctattatgat 312  Q
    | |  |||||||||| |||||| |||||||| || ||  || |||||| ||||| |||||||||||||||  | |||| ||| |||||||  ||||||||    
T  2848 tca--tttagtgtaatttttcatttgttgtaagattagatgattaattcagtaagtgattaattgttcatagttgttaaaattcgtgctctaattatgat 2751  T
Q  313 tttatgtttg 322  Q
      ||||||||    
T  2750 gatatgtttg 2741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 74; Significance: 6e-34; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 142 - 282
Target Start/End: Original strand, 89717 - 89856
Alignment:
Q  142 ctaggagctaaagtgaagcttgagctaggaa-attgatctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgtt 240  Q
    |||||||||||| |||||| | ||||||| | ||| |||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||| ||    
T  89717 ctaggagctaaattgaagcctaagctagggagattaatctaactaaggtaagggggttagaattcatcataa-tctttttagtgt-aattttcaattatt 89814  T
Q  241 gtatgaataattgcttaattgagtaattgattaattgttcat 282  Q
    |||||||||| || |||||||  |||||||||||||||||||    
T  89815 gtatgaataagtgattaattggataattgattaattgttcat 89856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 93 - 322
Target Start/End: Original strand, 6826 - 7056
Alignment:
Q  93 aaaagggttatcgaaggaggaacttgaagattcaagaagagg-agagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaa 191  Q
    ||||||||||  |||| || | ||||||||||||||||  || ||||| |||||||| |||||||||||||| |||||||| | |   ||| ||||||||    
T  6826 aaaagggttagagaagaagaagcttgaagattcaagaattggtagagatcctaggagttaaagtgaagcttgggctaggaattggtgataattaaggtaa 6925  T
Q  192 gggggttagaattca-tcataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcatgatggtta 290  Q
    ||||||||||||||| | ||||| ||||| | ||||| |||||||| ||||||||||||| ||||||||||||||| |||||  |||||||| || || |    
T  6926 gggggttagaattcaattataatcattttaa-tgtaatttttcaatcgttgtatgaataagtgcttaattgagtaaatgatttgttgttcataattgtca 7024  T
Q  291 gaatccgtgctcctattatgattttatgtttg 322  Q
     ||| |||||||  ||||||||  ||||||||    
T  7025 aaattcgtgctctaattatgatgatatgtttg 7056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 71; Significance: 4e-32; HSPs: 5)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 88 - 282
Target Start/End: Complemental strand, 12139 - 11944
Alignment:
Q  88 agaggaaaagggttatcga-aggaggaacttgaagattcaagaagaggagagaacctaggagctaaagtgaagcttgagctaggaa-attgatctaacta 185  Q
    |||||||||||||||  || | |||||||||||||| ||||| |  |||||  | ||||||| |||| |||||| | ||||||| | ||| |||||||||    
T  12139 agaggaaaagggttagagagaagaggaacttgaagaatcaaggattggagaagagctaggagttaaattgaagcctaagctagggagattaatctaacta 12040  T
Q  186 aggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagt-aattgattaattgttcat 282  Q
    |||||||| ||||||||||||||||||| |||||| ||| ||  |||||||| |||||||||||| |||||||||| || ||||||||||||||||||    
T  12039 aggtaaggtggttagaattcatcataatcatttttggtgcaa--tttcaattattgtatgaataagtgcttaattgggtcaattgattaattgttcat 11944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 142 - 276
Target Start/End: Complemental strand, 16296 - 16162
Alignment:
Q  142 ctaggagctaaagtgaagcttgagctaggaa-attgatctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgtt 240  Q
    |||||||||||| |||||| | ||||||| | ||| ||||||||||||||||||||||||||||||||||||| |||||| ||| ||  |||||||| ||    
T  16296 ctaggagctaaattgaagcctaagctagggagattaatctaactaaggtaagggggttagaattcatcataatcatttttggtgcaa--tttcaattatt 16199  T
Q  241 gtatgaataattgcttaattgagt-aattgattaatt 276  Q
    ||||||| || |||||||||| || ||||||||||||    
T  16198 gtatgaacaagtgcttaattgggtgaattgattaatt 16162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 142 - 276
Target Start/End: Complemental strand, 25827 - 25693
Alignment:
Q  142 ctaggagctaaagtgaagcttgagctaggaa-attgatctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgtt 240  Q
    |||||||||||| |||||| | ||||||| | ||| ||||||||||||||||||||||||||||||||||||| |||||| ||| ||  |||||||| ||    
T  25827 ctaggagctaaattgaagcctaagctagggagattaatctaactaaggtaagggggttagaattcatcataatcatttttggtgcaa--tttcaattatt 25730  T
Q  241 gtatgaataattgcttaattgagt-aattgattaatt 276  Q
    ||||||| || |||||||||| || ||||||||||||    
T  25729 gtatgaacaagtgcttaattgggtgaattgattaatt 25693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 213
Target Start/End: Original strand, 132139 - 132173
Alignment:
Q  179 ctaactaaggtaagggggttagaattcatcataat 213  Q
    |||||||||||||||||||| ||||||||||||||    
T  132139 ctaactaaggtaagggggttggaattcatcataat 132173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 213
Target Start/End: Complemental strand, 88626 - 88598
Alignment:
Q  185 aaggtaagggggttagaattcatcataat 213  Q
    |||||||||||||||||||||||||||||    
T  88626 aaggtaagggggttagaattcatcataat 88598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 141 - 282
Target Start/End: Original strand, 76697 - 76838
Alignment:
Q  141 cctaggagctaaagtgaagcttgagctaggaaattgatc-taactaaggtaagggggttagaattca-tcataattatttttagtgtaaattttcaattg 238  Q
    ||||||||||||||||||||||| |||||||| ||| |  ||| ||||||||||||||||||||||| ||||||| ||||| ||||||| |||||||||     
T  76697 cctaggagctaaagtgaagcttgggctaggaa-ttgctgataattaaggtaagggggttagaattcaatcataatcatttt-agtgtaatttttcaatta 76794  T
Q  239 ttgtatgaataattgcttaattgagtaattgattaattgttcat 282  Q
    |||||||| ||| | ||||||||||||||||| |||||||||||    
T  76795 ttgtatgattaagtacttaattgagtaattgagtaattgttcat 76838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 142 - 282
Target Start/End: Original strand, 70158 - 70297
Alignment:
Q  142 ctaggagctaaagtgaagcttgagctaggaa-attgatctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgtt 240  Q
    |||||||| ||| |||||||| |||||||   ||| ||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||| ||    
T  70158 ctaggagcaaaaatgaagcttaagctagggggattaatctaactaaggtaagggggttagaattcatcataatcattttt-gtg-aaattttcaattatt 70255  T
Q  241 gtatgaataattgcttaattgagtaattgattaattgttcat 282  Q
    |||||||||| || |||| ||  |||||||||||||||||||    
T  70256 gtatgaataagtgattaaatgtataattgattaattgttcat 70297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 142 - 282
Target Start/End: Complemental strand, 11056 - 10918
Alignment:
Q  142 ctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgttg 241  Q
    |||||||| ||||||||||| |||||||   ||| ||||||||||||||||||||||||||||||||||||| | ||||||| | ||||||||||| |||    
T  11056 ctaggagcaaaagtgaagctagagctagaggattaatctaactaaggtaagggggttagaattcatcataatca-ttttagtat-aattttcaattattg 10959  T
Q  242 tatgaataattgcttaattgagtaattgattaattgttcat 282  Q
    ||||||||| || |||||||  ||| | |||||||||||||    
T  10958 tatgaataagtgattaattggataaataattaattgttcat 10918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 62; Significance: 9e-27; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 115 - 325
Target Start/End: Original strand, 22246 - 22456
Alignment:
Q  115 cttgaagattcaagaagagg-agagaacctaggagctaaagtgaagcttgagctagga--aattgatctaactaaggtaagggggttagaattca-tcat 210  Q
    ||||||||||||||||  || ||||| ||||||||||||||||||| ||| |||||||  || ||  |||||||||||||||||||||||||||| ||||    
T  22246 cttgaagattcaagaattggtagagatcctaggagctaaagtgaagtttgggctaggattaactg--ctaactaaggtaagggggttagaattcaatcat 22343  T
Q  211 aattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcatgatggttagaatccgtgctcctattatg 310  Q
    ||| ||||  ||||||| || ||| ||||||||| ||||| |||||||| || ||| ||| |||||||||||  | |||| ||| |||||||  | ||||    
T  22344 aatcattt--agtgtaatttctcatttgttgtattaataaatgcttaatagaataagtgaataattgttcatagttgttaaaattcgtgctctaaatatg 22441  T
Q  311 attttatgtttgtat 325  Q
    ||  |||||||||||    
T  22442 atgatatgtttgtat 22456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 59; Significance: 6e-25; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 115 - 282
Target Start/End: Original strand, 97023 - 97189
Alignment:
Q  115 cttgaagattcaagaagagg-agagaacctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattca-tcataa 212  Q
    ||||||||||||||||  || ||||| | |||||| |||||||||||||| |||||||| |||  ||||  |||||||||||||||||||||| ||||||    
T  97023 cttgaagattcaagaaatggtagagatcgtaggaggtaaagtgaagcttgggctaggaa-ttgtgctaatgaaggtaagggggttagaattcaatcataa 97121  T
Q  213 ttatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcat 282  Q
    | ||||  ||||||| ||||||||| |||||||| | | || |||||||||| | |||||||||||||||    
T  97122 tcattt--agtgtaatttttcaattattgtatgatttagtgtttaattgagtgagtgattaattgttcat 97189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 142 - 261
Target Start/End: Complemental strand, 71007 - 70891
Alignment:
Q  142 ctaggagctaaagtgaagcttgagctaggaa-attgatctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgtt 240  Q
    |||||||| ||| |||||| | ||||||| | ||| ||||||||||||||||||||||||||||||||||||| |||| | ||   |||||||| || ||    
T  71007 ctaggagcaaaattgaagcctaagctagggagattaatctaactaaggtaagggggttagaattcatcataatcatttattgt---aattttcagttatt 70911  T
Q  241 gtatgaataattgcttaattg 261  Q
    ||||||| || ||||||||||    
T  70910 gtatgaa-aagtgcttaattg 70891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1295 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold1295
Description:

Target: scaffold1295; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 142 - 273
Target Start/End: Complemental strand, 500 - 372
Alignment:
Q  142 ctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgttg 241  Q
    ||||||||||||||||||||||||||||||| | |   ||||| ||||||||||||||||||||||  |||| |  |||||||| | |||||| ||||||    
T  500 ctaggagctaaagtgaagcttgagctaggaattggtgataactgaggtaagggggttagaattcattgtaatca--tttagtgt-agttttcatttgttg 404  T
Q  242 tatgaataattgcttaattgagtaattgatta 273  Q
    ||||||||| ||||||||||| ||| ||||||    
T  403 tatgaataagtgcttaattgaataagtgatta 372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 142 - 273
Target Start/End: Original strand, 1362 - 1490
Alignment:
Q  142 ctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgttg 241  Q
    |||||| |||||||||||||||||||||||| | |   ||| | |||||||||||||||||||||||||||| |  |||||||| | |||||| ||||||    
T  1362 ctaggaactaaagtgaagcttgagctaggaattggtgataattgaggtaagggggttagaattcatcataatca--tttagtgt-agttttcatttgttg 1458  T
Q  242 tatgaataattgcttaattgagtaattgatta 273  Q
    ||||||||| ||||||||||| ||| ||||||    
T  1459 tatgaataagtgcttaattgaataaatgatta 1490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 57; Significance: 9e-24; HSPs: 2)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 109 - 282
Target Start/End: Original strand, 8701 - 8873
Alignment:
Q  109 gaggaacttgaagattcaagaagaggagagaacctaggagctaaagtgaagcttgagctaggaa-attgatctaactaaggtaagggggttagaattcat 207  Q
    |||||||||||||| ||||||   | ||||| | ||||||  ||| |||||| | ||||||| | ||| ||||||||||||||||||||||||| |||||    
T  8701 gaggaacttgaagaatcaagattggaagagagc-taggagaaaaaatgaagcctaagctagggagattaatctaactaaggtaagggggttagagttcat 8799  T
Q  208 cataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgag-taattgattaattgttcat 282  Q
    |||||| |||||| ||| ||  |||||||| |||||||||||| |||||||||| |  ||||||||||||||||||    
T  8800 cataatcatttttggtgcaa--tttcaattattgtatgaataagtgcttaattgggaaaattgattaattgttcat 8873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 213
Target Start/End: Original strand, 5101 - 5172
Alignment:
Q  142 ctaggagctaaagtgaagcttgagctaggaa-attgatctaactaaggtaagggggttagaattcatcataat 213  Q
    |||||||| ||| |||||| | ||||||| | ||| ||||| |||||||||||||||||||||||||||||||    
T  5101 ctaggagcaaaattgaagcctaagctagggagattaatcta-ctaaggtaagggggttagaattcatcataat 5172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 81 - 282
Target Start/End: Complemental strand, 79995 - 79795
Alignment:
Q  81 ggagcagagaggaaaagggttatcgaaggaggaacttgaagattcaagaa---gaggagagaacctaggagctaaagtgaagcttgagcta-ggaaattg 176  Q
    |||||| |||||||||||||||  |||||||||||||||||||||||| |   |||| | |  | |||||| |||||||||| ||| | || ||  | |     
T  79995 ggagcaaagaggaaaagggttagagaaggaggaacttgaagattcaaggattagagggggg--cttaggagttaaagtgaagtttgggttaaggttaatt 79898  T
Q  177 atctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaatt 276  Q
    | ||| ||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||| |||||||||||| || |||||||  ||| |||||||||    
T  79897 a-ctatctaaggtaagggg-ttagaattcatcataattatttt-agtgtaatttttcaattattgtatgaataagtgattaattggataaatgattaatt 79801  T
Q  277 gttcat 282  Q
    ||||||    
T  79800 gttcat 79795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 184 - 282
Target Start/End: Complemental strand, 53699 - 53602
Alignment:
Q  184 taaggtaagggggttagaattca-tcataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcat 282  Q
    ||||||||||||||||||||||| ||||||| ||||  ||||||| ||||||||| |||||||| ||| ||||||||||||||| |||||||||||||||    
T  53699 taaggtaagggggttagaattcaatcataatcattt--agtgtaatttttcaattattgtatgattaagtgcttaattgagtaagtgattaattgttcat 53602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 179 - 282
Target Start/End: Original strand, 5567 - 5669
Alignment:
Q  179 ctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgt 278  Q
    ||||||||| ||||||||||| ||||||| ||||| ||||| ||||||| ||||||||| || ||||||||| ||||||||||| ||| |||||||||||    
T  5567 ctaactaagataagggggttataattcatgataatcatttt-agtgtaatttttcaattattatatgaataagtgcttaattgaataagtgattaattgt 5665  T
Q  279 tcat 282  Q
    ||||    
T  5666 tcat 5669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 183 - 282
Target Start/End: Complemental strand, 8364 - 8266
Alignment:
Q  183 ctaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagtaattgattaattgttcat 282  Q
    ||||||||||||||||||||||||||||||| ||||| | ||||| ||||||||| |||||||||||| || |||||||  ||| |||||||||||||||    
T  8364 ctaaggtaagggggttagaattcatcataatcattttaa-tgtaatttttcaattattgtatgaataagtgattaattggataaatgattaattgttcat 8266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 261
Target Start/End: Complemental strand, 11230 - 11153
Alignment:
Q  183 ctaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattg 261  Q
    |||||||||||||||||||| |||||||||| | ||||| ||||| ||||||||| |||||||||||| || |||||||    
T  11230 ctaaggtaagggggttagaagtcatcataatca-ttttaatgtaatttttcaattattgtatgaataagtgattaattg 11153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0554 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0554
Description:

Target: scaffold0554; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 142 - 282
Target Start/End: Complemental strand, 2310 - 2172
Alignment:
Q  142 ctaggagctaaagtgaagcttgagctaggaa-attgatctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgtt 240  Q
    |||||||||||| |||||| | ||||||| | ||| |||||||||| |||||||||||||||||||||||||| |   ||| || || ||||||||| ||    
T  2310 ctaggagctaaattgaagcctaagctagggagattaatctaactaaagtaagggggttagaattcatcataatca---ttattgcaatttttcaattatt 2214  T
Q  241 gtatgaataattgcttaattgagt-aattgattaattgttcat 282  Q
    ||||||| || |||||||||| || ||||||||||||| ||||    
T  2213 gtatgaa-aagtgcttaattgggtgaattgattaattgctcat 2172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 177 - 282
Target Start/End: Original strand, 464 - 567
Alignment:
Q  177 atctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagt-aattgattaat 275  Q
    |||||||||||||||||||||||||||||||||| || |  |||| ||  | ||||||||| |||||||||||| |||||||||| || |||||||||||    
T  464 atctaactaaggtaagggggttagaattcatcat-atca--tttattgctatttttcaattattgtatgaataagtgcttaattgggtgaattgattaat 560  T
Q  276 tgttcat 282  Q
    |||||||    
T  561 tgttcat 567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 142 - 280
Target Start/End: Complemental strand, 34057 - 33920
Alignment:
Q  142 ctaggagctaaagtgaagcttgagctaggaa-attgatctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgtt 240  Q
    |||||||||||| |||||| | ||||||| | ||| ||||||||||||||||||| ||||||||||||||||| |||| | |    |||||||||||  |    
T  34057 ctaggagctaaattgaagcctaagctagggagattaatctaactaaggtaaggggattagaattcatcataatcatttattg---caattttcaattact 33961  T
Q  241 gtatgaataattgcttaatt-gagtaattgattaattgttc 280  Q
    |||||| ||| ||||||||| ||  ||||||||||||||||    
T  33960 gtatgattaagtgcttaattggatgaattgattaattgttc 33920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 145 - 282
Target Start/End: Complemental strand, 159691 - 159556
Alignment:
Q  145 ggagctaaagtgaagcttgagctaggaa-attgatctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgttgta 243  Q
    ||||| ||| |||||| | ||||||| | ||| ||||||||||||||||||||||||||||||||||||| |   ||| || || ||||||||| |||||    
T  159691 ggagcaaaattgaagcctaagctagggagattaatctaactaaggtaagggggttagaattcatcataatca---ttattgcaatttttcaattattgta 159595  T
Q  244 tgaataattgcttaattgagt-aattgattaattgttcat 282  Q
     ||| || |||||||||| || ||||||||||||||||||    
T  159594 cgaa-aagtgcttaattgggtgaattgattaattgttcat 159556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 112 - 279
Target Start/End: Complemental strand, 85755 - 85591
Alignment:
Q  112 gaacttgaagattcaagaagaggagagaacctaggagctaaagtgaagcttgagctaggaa-attgatctaactaaggtaagggggttagaattcatcat 210  Q
    ||||||||||| ||||| || ||||| || | |||||| ||| |||||  | ||||||| | ||| |||| |||||||||||||||||||||||||||||    
T  85755 gaacttgaagaatcaaggagtggaga-aagcaaggagcaaaattgaagtctaagctagggagattaatcttactaaggtaagggggttagaattcatcat 85657  T
Q  211 aattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagt-aattgattaattgtt 279  Q
    ||| |   ||| || || ||||||||| ||||||||| || |||||||||| || |||||||||||||||    
T  85656 aatca---ttattgcaatttttcaattattgtatgaa-aagtgcttaattgggtgaattgattaattgtt 85591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 45; Significance: 1e-16; HSPs: 3)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 142 - 282
Target Start/End: Complemental strand, 31604 - 31466
Alignment:
Q  142 ctaggagctaaagtgaagcttgagctag-gaaattgatctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgtt 240  Q
    |||||||| ||| |||||| | |||||| || ||| | ||||||||||||||||||||||||||||||||||| |   ||| || || ||||||||| ||    
T  31604 ctaggagcaaaattgaagcctaagctagagagattaacctaactaaggtaagggggttagaattcatcataatca---ttattgcaatttttcaattatt 31508  T
Q  241 gtatgaataattgcttaattgag-taattgattaattgttcat 282  Q
    ||||||| || |||||||||| |  ||||||||||||||||||    
T  31507 gtatgaa-aagtgcttaattgggcgaattgattaattgttcat 31466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 142 - 282
Target Start/End: Original strand, 47402 - 47540
Alignment:
Q  142 ctaggagctaaagtgaagcttgagctag-gaaattgatctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgtt 240  Q
    |||||||| ||| |||||| | |||||| || ||| | ||||||||||||||||||||||||||||||||||| |   ||| || || ||||||||| ||    
T  47402 ctaggagcaaaattgaagcctaagctagagagattaacctaactaaggtaagggggttagaattcatcataatca---ttattgcaatttttcaattatt 47498  T
Q  241 gtatgaataattgcttaattgag-taattgattaattgttcat 282  Q
    ||||||| || |||||||||| |  ||||||||||||||||||    
T  47499 gtatgaa-aagtgcttaattgggcgaattgattaattgttcat 47540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 282
Target Start/End: Complemental strand, 21867 - 21767
Alignment:
Q  179 ctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgag-taattgattaattg 277  Q
    ||||||||||||||||||||| ||||||||||||| |   ||| || || ||||||||| ||||||||| ||  ||||||||| |  |||||||||||||    
T  21867 ctaactaaggtaagggggttataattcatcataatca---ttattgcaatttttcaattattgtatgaa-aaaggcttaattgggcgaattgattaattg 21772  T
Q  278 ttcat 282  Q
    |||||    
T  21771 ttcat 21767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 143 - 282
Target Start/End: Complemental strand, 61201 - 61062
Alignment:
Q  143 taggagctaaagtgaagcttgagctag-gaaattgatctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaatt-gtt 240  Q
    ||||||| ||| |||||||| |||||| |||||| |  |||||||||||||||||||||||||||||||||| |   ||| || || |||||||||  ||    
T  61201 taggagcaaaattgaagcttaagctagagaaattaacttaactaaggtaagggggttagaattcatcataatca--cttattgcaatttttcaattattt 61104  T
Q  241 gtatgaataattgcttaattgagt-aattgattaattgttcat 282  Q
    ||||||| || |||||||||| || ||||||||||||||||||    
T  61103 gtatgaa-aagtgcttaattgggtgaattgattaattgttcat 61062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 168 - 282
Target Start/End: Complemental strand, 10305 - 10193
Alignment:
Q  168 aggaaattgatctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaatt-gttgtatgaataattgcttaattgagt-a 265  Q
    |||| ||| ||||||||||||||||||||||||||||||| ||||| |   ||| || ||||||||||||  ||||||||| || |||||||||| || |    
T  10305 aggagattaatctaactaaggtaagggggttagaattcataataatca---ttattgcaaattttcaattctttgtatgaa-aagtgcttaattgggtga 10210  T
Q  266 attgattaattgttcat 282  Q
    |||||||||||||||||    
T  10209 attgattaattgttcat 10193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 111 - 213
Target Start/End: Complemental strand, 12695 - 12592
Alignment:
Q  111 ggaacttgaagattcaagaagaggagaga-acctaggagctaaagtgaagcttgagctaggaa-attgatctaactaaggtaagggggttagaattcatc 208  Q
    |||||||||||| ||||| || ||| ||| |||||||||  ||| |||||| | ||||||| | ||| ||||||||||||||||||||||||||||||||    
T  12695 ggaacttgaagaatcaaggagtgga-agagacctaggagaaaaattgaagcctaagctagggagattaatctaactaaggtaagggggttagaattcatc 12597  T
Q  209 ataat 213  Q
    |||||    
T  12596 ataat 12592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 109 - 282
Target Start/End: Complemental strand, 9415 - 9243
Alignment:
Q  109 gaggaacttgaagattcaagaagaggagagaacctaggagctaaagtgaagcttgagctaggaa-attgatctaactaaggtaagggggttagaattcat 207  Q
    |||||||||||||| |||||||  || |   | |||||||| ||| |||||  | ||||||| | ||| |||||||||||||||||||||||||||| ||    
T  9415 gaggaacttgaagaatcaagaattggggttgagctaggagcaaaattgaagtctaagctagggagattaatctaactaaggtaagggggttagaatttat 9316  T
Q  208 cataattatttttagtgtaa-attttcaattgttgtatgaataattgcttaattgagt-aattgattaattgttcat 282  Q
    |||||| |   ||| || ||  ||||||||| ||||||||| || ||||||||||||| |||||||||||| |||||    
T  9315 cataatca---ttattgcaattttttcaattattgtatgaa-aagtgcttaattgagtgaattgattaatttttcat 9243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 179 - 282
Target Start/End: Complemental strand, 41015 - 40915
Alignment:
Q  179 ctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgttgtatgaataattgcttaattgagt-aattgattaattg 277  Q
    ||||||||||||||||||||| ||||||||||||| |||| | |    |||||| |||| |||||||||| | |||||||||| || |||||||||||||    
T  41015 ctaactaaggtaagggggttataattcatcataatcatttattg---caatttttaattattgtatgaat-agtgcttaattgggtgaattgattaattg 40920  T
Q  278 ttcat 282  Q
    |||||    
T  40919 ttcat 40915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0673 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0673
Description:

Target: scaffold0673; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 182 - 282
Target Start/End: Original strand, 715 - 813
Alignment:
Q  182 actaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaatt-gttgtatgaataattgcttaattgagt-aattgattaattgtt 279  Q
    |||||||||||||||||||||||||||||||| | || | ||   |||||||||||  ||||||| |||| ||||||||||||| |||||||| ||||||    
T  715 actaaggtaagggggttagaattcatcataatcacttattgt---aattttcaattatttgtatg-ataagtgcttaattgagtgaattgattgattgtt 810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 182 - 282
Target Start/End: Complemental strand, 7924 - 7826
Alignment:
Q  182 actaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaatt-gttgtatgaataattgcttaatt-gagtaattgattaattgtt 279  Q
    |||||||||||||||||||||||||||||||||| || | ||   |||||||||||  ||||||||| || ||||||||| ||  |||||||||||||||    
T  7924 actaaggtaagggggttagaattcatcataattacttattgt---aattttcaattatttgtatgaa-aagtgcttaattggatgaattgattaattgtt 7829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 142 - 213
Target Start/End: Complemental strand, 38693 - 38621
Alignment:
Q  142 ctaggagctaaagtgaagcttgagctag-gaaattgatctaactaaggtaagggggttagaattcatcataat 213  Q
    |||||||| ||| |||||| | |||||| || ||| | |||||||||||||||||||||||||||||||||||    
T  38693 ctaggagcaaaattgaagcctaagctagagagattaacctaactaaggtaagggggttagaattcatcataat 38621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 142 - 213
Target Start/End: Original strand, 24580 - 24652
Alignment:
Q  142 ctaggagctaaagtgaagcttgagctag-gaaattgatctaactaaggtaagggggttagaattcatcataat 213  Q
    |||||||| ||| |||||| | |||||| || ||| | |||||||||||||||||||||||||||||||||||    
T  24580 ctaggagcaaaattgaagcataagctagagagattaacctaactaaggtaagggggttagaattcatcataat 24652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 177 - 213
Target Start/End: Original strand, 109349 - 109385
Alignment:
Q  177 atctaactaaggtaagggggttagaattcatcataat 213  Q
    |||||||||||||||||||||||||||||||||||||    
T  109349 atctaactaaggtaagggggttagaattcatcataat 109385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 177 - 213
Target Start/End: Original strand, 117850 - 117886
Alignment:
Q  177 atctaactaaggtaagggggttagaattcatcataat 213  Q
    |||||||||||||||||||||||||||||||||||||    
T  117850 atctaactaaggtaagggggttagaattcatcataat 117886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 213
Target Start/End: Complemental strand, 23048 - 23014
Alignment:
Q  179 ctaactaaggtaagggggttagaattcatcataat 213  Q
    |||||||||||||||||||||||||||||||||||    
T  23048 ctaactaaggtaagggggttagaattcatcataat 23014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 177 - 282
Target Start/End: Original strand, 11596 - 11699
Alignment:
Q  177 atctaactaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaatt-gttgtatgaataattgcttaatt-gagtaattgattaa 274  Q
    ||||||||||| ||||||||||||||||||||||||| | || | ||   |||||||||||  ||||||| |||| ||||||||| ||  ||||||||||    
T  11596 atctaactaagctaagggggttagaattcatcataatcacttattgt---aattttcaattatttgtatg-ataagtgcttaattggatgaattgattaa 11691  T
Q  275 ttgttcat 282  Q
    ||||||||    
T  11692 ttgttcat 11699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0816 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0816
Description:

Target: scaffold0816; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 282
Target Start/End: Original strand, 2959 - 3056
Alignment:
Q  182 actaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaatt-gttgtatgaataattgcttaatt-gagtaattgattaattgtt 279  Q
    |||||||||||||||||||||||||||||||| | |||| ||   |||||||||||  ||||||| |||| ||||||||| ||  |||||||||||||||    
T  2959 actaaggtaagggggttagaattcatcataatcactttt-gt---aattttcaattatttgtatg-ataaatgcttaattggatgaattgattaattgtt 3053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0740 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0740
Description:

Target: scaffold0740; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 213
Target Start/End: Complemental strand, 4677 - 4606
Alignment:
Q  142 ctaggagctaaagtgaagcttgagctaggaa-attgatctaactaaggtaagggggttagaattcatcataat 213  Q
    |||||||| ||| |||||| | ||||||| | ||| ||||| |||||||||||||||||||||||||||||||    
T  4677 ctaggagcaaaattgaagcctaagctagggagattaatcta-ctaaggtaagggggttagaattcatcataat 4606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 206
Target Start/End: Complemental strand, 3647 - 3584
Alignment:
Q  142 ctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattca 206  Q
    ||||||| |||||||||||||| |||||| | |||| |||| ||||| |||||||||||||||||    
T  3647 ctaggagttaaagtgaagcttgggctagg-atttgagctaattaaggcaagggggttagaattca 3584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 213
Target Start/End: Complemental strand, 1710 - 1638
Alignment:
Q  142 ctaggagctaaagtgaagcttgagctag-gaaattgatctaactaaggtaagggggttagaattcatcataat 213  Q
    |||||||| ||| |||||| | |||||| || ||| | |||||||||| ||||||||||||||||||||||||    
T  1710 ctaggagcaaaattgaagcctaagctagagagattaacctaactaaggcaagggggttagaattcatcataat 1638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 282
Target Start/End: Original strand, 11546 - 11644
Alignment:
Q  182 actaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaatt-gttgtatgaataattgcttaatt-gagtaattgattaattgtt 279  Q
    |||||||||||||||||||||||||||||||| | || | ||   |||||||||||  ||||||||| || ||||||||| ||  |||||||||||||||    
T  11546 actaaggtaagggggttagaattcatcataatcacttattgt---aattttcaattatttgtatgaa-aagtgcttaattggatgaattgattaattgtt 11641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 213
Target Start/End: Original strand, 11421 - 11493
Alignment:
Q  142 ctaggagctaaagtgaagcttgagctag-gaaattgatctaactaaggtaagggggttagaattcatcataat 213  Q
    |||||||| ||| |||||| | |||||| || ||| | |||||||||||| ||||||||||||||||||||||    
T  11421 ctaggagcaaaattgaagcctaagctagagagattaacctaactaaggtatgggggttagaattcatcataat 11493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 282
Target Start/End: Complemental strand, 15226 - 15129
Alignment:
Q  182 actaaggtaagggggttagaattcatcataattatttttagtgtaaattttcaattgt-tgtatgaataattgcttaatt-gagtaattgattaattgtt 279  Q
    |||||||||||||||||||||||||||||||| | |||| ||   ||||||||||| | |||||| |||| ||||||||| ||  |||||||||||||||    
T  15226 actaaggtaagggggttagaattcatcataatcactttt-gt---aattttcaattatatgtatg-ataagtgcttaattggatgaattgattaattgtt 15132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 213
Target Start/End: Complemental strand, 4915 - 4884
Alignment:
Q  182 actaaggtaagggggttagaattcatcataat 213  Q
    ||||||||||||||||||||||||||||||||    
T  4915 actaaggtaagggggttagaattcatcataat 4884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 213
Target Start/End: Complemental strand, 9529 - 9498
Alignment:
Q  182 actaaggtaagggggttagaattcatcataat 213  Q
    ||||||||||||||||||||||||||||||||    
T  9529 actaaggtaagggggttagaattcatcataat 9498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 213
Target Start/End: Complemental strand, 7524 - 7493
Alignment:
Q  182 actaaggtaagggggttagaattcatcataat 213  Q
    ||||||||||||||||||||||||||||||||    
T  7524 actaaggtaagggggttagaattcatcataat 7493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 213
Target Start/End: Complemental strand, 8701 - 8670
Alignment:
Q  182 actaaggtaagggggttagaattcatcataat 213  Q
    ||||||||||||||||||||||||||||||||    
T  8701 actaaggtaagggggttagaattcatcataat 8670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0808 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0808
Description:

Target: scaffold0808; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 142 - 184
Target Start/End: Original strand, 1974 - 2016
Alignment:
Q  142 ctaggagctaaagtgaagcttgagctaggaaattgatctaact 184  Q
    |||||||||||| |||||||||||||||| |||| ||||||||    
T  1974 ctaggagctaaattgaagcttgagctagggaattaatctaact 2016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1932 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1932
Description:

Target: scaffold1932; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 122
Target Start/End: Original strand, 1188 - 1229
Alignment:
Q  81 ggagcagagaggaaaagggttatcgaaggaggaacttgaaga 122  Q
    |||||| |||||||||||||||  ||||||||||||||||||    
T  1188 ggagcaaagaggaaaagggttacagaaggaggaacttgaaga 1229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 175
Target Start/End: Complemental strand, 6063 - 6030
Alignment:
Q  142 ctaggagctaaagtgaagcttgagctaggaaatt 175  Q
    ||||||||||||||||||||||||||||| ||||    
T  6063 ctaggagctaaagtgaagcttgagctagggaatt 6030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 218
Target Start/End: Complemental strand, 4999 - 4923
Alignment:
Q  142 ctaggagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattc-atcataattattt 218  Q
    |||||| ||||| ||||||||| |||||||  |||  |||| |||||||||||||||||||||| |||||||| ||||    
T  4999 ctaggatctaaattgaagcttgggctaggat-ttgtgctaattaaggtaagggggttagaattcaatcataatcattt 4923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 206
Target Start/End: Original strand, 818 - 877
Alignment:
Q  146 gagctaaagtgaagcttgagctaggaaattgatctaactaaggtaagggggttagaattca 206  Q
    |||||||| ||||||||| |||||||  ||  |||||||||||||||||||||||| ||||    
T  818 gagctaaattgaagcttgggctaggattttt-tctaactaaggtaagggggttagatttca 877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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