View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2356_high_17 (Length: 322)
Name: NF2356_high_17
Description: NF2356
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2356_high_17 |
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Alignment Details
Target: chr4 (Bit Score: 266; Significance: 1e-148; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 12 - 305
Target Start/End: Complemental strand, 7288670 - 7288377
Alignment:
| Q |
12 |
atgaagtgaggtaatgtagattttagtgttgtcttagactgtcaccatgagttcattgtgcacgcctagcattaatcttgcagtcttcatcaccaccaca |
111 |
Q |
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| T |
7288670 |
atgaagtgaggtaatgtagattttagtgttgtcttagactgtcaccatgagttcattgtgcacgcctagcattaatcttgtagtcttcatcaccaccaca |
7288571 |
T |
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| Q |
112 |
tttttcttgagttgtttatgataaaataaaagttagcatgctacatcaaactgggttttgtttagtatattctattattttgtttcctattgttacataa |
211 |
Q |
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| T |
7288570 |
tttttcttgagttgtttatgataaaattaaagttagcatgctacatcaaactggattttgtttagtatattctattattttgtttcatattgttacataa |
7288471 |
T |
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| Q |
212 |
attaatcaaaataatgttccatatgtaaccagttcagaagccattccccaaaattatcactagtaaaatagataaatttactattagtaacaat |
305 |
Q |
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|||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
7288470 |
attaatcaaaataatgtttcatatgtaaccagttcagaagccgttccccaaaattatcaatagtaaaatagataaatttactattagtaacaat |
7288377 |
T |
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