View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2353_low_1 (Length: 356)

Name: NF2353_low_1
Description: NF2353
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2353_low_1
NF2353_low_1
[»] chr6 (15 HSPs)
chr6 (8-337)||(17690421-17690750)
chr6 (13-331)||(27297561-27297879)
chr6 (8-337)||(29309787-29310116)
chr6 (8-337)||(29316746-29317075)
chr6 (8-337)||(27380208-27380537)
chr6 (8-337)||(27470591-27470920)
chr6 (13-337)||(17683438-17683763)
chr6 (8-337)||(11652595-11652924)
chr6 (151-331)||(27278407-27278587)
chr6 (151-331)||(27303298-27303478)
chr6 (13-190)||(25536292-25536469)
chr6 (69-337)||(18336550-18336815)
chr6 (186-331)||(28755244-28755386)
chr6 (30-235)||(16393546-16393743)
chr6 (13-73)||(16558717-16558777)
[»] chr1 (12 HSPs)
chr1 (8-337)||(18252927-18253256)
chr1 (8-337)||(18531494-18531824)
chr1 (13-337)||(27309534-27309857)
chr1 (13-337)||(9075858-9076182)
chr1 (8-337)||(27130378-27130694)
chr1 (19-337)||(16358014-16358334)
chr1 (227-338)||(21169389-21169500)
chr1 (30-336)||(22640833-22641135)
chr1 (34-168)||(36815747-36815882)
chr1 (131-164)||(27276691-27276724)
chr1 (70-110)||(23509839-23509879)
chr1 (70-107)||(25662053-25662090)
[»] scaffold0061 (1 HSPs)
scaffold0061 (8-337)||(5177-5506)
[»] chr4 (30 HSPs)
chr4 (8-337)||(8859089-8859418)
chr4 (8-337)||(18269970-18270299)
chr4 (8-337)||(19919487-19919816)
chr4 (8-337)||(19925716-19926045)
chr4 (20-337)||(26971374-26971691)
chr4 (8-337)||(869518-869847)
chr4 (8-337)||(18263109-18263438)
chr4 (18-337)||(55613616-55613934)
chr4 (8-337)||(28392123-28392452)
chr4 (8-337)||(5714869-5715199)
chr4 (8-337)||(5708234-5708563)
chr4 (13-336)||(4425597-4425920)
chr4 (8-338)||(10627370-10627700)
chr4 (8-337)||(10620289-10620618)
chr4 (130-337)||(26964590-26964797)
chr4 (34-320)||(47387928-47388215)
chr4 (8-190)||(8846100-8846282)
chr4 (33-188)||(5667198-5667354)
chr4 (173-337)||(10676545-10676709)
chr4 (173-337)||(10890185-10890349)
chr4 (13-337)||(35224458-35224778)
chr4 (242-337)||(20579393-20579488)
chr4 (254-337)||(10825308-10825391)
chr4 (173-240)||(10690356-10690423)
chr4 (173-240)||(10903996-10904063)
chr4 (295-337)||(5667150-5667192)
chr4 (45-112)||(10676753-10676821)
chr4 (45-112)||(10890393-10890461)
chr4 (48-112)||(10690247-10690312)
chr4 (48-112)||(10903887-10903952)
[»] chr3 (29 HSPs)
chr3 (13-337)||(10578313-10578637)
chr3 (8-337)||(15341200-15341529)
chr3 (13-337)||(10571547-10571871)
chr3 (8-337)||(15356567-15356896)
chr3 (8-337)||(15599865-15600194)
chr3 (8-337)||(15606410-15606739)
chr3 (18-337)||(16481439-16481757)
chr3 (13-337)||(6110991-6111326)
chr3 (13-337)||(13517711-13518035)
chr3 (13-337)||(18537897-18538221)
chr3 (8-331)||(1646483-1646806)
chr3 (8-316)||(17196750-17197058)
chr3 (8-307)||(32056056-32056355)
chr3 (142-337)||(13212331-13212526)
chr3 (155-337)||(8491428-8491610)
chr3 (8-193)||(17780243-17780428)
chr3 (8-193)||(19081544-19081729)
chr3 (8-237)||(17137275-17137505)
chr3 (8-337)||(23014324-23014653)
chr3 (30-331)||(16201136-16201439)
chr3 (227-337)||(13258661-13258771)
chr3 (235-337)||(17780144-17780246)
chr3 (235-337)||(19081445-19081547)
chr3 (8-113)||(13212225-13212330)
chr3 (160-337)||(25801243-25801419)
chr3 (222-287)||(54333199-54333264)
chr3 (300-337)||(13691871-13691908)
chr3 (300-337)||(18534826-18534863)
chr3 (300-337)||(32055396-32055433)
[»] chr8 (11 HSPs)
chr8 (8-337)||(22172382-22172711)
chr8 (8-337)||(6095043-6095372)
chr8 (8-337)||(21941562-21941893)
chr8 (8-337)||(15327120-15327449)
chr8 (8-337)||(15507489-15507818)
chr8 (8-337)||(28548944-28549260)
chr8 (155-337)||(24643993-24644174)
chr8 (30-266)||(29230335-29230568)
chr8 (130-337)||(24795968-24796170)
chr8 (30-112)||(24643541-24643624)
chr8 (77-110)||(32872123-32872156)
[»] scaffold0433 (1 HSPs)
scaffold0433 (13-337)||(8010-8334)
[»] scaffold0390 (2 HSPs)
scaffold0390 (13-337)||(5890-6214)
scaffold0390 (13-337)||(12906-13230)
[»] scaffold0234 (2 HSPs)
scaffold0234 (8-337)||(10193-10522)
scaffold0234 (8-337)||(1300-1631)
[»] chr7 (14 HSPs)
chr7 (8-337)||(29328681-29329014)
chr7 (8-337)||(11535043-11535372)
chr7 (8-337)||(11541961-11542290)
chr7 (8-337)||(12751756-12752085)
chr7 (8-331)||(12739439-12739762)
chr7 (13-337)||(15153370-15153693)
chr7 (13-337)||(18561935-18562259)
chr7 (116-337)||(2652969-2653190)
chr7 (44-337)||(9978775-9979054)
chr7 (8-199)||(11557192-11557377)
chr7 (8-158)||(24850719-24850869)
chr7 (30-166)||(13393080-13393217)
chr7 (239-337)||(18256799-18256897)
chr7 (60-112)||(30926078-30926130)
[»] chr5 (8 HSPs)
chr5 (8-337)||(24694441-24694768)
chr5 (8-337)||(24701210-24701532)
chr5 (18-337)||(18565438-18565766)
chr5 (8-306)||(19713512-19713808)
chr5 (8-260)||(19706230-19706482)
chr5 (69-337)||(938531-938795)
chr5 (235-322)||(39539653-39539740)
chr5 (73-107)||(39539549-39539583)
[»] chr2 (7 HSPs)
chr2 (8-337)||(22790814-22791143)
chr2 (8-186)||(21329374-21329554)
chr2 (84-331)||(41664739-41664985)
chr2 (81-337)||(18620805-18621062)
chr2 (186-331)||(27353433-27353578)
chr2 (30-107)||(27353286-27353364)
chr2 (70-103)||(18822934-18822967)
[»] scaffold1199 (1 HSPs)
scaffold1199 (8-337)||(17-351)
[»] scaffold0220 (1 HSPs)
scaffold0220 (18-337)||(19219-19539)
[»] scaffold0063 (1 HSPs)
scaffold0063 (18-337)||(6429-6754)
[»] scaffold0008 (1 HSPs)
scaffold0008 (8-337)||(229368-229701)
[»] scaffold0213 (1 HSPs)
scaffold0213 (184-337)||(4313-4466)
[»] scaffold0032 (1 HSPs)
scaffold0032 (69-337)||(107228-107497)
[»] scaffold1303 (2 HSPs)
scaffold1303 (155-337)||(962-1143)
scaffold1303 (13-102)||(1180-1270)
[»] scaffold0026 (1 HSPs)
scaffold0026 (174-337)||(26276-26439)
[»] scaffold0203 (1 HSPs)
scaffold0203 (200-331)||(29171-29302)
[»] scaffold0502 (1 HSPs)
scaffold0502 (69-337)||(7-272)
[»] scaffold0657 (1 HSPs)
scaffold0657 (264-337)||(3870-3943)
[»] scaffold0039 (1 HSPs)
scaffold0039 (228-330)||(87829-87930)
[»] scaffold0705 (1 HSPs)
scaffold0705 (282-337)||(7620-7675)


Alignment Details
Target: chr6 (Bit Score: 306; Significance: 1e-172; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 8 - 337
Target Start/End: Complemental strand, 17690750 - 17690421
Alignment:
Q  8 cgaagaatatagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 107  Q
    |||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17690750 cgaaaaatagagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 17690651  T
Q  108 gcattactaactttttgcgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaa 207  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17690650 gcattactaactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaa 17690551  T
Q  208 ttggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaag 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  17690550 ttggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcagaaatatttcttctacaaag 17690451  T
Q  308 gttctgctcttcaagaggtaaacatatgaa 337  Q
    |||||||||||||||||||||||| |||||    
T  17690450 gttctgctcttcaagaggtaaacacatgaa 17690421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 13 - 331
Target Start/End: Original strand, 27297561 - 27297879
Alignment:
Q  13 aatatagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcatt 112  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27297561 aatagagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcatt 27297660  T
Q  113 actaactttttgcgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaattggc 212  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  27297661 actaactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaactttgttctctctgaatcttcgttggaattggc 27297760  T
Q  213 tagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaaggttct 312  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  27297761 tagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgattagaaatatttcttctacaaaggttct 27297860  T
Q  313 gctcttcaagaggtaaaca 331  Q
    |||||||||||||||||||    
T  27297861 gctcttcaagaggtaaaca 27297879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 290; E-Value: 1e-163
Query Start/End: Original strand, 8 - 337
Target Start/End: Original strand, 29309787 - 29310116
Alignment:
Q  8 cgaagaatatagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 107  Q
    |||| |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29309787 cgaaaaatagagaaatgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 29309886  T
Q  108 gcattactaactttttgcgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaa 207  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  29309887 gcattactaacttttggtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttatctctgaatctccgttggaa 29309986  T
Q  208 ttggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaag 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  29309987 ttggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatagctgctttgctttgctcgtgatcagaaatatttcttctacaaag 29310086  T
Q  308 gttctgctcttcaagaggtaaacatatgaa 337  Q
    |||||||||||||||||||||||| |||||    
T  29310087 gttctgctcttcaagaggtaaacacatgaa 29310116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 8 - 337
Target Start/End: Original strand, 29316746 - 29317075
Alignment:
Q  8 cgaagaatatagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 107  Q
    |||| |||| ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29316746 cgaaaaatagagaaatgcgattcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 29316845  T
Q  108 gcattactaactttttgcgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaa 207  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||    
T  29316846 gcattactaacttttggtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttatctctgaatctctgttggaa 29316945  T
Q  208 ttggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaag 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  29316946 ttggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatagctgctttgctttgctcgtgatcagaaatatttcttctacaaag 29317045  T
Q  308 gttctgctcttcaagaggtaaacatatgaa 337  Q
    |||||||||||||||||||||||| |||||    
T  29317046 gttctgctcttcaagaggtaaacacatgaa 29317075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 8 - 337
Target Start/End: Complemental strand, 27380537 - 27380208
Alignment:
Q  8 cgaagaatatagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 107  Q
    |||| |||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27380537 cgaaaaatagagaaacgcggtccaccgtaaagtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 27380438  T
Q  108 gcattactaactttttgcgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaa 207  Q
     ||||| |||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  27380437 acattattaacctttggtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatctccgttggaa 27380338  T
Q  208 ttggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaag 307  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  27380337 ttggctagcaccggtcatcagagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcagaaatatttcttctacaaag 27380238  T
Q  308 gttctgctcttcaagaggtaaacatatgaa 337  Q
    |||||||||||||||||||||||| |||||    
T  27380237 gttctgctcttcaagaggtaaacacatgaa 27380208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 8 - 337
Target Start/End: Complemental strand, 27470920 - 27470591
Alignment:
Q  8 cgaagaatatagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 107  Q
    |||| |||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27470920 cgaaaaatagagaaacgcggtccaccgtaaagtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 27470821  T
Q  108 gcattactaactttttgcgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaa 207  Q
     ||||| |||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  27470820 acattattaacctttggtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatctccgttggaa 27470721  T
Q  208 ttggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaag 307  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  27470720 ttggctagcaccggtcatcagagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcagaaatatttcttctacaaag 27470621  T
Q  308 gttctgctcttcaagaggtaaacatatgaa 337  Q
    |||||||||||||||||||||||| |||||    
T  27470620 gttctgctcttcaagaggtaaacacatgaa 27470591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 13 - 337
Target Start/End: Complemental strand, 17683763 - 17683438
Alignment:
Q  13 aatatagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcatt 112  Q
    |||| |||||||| || |||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  17683763 aatagagaaacgcagtccaccgtaaggtacgatgtatttaagtgttgtcttgctgaccacacaagtgattctataaatagaacccttgtgttgaagcatt 17683664  T
Q  113 actaac-tttttgcgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaattgg 211  Q
    |||||| |||||| ||||||||||| ||||||||||||||||||||||||||| | ||||||||||||| ||||||||| ||||||| ||||||||||||    
T  17683663 actaacctttttgtgagtgcttaacttaattcacaaaagttgtgaaaccctagtcaccgctctctaaacattgttctctttgaatctccgttggaattgg 17683564  T
Q  212 ctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaaggttc 311  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  17683563 ctagcaccggtcatcagagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcagaaatatttctgctacaaaggttc 17683464  T
Q  312 tgctcttcaagaggtaaacatatgaa 337  Q
    |||||||||||||||||||| |||||    
T  17683463 tgctcttcaagaggtaaacacatgaa 17683438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 8 - 337
Target Start/End: Original strand, 11652595 - 11652924
Alignment:
Q  8 cgaagaatatagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 107  Q
    |||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  11652595 cgaaaaatagagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgctgaccacacaagtgattctataaatagaacccttgtgttgaa 11652694  T
Q  108 gcattactaactttttgcgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaa 207  Q
    |||||||||| |||||| || |||| |||||||||||||||||||||||||||||||  ||||||||||||||||| |||| ||||||||| ||||||||    
T  11652695 gcattactaattttttgtgaatgctgaacctaattcacaaaagttgtgaaaccctagatgccgctctctaaaccttcttctttctgaatctccgttggaa 11652794  T
Q  208 ttggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaag 307  Q
    ||||||||||||||||||| ||||||| | ||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  11652795 ttggctagcaccggtcatcagagaagtacagtttgtgtggactgagtagaggcatcgctgctttgctttactcgtgatcagaaatatttcttctacaaag 11652894  T
Q  308 gttctgctcttcaagaggtaaacatatgaa 337  Q
    |||||||||||||||||||||||| |||||    
T  11652895 gttctgctcttcaagaggtaaacacatgaa 11652924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 151 - 331
Target Start/End: Original strand, 27278407 - 27278587
Alignment:
Q  151 ttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaattggctagcaccggtcatcggagaagttctgttcgtgtggact 250  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27278407 ttgtgaaaccctagccgccgctctctaaactttgttctctctgaatcttcgttggaattggctagcaccggtcatcggagaagttctgttcgtgtggact 27278506  T
Q  251 gagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaaggttctgctcttcaagaggtaaaca 331  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  27278507 gagtagaggcatcgctgctttgctttgctcgtgattagaaatatttcttctacaaaggttctgctcttcaagaggtaaaca 27278587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 151 - 331
Target Start/End: Original strand, 27303298 - 27303478
Alignment:
Q  151 ttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaattggctagcaccggtcatcggagaagttctgttcgtgtggact 250  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27303298 ttgtgaaaccctagccgccgctctctaaactttgttctctctgaatcttcgttggaattggctagcaccggtcatcggagaagttctgttcgtgtggact 27303397  T
Q  251 gagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaaggttctgctcttcaagaggtaaaca 331  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  27303398 gagtagaggcatcgctgctttgctttgctcgtgattagaaatatttcttctacaaaggttctgctcttcaagaggtaaaca 27303478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 13 - 190
Target Start/End: Complemental strand, 25536469 - 25536292
Alignment:
Q  13 aatatagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcatt 112  Q
    |||| ||||||||| |  |||||||||||| ||||||||||||||||||||  ||  |||||||||||||||||||||||||||||||||||||||||||    
T  25536469 aatagagaaacgcgatcgaccgtaaggtacagtgtatttaagtgttgtctttctgatcacacaagtgattctataaatagaacccttgtgttgaagcatt 25536370  T
Q  113 actaactttttgcgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctct 190  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  25536369 actaactttttgtgagtgcttaacctaattcacaaaagttgtgaaacccaagccgccgctctctaaaccttgttctct 25536292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 69 - 337
Target Start/End: Original strand, 18336550 - 18336815
Alignment:
Q  69 ccacacaagtgattctataaatagaacccttgtgttgaagcattactaactttttgcgagtgcttaacctaattcacaaaagttgtgaaaccctagccgc 168  Q
    ||||||||||| ||||||||||||||| |||||| | ||||||  |  |  |||||  ||||||| |||||||||| |||||| |||||||  || | ||    
T  18336550 ccacacaagtggttctataaatagaactcttgtgctaaagcatgtccga--ttttga-agtgctttacctaattcataaaagtggtgaaacaatatctgc 18336646  T
Q  169 cgctctctaaaccttgttctctctgaatcttcgttggaattggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgc 268  Q
    ||||||||||||||||||||||||| |||| ||||| | |||||||||||| |||||  |||||||| |||||||||||||||||||||| |||||||      
T  18336647 cgctctctaaaccttgttctctctggatctccgttgaagttggctagcaccagtcattagagaagttatgttcgtgtggactgagtagagacatcgctat 18336746  T
Q  269 tttgctttgctcgtgatcggaaatatttcttctacaaaggttctgctcttcaagaggtaaacatatgaa 337  Q
     |||||||||| |||||| |||| |||| | |||||||||||||||||||||||||||||||| |||||    
T  18336747 gttgctttgcttgtgatcagaaacatttatgctacaaaggttctgctcttcaagaggtaaacacatgaa 18336815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 186 - 331
Target Start/End: Complemental strand, 28755386 - 28755244
Alignment:
Q  186 tctctctgaatcttcgttggaattggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgat 285  Q
    ||||||| || |||||||||||||||||||||||| ||||  || ||||||| |||||||||||||||||||| ||| ||| ||||| ||||||||||||    
T  28755386 tctctctcaaccttcgttggaattggctagcaccgatcattaga-aagttctattcgtgtggactgagtagagacattgctactttgatttgctcgtgat 28755288  T
Q  286 cggaaatatttcttctacaaaggttctgctcttcaagaggtaaaca 331  Q
    | |||| | || | |   |||||||||||  |||||||||||||||    
T  28755287 cagaaacaattatgc--aaaaggttctgcgattcaagaggtaaaca 28755244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 235
Target Start/End: Complemental strand, 16393743 - 16393546
Alignment:
Q  30 caccgtaaggtacggtgtatttaagtg-ttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcattactaactttttgcgag 128  Q
    ||||||||||||||||||||||||||| ||| |||| || | ||||||||| ||||||||||||||| |||||| |||| ||||  | | || ||| ||     
T  16393743 caccgtaaggtacggtgtatttaagtgattgacttgatgacgacacaagtggttctataaatagaacacttgtgctgaaacatt--ttagttgttgaga- 16393647  T
Q  129 tgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcg-ttggaattggctagcaccggtcatcg 227  Q
     |||||||||||||||||||      | || ||||||||||||||||||||||    ||||||||||||| || ||| |||||||||| || |||||||     
T  16393646 cgcttaacctaattcacaaa------gtaaacctagccgccgctctctaaacc-caatctctctgaatctccgtttgaaattggctagtactggtcatca 16393554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 16558777 - 16558717
Alignment:
Q  13 aatatagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccaca 73  Q
    |||| ||||||||||| ||||||||| |||||| |||||||||||||||||| || |||||    
T  16558777 aatagagaaacgcggtccaccgtaagatacggtatatttaagtgttgtcttgctgaccaca 16558717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 306; Significance: 1e-172; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 8 - 337
Target Start/End: Original strand, 18252927 - 18253256
Alignment:
Q  8 cgaagaatatagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 107  Q
    |||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18252927 cgaaaaatagagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 18253026  T
Q  108 gcattactaactttttgcgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaa 207  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18253027 gcattactaactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaa 18253126  T
Q  208 ttggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaag 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  18253127 ttggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcagaaatatttcttctacaaag 18253226  T
Q  308 gttctgctcttcaagaggtaaacatatgaa 337  Q
    |||||||||||||||||||||||| |||||    
T  18253227 gttctgctcttcaagaggtaaacacatgaa 18253256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 8 - 337
Target Start/End: Complemental strand, 18531824 - 18531494
Alignment:
Q  8 cgaagaatatagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 107  Q
    |||| |||| ||||||||||| ||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  18531824 cgaaaaatagagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgctgaccacacaagtgattctataaatagaacccttgtgttgaa 18531725  T
Q  108 gcattactaac-tttttgcgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttgga 206  Q
    ||||||| ||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  18531724 gcattacgaacctttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttcttctctctgaatctccgttgga 18531625  T
Q  207 attggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaa 306  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  18531624 attggctagcaccggtcatcggagaagttctgttcgtgtggactaagtagaggcatcgctgctttgctttgctcgtgatcagaaatatttcttctacaaa 18531525  T
Q  307 ggttctgctcttcaagaggtaaacatatgaa 337  Q
    |||||| |||||||||||||||||| |||||    
T  18531524 ggttctactcttcaagaggtaaacacatgaa 18531494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 13 - 337
Target Start/End: Complemental strand, 27309857 - 27309534
Alignment:
Q  13 aatatagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcatt 112  Q
    |||| ||||||||||| |||||||||||||| |||||||||||||||||||| |  |||||||||||||||||||||||||||| |||||||||||||||    
T  27309857 aatagagaaacgcggtccaccgtaaggtacgatgtatttaagtgttgtcttgctaaccacacaagtgattctataaatagaacc-ttgtgttgaagcatt 27309759  T
Q  113 actaactttttgcgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaattggc 212  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| |||||||    
T  27309758 actaactttttgtgagtgcttaacctaattaacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctttgaatctccgttgaaattggc 27309659  T
Q  213 tagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaaggttct 312  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |    
T  27309658 tagcaccggtcatcggagaggttcttttcgtgtggactgagtagaggcatcgctactttgctttgctcgtgatcagaaatatttcttctacaaaggtttt 27309559  T
Q  313 gctcttcaagaggtaaacatatgaa 337  Q
    ||||||||||||||||||| |||||    
T  27309558 gctcttcaagaggtaaacacatgaa 27309534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 13 - 337
Target Start/End: Complemental strand, 9076182 - 9075858
Alignment:
Q  13 aatatagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcatt 112  Q
    |||| ||||||||| | |||||||||||| | |||||||||||||||||||| || ||||||||  ||||||||||||||||||||||||||||||||||    
T  9076182 aatagagaaacgcgatccaccgtaaggtatgctgtatttaagtgttgtcttgctgaccacacaaacgattctataaatagaacccttgtgttgaagcatt 9076083  T
Q  113 actaactttttgcgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaattggc 212  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||||||||||    
T  9076082 actaactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaacctcgttctctttgaatctccgttggaattggc 9075983  T
Q  213 tagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaaggttct 312  Q
    |||||||| |||| ||||| ||||||||| |||||| |||||||||||| |||||||||||||||||||||||| |||||| ||||||||||||| ||||    
T  9075982 tagcaccgatcataggagacgttctgttcatgtggaatgagtagaggcaacgctgctttgctttgctcgtgatcagaaataattcttctacaaagattct 9075883  T
Q  313 gctcttcaagaggtaaacatatgaa 337  Q
    ||||||||||||||||||| |||||    
T  9075882 gctcttcaagaggtaaacacatgaa 9075858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 8 - 337
Target Start/End: Complemental strand, 27130694 - 27130378
Alignment:
Q  8 cgaagaatatagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 107  Q
    |||| |||| |||||||||||  |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  27130694 cgaaaaatagagaaacgcggtctaccgtaaggtacggtgtatttaagtgttgtcttgctgaccacacaagtgattctataaatagaacccttgtgttgaa 27130595  T
Q  108 gcattactaactttttgcgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaa 207  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  27130594 gcattactaactttttgtaagtgcttaacctaattcacaaaagttgtgaaaccctagcctccgctctctaaaccttgttctctctgaatctccgttggaa 27130495  T
Q  208 ttggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaag 307  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||             ||||||||||||||| |||| |||| | ||||||||    
T  27130494 ttggctagcaccggtcttcggagaagttctgttcgtgtggactgagtagag-------------gctttgctcgtgatcagaaagatttatgctacaaag 27130408  T
Q  308 gttctgctcttcaagaggtaaacatatgaa 337  Q
    ||||||||||||||||||||| || |||||    
T  27130407 gttctgctcttcaagaggtaatcacatgaa 27130378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 19 - 337
Target Start/End: Complemental strand, 16358334 - 16358014
Alignment:
Q  19 gaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcattactaac 118  Q
    |||||||||| |||||||||||||  |||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  16358334 gaaacgcggtccaccgtaaggtacaatgtatttaagtgttgtcttgctgaccacacaaatgattctataaatagaacccttgtgttgaagcattactaac 16358235  T
Q  119 tttttgcgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaattgg-ctagca 217  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||| | |||||||||||| ||||||||| ||||||  |||||||||||| ||| ||    
T  16358234 tttttgtgagtgcttaacctaattcacaaaagttgtgaaaccatagctgtcgctctctaaacgttgttctctttgaatccccgttggaattggtctatca 16358135  T
Q  218 ccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgc-tcgtgatcggaaatatttcttctacaaaggttctgctc 316  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||| | ||||||||  ||||||||||||||||||||||||||||    
T  16358134 ccggtcttcggagaagttctgttcttgtggactgagtagaggcatcgctgcttttcttttcttcgtgatcataaatatttcttctacaaaggttctgctc 16358035  T
Q  317 ttcaagaggtaaacatatgaa 337  Q
    ||||||||||||||| |||||    
T  16358034 ttcaagaggtaaacacatgaa 16358014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 227 - 338
Target Start/End: Complemental strand, 21169500 - 21169389
Alignment:
Q  227 ggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaaggttctgctcttcaagaggt 326  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  21169500 ggagaagttctgttcgtgtggactgagtagaggcatcgttgctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggt 21169401  T
Q  327 aaacatatgaaa 338  Q
    ||||| ||||||    
T  21169400 aaacacatgaaa 21169389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 30 - 336
Target Start/End: Complemental strand, 22641135 - 22640833
Alignment:
Q  30 caccgtaaggtacggtgtatttaagtg-ttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcattactaactttttgcgag 128  Q
    |||||||||||| |||||||||||||| ||| || | || | |||||| || ||||||||||||||| |||||| |||| ||||  | | || |||  |     
T  22641135 caccgtaaggtatggtgtatttaagtggttgactagatgacgacacaattggttctataaatagaacacttgtgctgaaacatt--ttagttgttgaaac 22641038  T
Q  129 tgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaattggctagcaccggtcatcgg 228  Q
     ||||||||||||||  ||||||   ||||||||||||||||||||| |||||   ||||||||||||||  ||||||||||||||||||  |||||  |    
T  22641037 -gcttaacctaattct-aaaagtca-gaaaccctagccgccgctctcaaaaccccattctctctgaatctctgttggaattggctagcactagtcataag 22640941  T
Q  229 agaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaaggttctgctcttcaagaggtaa 328  Q
    ||||||||||  ||| ||||| |||||||||||||||| | ||||||||||||||||| |||| | |||| ||||||||||||||  |||||||||||||    
T  22640940 agaagttctgaacgtctggacagagtagaggcatcgctacgttgctttgctcgtgatcagaaacaattctgctacaaaggttctgtgcttcaagaggtaa 22640841  T
Q  329 acatatga 336  Q
    ||| ||||    
T  22640840 acacatga 22640833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 34 - 168
Target Start/End: Complemental strand, 36815882 - 36815747
Alignment:
Q  34 gtaaggtacggtgtatttaagtg-ttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcattactaactttttgcgagtgct 132  Q
    ||||||||||||||| | ||||| ||| |||| || ||||||||||||||||||||||||||||||||||||||||||| ||  |||| ||| |||||||    
T  36815882 gtaaggtacggtgtactaaagtgcttggcttgctgaccacacaagtgattctataaatagaacccttgtgttgaagcatgacagacttcttgtgagtgct 36815783  T
Q  133 taacctaattcacaaaagttgtgaaaccctagccgc 168  Q
    ||||||||||||||||||||||||||||||||||||    
T  36815782 taacctaattcacaaaagttgtgaaaccctagccgc 36815747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 131 - 164
Target Start/End: Complemental strand, 27276724 - 27276691
Alignment:
Q  131 cttaacctaattcacaaaagttgtgaaaccctag 164  Q
    ||||||||||||||||||||||||||||||||||    
T  27276724 cttaacctaattcacaaaagttgtgaaaccctag 27276691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 110
Target Start/End: Original strand, 23509839 - 23509879
Alignment:
Q  70 cacacaagtgattctataaatagaacccttgtgttgaagca 110  Q
    |||||||||| |||||| |||||||||||||||||||||||    
T  23509839 cacacaagtggttctattaatagaacccttgtgttgaagca 23509879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 107
Target Start/End: Original strand, 25662053 - 25662090
Alignment:
Q  70 cacacaagtgattctataaatagaacccttgtgttgaa 107  Q
    |||||||||| || ||||||||||||||||||||||||    
T  25662053 cacacaagtggttttataaatagaacccttgtgttgaa 25662090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 302; Significance: 1e-170; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 302; E-Value: 1e-170
Query Start/End: Original strand, 8 - 337
Target Start/End: Complemental strand, 5506 - 5177
Alignment:
Q  8 cgaagaatatagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 107  Q
    |||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5506 cgaaaaatagagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 5407  T
Q  108 gcattactaactttttgcgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaa 207  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  5406 gcattactaactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatctccgttggaa 5307  T
Q  208 ttggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaag 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  5306 ttggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcagaaatatttcttctacaaag 5207  T
Q  308 gttctgctcttcaagaggtaaacatatgaa 337  Q
    |||||||||||||||||||||||| |||||    
T  5206 gttctgctcttcaagaggtaaacacatgaa 5177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 298; Significance: 1e-167; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 8 - 337
Target Start/End: Original strand, 8859089 - 8859418
Alignment:
Q  8 cgaagaatatagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 107  Q
    |||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8859089 cgaaaaatagagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 8859188  T
Q  108 gcattactaactttttgcgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaa 207  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8859189 gcattactaactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaa 8859288  T
Q  208 ttggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaag 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||    
T  8859289 ttggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcagaaagatttctgctacaaag 8859388  T
Q  308 gttctgctcttcaagaggtaaacatatgaa 337  Q
    |||||||||||||||||||||||| |||||    
T  8859389 gttctgctcttcaagaggtaaacacatgaa 8859418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 8 - 337
Target Start/End: Original strand, 18269970 - 18270299
Alignment:
Q  8 cgaagaatatagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 107  Q
    |||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18269970 cgaaaaatagagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 18270069  T
Q  108 gcattactaactttttgcgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaa 207  Q
     ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  18270070 acatgactaactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatctccgttggaa 18270169  T
Q  208 ttggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaag 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  18270170 ttggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcagaaatatttcttctataaag 18270269  T
Q  308 gttctgctcttcaagaggtaaacatatgaa 337  Q
    ||||||||| |||||||||||||| |||||    
T  18270270 gttctgctcgtcaagaggtaaacacatgaa 18270299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 8 - 337
Target Start/End: Complemental strand, 19919816 - 19919487
Alignment:
Q  8 cgaagaatatagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 107  Q
    |||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19919816 cgaaaaatagagaaacgcggttcaccgtaagatacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 19919717  T
Q  108 gcattactaactttttgcgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaa 207  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||    
T  19919716 gcattactacctttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttcttctctctgaatctccgttgaaa 19919617  T
Q  208 ttggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaag 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  19919616 ttggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcagaaatatttcttctacaaag 19919517  T
Q  308 gttctgctcttcaagaggtaaacatatgaa 337  Q
    ||| |||||||||||||||||||| |||||    
T  19919516 gttgtgctcttcaagaggtaaacacatgaa 19919487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 8 - 337
Target Start/End: Complemental strand, 19926045 - 19925716
Alignment:
Q  8 cgaagaatatagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 107  Q
    |||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19926045 cgaaaaatagagaaacgcggttcaccgtaagatacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 19925946  T
Q  108 gcattactaactttttgcgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaa 207  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  19925945 gcattactacctttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttcttctctctgaatctccgttggaa 19925846  T
Q  208 ttggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaag 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  19925845 ttggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcattgctgctttgctttgctcgtgatcagaaatatttcttctacaaag 19925746  T
Q  308 gttctgctcttcaagaggtaaacatatgaa 337  Q
    ||| |||||||||||||||||||| |||||    
T  19925745 gttgtgctcttcaagaggtaaacacatgaa 19925716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 20 - 337
Target Start/End: Original strand, 26971374 - 26971691
Alignment:
Q  20 aaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcattactaact 119  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  26971374 aaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaaacattactaact 26971473  T
Q  120 ttttgcgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaattggctagcacc 219  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26971474 ttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaattggctagcacc 26971573  T
Q  220 ggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaaggttctgctcttc 319  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| | ||||||||||||||||||||    
T  26971574 ggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcagaaagatttatgctacaaaggttctgctcttc 26971673  T
Q  320 aagaggtaaacatatgaa 337  Q
    |||||||||||| |||||    
T  26971674 aagaggtaaacacatgaa 26971691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 8 - 337
Target Start/End: Original strand, 869518 - 869847
Alignment:
Q  8 cgaagaatatagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 107  Q
    |||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  869518 cgaaaaatagagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 869617  T
Q  108 gcattactaactttttgcgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaa 207  Q
     |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||    
T  869618 acattactaaccttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaacatagttctctctgaatctccgttggaa 869717  T
Q  208 ttggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaag 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||     
T  869718 ttggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcagaaatatttcttctacaaat 869817  T
Q  308 gttctgctcttcaagaggtaaacatatgaa 337  Q
    |||||||||||||||||||||||| |||||    
T  869818 gttctgctcttcaagaggtaaacacatgaa 869847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 8 - 337
Target Start/End: Original strand, 18263109 - 18263438
Alignment:
Q  8 cgaagaatatagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 107  Q
    |||| |||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18263109 cgaaaaatagagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 18263208  T
Q  108 gcattactaactttttgcgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaa 207  Q
     ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  18263209 acatgactaactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatctccgttggaa 18263308  T
Q  208 ttggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaag 307  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  18263309 ttggctagcaccggtcatcggataagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcagaaatatttcttctacaaag 18263408  T
Q  308 gttctgctcttcaagaggtaaacatatgaa 337  Q
    ||||||||| |||||||||||||| |||||    
T  18263409 gttctgctcgtcaagaggtaaacacatgaa 18263438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 280; E-Value: 1e-157
Query Start/End: Original strand, 18 - 337
Target Start/End: Original strand, 55613616 - 55613934
Alignment:
Q  18 agaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcattactaa 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  55613616 agaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcattactta 55613715  T
Q  118 ctttttgcgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaattggctagca 217  Q
    ||||||| |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55613716 ctttttgtgagtgcttaacctaattcacaaaagttgtgaaactc-agccgccgctctctaaaccttgttctctctgaatcttcgttggaattggctagca 55613814  T
Q  218 ccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaaggttctgctct 317  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||||    
T  55613815 ccagtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcagaaagatttctgctacaaaggttctgctct 55613914  T
Q  318 tcaagaggtaaacatatgaa 337  Q
    |||||||||||||| |||||    
T  55613915 tcaagaggtaaacacatgaa 55613934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 8 - 337
Target Start/End: Complemental strand, 28392452 - 28392123
Alignment:
Q  8 cgaagaatatagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 107  Q
    |||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  28392452 cgaaaaatagagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgctgaccacacaagtgattctataaatagaacccttgtgttgaa 28392353  T
Q  108 gcattactaactttttgcgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaa 207  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||| ||||||||    
T  28392352 gcattactaactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagctgccgctctttaaaccttcttctctctgaatctccgttggaa 28392253  T
Q  208 ttggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaag 307  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  28392252 ttggctagcaccagtcatcggagaagtactgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcagaaatatttcttctacaaag 28392153  T
Q  308 gttctgctcttcaagaggtaaacatatgaa 337  Q
    ||||||||||||||||||||||||||||||    
T  28392152 gttctgctcttcaagaggtaaacatatgaa 28392123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 8 - 337
Target Start/End: Original strand, 5714869 - 5715199
Alignment:
Q  8 cgaagaatatagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 107  Q
    |||| |||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5714869 cgaaaaatagagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 5714968  T
Q  108 gcattactaactttttgc-gagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttgga 206  Q
     |||||||||| |||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||    
T  5714969 acattactaaccttttgttgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaacgtagttctctctgaatctccgttgga 5715068  T
Q  207 attggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaa 306  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  5715069 attggctagcactggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcagaaatatttcttctacaaa 5715168  T
Q  307 ggttctgctcttcaagaggtaaacatatgaa 337  Q
    ||||||||||||||||||||||||| |||||    
T  5715169 ggttctgctcttcaagaggtaaacacatgaa 5715199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 8 - 337
Target Start/End: Original strand, 5708234 - 5708563
Alignment:
Q  8 cgaagaatatagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 107  Q
    |||| |||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5708234 cgaaaaatagagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 5708333  T
Q  108 gcattactaactttttgcgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaa 207  Q
     |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||| ||||||||    
T  5708334 acattactaaccttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgctgctctctaaacgtagttctctctgaatctccgttggaa 5708433  T
Q  208 ttggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaag 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  5708434 ttggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcagaaatatttcttatacaaag 5708533  T
Q  308 gttctgctcttcaagaggtaaacatatgaa 337  Q
     ||||||||||||||||||||||| |||||    
T  5708534 attctgctcttcaagaggtaaacacatgaa 5708563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 13 - 336
Target Start/End: Complemental strand, 4425920 - 4425597
Alignment:
Q  13 aatatagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcatt 112  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  4425920 aatagagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgctgaccacacaagtgattctataaatagaacccttgtgttgaagcatt 4425821  T
Q  113 actaactttttgcgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaattggc 212  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  4425820 actaactttttgtaagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctttgaatctccgttggaattggc 4425721  T
Q  213 tagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaaggttct 312  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||     
T  4425720 tagcaccggtcatcggagaagttctgttcgtgtggactaagtagaggcatcgctgctttgctttgctcgtgattagaaatatttcttctacaaaagttca 4425621  T
Q  313 gctcttcaagaggtaaacatatga 336  Q
    ||||||||||||||||||| ||||    
T  4425620 gctcttcaagaggtaaacacatga 4425597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 8 - 338
Target Start/End: Complemental strand, 10627700 - 10627370
Alignment:
Q  8 cgaagaatatagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 107  Q
    |||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  10627700 cgaaaaatagagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgctgaccacacaagtgattctataaatagaacccttgtgttgaa 10627601  T
Q  108 gcattactaactttttgcgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaa 207  Q
    |||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||||    
T  10627600 gcattactgactttttgtgagtgcttgacctaattcacaaaagttgtgaaaccctagccgtcgctctctaaaccttgttctctctgaatctccattggaa 10627501  T
Q  208 ttggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaag 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| ||||| ||    
T  10627500 ttggctagcaccggtcatcggagaagttctgttcgtgtggactgaatagaggcatcgctgctttgctttgctcgtgatcagaaagatttctgctacagag 10627401  T
Q  308 gttctgctcttcaagaggtaaacatatgaaa 338  Q
    |||||||||||||||||||||||| ||||||    
T  10627400 gttctgctcttcaagaggtaaacacatgaaa 10627370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 8 - 337
Target Start/End: Complemental strand, 10620618 - 10620289
Alignment:
Q  8 cgaagaatatagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 107  Q
    |||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  10620618 cgaaaaatagagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgctgaccacacaagtgattctataaatagaacccttgtgttgaa 10620519  T
Q  108 gcattactaactttttgcgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaa 207  Q
    |||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||    
T  10620518 gcattactgactttttgtgagtgcttgacctaattcacaaaagttgtgaaaccctagccgtcgctctctaaaccttgttctctctgaatctctgttggaa 10620419  T
Q  208 ttggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaag 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| ||||| ||    
T  10620418 ttggctagcaccggtcatcggagaagttctgttcgtgtggactgaatagaggcatcgctgctttgctttgctcgtgatcagaaagatttctgctacagag 10620319  T
Q  308 gttctgctcttcaagaggtaaacatatgaa 337  Q
    |||||||||||||||||||||||| |||||    
T  10620318 gttctgctcttcaagaggtaaacacatgaa 10620289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 130 - 337
Target Start/End: Original strand, 26964590 - 26964797
Alignment:
Q  130 gcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaattggctagcaccggtcatcgga 229  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26964590 gcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaattggctagcaccggtcatcgga 26964689  T
Q  230 gaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaaggttctgctcttcaagaggtaaa 329  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| | ||||||||||||||||||||||||||||||    
T  26964690 gaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcagaaagatttatgctacaaaggttctgctcttcaagaggtaaa 26964789  T
Q  330 catatgaa 337  Q
    || |||||    
T  26964790 cacatgaa 26964797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 34 - 320
Target Start/End: Complemental strand, 47388215 - 47387928
Alignment:
Q  34 gtaaggtacggtgtatttaagtg-ttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcattactaactttttgcgagtgct 132  Q
    ||||||||||||||| ||||||| ||| |||| |  ||||||||||||||  |||||||||||| ||||| |||| ||||||| ||||||   |||||||    
T  47388215 gtaaggtacggtgtacttaagtgcttggcttgctcaccacacaagtgatttgataaatagaaccattgtgctgaaacattactgacttttgttgagtgct 47388116  T
Q  133 taacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaattggctagcaccggtcatcggagaa 232  Q
    ||||||||||||||||||  ||||||||||||||||| ||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||||    
T  47388115 taacctaattcacaaaaggcgtgaaaccctagccgccactctctaaacctttttctcactgaatctccgttggaattggctagcaccggtcatcggagaa 47388016  T
Q  233 gttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaaggttctgctcttca 320  Q
    |||||||||||||||||| |||||||||||||||   ||||||||||||||||| |||| | || | |||||||||||||||||||||    
T  47388015 gttctgttcgtgtggactaagtagaggcatcgctatgttgctttgctcgtgatcagaaacaattatgctacaaaggttctgctcttca 47387928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 8 - 190
Target Start/End: Original strand, 8846100 - 8846282
Alignment:
Q  8 cgaagaatatagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 107  Q
    |||| |||| ||||||||||| || ||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||||||| |||||    
T  8846100 cgaaaaatagagaaacgcggtccaacgtaaggtacgatgtatttaagtgttgtcttgctgaccacacaagtgattctataaatagaacccttgtattgaa 8846199  T
Q  108 gcattactaactttttgcgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctct 190  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  8846200 gcattactaactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaactttgttctct 8846282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 33 - 188
Target Start/End: Complemental strand, 5667354 - 5667198
Alignment:
Q  33 cgtaaggtacggtgtatttaagtg-ttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcattactaactttttgcgagtgc 131  Q
    |||||||||||||||| ||||||| ||| |||| || |||||||||||||||||||||||||||||||||| |||||||||||  | |||||| ||||||    
T  5667354 cgtaaggtacggtgtacttaagtgcttggcttgctgaccacacaagtgattctataaatagaacccttgtgctgaagcattacatattttttgtgagtgc 5667255  T
Q  132 ttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttct 188  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  5667254 ttaaccttattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttct 5667198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 173 - 337
Target Start/End: Complemental strand, 10676709 - 10676545
Alignment:
Q  173 ctctaaaccttgttctctctgaatcttcgttggaattggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttg 272  Q
    ||||||||| | ||||||||||||||  ||||| ||||||||| |||||||||||||||||||||||| ||||||||| | ||||||||||||| | ||     
T  10676709 ctctaaaccctattctctctgaatctctgttggtattggctagaaccggtcatcggagaagttctgtttgtgtggactaaatagaggcatcgctacgtta 10676610  T
Q  273 ctttgctcgtgatcggaaatatttcttctacaaaggttctgctcttcaagaggtaaacatatgaa 337  Q
    |||||||||||||| |||| | || | ||||||||||||| |||||||||||||||||| |||||    
T  10676609 ctttgctcgtgatcagaaacaattatgctacaaaggttcttctcttcaagaggtaaacacatgaa 10676545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 173 - 337
Target Start/End: Complemental strand, 10890349 - 10890185
Alignment:
Q  173 ctctaaaccttgttctctctgaatcttcgttggaattggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttg 272  Q
    ||||||||| | ||||||||||||||  ||||| ||||||||| |||||||||||||||||||||||| ||||||||| | ||||||||||||| | ||     
T  10890349 ctctaaaccctattctctctgaatctctgttggtattggctagaaccggtcatcggagaagttctgtttgtgtggactaaatagaggcatcgctacgtta 10890250  T
Q  273 ctttgctcgtgatcggaaatatttcttctacaaaggttctgctcttcaagaggtaaacatatgaa 337  Q
    |||||||||||||| |||| | || | ||||||||||||| |||||||||||||||||| |||||    
T  10890249 ctttgctcgtgatcagaaacaattatgctacaaaggttcttctcttcaagaggtaaacacatgaa 10890185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 13 - 337
Target Start/End: Original strand, 35224458 - 35224778
Alignment:
Q  13 aatatagaaacgcggttcaccgtaaggtacggtgtatttaagtg-ttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcat 111  Q
    |||| ||||||||||| ||||||||||||||||||| ||||||| ||| |||  ||  |||||||||| |||||||||||||||||||||| |||| | |    
T  35224458 aatagagaaacgcggtccaccgtaaggtacggtgtacttaagtgcttgactttatgagcacacaagtggttctataaatagaacccttgtgctgaaactt 35224557  T
Q  112 tactaactttttgcgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaattgg 211  Q
    |  |    |  |   |  ||||||||||||||  |||||||  |||||| |||||||| ||||||||||| | |||| ||||||| | |||||||||||     
T  35224558 ttttgg--tggtcgaaacgcttaacctaattct-aaaagtta-gaaacc-tagccgcctctctctaaaccctattctttctgaatatccgttggaattga 35224652  T
Q  212 ctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaaggttc 311  Q
    ||||||| |||||||| ||||| |||||||||||||||||||||||||||||| |   ||||||||||||||||| |||| |  ||  |||||||  |||    
T  35224653 ctagcacgggtcatcgaagaagctctgttcgtgtggactgagtagaggcatcgatatcttgctttgctcgtgatcagaaacaactcggctacaaaatttc 35224752  T
Q  312 tgctcttcaagaggtaaacatatgaa 337  Q
    ||| |||||||||||||||| |||||    
T  35224753 tgcgcttcaagaggtaaacacatgaa 35224778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 242 - 337
Target Start/End: Complemental strand, 20579488 - 20579393
Alignment:
Q  242 gtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaaggttctgctcttcaagaggtaaacatatgaa 337  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||| |||||    
T  20579488 gtgtggactgaatagaggcatcgctgctttgctttgctcgtgatcagaattatttcttctacaaaggttctactcttcaagaggtaaacacatgaa 20579393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 254 - 337
Target Start/End: Complemental strand, 10825391 - 10825308
Alignment:
Q  254 tagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaaggttctgctcttcaagaggtaaacatatgaa 337  Q
    ||||||||||||||||||||||||||||||||| |||| |||||| ||||| |||||||||||||||||||||||||| |||||    
T  10825391 tagaggcatcgctgctttgctttgctcgtgatcagaaagatttctgctacagaggttctgctcttcaagaggtaaacacatgaa 10825308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 173 - 240
Target Start/End: Original strand, 10690356 - 10690423
Alignment:
Q  173 ctctaaaccttgttctctctgaatcttcgttggaattggctagcaccggtcatcggagaagttctgtt 240  Q
    ||||||||| | ||||||||||||||  ||||| ||||||||||| ||||||||||||||||||||||    
T  10690356 ctctaaaccctattctctctgaatctctgttggtattggctagcatcggtcatcggagaagttctgtt 10690423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 173 - 240
Target Start/End: Original strand, 10903996 - 10904063
Alignment:
Q  173 ctctaaaccttgttctctctgaatcttcgttggaattggctagcaccggtcatcggagaagttctgtt 240  Q
    ||||||||| | ||||||||||||||  ||||| ||||||||||| ||||||||||||||||||||||    
T  10903996 ctctaaaccctattctctctgaatctctgttggtattggctagcatcggtcatcggagaagttctgtt 10904063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 295 - 337
Target Start/End: Complemental strand, 5667192 - 5667150
Alignment:
Q  295 ttcttctacaaaggttctgctcttcaagaggtaaacatatgaa 337  Q
    |||| |||||||||||||||||||||||||||||||| |||||    
T  5667192 ttctactacaaaggttctgctcttcaagaggtaaacacatgaa 5667150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 112
Target Start/End: Complemental strand, 10676821 - 10676753
Alignment:
Q  45 tgtatttaagtg-ttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcatt 112  Q
    |||||||||||| ||| ||||||| ||||||||||| |||||||||||||||| || || | |||||||    
T  10676821 tgtatttaagtgcttggcttgttgaccacacaagtggttctataaatagaaccattctgctaaagcatt 10676753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 112
Target Start/End: Complemental strand, 10890461 - 10890393
Alignment:
Q  45 tgtatttaagtg-ttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcatt 112  Q
    |||||||||||| ||| ||||||| ||||||||||| |||||||||||||||| || || | |||||||    
T  10890461 tgtatttaagtgcttggcttgttgaccacacaagtggttctataaatagaaccattctgctaaagcatt 10890393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 112
Target Start/End: Original strand, 10690247 - 10690312
Alignment:
Q  48 atttaagtg-ttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcatt 112  Q
    ||||||||| ||| ||||||| ||||||||||| |||||  ||||||||||||||| | |||||||    
T  10690247 atttaagtgcttggcttgttgaccacacaagtggttctaataatagaacccttgtgctaaagcatt 10690312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 112
Target Start/End: Original strand, 10903887 - 10903952
Alignment:
Q  48 atttaagtg-ttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcatt 112  Q
    ||||||||| ||| ||||||| ||||||||||| |||||  ||||||||||||||| | |||||||    
T  10903887 atttaagtgcttggcttgttgaccacacaagtggttctaataatagaacccttgtgctaaagcatt 10903952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 297; Significance: 1e-167; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 297; E-Value: 1e-167
Query Start/End: Original strand, 13 - 337
Target Start/End: Complemental strand, 10578637 - 10578313
Alignment:
Q  13 aatatagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcatt 112  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10578637 aatagagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcatt 10578538  T
Q  113 actaactttttgcgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaattggc 212  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10578537 actaactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaattggc 10578438  T
Q  213 tagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaaggttct 312  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| |||||| |||||||||||||    
T  10578437 tagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgttttgctcgtgatcagaaaaatttctgctacaaaggttct 10578338  T
Q  313 gctcttcaagaggtaaacatatgaa 337  Q
    ||||||||||||||||||| |||||    
T  10578337 gctcttcaagaggtaaacacatgaa 10578313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 8 - 337
Target Start/End: Complemental strand, 15341529 - 15341200
Alignment:
Q  8 cgaagaatatagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 107  Q
    |||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15341529 cgaaaaatagagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 15341430  T
Q  108 gcattactaactttttgcgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaa 207  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15341429 gcattactaactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaa 15341330  T
Q  208 ttggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaag 307  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  15341329 ttggctagcaccgatcatcggagaagttctgttcatgtggactgagtagaggcatcgctgctttgctttgctcgtgatcagaaatattttttctacaaag 15341230  T
Q  308 gttctgctcttcaagaggtaaacatatgaa 337  Q
    |||||||||||||||||||||||| |||||    
T  15341229 gttctgctcttcaagaggtaaacacatgaa 15341200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 13 - 337
Target Start/End: Complemental strand, 10571871 - 10571547
Alignment:
Q  13 aatatagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcatt 112  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10571871 aatagagaaacgcggttcaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcatt 10571772  T
Q  113 actaactttttgcgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaattggc 212  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  10571771 actaactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaattgac 10571672  T
Q  213 tagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaaggttct 312  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||    
T  10571671 tagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcagaaagatttctgctacaaaggttct 10571572  T
Q  313 gctcttcaagaggtaaacatatgaa 337  Q
    ||||||||||||||||||| |||||    
T  10571571 gctcttcaagaggtaaacacatgaa 10571547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 290; E-Value: 1e-163
Query Start/End: Original strand, 8 - 337
Target Start/End: Complemental strand, 15356896 - 15356567
Alignment:
Q  8 cgaagaatatagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 107  Q
    |||| |||| ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15356896 cgaaaaatagagaaacgcggtccaccgtaaggtacggtgtatttaattgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 15356797  T
Q  108 gcattactaactttttgcgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaa 207  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15356796 gcattactaactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaa 15356697  T
Q  208 ttggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaag 307  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||    
T  15356696 ttggctagcaccgatcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcatgatcagaaatattttttctacaaag 15356597  T
Q  308 gttctgctcttcaagaggtaaacatatgaa 337  Q
    |||||||||||||||||||||||| |||||    
T  15356596 gttctgctcttcaagaggtaaacacatgaa 15356567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 290; E-Value: 1e-163
Query Start/End: Original strand, 8 - 337
Target Start/End: Complemental strand, 15600194 - 15599865
Alignment:
Q  8 cgaagaatatagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 107  Q
    |||| |||| ||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15600194 cgaaaaatagagaaacgcggtccaccgtaaggtatggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 15600095  T
Q  108 gcattactaactttttgcgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaa 207  Q
     |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15600094 acattactaactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaa 15599995  T
Q  208 ttggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaag 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||    
T  15599994 ttggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcagaaagatttctgctacaaag 15599895  T
Q  308 gttctgctcttcaagaggtaaacatatgaa 337  Q
    |||||||||||||||||||||||| |||||    
T  15599894 gttctgctcttcaagaggtaaacacatgaa 15599865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 8 - 337
Target Start/End: Complemental strand, 15606739 - 15606410
Alignment:
Q  8 cgaagaatatagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 107  Q
    |||| |||| ||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15606739 cgaaaaatagagaaacgcggtccaccgtaaggtatggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 15606640  T
Q  108 gcattactaactttttgcgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaa 207  Q
     |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15606639 acattactaactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaa 15606540  T
Q  208 ttggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaag 307  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||    
T  15606539 ttggctagcaccggtcatcgaagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcagaaagatttctgctacaaag 15606440  T
Q  308 gttctgctcttcaagaggtaaacatatgaa 337  Q
    |||||||||||||||||||||||| |||||    
T  15606439 gttctgctcttcaagaggtaaacacatgaa 15606410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 280; E-Value: 1e-157
Query Start/End: Original strand, 18 - 337
Target Start/End: Complemental strand, 16481757 - 16481439
Alignment:
Q  18 agaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcattactaa 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  16481757 agaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcattactta 16481658  T
Q  118 ctttttgcgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaattggctagca 217  Q
    ||||||| |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16481657 ctttttgtgagtgcttaacctaattcacaaaagttgtgaaactc-agccgccgctctctaaaccttgttctctctgaatcttcgttggaattggctagca 16481559  T
Q  218 ccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaaggttctgctct 317  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||||    
T  16481558 ccagtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcagaaagatttctgctacaaaggttctgctct 16481459  T
Q  318 tcaagaggtaaacatatgaa 337  Q
    |||||||||||||| |||||    
T  16481458 tcaagaggtaaacacatgaa 16481439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 13 - 337
Target Start/End: Original strand, 6110991 - 6111326
Alignment:
Q  13 aatatagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcatt 112  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6110991 aatagagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcatt 6111090  T
Q  113 actaa-----------ctttttgcgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcg 201  Q
    || ||           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  6111091 accaaaaaaaaaaaaactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaactttgttctctctgaatcttcg 6111190  T
Q  202 ttggaattggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttct 301  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  6111191 ttggaattggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcagaaatatttcttct 6111290  T
Q  302 acaaaggttctgctcttcaagaggtaaacatatgaa 337  Q
    |||||||||||||||||||||||||||||| |||||    
T  6111291 acaaaggttctgctcttcaagaggtaaacacatgaa 6111326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 13 - 337
Target Start/End: Original strand, 13517711 - 13518035
Alignment:
Q  13 aatatagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcatt 112  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||| ||| || ||||||||||  |||||||||||||||||||||||||||||||     
T  13517711 aatagagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgttttgctgaccacacaagtatttctataaatagaacccttgtgttgaagcatg 13517810  T
Q  113 actaactttttgcgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaattggc 212  Q
    ||||||||  || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| |||||||||||||    
T  13517811 actaacttaatgtgagtgctaaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaacattgttctctttgaatctccgttggaattggc 13517910  T
Q  213 tagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaaggttct 312  Q
    |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  13517911 tagcaccggtcatcagagaagttatgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcagaaatatttcttctacaaaggttct 13518010  T
Q  313 gctcttcaagaggtaaacatatgaa 337  Q
    ||| ||||||||||||||| |||||    
T  13518011 gcttttcaagaggtaaacacatgaa 13518035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 13 - 337
Target Start/End: Original strand, 18537897 - 18538221
Alignment:
Q  13 aatatagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcatt 112  Q
    |||| ||||||||||||||||||||||||| ||||| ||||||||||||||| || || |||||||||||||||||||||||| |||||| |||||||||    
T  18537897 aatagagaaacgcggttcaccgtaaggtacagtgtagttaagtgttgtcttgctgaccgcacaagtgattctataaatagaactcttgtgctgaagcatt 18537996  T
Q  113 actaactttttgcgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaattggc 212  Q
    |  ||| ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||| ||||||||    
T  18537997 atgaaccttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgtcgctctctaaaccttggtctctctgaatctccgtttgaattggc 18538096  T
Q  213 tagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaaggttct 312  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||    
T  18538097 tagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcagaaagatttctgctacaaaggttct 18538196  T
Q  313 gctcttcaagaggtaaacatatgaa 337  Q
    |||||||||||| |||||| |||||    
T  18538197 gctcttcaagagataaacacatgaa 18538221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 8 - 331
Target Start/End: Complemental strand, 1646806 - 1646483
Alignment:
Q  8 cgaagaatatagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 107  Q
    |||| |||| ||||||||||| ||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  1646806 cgaaaaatagagaaacgcggtccaccgtaaggtacggtgcatttaagtgttgtcttgctgaccacacaagtgattctataaatagaacccttgtgttgaa 1646707  T
Q  108 gcattactaactttttgcgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaa 207  Q
    |||||||||| |||||| ||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||| ||||||| |||| |||    
T  1646706 gcattactaattttttgtgagtgcttaacctaattaacaaaagttgtgaaaccctagtcgtcgctctctaaaccttgttctctttgaatctccgttagaa 1646607  T
Q  208 ttggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaag 307  Q
    |||||| |||||||||||||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||  ||||||||| ||||||||||    
T  1646606 ttggcttgcaccggtcatcggagaagttctgttcgtgtggactaagtagaggtatcgctactttgctttgctcgtgattagaaatatttattctacaaag 1646507  T
Q  308 gttctgctcttcaagaggtaaaca 331  Q
    ||||||||||||||||||||||||    
T  1646506 gttctgctcttcaagaggtaaaca 1646483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 8 - 316
Target Start/End: Complemental strand, 17197058 - 17196750
Alignment:
Q  8 cgaagaatatagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 107  Q
    |||| |||| ||||||||||| ||||||||||||| ||||||||||||||||||||| || ||| |||||||||||||||||||||||||||||||||||    
T  17197058 cgaaaaatagagaaacgcggtccaccgtaaggtactgtgtatttaagtgttgtcttgctgaccagacaagtgattctataaatagaacccttgtgttgaa 17196959  T
Q  108 gcattactaactttttgcgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaa 207  Q
    |||||||||||||||||   ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  17196958 gcattactaactttttgtttgtgcttaacttaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctttgaatctccgttggaa 17196859  T
Q  208 ttggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaag 307  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||| ||||||||| ||||||||||||||||||||    
T  17196858 ttggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaagcatcactgttttgctttactcgtgatcagaaatatttcttctacaaag 17196759  T
Q  308 gttctgctc 316  Q
    |||||||||    
T  17196758 gttctgctc 17196750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 8 - 307
Target Start/End: Complemental strand, 32056355 - 32056056
Alignment:
Q  8 cgaagaatatagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 107  Q
    |||| |||| |||||||| || ||| ||||||||| ||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||| ||    
T  32056355 cgaaaaatagagaaacgcagtccactgtaaggtacagtgtatttaagtgttgtcttgctgatcacacaagtgattctataaatagaacccttgtgttcaa 32056256  T
Q  108 gcattactaactttttgcgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaa 207  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | ||||| ||    
T  32056255 gcattactaactttttgtgattgcttaacctaattcacaaaagttgtgaagccctagccgccgctctctaaaccttgttctctctgaatttccgttgaaa 32056156  T
Q  208 ttggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaag 307  Q
    ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||    
T  32056155 ttggctagcaccggtcatcagagaagttctgttcgtgtggaccgagtagaggcatcgctgctttgctttgctcgtgatcagaaagatttctgctacaaag 32056056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 142 - 337
Target Start/End: Original strand, 13212331 - 13212526
Alignment:
Q  142 tcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaattggctagcaccggtcatcggagaagttctgttc 241  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  13212331 tcacaaaagttgtgaaaccctagccgccgctctctaaactttgttctctctgaatcttcgttggaattggctagcaccggtcatcggagaagttttgttc 13212430  T
Q  242 gtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaaggttctgctcttcaagaggtaaacatatgaa 337  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  13212431 gtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaa 13212526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 155 - 337
Target Start/End: Original strand, 8491428 - 8491610
Alignment:
Q  155 gaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaattggctagcaccggtcatcggagaagttctgttcgtgtggactgagt 254  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  8491428 gaaaccctagccgccgctctctaaaccttgttctctctgaatctccgttggaattggctagcaccgatcatcggagaagttctgttcgtgtggactgagt 8491527  T
Q  255 agaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaaggttctgctcttcaagaggtaaacatatgaa 337  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  8491528 agaggcatcgctgctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaa 8491610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 8 - 193
Target Start/End: Complemental strand, 17780428 - 17780243
Alignment:
Q  8 cgaagaatatagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 107  Q
    |||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  17780428 cgaaaaatagagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgttgaccacacaagtgattctataaatagaacccttgtgttgaa 17780329  T
Q  108 gcattactaactttttgcgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctg 193  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  17780328 gcattactaactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaactttgttctctctg 17780243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 8 - 193
Target Start/End: Complemental strand, 19081729 - 19081544
Alignment:
Q  8 cgaagaatatagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 107  Q
    |||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  19081729 cgaaaaatagagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgttgaccacacaagtgattctataaatagaacccttgtgttgaa 19081630  T
Q  108 gcattactaactttttgcgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctg 193  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  19081629 gcattactaactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaactttgttctctctg 19081544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 8 - 237
Target Start/End: Original strand, 17137275 - 17137505
Alignment:
Q  8 cgaagaatatagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaa-gtgattctataaatagaacccttgtgttga 106  Q
    |||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||| |||||| |||||||||||||||||||||||    
T  17137275 cgaaaaatagagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgctgaccacacaaagtgattttataaatagaacccttgtgttga 17137374  T
Q  107 agcattactaactttttgcgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttgga 206  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||||||| ||||  ||| |||||||||| ||||||||| ||||||| |||||||    
T  17137375 agcattactaactttttgtgagtgcttaacctaattaacaaaagttgtgaaacactagttgcctctctctaaactttgttctctttgaatctccgttgga 17137474  T
Q  207 attggctagcaccggtcatcggagaagttct 237  Q
    ||||||||||||| |||||||||||||||||    
T  17137475 attggctagcaccagtcatcggagaagttct 17137505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 8 - 337
Target Start/End: Complemental strand, 23014653 - 23014324
Alignment:
Q  8 cgaagaatatagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 107  Q
    |||| |||| |||||||| ||  || |||||||| | |||||||||||| |   ||| || ||||||||||| |||||||||||||||||||||| ||||    
T  23014653 cgaaaaatagagaaacgcagtctactgtaaggtatgatgtatttaagtggttggttgctgaccacacaagtggttctataaatagaacccttgtgctgaa 23014554  T
Q  108 gcattactaactttttgcgagtg---cttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttg 204  Q
    |||||| ||||||||||   |     |||||||||||||  |||||||  |||||||||||||||||||||||||||| || ||||||||||||  ||||    
T  23014553 gcattagtaactttttggttgaaacacttaacctaattct-aaaagtta-gaaaccctagccgccgctctctaaacctagt-ctctctgaatctctgttg 23014457  T
Q  205 gaattggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctaca 304  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||  ||||||||||| ||||    
T  23014456 gaattggcttgcaccgatcatcggagaagttctgttcgtgtggactgagtagagacatcgccgctttgctttgctcgtgatcataaatatttcttataca 23014357  T
Q  305 aaggttctgctcttcaagaggtaaacatatgaa 337  Q
    ||||||||| ||||||||||||||||| |||||    
T  23014356 aaggttctgttcttcaagaggtaaacacatgaa 23014324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 30 - 331
Target Start/End: Original strand, 16201136 - 16201439
Alignment:
Q  30 caccgtaaggtacggtgta-tttaagtg-ttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcattactaactttttgcga 127  Q
    ||||||| ||||||||||| |||||||| ||| |||  || |||||||||||||||||||||| ||||||||||| ||||| ||||   ||||||   ||    
T  16201136 caccgtatggtacggtgtactttaagtgcttgacttactgaccacacaagtgattctataaattgaacccttgtgctgaagtattatagacttttgttga 16201235  T
Q  128 -gtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaattggctagcaccggtcatc 226  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||| || || | |||| ||| |  ||||||||||||| |||| |||||||    
T  16201236 agtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaagctagt-cgctctaaatttctgttggaattggcttgcactggtcatc 16201334  T
Q  227 ggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaaggttctgctcttcaagaggt 326  Q
    ||| ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||| |||| | ||||||||||||| ||||| | |||||    
T  16201335 ggataagttctgttcgtgtggactgagtagaggcatcactgctttgcttttctcgtgatcagaaacatttatgctacaaaggttctactctttaggaggt 16201434  T
Q  327 aaaca 331  Q
    |||||    
T  16201435 aaaca 16201439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 227 - 337
Target Start/End: Original strand, 13258661 - 13258771
Alignment:
Q  227 ggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaaggttctgctcttcaagaggt 326  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  13258661 ggagaagttttgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcagaaatatttcttctacaaaggttctactcttcaagaggt 13258760  T
Q  327 aaacatatgaa 337  Q
    ||||| |||||    
T  13258761 aaacacatgaa 13258771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 235 - 337
Target Start/End: Complemental strand, 17780246 - 17780144
Alignment:
Q  235 tctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaaggttctgctcttcaagaggtaaacatat 334  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||    
T  17780246 tctgttcgtgtggactgagtagaggcatcgctgctttggtttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacat 17780147  T
Q  335 gaa 337  Q
    |||    
T  17780146 gaa 17780144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 235 - 337
Target Start/End: Complemental strand, 19081547 - 19081445
Alignment:
Q  235 tctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaaggttctgctcttcaagaggtaaacatat 334  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||    
T  19081547 tctgttcgtgtggactgagtagaggcatcgctgctttggtttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacat 19081448  T
Q  335 gaa 337  Q
    |||    
T  19081447 gaa 19081445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 8 - 113
Target Start/End: Original strand, 13212225 - 13212330
Alignment:
Q  8 cgaagaatatagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 107  Q
    |||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  13212225 cgaaaaatagagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgttgttcacacaagtgattctataaatagaacccttgtgttgaa 13212324  T
Q  108 gcatta 113  Q
    ||||||    
T  13212325 gcatta 13212330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 160 - 337
Target Start/End: Original strand, 25801243 - 25801419
Alignment:
Q  160 cctagccgccgctctctaaaccttgttctctctgaatcttcgttggaattggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagagg 259  Q
    ||||| ||| |||||||||||| | |||||||||||||| ||||| ||||| ||||||||  ||| |||| ||||| ||||||||||||||| |||||||    
T  25801243 cctagtcgctgctctctaaaccctattctctctgaatctccgttgaaattgcctagcacca-tcaccggataagttatgttcgtgtggactgggtagagg 25801341  T
Q  260 catcgctgctttgctttgctcgtgatcggaaatatttcttctacaaaggttctgctcttcaagaggtaaacatatgaa 337  Q
    | ||||| | ||||||||||||| ||| |||| | |||| ||||||||||| ||| |||||||||||||||| |||||    
T  25801342 cgtcgctacattgctttgctcgtaatcagaaacaattctgctacaaaggttatgcgcttcaagaggtaaacacatgaa 25801419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 222 - 287
Target Start/End: Complemental strand, 54333264 - 54333199
Alignment:
Q  222 tcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcg 287  Q
    ||||| |||||| ||||||||||| |||||||||||| ||||| | ||||| ||||||||||||||    
T  54333264 tcatcagagaaggtctgttcgtgtagactgagtagagacatcgttactttgttttgctcgtgatcg 54333199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 300 - 337
Target Start/End: Original strand, 13691871 - 13691908
Alignment:
Q  300 ctacaaaggttctgctcttcaagaggtaaacatatgaa 337  Q
    |||||||||||||||||||||||||||||||| |||||    
T  13691871 ctacaaaggttctgctcttcaagaggtaaacacatgaa 13691908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 300 - 337
Target Start/End: Original strand, 18534826 - 18534863
Alignment:
Q  300 ctacaaaggttctgctcttcaagaggtaaacatatgaa 337  Q
    |||||||||||||||||||||||||||||||| |||||    
T  18534826 ctacaaaggttctgctcttcaagaggtaaacacatgaa 18534863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 300 - 337
Target Start/End: Complemental strand, 32055433 - 32055396
Alignment:
Q  300 ctacaaaggttctgctcttcaagaggtaaacatatgaa 337  Q
    |||||||||||||||||||||||||||||||| |||||    
T  32055433 ctacaaaggttctgctcttcaagaggtaaacacatgaa 32055396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 294; Significance: 1e-165; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 8 - 337
Target Start/End: Original strand, 22172382 - 22172711
Alignment:
Q  8 cgaagaatatagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 107  Q
    |||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22172382 cgaaaaatagagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 22172481  T
Q  108 gcattactaactttttgcgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaa 207  Q
    ||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22172482 gcattactaatcttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaa 22172581  T
Q  208 ttggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaag 307  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  22172582 ttggctagcactggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcagaaatatttcttctacaaag 22172681  T
Q  308 gttctgctcttcaagaggtaaacatatgaa 337  Q
    |||||||||||||||||||||||| |||||    
T  22172682 gttctgctcttcaagaggtaaacacatgaa 22172711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 8 - 337
Target Start/End: Original strand, 6095043 - 6095372
Alignment:
Q  8 cgaagaatatagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 107  Q
    |||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  6095043 cgaaaaatagagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgctgaccacacaagtgattctataaatagaacccttgtgttgaa 6095142  T
Q  108 gcattactaactttttgcgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaa 207  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  6095143 gcattactaactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttcttctctctgaatcttcattggaa 6095242  T
Q  208 ttggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaag 307  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  6095243 ttggctagcaccggtcatcggagaagttttgttcgtgtggactgagtagaggcatcgctgttttgctttgctcgtgatcagaaatatttcttctacaaag 6095342  T
Q  308 gttctgctcttcaagaggtaaacatatgaa 337  Q
    |||||||||||||||||||||||| |||||    
T  6095343 gttctgctcttcaagaggtaaacacatgaa 6095372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 8 - 337
Target Start/End: Original strand, 21941562 - 21941893
Alignment:
Q  8 cgaagaatatagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 107  Q
    |||| |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21941562 cgaaaaatagagaaacgcggttcaccgtaaggtacgatgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 21941661  T
Q  108 gcattactaac--tttttgcgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttgg 205  Q
    |||||||||||  |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21941662 gcattactaaccctttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttgg 21941761  T
Q  206 aattggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaa 305  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| ||||||    
T  21941762 aattagctagcactggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcagaaagatttctgctacaa 21941861  T
Q  306 aggttctgctcttcaagaggtaaacatatgaa 337  Q
    |||||||||||||||||||||||||| |||||    
T  21941862 aggttctgctcttcaagaggtaaacacatgaa 21941893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 8 - 337
Target Start/End: Original strand, 15327120 - 15327449
Alignment:
Q  8 cgaagaatatagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 107  Q
    |||| |||| |||||||||||  |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||||||||    
T  15327120 cgaaaaatagagaaacgcggtctaccgtaaggtacggtgtatttaagtgttgtcttgctgaccacacaagtgattctataaatagaacctttgtgttgaa 15327219  T
Q  108 gcattactaactttttgcgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaa 207  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||| ||||||||    
T  15327220 gcattactaaccttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagctgccgctctctaaaacttgttctctttgaatctccgttggaa 15327319  T
Q  208 ttggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaag 307  Q
    ||||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  15327320 ttggctagcaccggtcatcggagaatttatgttcatgtggactgagtagaggcatcgctgctttgctttgctcgtgatcagaaatatttcttctacaaag 15327419  T
Q  308 gttctgctcttcaagaggtaaacatatgaa 337  Q
    |||| ||||||||||||||||||| |||||    
T  15327420 gttcagctcttcaagaggtaaacacatgaa 15327449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 8 - 337
Target Start/End: Original strand, 15507489 - 15507818
Alignment:
Q  8 cgaagaatatagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 107  Q
    |||| |||| |||||||||||  |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||||||||    
T  15507489 cgaaaaatagagaaacgcggtctaccgtaaggtacggtgtatttaagtgttgtcttgctgaccacacaagtgattctataaatagaacctttgtgttgaa 15507588  T
Q  108 gcattactaactttttgcgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaa 207  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||| ||||||||    
T  15507589 gcattactaaccttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagctgccgctctctaaaacttgttctctttgaatctccgttggaa 15507688  T
Q  208 ttggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaag 307  Q
    ||||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  15507689 ttggctagcaccggtcatcggagaatttatgttcatgtggactgagtagaggcatcgctgctttgctttgctcgtgatcagaaatatttcttctacaaag 15507788  T
Q  308 gttctgctcttcaagaggtaaacatatgaa 337  Q
    |||| ||||||||||||||||||| |||||    
T  15507789 gttcagctcttcaagaggtaaacacatgaa 15507818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 8 - 337
Target Start/End: Original strand, 28548944 - 28549260
Alignment:
Q  8 cgaagaatatagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 107  Q
    |||| |||| ||||||||||| |||||||||||||| |||||||||||||||||||| || | ||| |||||||||||||||||||||||||||||||||    
T  28548944 cgaaaaatagagaaacgcggtccaccgtaaggtacgatgtatttaagtgttgtcttgctgactacataagtgattctataaatagaacccttgtgttgaa 28549043  T
Q  108 gcattactaactttttgcgagtgcttaacctaattcacaaaa-gttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttgga 206  Q
    |||| |||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||    
T  28549044 gcatgactaacattttgtgagtgcttaacctaattcacaaaaagttgtgaaaccctagccgccgctctctaaacctggttctctctgaatctctgttgga 28549143  T
Q  207 attggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaa 306  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||        ||||||  ||||||| |||||||||||||          
T  28549144 attggctagcactggtcatcggagaagttctgttcgtgtggactgagtagaggcatc--------gctttgtgcgtgatcagaaatatttcttc------ 28549229  T
Q  307 ggttctgctcttcaagaggtaaacatatgaa 337  Q
    ||||||||||||||||||||||||| |||||    
T  28549230 ggttctgctcttcaagaggtaaacacatgaa 28549260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 155 - 337
Target Start/End: Original strand, 24643993 - 24644174
Alignment:
Q  155 gaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaattggctagcaccggtcatcggagaagttctgttcgtgtggactgagt 254  Q
    ||||||| |||||| ||||||||||||| || |||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  24643993 gaaaccccagccgctgctctctaaacctagt-ctctctgaatctccgttgtaattggctagcatcggtcatcggagaagttctgttcgtgtggactgagt 24644091  T
Q  255 agaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaaggttctgctcttcaagaggtaaacatatgaa 337  Q
    ||||||||||||||| |||||||||||||||| ||||||||| || ||||||||||||||||||||||||||||||| |||||    
T  24644092 agaggcatcgctgctctgctttgctcgtgatcagaaatatttgttatacaaaggttctgctcttcaagaggtaaacacatgaa 24644174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 30 - 266
Target Start/End: Original strand, 29230335 - 29230568
Alignment:
Q  30 caccgtaaggtacggtgtatttaagtg-ttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcattactaactttt-tgcga 127  Q
    ||||||||||||  ||||| ||||||| |||  ||| || |||||||||||||||||||||||||||    ||| |||||||||||| |||||| |   |    
T  29230335 caccgtaaggtaaagtgtacttaagtgcttggtttgctgaccacacaagtgattctataaatagaac----gtgatgaagcattactgacttttgttaaa 29230430  T
Q  128 gtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaattggctagcaccggtcatcg 227  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||  ||||||||||||||||| ||||| |||||||||||||||| | | || |||     
T  29230431 gtgcttaacctaactaacaaaagttgtgaaaccctagccgccgctccttaaaccttgttctctcttaatctccgttggaattggctagta-ctgttatca 29230529  T
Q  228 gagaagttctgttcgtgtggactgagtagaggcatcgct 266  Q
    |||||||||| |||||||||||| |||||||||||||||    
T  29230530 gagaagttcttttcgtgtggactaagtagaggcatcgct 29230568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 130 - 337
Target Start/End: Complemental strand, 24796170 - 24795968
Alignment:
Q  130 gcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaattggctagcaccggtcatcgga 229  Q
    ||||||||||||||||||| ||| | ||  ||||| ||||||||||||| ||| || || ||||||||||||||| |||| |||||||||||||||||||    
T  24796170 gcttaacctaattcacaaa-gttataaa--cctagacgccgctctctaatcctagt-ctttctgaatcttcgttgaaattagctagcaccggtcatcgga 24796075  T
Q  230 gaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaaggttctgctcttcaagaggtaaa 329  Q
    ||||||||||||| ||||||| |||||||||||||||   |||||||| || | |||  ||| |||| | ||||||||||| ||| |||||||| |||||    
T  24796074 gaagttctgttcg-gtggactcagtagaggcatcgctatgttgctttgatcattatcaaaaacatttatgctacaaaggttatgcgcttcaagacgtaaa 24795976  T
Q  330 catatgaa 337  Q
    || |||||    
T  24795975 cacatgaa 24795968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 112
Target Start/End: Original strand, 24643541 - 24643624
Alignment:
Q  30 caccgtaaggtacggtgtatttaagtg-ttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcatt 112  Q
    |||||||| |||||||||||||||||| ||| |||||||  |||||||||| ||||||||||||||||||| || |||||||||    
T  24643541 caccgtaaagtacggtgtatttaagtgattggcttgttgatcacacaagtggttctataaatagaacccttatgctgaagcatt 24643624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 110
Target Start/End: Complemental strand, 32872156 - 32872123
Alignment:
Q  77 gtgattctataaatagaacccttgtgttgaagca 110  Q
    ||||||||||||| ||||||||||||||||||||    
T  32872156 gtgattctataaagagaacccttgtgttgaagca 32872123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0433 (Bit Score: 293; Significance: 1e-164; HSPs: 1)
Name: scaffold0433
Description:

Target: scaffold0433; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 13 - 337
Target Start/End: Original strand, 8010 - 8334
Alignment:
Q  13 aatatagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcatt 112  Q
    |||| ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  8010 aatagagaaacgcggtccaccgtaaggtatggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaaacatt 8109  T
Q  113 actaactttttgcgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaattggc 212  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  8110 actaactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaactttgttctctctgaatcttcgttggaattggc 8209  T
Q  213 tagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaaggttct 312  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  8210 tagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcagaaatatttcttctacaaaggttct 8309  T
Q  313 gctcttcaagaggtaaacatatgaa 337  Q
    ||||||||||||||||||| |||||    
T  8310 gctcttcaagaggtaaacacatgaa 8334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390 (Bit Score: 293; Significance: 1e-164; HSPs: 2)
Name: scaffold0390
Description:

Target: scaffold0390; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 13 - 337
Target Start/End: Complemental strand, 6214 - 5890
Alignment:
Q  13 aatatagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcatt 112  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  6214 aatagagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccatacaagtgattctataaatagaacccttgtgttgaagcatt 6115  T
Q  113 actaactttttgcgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaattggc 212  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6114 actaactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaattggc 6015  T
Q  213 tagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaaggttct 312  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||    
T  6014 tagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcagaaagatttctgctacaaaggttct 5915  T
Q  313 gctcttcaagaggtaaacatatgaa 337  Q
    |||||||| |||||||||| |||||    
T  5914 gctcttcaggaggtaaacacatgaa 5890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #2
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 13 - 337
Target Start/End: Complemental strand, 13230 - 12906
Alignment:
Q  13 aatatagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcatt 112  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13230 aatagagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcatt 13131  T
Q  113 actaactttttgcgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaattggc 212  Q
    |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13130 actaactttttgtgagtgcttaacctaattcacaacagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaattggc 13031  T
Q  213 tagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaaggttct 312  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| |||||| |||||||||||||    
T  13030 tagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatgagaaagatttctgctacaaaggttct 12931  T
Q  313 gctcttcaagaggtaaacatatgaa 337  Q
    ||||||||||||||||||| |||||    
T  12930 gctcttcaagaggtaaacacatgaa 12906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 290; Significance: 1e-163; HSPs: 2)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 290; E-Value: 1e-163
Query Start/End: Original strand, 8 - 337
Target Start/End: Complemental strand, 10522 - 10193
Alignment:
Q  8 cgaagaatatagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 107  Q
    |||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10522 cgaaaaatagagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 10423  T
Q  108 gcattactaactttttgcgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaa 207  Q
     ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  10422 acatgactaactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatctccgttggaa 10323  T
Q  208 ttggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaag 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  10322 ttggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcagaaatatttcttctacaaag 10223  T
Q  308 gttctgctcttcaagaggtaaacatatgaa 337  Q
    ||||||||| |||||||||||||| |||||    
T  10222 gttctgctcgtcaagaggtaaacacatgaa 10193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #2
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 8 - 337
Target Start/End: Complemental strand, 1631 - 1300
Alignment:
Q  8 cgaagaatatagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaa--tagaacccttgtgttg 105  Q
    |||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  1631 cgaaaaatagagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaaaatagaacccttgtgttg 1532  T
Q  106 aagcattactaactttttgcgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttgg 205  Q
    || ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  1531 aaacatgactaactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatctccgttgg 1432  T
Q  206 aattggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaa 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  1431 aattggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcagaaatatttcttctacaa 1332  T
Q  306 aggttctgctcttcaagaggtaaacatatgaa 337  Q
    ||||||||||| |||||||||||||| |||||    
T  1331 aggttctgctcgtcaagaggtaaacacatgaa 1300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 281; Significance: 1e-157; HSPs: 14)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 8 - 337
Target Start/End: Original strand, 29328681 - 29329014
Alignment:
Q  8 cgaagaatatagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaa----tagaacccttgtgt 103  Q
    |||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||||||||||||||    
T  29328681 cgaaaaatagagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaaaaaatagaacccttgtgt 29328780  T
Q  104 tgaagcattactaactttttgcgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgtt 203  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29328781 tgaagcattactaactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgtt 29328880  T
Q  204 ggaattggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctac 303  Q
    ||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  29328881 ggaattggctagcaccggtcatcagagaagttatgttcgtgtgaactgagtagaggcatcgctgctttgctttgctcgtgatcagaaatatttcttctac 29328980  T
Q  304 aaaggttctgctcttcaagaggtaaacatatgaa 337  Q
    |||||||||||||||||||||||||||| |||||    
T  29328981 aaaggttctgctcttcaagaggtaaacacatgaa 29329014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 8 - 337
Target Start/End: Complemental strand, 11535372 - 11535043
Alignment:
Q  8 cgaagaatatagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 107  Q
    |||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11535372 cgaaaaatagagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 11535273  T
Q  108 gcattactaactttttgcgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaa 207  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  11535272 gcattactaactttttgttagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctctaaaccttgttctctcttaatcttcgttggaa 11535173  T
Q  208 ttggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaag 307  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||| ||||||||    
T  11535172 ttggctagcaccgatcatcggagaagttctgttcgtgtggactgagtagagacatcgctgctttgctttgctcgtgatcagaaagatttctactacaaag 11535073  T
Q  308 gttctgctcttcaagaggtaaacatatgaa 337  Q
    |||||||||||||||||||||||| |||||    
T  11535072 gttctgctcttcaagaggtaaacacatgaa 11535043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 8 - 337
Target Start/End: Complemental strand, 11542290 - 11541961
Alignment:
Q  8 cgaagaatatagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 107  Q
    |||| |||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11542290 cgaaaaatagagaaacgcggtccaccgtaaggtacggtgtatttaagcgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 11542191  T
Q  108 gcattactaactttttgcgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaa 207  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  11542190 gcattactaactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgttctctaaaccttgttctctcttaatcttcgttggaa 11542091  T
Q  208 ttggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaag 307  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| |||||| ||||||||    
T  11542090 ttggctagcaccgatcaccggagaagttctgttcgtgtggactgagtagaggtatcgctgctttgctttgctcgtgatcagaaagatttctactacaaag 11541991  T
Q  308 gttctgctcttcaagaggtaaacatatgaa 337  Q
    |||||||||||||||||||||||| |||||    
T  11541990 gttctgctcttcaagaggtaaacacatgaa 11541961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 8 - 337
Target Start/End: Original strand, 12751756 - 12752085
Alignment:
Q  8 cgaagaatatagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 107  Q
    |||| |||| |||||||| ||  |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| ||||| ||||||||||    
T  12751756 cgaaaaatagagaaacgcagtctaccgtaaggtacggtgtatttaagtgttgtcttgctgaccacacaagtgattctataaatggaaccattgtgttgaa 12751855  T
Q  108 gcattactaactttttgcgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaa 207  Q
    ||||||||||||||||| ||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||    
T  12751856 gcattactaactttttgtgagtgcttaacctcatttacaaaagttgtgaaaccgtagccgccgctctctaaaccttgttctctctaaatctccgttggaa 12751955  T
Q  208 ttggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaag 307  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  12751956 ttggctagcaccggtcatcggagaagttctgttcgtgtggacggagtagaggcatcgctgctttgctttgctcgtgatcagaaatatttcttctacaaag 12752055  T
Q  308 gttctgctcttcaagaggtaaacatatgaa 337  Q
    |||||||||||||||||||||||| |||||    
T  12752056 gttctgctcttcaagaggtaaacacatgaa 12752085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 8 - 331
Target Start/End: Original strand, 12739439 - 12739762
Alignment:
Q  8 cgaagaatatagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 107  Q
    |||| |||| |||||||||||  | ||||||||||  |||||||||||||||||||| || |||||||||||||||||||||||||||| |||| ||| |    
T  12739439 cgaaaaatagagaaacgcggtctatcgtaaggtacaatgtatttaagtgttgtcttgctgaccacacaagtgattctataaatagaacctttgttttgta 12739538  T
Q  108 gcattactaactttttgcgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaa 207  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||    
T  12739539 gcattactaactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccgtagccgccgctctctaaaccttgttctctcttaatctccgttggaa 12739638  T
Q  208 ttggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaag 307  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  12739639 ttggctagcaccggtcatcggagaagttctgtttttgtggactgagtagaggcatcgctgctttgctttgctcgtgatcagaaatatttcttctacaaag 12739738  T
Q  308 gttctgctcttcaagaggtaaaca 331  Q
    ||||||||||||||||||||||||    
T  12739739 gttctgctcttcaagaggtaaaca 12739762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 13 - 337
Target Start/End: Original strand, 15153370 - 15153693
Alignment:
Q  13 aatatagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcatt 112  Q
    |||| ||||||||||| |||||||||||||||||| |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  15153370 aatagagaaacgcggtccaccgtaaggtacggtgtgtttaagtgttgtcttgctgaccacacaagtgattctataaatagaacccttgtgttgaagcatt 15153469  T
Q  113 actaactttttgcgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaac-cttgttctctctgaatcttcgttggaattgg 211  Q
    || ||||||||| ||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||| ||||||||||||    
T  15153470 acaaactttttgtgagtgctaaacctcattcacaaaagttgtgaaa-cctagccgccgctctctaaacatttgttctctctgaatctccgttggaattgg 15153568  T
Q  212 ctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaaggttc 311  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||    
T  15153569 ctagcaccggtcatcggagaagttttgttcgtgtggactgagtagaggcatcgcttctttgctttgctcgtgatcagaaatattt-ttctacaaaggttc 15153667  T
Q  312 tgctcttcaagaggtaaacatatgaa 337  Q
    |||||||||||||||||||| |||||    
T  15153668 tgctcttcaagaggtaaacacatgaa 15153693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 13 - 337
Target Start/End: Original strand, 18561935 - 18562259
Alignment:
Q  13 aatatagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcatt 112  Q
    |||| ||||||||||| |||||||| ||||||||||| |||||||||||||| || | |||||||| ||||||||||||||||||||||||||||| |||    
T  18561935 aatagagaaacgcggtccaccgtaaagtacggtgtatctaagtgttgtcttgctgactacacaagtaattctataaatagaacccttgtgttgaagtatt 18562034  T
Q  113 actaactttttgcgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaattggc 212  Q
    |||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||    
T  18562035 actaactttttgtgagtgctaaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttcttctctctgaatctccgttggaattggc 18562134  T
Q  213 tagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaaggttct 312  Q
    ||||||||||||||||||||||| ||||||||| |||| |||||||||||||||| ||||||||||||||||||  ||||| |||| |||||||||||||    
T  18562135 tagcaccggtcatcggagaagttatgttcgtgtagactaagtagaggcatcgctgttttgctttgctcgtgatcaaaaataattctactacaaaggttct 18562234  T
Q  313 gctcttcaagaggtaaacatatgaa 337  Q
    ||||||||||||||||||| |||||    
T  18562235 gctcttcaagaggtaaacaaatgaa 18562259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 116 - 337
Target Start/End: Complemental strand, 2653190 - 2652969
Alignment:
Q  116 aactttttgcgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaattggctag 215  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||||||    
T  2653190 aactttttatgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgattctctgttggaattggctag 2653091  T
Q  216 caccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaaggttctgct 315  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||    
T  2653090 caccagtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcagaaagatttctgctacaaaggttctgct 2652991  T
Q  316 cttcaagaggtaaacatatgaa 337  Q
    |||||||||||||||| |||||    
T  2652990 cttcaagaggtaaacacatgaa 2652969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 44 - 337
Target Start/End: Original strand, 9978775 - 9979054
Alignment:
Q  44 gtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcattactaactttttgcgagtgcttaacctaattc 143  Q
    ||||| ||||||||||||||| || |||||| | ||||||||||||||||||||||||               || ||||| ||||||||||||||||||    
T  9978775 gtgtacttaagtgttgtcttgctgaccacacgattgattctataaatagaacccttgtt--------------accttttgtgagtgcttaacctaattc 9978860  T
Q  144 acaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaattggctagcaccggtcatcggagaagttctgttcgt 243  Q
     ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  9978861 gcaaaagttgtgaaaccctagccgccgctctctaaaccttcttctctctgaatcttcgttggaattggctagcaccggtcatcgaaaaagttctgttcgt 9978960  T
Q  244 gtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaaggttctgctcttcaagaggtaaacatatgaa 337  Q
    ||||||| |||||||||||||||  |||||||||||||||||| |||||| |||| |||||||||||||||||||||||||| ||||| |||||    
T  9978961 gtggactaagtagaggcatcgctattttgctttgctcgtgatcagaaatagttctactacaaaggttctgctcttcaagaggaaaacacatgaa 9979054  T

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Target: chr7; HSP #10
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 8 - 199
Target Start/End: Complemental strand, 11557377 - 11557192
Alignment:
Q  8 cgaagaatatagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 107  Q
    |||| |||| |||||||| || |||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||    
T  11557377 cgaaaaatagagaaacgcagtccaccgtaaggtacgttgtatttaagtgttgtcttgctgaccacacaagtgattctataaatagaacccttatgttgaa 11557278  T
Q  108 gcattactaactttttgcgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatctt 199  Q
    ||| |      |||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11557277 gcact------ttttggtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatctt 11557192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 8 - 158
Target Start/End: Complemental strand, 24850869 - 24850719
Alignment:
Q  8 cgaagaatatagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 107  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||| |||||||    
T  24850869 cgaaaaatagagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgttttgctgaccacacaagtgattctataaatagaacccttatgttgaa 24850770  T
Q  108 gcattactaactttttgcgagtgcttaacctaattcacaaaagttgtgaaa 158  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  24850769 gcattacgaactttttgggagtgcttaacctaattcacaaaagttgtgaaa 24850719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 30 - 166
Target Start/End: Original strand, 13393080 - 13393217
Alignment:
Q  30 caccgtaaggtacggtgtatttaagtg-ttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcattactaactttttgcgag 128  Q
    |||||||||||||| |||| ||||||| |||  ||| || |||||||||||||||||||||||||||||||||| |||| ||||||  | |||||| ||     
T  13393080 caccgtaaggtacgatgtacttaagtgcttggtttgctgaccacacaagtgattctataaatagaacccttgtgctgaaacattacatagtttttgtgaa 13393179  T
Q  129 tgcttaacctaattcacaaaagttgtgaaaccctagcc 166  Q
      |||||||||||| |||||||||||||||||||||||    
T  13393180 cacttaacctaatttacaaaagttgtgaaaccctagcc 13393217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 239 - 337
Target Start/End: Complemental strand, 18256897 - 18256799
Alignment:
Q  239 ttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaaggttctgctcttcaagaggtaaacatatgaa 337  Q
    |||||||||||| |||| ||| |||||| | ||||||||||||||||| ||||||  ||| ||||||| ||||| |||||||||||| ||||| |||||    
T  18256897 ttcgtgtggactaagtataggtatcgctacgttgctttgctcgtgatcagaaataactctactacaaaagttcttctcttcaagaggcaaacacatgaa 18256799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 112
Target Start/End: Original strand, 30926078 - 30926130
Alignment:
Q  60 tcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcatt 112  Q
    |||||||| |||||||| || |||||||||||||||| || || |||||||||    
T  30926078 tcttgttgaccacacaaatggttctataaatagaacctttatgctgaagcatt 30926130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 271; Significance: 1e-151; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 8 - 337
Target Start/End: Complemental strand, 24694768 - 24694441
Alignment:
Q  8 cgaagaatatagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 107  Q
    |||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  24694768 cgaaaaatagagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattccataaatagaacccttgtgttgaa 24694669  T
Q  108 gcattactaactttttgcgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaa 207  Q
    ||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||    
T  24694668 gcattactaactttttggg--tgcttaacctaattcacaaaagttgtgaaaccctagccgccgttctctaaacctcgttctctctgaatctccgttggaa 24694571  T
Q  208 ttggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaag 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||    
T  24694570 ttggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcagaaagatttctgctacaaag 24694471  T
Q  308 gttctgctcttcaagaggtaaacatatgaa 337  Q
    |||||||||||||||||||||||| |||||    
T  24694470 gttctgctcttcaagaggtaaacacatgaa 24694441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 8 - 337
Target Start/End: Complemental strand, 24701532 - 24701210
Alignment:
Q  8 cgaagaatatagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 107  Q
    |||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  24701532 cgaaaaatagagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattccataaatagaacccttgtgttgaa 24701433  T
Q  108 gcattactaactttttgcgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaa 207  Q
    ||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||    
T  24701432 gcattactaactttttggg--tgcttaacctaattcacaaaagttgtgaaaccctagccgccgttctctaaacctcgttctctctgaatctccgttggaa 24701335  T
Q  208 ttggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaag 307  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||     ||||||||||| |||| |||||| ||||||||    
T  24701334 ttggctagcaccggtcatcggagaagttctattcgtgtggactgagtagaggcatcgctgctt-----tgctcgtgatcagaaagatttctgctacaaag 24701240  T
Q  308 gttctgctcttcaagaggtaaacatatgaa 337  Q
    |||||||||||||||||||||||| |||||    
T  24701239 gttctgctcttcaagaggtaaacacatgaa 24701210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 18 - 337
Target Start/End: Complemental strand, 18565766 - 18565438
Alignment:
Q  18 agaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttg-----aagcatt 112  Q
    ||||||||||| ||| |||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||     |||||||    
T  18565766 agaaacgcggtccactgtaaggcacggtgtatttaagtgttgtcttgctgaccacacaagtgattctataaatagaacccttgtgttgtgttgaagcatt 18565667  T
Q  113 actaacttttt-gcgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaattgg 211  Q
    || |||||||| | ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||||| ||||||||||||    
T  18565666 acaaacttttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccggtctctaaaccttgttctatttgaatctccgttggaattgg 18565567  T
Q  212 ctagcaccggt--catcggagaagttctgttcgtgtggactgagtagaggca--tcgctgctttgctttgctcgtgatcggaaatatttcttctacaaag 307  Q
    |||||||||||  |||| |||||||| |||| ||||||||||||||||||||  ||||||||||||||||||||||||| ||||||||| ||||||||||    
T  18565566 ctagcaccggtcacatcagagaagttttgtttgtgtggactgagtagaggcatctcgctgctttgctttgctcgtgatcagaaatattt-ttctacaaag 18565468  T
Q  308 gttctgctcttcaagaggtaaacatatgaa 337  Q
    |||||||||||||||||||||||| |||||    
T  18565467 gttctgctcttcaagaggtaaacacatgaa 18565438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 8 - 306
Target Start/End: Complemental strand, 19713808 - 19713512
Alignment:
Q  8 cgaagaatatagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 107  Q
    |||| |||| ||||||||||| ||||||||||||| || ||||||||||||||||||    |||||||||||||||||||||||||||||||||||||||    
T  19713808 cgaaaaatagagaaacgcggtccaccgtaaggtacagtatatttaagtgttgtcttgca--ccacacaagtgattctataaatagaacccttgtgttgaa 19713711  T
Q  108 gcattactaactttttgcgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaa 207  Q
    |||| |||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||    
T  19713710 gcataactaacttttagtgagtgcttaacctaattcacaaaagttgtgaaaccctagctgccgctctctaaacctttttctctctgaatctccgttggaa 19713611  T
Q  208 ttggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaa 306  Q
    |||||||||||| ||||||||||||||||||||| |||||||| ||||||||||||| || |||||||||||||||||| |||||| |||| |||||||    
T  19713610 ttggctagcaccagtcatcggagaagttctgttcatgtggactaagtagaggcatcgttgttttgctttgctcgtgatcagaaataattctactacaaa 19713512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 8 - 260
Target Start/End: Complemental strand, 19706482 - 19706230
Alignment:
Q  8 cgaagaatatagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 107  Q
    |||| |||| ||||||||||| ||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  19706482 cgaaaaatagagaaacgcggtccaccgtaagatacggtatatttaagtgttgtcttgttgaccacacaagtgattctataaatagaacccttatgttgaa 19706383  T
Q  108 gcattactaactttttgcgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaa 207  Q
    |||| |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| |  |||| ||    
T  19706382 gcataactaacttttagtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttcttctctctaaatatctgttgaaa 19706283  T
Q  208 ttggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggc 260  Q
    |||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  19706282 ttggctagcaccggtcatcggagaagttatgttcgtgtggactaagtagaggc 19706230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 69 - 337
Target Start/End: Complemental strand, 938795 - 938531
Alignment:
Q  69 ccacacaagtgattctataaatagaacccttgtgttgaagcattactaactttttgcgagtgcttaacctaattcacaaaagttgtgaaaccctagccgc 168  Q
    |||||||||||||| ||||||| |||||||||||| |||| ||  || | || |||  |||||| ||||||||||||||| ||| | ||  |||||||||    
T  938795 ccacacaagtgattttataaattgaacccttgtgtggaaggat--cttagttgttga-agtgctaaacctaattcacaaa-gttataaa--cctagccgc 938702  T
Q  169 cgctctctaaaccttgttctctctgaatcttcgttggaattggctagcaccggtcatc---ggagaagttctgttcgtgtggactgagtagaggcatcgc 265  Q
    ||||||||||||||| |||||||| ||||| ||||||||| |||||||||||||||||   | |||||||||||||||||||| |||||||| |||||||    
T  938701 cgctctctaaaccttattctctct-aatctccgttggaatcggctagcaccggtcatcatcgtagaagttctgttcgtgtggattgagtagaagcatcgc 938603  T
Q  266 tgctttgctttgctcgtgatcggaaatatttcttctacaaaggttctgctcttcaagaggtaaacatatgaa 337  Q
    | | ||| |||| | ||||||||||| | |||| || |||| ||| |||  ||||||||||||||| |||||    
T  938602 tacgttgttttgtttgtgatcggaaacaattctgctgcaaaagttttgcgtttcaagaggtaaacacatgaa 938531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 235 - 322
Target Start/End: Original strand, 39539653 - 39539740
Alignment:
Q  235 tctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaaggttctgctcttcaag 322  Q
    |||||| ||||||||||||||||| ||||||| | |||||||||| |||||| ||||   |||| ||||||||||||||| |||||||    
T  39539653 tctgtttgtgtggactgagtagagacatcgctacgttgctttgcttgtgatcagaaactattctgctacaaaggttctgcacttcaag 39539740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 107
Target Start/End: Original strand, 39539549 - 39539583
Alignment:
Q  73 acaagtgattctataaatagaacccttgtgttgaa 107  Q
    ||||||| |||||||||||||||||||||||||||    
T  39539549 acaagtggttctataaatagaacccttgtgttgaa 39539583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 254; Significance: 1e-141; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 8 - 337
Target Start/End: Complemental strand, 22791143 - 22790814
Alignment:
Q  8 cgaagaatatagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 107  Q
    |||| |||| |||||||| || ||| ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| ||| |    
T  22791143 cgaaaaatagagaaacgcagtccactgtaaggtacggtgtatttaagtgttgtcttgctgaccacacaagtgattctataaatagaacccttgttttgta 22791044  T
Q  108 gcattactaactttttgcgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaa 207  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||||||| ||| ||||    
T  22791043 gcattactaactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctatactttgttctctttgaatctccgtgggaa 22790944  T
Q  208 ttggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaag 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||    
T  22790943 ttggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgcttctttgctttgctcgtcatcagaaatatttcttctacaaag 22790844  T
Q  308 gttctgctcttcaagaggtaaacatatgaa 337  Q
    |||||||||||||||||||||||| |||||    
T  22790843 gttctgctcttcaagaggtaaacacatgaa 22790814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 8 - 186
Target Start/End: Complemental strand, 21329554 - 21329374
Alignment:
Q  8 cgaagaatatagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaa--tagaacccttgtgttg 105  Q
    |||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  21329554 cgaaaaatagagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaaaatagaacccttgtgttg 21329455  T
Q  106 aagcattactaactttttgcgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgtt 186  Q
    || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  21329454 aaacattactaactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaactttgtt 21329374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 84 - 331
Target Start/End: Original strand, 41664739 - 41664985
Alignment:
Q  84 tataaatagaacccttgtgttgaagcattactaactttttgc-gagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaacct 182  Q
    |||||||| ||||||||||||||||||||| ||| ||| ||  ||    |||||||||||||||||||||||||||||||||||| || |||||||||||    
T  41664739 tataaata-aacccttgtgttgaagcattattaaatttatgttgaacatttaacctaattcacaaaagttgtgaaaccctagccgtcgttctctaaacct 41664837  T
Q  183 tgttctctctgaatcttcgttggaattggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgt 282  Q
    ||||||||| |||||| ||||||||||||||||||||| ||||||| ||| ||||||||||||||||| |||||| |||||||| | ||||| |||||||    
T  41664838 tgttctctccgaatctccgttggaattggctagcaccgatcatcggggaa-ttctgttcgtgtggactaagtagaagcatcgctacgttgctatgctcgt 41664936  T
Q  283 gatcggaaatatttcttctacaaaggttctgctcttcaagaggtaaaca 331  Q
    |||| |||| | |||| ||||||| ||||||||||||||||||||||||    
T  41664937 gatcagaaacaattctactacaaatgttctgctcttcaagaggtaaaca 41664985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 81 - 337
Target Start/End: Original strand, 18620805 - 18621062
Alignment:
Q  81 ttctataaatagaacccttgtgttgaagcattactaactttttgc-gagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaa 179  Q
    |||||||||||||||||||||| | |||||||||| ||||||||  ||   |||||||||||||| | ||||||||||| |||||  ||| |||||||||    
T  18620805 ttctataaatagaacccttgtgctaaagcattactgactttttgttgaacacttaacctaattcaaagaagttgtgaaatcctagttgccactctctaaa 18620904  T
Q  180 ccttgttctctctgaatcttcgttggaattggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgct 279  Q
    | ||||||| |||||||||  ||||||||||||||||||| |||||||||||| ||||||||||||||||||||| ||| |||| |    ||||||| ||    
T  18620905 ctttgttctatctgaatctctgttggaattggctagcaccagtcatcggagaaattctgttcgtgtggactgagtggagacatcaccatgttgctttact 18621004  T
Q  280 cgtgatcggaaatatttcttctacaaaggttctgctcttcaagaggtaaacatatgaa 337  Q
    |||||||  ||| | |||| ||| ||||||| |||| ||||||||||||||| |||||    
T  18621005 cgtgatcaaaaacaattctgctataaaggttatgcttttcaagaggtaaacacatgaa 18621062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 186 - 331
Target Start/End: Original strand, 27353433 - 27353578
Alignment:
Q  186 tctctctgaatcttcgttggaattggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgat 285  Q
    ||||||||||||| || ||||||||||| | |||||||||| |||||||||| | |||||||||||||||||||||||||| | ||||||||||||||||    
T  27353433 tctctctgaatctccgctggaattggctcgtaccggtcatcagagaagttctctacgtgtggactgagtagaggcatcgctacgttgctttgctcgtgat 27353532  T
Q  286 cggaaatatttcttctacaaaggttctgctcttcaagaggtaaaca 331  Q
    | ||||   |||  |||||||| |||||| ||||||||||||||||    
T  27353533 cagaaactattccgctacaaagattctgcgcttcaagaggtaaaca 27353578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 107
Target Start/End: Original strand, 27353286 - 27353364
Alignment:
Q  30 caccgtaaggtacggtgtatttaagtg-ttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 107  Q
    ||||||||||||||||||| ||||||| ||| |||| || ||||||||| | ||||||||||||||| |||||| ||||    
T  27353286 caccgtaaggtacggtgtaattaagtgattgacttgatgaccacacaaggggttctataaatagaacacttgtgctgaa 27353364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 103
Target Start/End: Original strand, 18822934 - 18822967
Alignment:
Q  70 cacacaagtgattctataaatagaacccttgtgt 103  Q
    |||||||| |||||||||||||||||||||||||    
T  18822934 cacacaagggattctataaatagaacccttgtgt 18822967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1199 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: scaffold1199
Description:

Target: scaffold1199; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 8 - 337
Target Start/End: Original strand, 17 - 351
Alignment:
Q  8 cgaagaatatagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 107  Q
    |||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||| ||||||||||||||||||||||||||||    
T  17 cgaaaaatagagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgctgaccacacaagttattctataaatagaacccttgtgttgaa 116  T
Q  108 gcattactaactttttgc-----gagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgt 202  Q
    ||||||  |||||||||      ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| |||    
T  117 gcattatgaactttttgaaaagtgagtgcttaacctaattcacaaaagttgtgaaaccatagccgccgctatctaaaccttgttctctctgaatctccgt 216  T
Q  203 tggaattggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttcta 302  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||||||||    
T  217 tggaattggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagagacatcgctgctttgctttgcttgtgatcagaaatatttcttcta 316  T
Q  303 caaaggttctgctcttcaagaggtaaacatatgaa 337  Q
    ||||||||||||||||||||||||||||| |||||    
T  317 caaaggttctgctcttcaagaggtaaacacatgaa 351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 18 - 337
Target Start/End: Original strand, 19219 - 19539
Alignment:
Q  18 agaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcattactaa 117  Q
    ||||||||||| ||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  19219 agaaacgcggtccactggaaggtacggtgtatttaagtgttgtcttgttgcccacacaagtgattctataaatagaacccttgtgttgaaacattactaa 19318  T
Q  118 ctttttgcga-gtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaattggctagc 216  Q
    ||||||| || |||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||||| ||||| |||||||||||    
T  19319 ctttttgtgaagtgcttaacctaattcacaaaagttgtgaaaccctagccgccactctctaaacgtagttctctctgaatctccgttgtaattggctagc 19418  T
Q  217 accggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaaggttctgctc 316  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||    
T  19419 accggtcatcggagaagttctgttcatgtggactgagtagaggcatcgctgctttgctttgctcgtgatcagaaatatttcttctacaaagattgtgctc 19518  T
Q  317 ttcaagaggtaaacatatgaa 337  Q
    ||||| ||||||||| |||||    
T  19519 ttcaaaaggtaaacacatgaa 19539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 18 - 337
Target Start/End: Original strand, 6429 - 6754
Alignment:
Q  18 agaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagcattactaa 117  Q
    |||||| |||| |||||||| ||| |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| || ||    
T  6429 agaaactcggtccaccgtaaagtatggtgtatttaagtgttgtcttgctgaccacacaagtgattctataaatagaacccttgtgttgaagcatgacgaa 6528  T
Q  118 ctttttgcg------agtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaattgg 211  Q
    ||||||         ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||    
T  6529 cttttttttttttttagtgcttaacctaattcacaaaagtggtgaaaccctagccgccgctctctaaaccttgttctctttgaatctccattggaattgg 6628  T
Q  212 ctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaaggttc 311  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||| |||||| |||| ||||||||||||    
T  6629 ctagcaccagtcatcggagaagttctgttcgtgtggactaagtagaggcatcgctattttgctttgctcgtgatctgaaataattctactacaaaggttc 6728  T
Q  312 tgctcttcaagaggtaaacatatgaa 337  Q
    |||||||  || |||||||| |||||    
T  6729 tgctctttgagtggtaaacacatgaa 6754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 8 - 337
Target Start/End: Complemental strand, 229701 - 229368
Alignment:
Q  8 cgaagaatatagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaa 107  Q
    |||| |||| ||||| | ||| ||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||| |||||||    
T  229701 cgaaaaatagagaaatgtggtccaccgtaaggtacggtgtatttaagtgttttcttgctgaccacacaagtgattctataaatagaacccttctgttgaa 229602  T
Q  108 gcattactaactttttgcg----agtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgtt 203  Q
    |||| || ||||||||       ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| | ||    
T  229601 gcatgacgaacttttttttttttagtgcttaacctaattcacaaaagtggtgaaaccctagccgccgctctctaaaccttgttctctttgaatctccatt 229502  T
Q  204 ggaattggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctac 303  Q
    | || ||||||||||||||||||||||||||||||||| |||||||| |||| ||||||||||  |||||||||||||||||| |||||| ||||  |||    
T  229501 gaaactggctagcaccggtcatcggagaagttctgttcatgtggactaagtataggcatcgctattttgctttgctcgtgatcagaaataattctagtac 229402  T
Q  304 aaaggttctgctcttcaagaggtaaacatatgaa 337  Q
    |||||||||||||||| ||||||||||| |||||    
T  229401 aaaggttctgctcttctagaggtaaacacatgaa 229368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 142; Significance: 2e-74; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 184 - 337
Target Start/End: Original strand, 4313 - 4466
Alignment:
Q  184 gttctctctgaatcttcgttggaattggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtg 283  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4313 gttctctctgaatctccgttggaattggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtg 4412  T
Q  284 atcggaaatatttcttctacaaaggttctgctcttcaagaggtaaacatatgaa 337  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  4413 atcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaa 4466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 142; Significance: 2e-74; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 69 - 337
Target Start/End: Complemental strand, 107497 - 107228
Alignment:
Q  69 ccacacaagtgattctataaatagaacccttgtgttgaagcattactaactttttgc-gagtgcttaacctaattcacaaaagttgtgaaaccctagccg 167  Q
    ||||||||||| |||| ||||||||||||||||| |||||||||||||| ||||||  ||   |||||  ||||||||||||||||||||||||||||||    
T  107497 ccacacaagtggttctgtaaatagaacccttgtgctgaagcattactaagtttttgttgaacacttaagataattcacaaaagttgtgaaaccctagccg 107398  T
Q  168 ccgctctctaaaccttgttctctctgaatcttcgttggaattggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctg 267  Q
    || |||| |||| |||||||||||||||||| ||||||||||||||  ||| |||||||||||||||||||||||| ||||||  |||||||||| |||     
T  107397 ccactctttaaatcttgttctctctgaatctccgttggaattggctgacactggtcatcggagaagttctgttcgtttggactatgtagaggcattgcta 107298  T
Q  268 ctttgctttgctcgtgatcggaaatatttcttctacaaaggttctgctcttcaagaggtaaacatatgaa 337  Q
    | |||||||||| ||||||| ||| | |||||||||||||||| |||||||| ||||||||||| |||||    
T  107297 cgttgctttgcttgtgatcgtaaacaattcttctacaaaggttatgctcttccagaggtaaacacatgaa 107228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1303 (Bit Score: 127; Significance: 2e-65; HSPs: 2)
Name: scaffold1303
Description:

Target: scaffold1303; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 155 - 337
Target Start/End: Complemental strand, 1143 - 962
Alignment:
Q  155 gaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaattggctagcaccggtcatcggagaagttctgttcgtgtggactgagt 254  Q
    |||||||||  || |||||||||||| | || |||||||||||  |||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  1143 gaaaccctaatcgtcgctctctaaacttagt-ctctctgaatcaccgttggaattggctagcaccggtcatcggagaagttatgttcgtgtggactgagt 1045  T
Q  255 agaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaaggttctgctcttcaagaggtaaacatatgaa 337  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  1044 agagacatcgctgctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgttcttcaagaggtaaacacatgaa 962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1303; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 102
Target Start/End: Complemental strand, 1270 - 1180
Alignment:
Q  13 aatatagaaacgcggttcaccgtaaggtacggtgtatttaagtg-ttgtcttgttgtccacacaagtgattctataaatagaacccttgtg 102  Q
    |||| ||||| ||||| || ||||||||||||||| ||||| || ||| |||| || |||| |||||| ||||||||||||||| ||||||    
T  1270 aatagagaaatgcggtccagcgtaaggtacggtgtgtttaattgattgacttgatgaccacgcaagtggttctataaatagaacacttgtg 1180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 124; Significance: 1e-63; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 174 - 337
Target Start/End: Original strand, 26276 - 26439
Alignment:
Q  174 tctaaaccttgttctctctgaatcttcgttggaattggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgc 273  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  26276 tctaaactttgttctctctgaatctttgttggaattggctagcaccggtcatcggagaagttttgttcgtgtggactgagtagaggcatcgctgctttgc 26375  T
Q  274 tttgctcgtgatcggaaatatttcttctacaaaggttctgctcttcaagaggtaaacatatgaa 337  Q
    ||||||| ||||  |||| |||| | |||||||||||||||||||||||||||||||| |||||    
T  26376 tttgctcatgataagaaaaatttatactacaaaggttctgctcttcaagaggtaaacacatgaa 26439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 116; Significance: 6e-59; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 200 - 331
Target Start/End: Complemental strand, 29302 - 29171
Alignment:
Q  200 cgttggaattggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttctt 299  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||     
T  29302 cgttggaattggctagcaccggccatcggagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcagaaagatttctg 29203  T
Q  300 ctacaaaggttctgctcttcaagaggtaaaca 331  Q
    ||||||||||||||||||||||||||||||||    
T  29202 ctacaaaggttctgctcttcaagaggtaaaca 29171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0502 (Bit Score: 94; Significance: 8e-46; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 69 - 337
Target Start/End: Original strand, 7 - 272
Alignment:
Q  69 ccacacaagtgattctataaatagaacccttgtgttgaagcattactaactttttgcgagtgcttaacctaattcacaaaagttgtgaaaccctagccgc 168  Q
    ||||||||||| ||||||||||||||| |||||| | ||||||  |  |  |||||  ||||||| |||||||||| |||||| |||||||  || ||||    
T  7 ccacacaagtggttctataaatagaactcttgtgctaaagcatgtccga--ttttga-agtgctttacctaattcataaaagtggtgaaacagtatccgc 103  T
Q  169 cgctctctaaaccttgttctctctgaatcttcgttggaattggctagcaccggtcatcggagaagttctgttcgtgtggactgagtagaggcatcgctgc 268  Q
    ||||||||||||||||||||||||| |||| ||||| | |||||||||||| |||||  |||||||| ||||||| |||||||||||||| |||||||      
T  104 cgctctctaaaccttgttctctctggatctccgttgaagttggctagcaccagtcattagagaagttatgttcgtatggactgagtagagacatcgctat 203  T
Q  269 tttgctttgctcgtgatcggaaatatttcttctacaaaggttctgctcttcaagaggtaaacatatgaa 337  Q
     ||  |||||| |||||  |||| |||| | ||||||||||||| ||||||||||| |||||| |||||    
T  204 gtttgtttgcttgtgattagaaacatttttgctacaaaggttctactcttcaagagataaacacatgaa 272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0657 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0657
Description:

Target: scaffold0657; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 264 - 337
Target Start/End: Original strand, 3870 - 3943
Alignment:
Q  264 gctgctttgctttgctcgtgatcggaaatatttcttctacaaaggttctgctcttcaagaggtaaacatatgaa 337  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  3870 gctgctttgctttgctcgtgatcagaaatatttcttctacaaaggttctgctcttcaagaggtaaacacatgaa 3943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 228 - 330
Target Start/End: Original strand, 87829 - 87930
Alignment:
Q  228 gagaagttctgttcgtgtggactgagtagaggcatcgctgctttgctttgctcgtgatcggaaatatttcttctacaaaggttctgctcttcaagaggta 327  Q
    |||||||| ||||||| |||||| ||||||||||||||| |||| ||||||| ||||||  ||| | || | ||||||||||||||||||||||||||||    
T  87829 gagaagttatgttcgt-tggactaagtagaggcatcgctactttactttgcttgtgatcataaacaattatactacaaaggttctgctcttcaagaggta 87927  T
Q  328 aac 330  Q
    |||    
T  87928 aac 87930  T

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Target: scaffold0705 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0705
Description:

Target: scaffold0705; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 282 - 337
Target Start/End: Complemental strand, 7675 - 7620
Alignment:
Q  282 tgatcggaaatatttcttctacaaaggttctgctcttcaagaggtaaacatatgaa 337  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  7675 tgatcagaaatattttttctacaaaggttctgctcttcaagaggtaaacacatgaa 7620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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