View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2357_low_25 (Length: 279)
Name: NF2357_low_25
Description: NF2357
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2357_low_25 |
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Alignment Details
Target: chr4 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 127 - 191
Target Start/End: Complemental strand, 36680146 - 36680082
Alignment:
| Q |
127 |
acagacagagcaagcaaaggaagttctcaatgccgggtgttcagagctactacatactgacatca |
191 |
Q |
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| T |
36680146 |
acagacagagcaagcaaaggaagttctcaacgccgggtgttcagagctactacatactgacatca |
36680082 |
T |
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Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 36686740 - 36686695
Alignment:
| Q |
189 |
tcacatggaatgttgtttaaaaatggtcacgtgttattcttcattt |
234 |
Q |
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||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
36686740 |
tcacatggaatgttgtttataaatggtcacgtgttattcttcattt |
36686695 |
T |
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