View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2357_low_39 (Length: 236)
Name: NF2357_low_39
Description: NF2357
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2357_low_39 |
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Alignment Details
Target: chr7 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 27446342 - 27446551
Alignment:
| Q |
1 |
tggccattgtattattttgcacgctctaaagatctcacacacattcacaaacaaactttcttaatcaccttttttctgatttgtactatctatagcccac |
100 |
Q |
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| T |
27446342 |
tggccattgtattattttgcacgctctaaagatctcacacacattcacaaacaaactttcttaatcaccttttttctgatttgtactatctatagcccac |
27446441 |
T |
|
| Q |
101 |
tcaccaaaaaacaacaaaacatgaaaacaccaacacatcagtacaagacaacccttatattccatgcaatgaaacattgaacctatccatataacctcgg |
200 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27446442 |
tcaccataaaacaacaaaacatgaaaacaccaacacatcagtacaagacaacccttatattccatgcaatgaaacattgaacctatccatataacctcgg |
27446541 |
T |
|
| Q |
201 |
attaggattt |
210 |
Q |
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|||||||||| |
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| T |
27446542 |
attaggattt |
27446551 |
T |
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