View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2356_high_11 (Length: 370)
Name: NF2356_high_11
Description: NF2356
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2356_high_11 |
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Alignment Details
Target: chr5 (Bit Score: 285; Significance: 1e-160; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 26 - 358
Target Start/End: Complemental strand, 28213081 - 28212751
Alignment:
| Q |
26 |
taaatcaaattataggaacaatatattgtaagactaataggtatagctttagtgaagatcctttaacatgtcttcacaagcagtgcaattgcgtatcaag |
125 |
Q |
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| T |
28213081 |
taaatcaaattgtaggaacaatatattgtaa-acta-tagatatagctttagtgaagatccttcaacatgtcctcacaagcagtgcaattgcgtatcaag |
28212984 |
T |
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| Q |
126 |
agtaatcatgtaagacattgtttttccttcattagtttattgtatagtttggggttaatattatgaatttatatcaaaattgaattacttgagactttaa |
225 |
Q |
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| T |
28212983 |
agtaatcatgtaagacattgtttttccttcattagtttattgtatagtttggggttaatattatgaatttatatcaaaattgaattacttgagactttaa |
28212884 |
T |
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| Q |
226 |
tcttaaaattttcaggtggttatggacaatggtatagtacaggtgtatttatccaatcctggtggatttataactagaatacaatataatggtattgata |
325 |
Q |
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| T |
28212883 |
tcttaaaattttcaggtggttatggacaatggtatagtgcaagtgtatttatccaatcctggtggatttgtaactagaatacaatataatggcattgata |
28212784 |
T |
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| Q |
326 |
atctgcttgaagctcttaacgaaaagaataata |
358 |
Q |
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||||||||||||||||||||||||||||||||| |
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| T |
28212783 |
atctgcttgaagctcttaacgaaaagaataata |
28212751 |
T |
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