View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2351_low_31 (Length: 251)
Name: NF2351_low_31
Description: NF2351
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2351_low_31 |
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Alignment Details
Target: chr6 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 31 - 238
Target Start/End: Complemental strand, 2547034 - 2546827
Alignment:
| Q |
31 |
tttctcattggtagaaatgtatcccaaaatcattctcacgaggaaacaatctatgttggacaatccttaaataaagagaagaccaagatggagatgatgt |
130 |
Q |
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| T |
2547034 |
tttctcattggtagaaatgtatcccaaaatcattctcacgaggaaacaatctatgttggacaatccttaaataaagggaagaccaagatggagatgatgt |
2546935 |
T |
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| Q |
131 |
ttgttgaataaacattttaaagcatgtgtagatacgttaagtttaagttgatacattttagtatgatgttttttatgtgtttgtattgcggaaattatat |
230 |
Q |
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|||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
2546934 |
ttgttgaataaacattttaaagcatgtgtagatacgttaattttaagttgatacgttttactatgatgttttttatgtgtttgtattgcggaaattatat |
2546835 |
T |
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| Q |
231 |
aagatatt |
238 |
Q |
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|||||||| |
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| T |
2546834 |
aagatatt |
2546827 |
T |
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