View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2357_high_44 (Length: 208)
Name: NF2357_high_44
Description: NF2357
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2357_high_44 |
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Alignment Details
Target: chr1 (Bit Score: 173; Significance: 3e-93; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 173; E-Value: 3e-93
Query Start/End: Original strand, 19 - 191
Target Start/End: Original strand, 52558273 - 52558445
Alignment:
| Q |
19 |
agtttgctgaagagttgctatcttacacagatacattttacaagacagttgtttcttattttaaaggagatgtaactgaggctggtaaaatggctctttc |
118 |
Q |
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| T |
52558273 |
agtttgctgaagagttgctatcttacacagatacattttacaagacagttgtttcttattttaaaggagatgtaactgaggctggtaaaatggctctttc |
52558372 |
T |
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| Q |
119 |
ttgatgctgttttattacatacagataaatacatataatgatataagagaaatgttaaacctggagaaagggg |
191 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
52558373 |
ttgatgctgttttattacatacagataaatacatataatgatataagagaaatgttaaacctggagaaagggg |
52558445 |
T |
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