View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2357_high_34 (Length: 238)
Name: NF2357_high_34
Description: NF2357
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2357_high_34 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 18 - 238
Target Start/End: Original strand, 44135944 - 44136164
Alignment:
| Q |
18 |
aaatctagtcaaagacagcgcctcatccaaagacaatgacccaaaaaactccgtaggaccaaccccaatccacccggaaaaacagcagccaaaaaacagc |
117 |
Q |
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| T |
44135944 |
aaatctagtcaaagacagcgcctcatccaaagacaatgacccaaaaaactccgtaggaccaaccccaatccaaccggaaaaacagcagccaaaaaacagc |
44136043 |
T |
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| Q |
118 |
aaaccatatagcaccatgcgccacacttactccaaaaaaggccaacgacgacagcagcaccctaaaccttcaaaaaagaccacctgtcaaccgtcctaac |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |
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| T |
44136044 |
aaaccatatagcaccatgcgccacacttactccaaaaaaggccaaagacgacagcagcaccctaaaccttcaaaaaagaccacctgtcaactgtccaaac |
44136143 |
T |
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| Q |
218 |
acacttagaaattatttaatt |
238 |
Q |
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||||||||||||||||||||| |
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| T |
44136144 |
acacttagaaattatttaatt |
44136164 |
T |
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