View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2352_high_4 (Length: 227)
Name: NF2352_high_4
Description: NF2352
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2352_high_4 |
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Alignment Details
Target: chr8 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 44298542 - 44298748
Alignment:
| Q |
1 |
tcattgtcgatttcatcttcgttccataatcagcctgtcacattaatggaataatttgctcatattgtaaattcttcaatgaaattaaatggaattaata |
100 |
Q |
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| T |
44298542 |
tcattgtcgatttcatcttcgttccataatcagcctgtcacattaatggaataatttgctcatattgtaaattcttcaatgaaattaaatggaat----a |
44298637 |
T |
|
| Q |
101 |
atcattacctgaagtatgcaaccacccaaacccattccttcaaagagttgatggaagcaaagtgcagcaatgagaggccttatggtgcaatggttctctg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44298638 |
atcattacctgaagtatgcaaccacccaaacccattccttcaaagagttgatggaagcaaagtgcagcaatgagaggccttatggtgcaatggttctctg |
44298737 |
T |
|
| Q |
201 |
aagcacccaat |
211 |
Q |
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||||||||||| |
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| T |
44298738 |
aagcacccaat |
44298748 |
T |
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