View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2357_high_19 (Length: 298)
Name: NF2357_high_19
Description: NF2357
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2357_high_19 |
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Alignment Details
Target: chr5 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 12 - 295
Target Start/End: Original strand, 37162003 - 37162286
Alignment:
| Q |
12 |
atgaagctttgaaaagattagaccagtactgaattaaaataatattattgatggattaacaatttacttttattatttcaaagattaacatctaatcttt |
111 |
Q |
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| T |
37162003 |
atgaagctttgaaaagattagaccagtactgaattaaaataatattattgatggattaacaatttacttttattatttcaaagattaacatctaatcttt |
37162102 |
T |
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| Q |
112 |
ggtatttnnnnnnnnnnnngaatattaaaactattttctacccattaagtcttacttaaagtcaagtcttcctccagcatgtttcgtttcttattgtgag |
211 |
Q |
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| T |
37162103 |
ggtatttaaaaaacaaaaagaatattaaaactattttctacccattaagtcttacttaaagtcaagtcttcctccagcatgtttcgtttcttattgtgag |
37162202 |
T |
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| Q |
212 |
aagtaagaataagttgggtttcttactttggcagagcaaagatgaagatcatgactagtgatgaatgtattctcaagttagttg |
295 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
37162203 |
aagtaagaataagttgggtttcttactttggcagagcaaagatgaagatcatgactagtgatgtatgtattctcaagttagttg |
37162286 |
T |
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