View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2351_low_15 (Length: 321)
Name: NF2351_low_15
Description: NF2351
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2351_low_15 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 86 - 321
Target Start/End: Original strand, 12556242 - 12556477
Alignment:
| Q |
86 |
agaatccgacattaattccactcatttcattccgaatcaatcaacagagattaattatataaaaaggagtgaactacatgcaagggaagataaacaaaca |
185 |
Q |
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| T |
12556242 |
agaatccgacattaattccactcatttcattccgaatcaatcaacagagattaattatatcaaaaggagtgaactacatgcaagggaagataaacgaaca |
12556341 |
T |
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| Q |
186 |
caagaaattagagaaatcacaaacaacaaacattaataagatccactaaatacgatgattacattagggtattcgattcacttacctgagtaaaagagaa |
285 |
Q |
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| T |
12556342 |
caagaaattagagaaatcacaaacaacaaacattaataagatccactaaatacgatgattacattagggtattcgattcacttacctgagtaaaagagaa |
12556441 |
T |
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| Q |
286 |
acggccgaacaaatgaaggcgtagggtttgcgacgt |
321 |
Q |
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| T |
12556442 |
acggccgaacaaatgaaggcgtagggtttgcgacgt |
12556477 |
T |
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