View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2357_low_7 (Length: 414)
Name: NF2357_low_7
Description: NF2357
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2357_low_7 |
 | |
|
| [»] scaffold0182 (1 HSPs) |
| | |
|
| [»] scaffold0013 (1 HSPs) |
| | |
|
| [»] scaffold0009 (1 HSPs) |
| | |
|
| [»] scaffold0071 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 321; Significance: 0; HSPs: 20)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 321; E-Value: 0
Query Start/End: Original strand, 6 - 396
Target Start/End: Complemental strand, 37092376 - 37092001
Alignment:
| Q |
6 |
aggagcacagattgaatctgtcactaatgataacttgattgttagtgttttcaatagcttggatcaacctttccttatttcttggttagtttactctctc |
105 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37092376 |
aggaccacagattgaatctgtcactaatgataacttgattgttagtgttttcaatagcttggatcaacctttccttatttcttggttagtttactctctc |
37092277 |
T |
|
| Q |
106 |
ttctaactttcttgtttagnnnnnnnnnnnnnaaagtatcatcttgccgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcg |
205 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || |
|
|
| T |
37092276 |
ttctaactttcttgttta---------------aagtatcatcttgccgtccatttgggtcccacagtgctcgagggattagtctccgcagttgtgcacg |
37092192 |
T |
|
| Q |
206 |
gaggataccgggtttacaccaaaaaagactaatgttaacagtatgtgatgattcttaataggaatggagtgcagcagaggaggaattcatggcaagatgg |
305 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37092191 |
gaggatacccggtttacaccaaaaaagactaatgttaagagtatgtgatgattcttaataggaatggagtgcagcagaggaggaattcatggcaagatgg |
37092092 |
T |
|
| Q |
306 |
agtatatggaacaaactgtccaattccaccagggcagaactttacttatgttcttcaagtaaaagatcagattggtagctacttttacttt |
396 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37092091 |
agtatatggaacaaactgtccaattccaccagggcagaactttacttatgttcttcaagtaaaagatcagattggtagctacttttacttt |
37092001 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 158 - 221
Target Start/End: Original strand, 17981594 - 17981657
Alignment:
| Q |
158 |
atttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggttta |
221 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| |||||| |
|
|
| T |
17981594 |
atttgggtcccacaatgctcgagagattagtctccgcagttgcgcgcggaggatacccggttta |
17981657 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 150 - 231
Target Start/End: Original strand, 5394485 - 5394566
Alignment:
| Q |
150 |
tgccgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggtttacaccaaaaaa |
231 |
Q |
| |
|
||||| ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| | |||||||| ||||| |
|
|
| T |
5394485 |
tgccgcccatttgggtcccacaatgctcgtgggattagtctccgcagttgcacgcggaggatactcgatttacacccaaaaa |
5394566 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 150 - 231
Target Start/End: Complemental strand, 37180053 - 37179972
Alignment:
| Q |
150 |
tgccgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggtttacaccaaaaaa |
231 |
Q |
| |
|
||||| ||||||| |||||||||| |||||||||||||||| |||| ||| |||||||||||||| | |||||||||||||| |
|
|
| T |
37180053 |
tgccgcccatttgagtcccacaatactcgagggattagtctacgcacttgcgcgcggaggatacccgatttacaccaaaaaa |
37179972 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 150 - 214
Target Start/End: Original strand, 25423833 - 25423897
Alignment:
| Q |
150 |
tgccgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggatacc |
214 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||| |
|
|
| T |
25423833 |
tgccgcccatttgggtcccacaatgctcgagggattagtctcagcagttgcgcgtggaggatacc |
25423897 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 31579281 - 31579208
Alignment:
| Q |
150 |
tgccgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggtttaca |
223 |
Q |
| |
|
||||| |||||| |||||||||||||||||| |||||| |||||||||| |||||||||||||| |||||||| |
|
|
| T |
31579281 |
tgccgcccatttaagtcccacaatgctcgaggaattagtttccgcagttgcgcgcggaggatacccggtttaca |
31579208 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 158 - 223
Target Start/End: Complemental strand, 42745160 - 42745095
Alignment:
| Q |
158 |
atttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggtttaca |
223 |
Q |
| |
|
|||||||| |||||||| |||||||||||||||| ||||||| |||||||||||||| |||||||| |
|
|
| T |
42745160 |
atttgggttccacaatggtcgagggattagtctcagcagttgcgcgcggaggatacccggtttaca |
42745095 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 14551571 - 14551644
Alignment:
| Q |
158 |
atttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggtttacaccaaaaaa |
231 |
Q |
| |
|
|||||||||| |||||||||||||||||| |||||||||||| |||| |||||||| | |||| ||||||||| |
|
|
| T |
14551571 |
atttgggtcctacaatgctcgagggattaatctccgcagttgcgcgcagaggatactcgatttataccaaaaaa |
14551644 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 148 - 210
Target Start/End: Complemental strand, 7020414 - 7020352
Alignment:
| Q |
148 |
cttgccgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggagga |
210 |
Q |
| |
|
||||||| |||||||||||| |||||||||||| |||||||||| |||||| |||||||||| |
|
|
| T |
7020414 |
cttgccgcccatttgggtcctacaatgctcgagtgattagtctcgacagttgcgcgcggagga |
7020352 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 150 - 212
Target Start/End: Complemental strand, 9438188 - 9438126
Alignment:
| Q |
150 |
tgccgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggata |
212 |
Q |
| |
|
||||| ||||||| ||||||||||||| ||||||||||| ||| |||||| |||||||||||| |
|
|
| T |
9438188 |
tgccgcccatttgtgtcccacaatgcttgagggattagtttccacagttgcgcgcggaggata |
9438126 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 156 - 231
Target Start/End: Original strand, 17655756 - 17655833
Alignment:
| Q |
156 |
ccatttgggtcccacaatgctcgagggattagtctccgcagtt--gtgcgcggaggataccgggtttacaccaaaaaa |
231 |
Q |
| |
|
|||||||| | |||||| ||||||||||||||||||||||||| ||||| |||||||||| | ||||| |||||||| |
|
|
| T |
17655756 |
ccatttggattccacaaggctcgagggattagtctccgcagttgcgtgcgaggaggatacctgatttacgccaaaaaa |
17655833 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 150 - 221
Target Start/End: Complemental strand, 18105414 - 18105344
Alignment:
| Q |
150 |
tgccgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggttta |
221 |
Q |
| |
|
||||| ||||||| ||| |||||| |||||||||||||||| |||||||| |||||||||||| | |||||| |
|
|
| T |
18105414 |
tgccgcccatttgagtctcacaatactcgagggattagtct-cgcagttgcgcgcggaggatatccggttta |
18105344 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 148 - 214
Target Start/End: Complemental strand, 13835511 - 13835445
Alignment:
| Q |
148 |
cttgccgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggatacc |
214 |
Q |
| |
|
|||||||| |||||| ||||||||||| | ||||||||||| || ||||||||| | |||||||||| |
|
|
| T |
13835511 |
cttgccgttcatttgagtcccacaatgtttgagggattagtttctgcagttgtgtgtggaggatacc |
13835445 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 148 - 190
Target Start/End: Complemental strand, 14121936 - 14121894
Alignment:
| Q |
148 |
cttgccgtccatttgggtcccacaatgctcgagggattagtct |
190 |
Q |
| |
|
||||||| ||||||| ||||||||||||||||||||||||||| |
|
|
| T |
14121936 |
cttgccgcccatttgagtcccacaatgctcgagggattagtct |
14121894 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 159 - 214
Target Start/End: Original strand, 1682120 - 1682175
Alignment:
| Q |
159 |
tttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggatacc |
214 |
Q |
| |
|
||||||||| | ||| ||||||||||||||||||||||||| || | ||||||||| |
|
|
| T |
1682120 |
tttgggtcctataatactcgagggattagtctccgcagttgcgcacagaggatacc |
1682175 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 149 - 211
Target Start/End: Complemental strand, 3562243 - 3562181
Alignment:
| Q |
149 |
ttgccgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggat |
211 |
Q |
| |
|
|||||| ||||||||||||||||| ||| |||| | |||||| |||||||| |||||| |||| |
|
|
| T |
3562243 |
ttgccgcccatttgggtcccacaaagcttgaggtactagtcttcgcagttgcgcgcggcggat |
3562181 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 164 - 214
Target Start/End: Original strand, 14412824 - 14412874
Alignment:
| Q |
164 |
gtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggatacc |
214 |
Q |
| |
|
|||||| ||||||| ||| ||||||||| ||||||||||||| |||||||| |
|
|
| T |
14412824 |
gtcccataatgctcaaggaattagtctctgcagttgtgcgcgaaggatacc |
14412874 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 153 - 199
Target Start/End: Complemental strand, 39401118 - 39401072
Alignment:
| Q |
153 |
cgtccatttgggtcccacaatgctcgagggattagtctccgcagttg |
199 |
Q |
| |
|
||||||||| |||||||||||||||| | |||||| ||||||||||| |
|
|
| T |
39401118 |
cgtccatttaggtcccacaatgctcgtgagattagactccgcagttg |
39401072 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 214
Target Start/End: Complemental strand, 38373035 - 38372982
Alignment:
| Q |
161 |
tgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggatacc |
214 |
Q |
| |
|
||||||||||||||||| ||| |||||||| |||||| |||||||||||||| |
|
|
| T |
38373035 |
tgggtcccacaatgctcaaggaattagtctatacagttgcgcgcggaggatacc |
38372982 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 156 - 212
Target Start/End: Original strand, 39562260 - 39562316
Alignment:
| Q |
156 |
ccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggata |
212 |
Q |
| |
|
||||||| ||||||||| |||| |||||| ||||||||||||||| ||||||||| |
|
|
| T |
39562260 |
ccatttgaatcccacaatattcgaaggattaatctccgcagttgtgctcggaggata |
39562316 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 71; Significance: 5e-32; HSPs: 15)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 153 - 231
Target Start/End: Original strand, 2744025 - 2744103
Alignment:
| Q |
153 |
cgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggtttacaccaaaaaa |
231 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| |
|
|
| T |
2744025 |
cgtccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttacaccaaaaaa |
2744103 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 150 - 231
Target Start/End: Complemental strand, 4125076 - 4124995
Alignment:
| Q |
150 |
tgccgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggtttacaccaaaaaa |
231 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | |||||||||||||| |
|
|
| T |
4125076 |
tgccgcccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccgatttacaccaaaaaa |
4124995 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 150 - 231
Target Start/End: Complemental strand, 7839305 - 7839224
Alignment:
| Q |
150 |
tgccgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggtttacaccaaaaaa |
231 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || ||| || |||||| |
|
|
| T |
7839305 |
tgccgcccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccgggttatacaaaaaaa |
7839224 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 148 - 231
Target Start/End: Complemental strand, 19715780 - 19715696
Alignment:
| Q |
148 |
cttgccgtccatttgggtcccacaatgctcgaggg-attagtctccgcagttgtgcgcggaggataccgggtttacaccaaaaaa |
231 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||| ||||||||| |||||| |
|
|
| T |
19715780 |
cttgccgcccatttgggtcccacaatgctcgaggggattagtctccgcagttgcgcgcggagaatacctggtttacacaaaaaaa |
19715696 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 150 - 231
Target Start/End: Complemental strand, 13468797 - 13468716
Alignment:
| Q |
150 |
tgccgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggtttacaccaaaaaa |
231 |
Q |
| |
|
||||| ||||||| |||||||||||||||| ||||||||||||||||||| || ||||||||||| |||||||||| ||||| |
|
|
| T |
13468797 |
tgccgcccatttgagtcccacaatgctcgaaggattagtctccgcagttgcgcacggaggatacccggtttacacccaaaaa |
13468716 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 150 - 231
Target Start/End: Original strand, 30936093 - 30936174
Alignment:
| Q |
150 |
tgccgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggtttacaccaaaaaa |
231 |
Q |
| |
|
||||| |||||||||||| |||||| |||||||||||||||||||||||| ||||||| | |||| |||||| ||||||||| |
|
|
| T |
30936093 |
tgccgcccatttgggtccgacaatgttcgagggattagtctccgcagttgcgcgcggatgttacccggtttataccaaaaaa |
30936174 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 164 - 225
Target Start/End: Original strand, 39086855 - 39086916
Alignment:
| Q |
164 |
gtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggtttacacc |
225 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| |
|
|
| T |
39086855 |
gtcccacaatgctcgagggattagtctccgcagttgcacgcggaggatacctggtttacacc |
39086916 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 12958131 - 12958077
Alignment:
| Q |
156 |
ccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggagga |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| | |||||||||| |
|
|
| T |
12958131 |
ccatttgggtcccacaatgctcgagggattagtctccgcagtagcgcgcggagga |
12958077 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 156 - 231
Target Start/End: Original strand, 8521793 - 8521867
Alignment:
| Q |
156 |
ccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggtttacaccaaaaaa |
231 |
Q |
| |
|
||||||| ||||||||||||||||||||||||| ||| |||||| ||||||| |||||| | |||||||||||||| |
|
|
| T |
8521793 |
ccatttgagtcccacaatgctcgagggattagtatcc-cagttgcgcgcggaagatacccgatttacaccaaaaaa |
8521867 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 191
Target Start/End: Complemental strand, 30056053 - 30056012
Alignment:
| Q |
150 |
tgccgtccatttgggtcccacaatgctcgagggattagtctc |
191 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
30056053 |
tgccgtccatttgggttccacaatgctcgagggattagtctc |
30056012 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 214
Target Start/End: Original strand, 40320184 - 40320249
Alignment:
| Q |
149 |
ttgccgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggatacc |
214 |
Q |
| |
|
|||||||| |||||| |||||| ||||||||| |||||||||| | |||||| ||||||||||||| |
|
|
| T |
40320184 |
ttgccgtctatttggatcccacgatgctcgagagattagtctctgtagttgtacgcggaggatacc |
40320249 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 152 - 223
Target Start/End: Complemental strand, 13005728 - 13005657
Alignment:
| Q |
152 |
ccgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggtttaca |
223 |
Q |
| |
|
|||||||||| |||||||||| |||| || ||| ||||||||||||| |||||||| |||||| ||||||| |
|
|
| T |
13005728 |
ccgtccatttaggtcccacaaggctcaagagatcagtctccgcagttctgcgcggaagatacctagtttaca |
13005657 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 156 - 199
Target Start/End: Complemental strand, 36994546 - 36994503
Alignment:
| Q |
156 |
ccatttgggtcccacaatgctcgagggattagtctccgcagttg |
199 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||| ||||||| |
|
|
| T |
36994546 |
ccatttgggtcccacaaggctcgagggattagtctctgcagttg |
36994503 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 148 - 195
Target Start/End: Original strand, 24988586 - 24988633
Alignment:
| Q |
148 |
cttgccgtccatttgggtcccacaatgctcgagggattagtctccgca |
195 |
Q |
| |
|
||||||| |||||| |||||||||| ||||||||||||||||||||| |
|
|
| T |
24988586 |
cttgccgctcatttgagtcccacaatactcgagggattagtctccgca |
24988633 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 191
Target Start/End: Original strand, 15683018 - 15683059
Alignment:
| Q |
150 |
tgccgtccatttgggtcccacaatgctcgagggattagtctc |
191 |
Q |
| |
|
||||| |||||| |||||||||||||||||||||||| |||| |
|
|
| T |
15683018 |
tgccgcccatttaggtcccacaatgctcgagggattaatctc |
15683059 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 70; Significance: 2e-31; HSPs: 25)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 263 - 396
Target Start/End: Original strand, 17346262 - 17346395
Alignment:
| Q |
263 |
ataggaatggagtgcagcagaggaggaattcatggcaagatggagtatatggaacaaactgtccaattccaccagggcagaactttacttatgttcttca |
362 |
Q |
| |
|
||||||||||||||| |||||||| || |||||||| |||||||| ||||| ||||| |||||||| | ||||| |||||||| |||||| ||||||| |
|
|
| T |
17346262 |
ataggaatggagtgctacagaggagaaactcatggcaggatggagtgtatggtacaaattgtccaatctctccaggacagaacttcacttatattcttca |
17346361 |
T |
|
| Q |
363 |
agtaaaagatcagattggtagctacttttacttt |
396 |
Q |
| |
|
|||||||||||||||||||||||| || |||||| |
|
|
| T |
17346362 |
agtaaaagatcagattggtagctatttctacttt |
17346395 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 150 - 231
Target Start/End: Complemental strand, 31307118 - 31307037
Alignment:
| Q |
150 |
tgccgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggtttacaccaaaaaa |
231 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| |
|
|
| T |
31307118 |
tgccgcccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttacaccaaaaaa |
31307037 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 263 - 396
Target Start/End: Complemental strand, 17137529 - 17137399
Alignment:
| Q |
263 |
ataggaatggagtgcagcagaggaggaattcatggcaagatggagtatatggaacaaactgtccaattccaccagggcagaactttacttatgttcttca |
362 |
Q |
| |
|
||||||||||||||| ||||||||| || ||||||||||||||||| ||||| ||||| |||||||| | ||||| ||||| |||||| ||||||| |
|
|
| T |
17137529 |
ataggaatggagtgctgcagaggagaaactcatggcaagatggagtgtatggtacaaattgtccaatctctccaggaaagaac---acttatattcttca |
17137433 |
T |
|
| Q |
363 |
agtaaaagatcagattggtagctacttttacttt |
396 |
Q |
| |
|
|||||||||||||||||| ||||| || |||||| |
|
|
| T |
17137432 |
agtaaaagatcagattggcagctatttctacttt |
17137399 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 148 - 231
Target Start/End: Original strand, 9012357 - 9012440
Alignment:
| Q |
148 |
cttgccgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggtttacaccaaaaaa |
231 |
Q |
| |
|
||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| | |||| ||| ||||| |
|
|
| T |
9012357 |
cttgccgcccacttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccgatttatacccaaaaa |
9012440 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 149 - 231
Target Start/End: Original strand, 35972431 - 35972513
Alignment:
| Q |
149 |
ttgccgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggtttacaccaaaaaa |
231 |
Q |
| |
|
|||||| ||||||||||||||| ||| |||||||||||||||||||||||| | |||||||||||| ||||||||||||||| |
|
|
| T |
35972431 |
ttgccgcccatttgggtcccactatgttcgagggattagtctccgcagttgcgtgcggaggatacctagtttacaccaaaaaa |
35972513 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 51626358 - 51626285
Alignment:
| Q |
150 |
tgccgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggtttaca |
223 |
Q |
| |
|
|||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||||| | |||||| |
|
|
| T |
51626358 |
tgccgtccatttgggtcccacagtgctcgagagattagtctccgcagttgcgcgcggaggatacccgatttaca |
51626285 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 150 - 214
Target Start/End: Original strand, 38766178 - 38766242
Alignment:
| Q |
150 |
tgccgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggatacc |
214 |
Q |
| |
|
||||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
38766178 |
tgccgcccatttgggtctcacaatgctcgagggattagtctccgcagttgcgcgcggaggatacc |
38766242 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 150 - 231
Target Start/End: Original strand, 46016238 - 46016319
Alignment:
| Q |
150 |
tgccgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggtttacaccaaaaaa |
231 |
Q |
| |
|
||||| |||||||||||||||||||||||| | ||||||||||| ||||| ||| |||||||||| | |||||||||||||| |
|
|
| T |
46016238 |
tgccgcccatttgggtcccacaatgctcgaagaattagtctccgtagttgcgcgtggaggatacccgatttacaccaaaaaa |
46016319 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 148 - 231
Target Start/End: Original strand, 33529344 - 33529427
Alignment:
| Q |
148 |
cttgccgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggtttacaccaaaaaa |
231 |
Q |
| |
|
||||||| |||||||||||||||||| || |||||||||||||||||||||| || |||||||||| | |||||||| ||||| |
|
|
| T |
33529344 |
cttgccgcccatttgggtcccacaatactggagggattagtctccgcagttgcgcacggaggatacttgatttacacccaaaaa |
33529427 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 148 - 214
Target Start/End: Original strand, 14854692 - 14854758
Alignment:
| Q |
148 |
cttgccgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggatacc |
214 |
Q |
| |
|
||||||| |||||||||||| ||||| ||||||||||||||||| ||||||| |||||||||||||| |
|
|
| T |
14854692 |
cttgccgcccatttgggtccaacaattctcgagggattagtctctgcagttgcgcgcggaggatacc |
14854758 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 150 - 231
Target Start/End: Complemental strand, 46250607 - 46250526
Alignment:
| Q |
150 |
tgccgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggtttacaccaaaaaa |
231 |
Q |
| |
|
||||| ||||||||||||||| |||||||| | |||||||||||| |||||||| |||||||| | || ||||||||||||| |
|
|
| T |
46250607 |
tgccgcccatttgggtcccacgatgctcgaagaattagtctccgcggttgtgcgtggaggataaccggattacaccaaaaaa |
46250526 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 11 - 95
Target Start/End: Original strand, 17345557 - 17345641
Alignment:
| Q |
11 |
cacagattgaatctgtcactaatgataacttgattgttagtgttttcaatagcttggatcaacctttccttatttcttggttagt |
95 |
Q |
| |
|
|||||||||| || || ||||||||||| |||||| | | |||||| |||||||||||| |||||||||| |||||||||||||| |
|
|
| T |
17345557 |
cacagattgagtcagtgactaatgataatttgattatcaatgtttttaatagcttggatgaacctttcctcatttcttggttagt |
17345641 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 148 - 214
Target Start/End: Original strand, 15133462 - 15133528
Alignment:
| Q |
148 |
cttgccgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggatacc |
214 |
Q |
| |
|
|||| ||||| |||||||||||||||| | ||| |||||||||||||||||| |||||||||||||| |
|
|
| T |
15133462 |
cttgtcgtccgtttgggtcccacaatgtttgagagattagtctccgcagttgcgcgcggaggatacc |
15133528 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 17138960 - 17138878
Alignment:
| Q |
11 |
cacagattgaatctgtcactaatgataacttgattgttagtgttttcaatagcttggatcaacctttccttatttcttggtta |
93 |
Q |
| |
|
|||||||||| || || ||||||||||| |||||| | | ||||||||| ||||||||| |||||||||| |||||||||||| |
|
|
| T |
17138960 |
cacagattgagtcagtgactaatgataatttgattatcaatgttttcaacagcttggatgaacctttcctcatttcttggtta |
17138878 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 151 - 221
Target Start/End: Complemental strand, 35334149 - 35334079
Alignment:
| Q |
151 |
gccgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggttta |
221 |
Q |
| |
|
|||| |||||||||||||||||| ||||||||||||||||||||||||| ||| | |||||| | |||||| |
|
|
| T |
35334149 |
gccgcccatttgggtcccacaatactcgagggattagtctccgcagttgcgcgtgaaggatatccggttta |
35334079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 156 - 231
Target Start/End: Original strand, 45994617 - 45994692
Alignment:
| Q |
156 |
ccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggtttacaccaaaaaa |
231 |
Q |
| |
|
||||||||||| ||||||||||||| |||||||||||||||||| ||| |||||||| ||||| ||||||||| |
|
|
| T |
45994617 |
ccatttgggtctcacaatgctcgagagattagtctccgcagttgcacgccaaggatacccagtttataccaaaaaa |
45994692 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 152 - 207
Target Start/End: Complemental strand, 13948642 - 13948587
Alignment:
| Q |
152 |
ccgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcgga |
207 |
Q |
| |
|
||||||||||| || |||||||||||||||||||||||| ||||||| ||||||| |
|
|
| T |
13948642 |
ccgtccatttgaatctcacaatgctcgagggattagtctctgcagttgcgcgcgga |
13948587 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 199
Target Start/End: Original strand, 13686690 - 13686740
Alignment:
| Q |
149 |
ttgccgtccatttgggtcccacaatgctcgagggattagtctccgcagttg |
199 |
Q |
| |
|
|||||||||||||||||| ||||| ||||||| ||||||||||| |||||| |
|
|
| T |
13686690 |
ttgccgtccatttgggtctcacaaggctcgagagattagtctccacagttg |
13686740 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 171 - 221
Target Start/End: Complemental strand, 32005177 - 32005127
Alignment:
| Q |
171 |
aatgctcgagggattagtctccgcagttgtgcgcggaggataccgggttta |
221 |
Q |
| |
|
|||||||||| |||||||||||||| || ||||||||||||||| |||||| |
|
|
| T |
32005177 |
aatgctcgagagattagtctccgcaattatgcgcggaggatacccggttta |
32005127 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 224
Target Start/End: Original strand, 18841573 - 18841649
Alignment:
| Q |
149 |
ttgccgtccatttgggtcccacaatgctcgagggattagtctccgc-agttgtgcgcggaggataccgggtttacac |
224 |
Q |
| |
|
|||||| | |||||| ||| |||| |||| |||||||||||||||| ||||| || ||||||||||| ||||||||| |
|
|
| T |
18841573 |
ttgccgccaatttggatcctacaaggctcaagggattagtctccgcaagttgcgcacggaggatacctggtttacac |
18841649 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 231
Target Start/End: Original strand, 31308386 - 31308467
Alignment:
| Q |
150 |
tgccgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggtttacaccaaaaaa |
231 |
Q |
| |
|
||||||| |||| |||||||||||| | |||||||||||| | |||||||| |||||| ||||| |||||| ||||||| |
|
|
| T |
31308386 |
tgccgtctatttaggtcccacaatgtttgagggattagtcctctcagttgtgtgcggagaatacccaatttacatcaaaaaa |
31308467 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 198
Target Start/End: Complemental strand, 36990147 - 36990098
Alignment:
| Q |
149 |
ttgccgtccatttgggtcccacaatgctcgagggattagtctccgcagtt |
198 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| |||||| | ||||||| |
|
|
| T |
36990147 |
ttgccgtccatttgaatcccacaatgctcgaggaattagtattcgcagtt |
36990098 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 149 - 205
Target Start/End: Complemental strand, 25768741 - 25768685
Alignment:
| Q |
149 |
ttgccgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcg |
205 |
Q |
| |
|
|||||| |||||||||| |||||||||| || |||||||||||| || ||| ||||| |
|
|
| T |
25768741 |
ttgccgcccatttgggtgccacaatgcttgaaggattagtctccacaattgcgcgcg |
25768685 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 51853784 - 51853828
Alignment:
| Q |
149 |
ttgccgtccatttgggtcccacaatgctcgagggattagtctccg |
193 |
Q |
| |
|
|||| |||||||| |||| |||||| ||||||||||||||||||| |
|
|
| T |
51853784 |
ttgcggtccattttggtctcacaatactcgagggattagtctccg |
51853828 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 277 - 353
Target Start/End: Original strand, 55295338 - 55295414
Alignment:
| Q |
277 |
cagcagaggaggaattcatggcaagatggagtatatggaacaaactgtccaattccaccagggcagaactttactta |
353 |
Q |
| |
|
||||| |||||||| |||||||| |||||||| | ||| ||||||||||| || || || ||| ||||||| ||||| |
|
|
| T |
55295338 |
cagcacaggaggaactcatggcaggatggagtttctggcacaaactgtccgatcccgcctgggaagaacttcactta |
55295414 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 66; Significance: 5e-29; HSPs: 25)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 150 - 231
Target Start/End: Original strand, 29059894 - 29059975
Alignment:
| Q |
150 |
tgccgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggtttacaccaaaaaa |
231 |
Q |
| |
|
||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| |||||||||||||||| |
|
|
| T |
29059894 |
tgccgcccatttgggtcccacaatgcttgagggattagtctccgcagttgcgcgcggaggatacccggtttacaccaaaaaa |
29059975 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 150 - 231
Target Start/End: Original strand, 31492192 - 31492273
Alignment:
| Q |
150 |
tgccgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggtttacaccaaaaaa |
231 |
Q |
| |
|
||||| |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| |
|
|
| T |
31492192 |
tgccgcccatttaggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttacaccaaaaaa |
31492273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 156 - 221
Target Start/End: Complemental strand, 21747086 - 21747021
Alignment:
| Q |
156 |
ccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggttta |
221 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||| |
|
|
| T |
21747086 |
ccatttgggtcccacaatcctcgagggattagtcttcgcagttgtgcgcggaggatacctggttta |
21747021 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 158 - 238
Target Start/End: Complemental strand, 37339777 - 37339697
Alignment:
| Q |
158 |
atttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggtttacaccaaaaaagactaat |
238 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||| || ||||||||||| | |||| ||||||||| |||||| |
|
|
| T |
37339777 |
atttgggtcccataatgctcgagggattagtctccgcagttgcgcacggaggatacccgatttataccaaaaaatactaat |
37339697 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 28665187 - 28665260
Alignment:
| Q |
158 |
atttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggtttacaccaaaaaa |
231 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||| |
|
|
| T |
28665187 |
attttggtcccacaatgctcgagggattagtctccgcagttgcacgcggaggatacccagtttacacaaaaaaa |
28665260 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 148 - 231
Target Start/End: Complemental strand, 19477303 - 19477223
Alignment:
| Q |
148 |
cttgccgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggtttacaccaaaaaa |
231 |
Q |
| |
|
||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| | |||||||||| ||||| |
|
|
| T |
19477303 |
cttgccggccatttgggtcccacaatgct-gagggattagtctccgcagt--tgcgcggaggatagctggtttacacccaaaaa |
19477223 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 148 - 231
Target Start/End: Complemental strand, 11486798 - 11486715
Alignment:
| Q |
148 |
cttgccgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggtttacaccaaaaaa |
231 |
Q |
| |
|
||||||| |||||||||| ||||||||||| || |||||||||| |||||| |||||||||||||| ||||||||| |||||| |
|
|
| T |
11486798 |
cttgccgcccatttgggttccacaatgctcaagagattagtctctacagttgcgcgcggaggatacccggtttacacaaaaaaa |
11486715 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 156 - 230
Target Start/End: Original strand, 31776513 - 31776587
Alignment:
| Q |
156 |
ccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggtttacaccaaaaa |
230 |
Q |
| |
|
|||||||||||||||||| |||||||||||| ||| |||||||| | |||||||||||| |||||| |||||||| |
|
|
| T |
31776513 |
ccatttgggtcccacaatactcgagggattaatcttcgcagttgcgggcggaggatacctggtttataccaaaaa |
31776587 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 153 - 230
Target Start/End: Original strand, 45778956 - 45779033
Alignment:
| Q |
153 |
cgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggtttacaccaaaaa |
230 |
Q |
| |
|
||||| |||| ||| |||||| ||||||||||||||||||||||||| | |||||||||| ||||||||||||||| |
|
|
| T |
45778956 |
cgtccgtttgagtctcacaatactcgagggattagtctccgcagttgcgaatggaggatacctggtttacaccaaaaa |
45779033 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 148 - 224
Target Start/End: Original strand, 20207584 - 20207660
Alignment:
| Q |
148 |
cttgccgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggtttacac |
224 |
Q |
| |
|
||||||| ||||||| ||| ||||||||||||||||||||||||||||||| || | |||||||| ||||||||| |
|
|
| T |
20207584 |
cttgccgcgcatttggatcctacaatgctcgagggattagtctccgcagttgcgcacagaggatactcggtttacac |
20207660 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 148 - 231
Target Start/End: Original strand, 33299166 - 33299249
Alignment:
| Q |
148 |
cttgccgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggtttacaccaaaaaa |
231 |
Q |
| |
|
|||||| ||||||||| | |||||||||| | |||||||||||||||||| |||| |||| ||||| ||||||||| |||||| |
|
|
| T |
33299166 |
cttgccatccatttggattccacaatgcttaatggattagtctccgcagttatgcgtggagaatacccggtttacacaaaaaaa |
33299249 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 221
Target Start/End: Original strand, 35707941 - 35708006
Alignment:
| Q |
156 |
ccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggttta |
221 |
Q |
| |
|
|||||| | ||| ||||||||||||||||||||||| ||||||| ||| |||||||||| |||||| |
|
|
| T |
35707941 |
ccatttagatcctacaatgctcgagggattagtctctgcagttgcgcgtggaggatacccggttta |
35708006 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 150 - 231
Target Start/End: Original strand, 28537479 - 28537556
Alignment:
| Q |
150 |
tgccgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggtttacaccaaaaaa |
231 |
Q |
| |
|
||||| |||||||||||| ||||| |||||||||||||||||||||| |||| |||||||| |||||| ||||||||| |
|
|
| T |
28537479 |
tgccgcccatttgggtcc----atgcttgagggattagtctccgcagttgcacgcgaaggatacccggtttataccaaaaaa |
28537556 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 150 - 188
Target Start/End: Original strand, 14545032 - 14545070
Alignment:
| Q |
150 |
tgccgtccatttgggtcccacaatgctcgagggattagt |
188 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
14545032 |
tgccgtccatttgggtcccacaatgctcgatggattagt |
14545070 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 148 - 214
Target Start/End: Original strand, 24172296 - 24172362
Alignment:
| Q |
148 |
cttgccgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggatacc |
214 |
Q |
| |
|
||||||| ||| |||| ||||||||||||||| |||||||||| ||||||| |||||||| ||||| |
|
|
| T |
24172296 |
cttgccgcccacttggatcccacaatgctcgaaggattagtctatgcagttgcgcgcggagtatacc |
24172362 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 199
Target Start/End: Complemental strand, 29428845 - 29428795
Alignment:
| Q |
149 |
ttgccgtccatttgggtcccacaatgctcgagggattagtctccgcagttg |
199 |
Q |
| |
|
|||||| |||||||| |||||||||| |||||||||||||||| ||||||| |
|
|
| T |
29428845 |
ttgccgaccatttggatcccacaatgttcgagggattagtctctgcagttg |
29428795 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 148 - 231
Target Start/End: Original strand, 32470003 - 32470088
Alignment:
| Q |
148 |
cttgccgtccatttgggtcccacaat--gctcgagggattagtctccgcagttgtgcgcggaggataccgggtttacaccaaaaaa |
231 |
Q |
| |
|
||||||||||||||||||| |||||| ||||||| ||||||| | |||||||| ||||||||||| | |||||| ||| ||||| |
|
|
| T |
32470003 |
cttgccgtccatttgggtctcacaatatgctcgagagattagtgttcgcagttgcacgcggaggatatctggtttatacccaaaaa |
32470088 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 156 - 233
Target Start/End: Complemental strand, 25421286 - 25421210
Alignment:
| Q |
156 |
ccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggtttacaccaaaaaaga |
233 |
Q |
| |
|
||||||||||||||||| |||| |||||||||| | |||||||| | |||||||||| ||||||||||||||||| |
|
|
| T |
25421286 |
ccatttgggtcccacaaagctcaagggattagtgtttgcagttgt-agtggaggatacccagtttacaccaaaaaaga |
25421210 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 169 - 222
Target Start/End: Complemental strand, 36821113 - 36821060
Alignment:
| Q |
169 |
acaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggtttac |
222 |
Q |
| |
|
||||||||||||||||||||||| ||||||| |||| |||||||| ||||||| |
|
|
| T |
36821113 |
acaatgctcgagggattagtctctgcagttgcgcgcagaggatacttggtttac |
36821060 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 3231313 - 3231381
Alignment:
| Q |
155 |
tccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggtttaca |
223 |
Q |
| |
|
||||||| |||||||||||| ||||| |||||| ||| ||||||| ||||||||||||| | |||||| |
|
|
| T |
3231313 |
tccatttaggtcccacaatgttcgagagattagactcaccagttgtacgcggaggatacccgatttaca |
3231381 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 153 - 211
Target Start/End: Complemental strand, 28828814 - 28828756
Alignment:
| Q |
153 |
cgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggat |
211 |
Q |
| |
|
|||||||||||||| ||||| |||| | |||||||||| |||||||| |||||||||| |
|
|
| T |
28828814 |
cgtccatttgggtctcacaaggctcaatggattagtctgcgcagttgctcgcggaggat |
28828756 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 156 - 214
Target Start/End: Complemental strand, 42741854 - 42741797
Alignment:
| Q |
156 |
ccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggatacc |
214 |
Q |
| |
|
|||||||||||| | ||| |||||||||||| |||| ||||||| |||||||||||||| |
|
|
| T |
42741854 |
ccatttgggtcc-ataatactcgagggattaatctctgcagttgcgcgcggaggatacc |
42741797 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 231
Target Start/End: Original strand, 1424669 - 1424745
Alignment:
| Q |
157 |
catttgggtcccacaatgctcgagggattagtctccgcagttgtgcg--cggaggataccgggtttacaccaaaaaa |
231 |
Q |
| |
|
|||||||||||||||| || ||| |||||||||||||||||| ||| || |||| ||| | |||||||||||||| |
|
|
| T |
1424669 |
catttgggtcccacaagacttgagagattagtctccgcagttgcgcgcacgaaggacacccgatttacaccaaaaaa |
1424745 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 231
Target Start/End: Complemental strand, 49118277 - 49118220
Alignment:
| Q |
174 |
gctcgagggattagtctccgcagttgtgcgcggaggataccgggtttacaccaaaaaa |
231 |
Q |
| |
|
|||||||||||||||||| |||||| ||||| | || |||| ||||||||| |||||| |
|
|
| T |
49118277 |
gctcgagggattagtctctgcagttttgcgcagtggttacccggtttacacaaaaaaa |
49118220 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 150 - 186
Target Start/End: Complemental strand, 13254153 - 13254117
Alignment:
| Q |
150 |
tgccgtccatttgggtcccacaatgctcgagggatta |
186 |
Q |
| |
|
||||| |||||| |||||||||||||||||||||||| |
|
|
| T |
13254153 |
tgccgcccatttaggtcccacaatgctcgagggatta |
13254117 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 66; Significance: 5e-29; HSPs: 10)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 150 - 231
Target Start/End: Complemental strand, 5123550 - 5123469
Alignment:
| Q |
150 |
tgccgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggtttacaccaaaaaa |
231 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |
|
|
| T |
5123550 |
tgccgcccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggataccctgtttacaccaaaaaa |
5123469 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 150 - 231
Target Start/End: Original strand, 10592016 - 10592097
Alignment:
| Q |
150 |
tgccgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggtttacaccaaaaaa |
231 |
Q |
| |
|
||||| ||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||| | |||||||||||||| |
|
|
| T |
10592016 |
tgccgcccatttgagtcccacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccgatttacaccaaaaaa |
10592097 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 22188042 - 22187969
Alignment:
| Q |
158 |
atttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggtttacaccaaaaaa |
231 |
Q |
| |
|
|||||||||||||||| || |||||||||||||||||||||| |||||||||||||| || ||||||||||||| |
|
|
| T |
22188042 |
atttgggtcccacaatactagagggattagtctccgcagttgcgcgcggaggatacccggcttacaccaaaaaa |
22187969 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 156 - 231
Target Start/End: Original strand, 31113429 - 31113504
Alignment:
| Q |
156 |
ccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggtttacaccaaaaaa |
231 |
Q |
| |
|
|||||||| ||||||||| ||||||||||||||||||||||||| ||||| |||||||| | ||||||| |||||| |
|
|
| T |
31113429 |
ccatttggatcccacaatactcgagggattagtctccgcagttgcgcgcgaaggatacccgatttacacaaaaaaa |
31113504 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 148 - 231
Target Start/End: Original strand, 25983752 - 25983835
Alignment:
| Q |
148 |
cttgccgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggtttacaccaaaaaa |
231 |
Q |
| |
|
||||||| ||||||| |||||| |||| ||||| |||||||||||||||||| | ||||||||||| |||||||||| ||||| |
|
|
| T |
25983752 |
cttgccgcccatttgagtcccataatgttcgagtgattagtctccgcagttgcacacggaggatacccggtttacacccaaaaa |
25983835 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 150 - 221
Target Start/End: Complemental strand, 30785038 - 30784967
Alignment:
| Q |
150 |
tgccgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggttta |
221 |
Q |
| |
|
|||| ||||||| |||| ||||||| || ||||||||||||||||||||| |||||||||||||| |||||| |
|
|
| T |
30785038 |
tgccatccatttaggtctcacaatgttcaagggattagtctccgcagttgcgcgcggaggatacctggttta |
30784967 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 153 - 231
Target Start/End: Original strand, 29553631 - 29553709
Alignment:
| Q |
153 |
cgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggtttacaccaaaaaa |
231 |
Q |
| |
|
||||||||||||||||| ||||||| || |||||||||| ||||||||||| |||||||||| | ||||| ||||||| |
|
|
| T |
29553631 |
cgtccatttgggtcccagaatgctcaagagattagtctctgcagttgtgcgtggaggatacccagattacaacaaaaaa |
29553709 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 198
Target Start/End: Original strand, 36212984 - 36213033
Alignment:
| Q |
149 |
ttgccgtccatttgggtcccacaatgctcgagggattagtctccgcagtt |
198 |
Q |
| |
|
|||||| |||||| ||||||||||||||||||||||| |||||||||||| |
|
|
| T |
36212984 |
ttgccgcccatttaggtcccacaatgctcgagggattggtctccgcagtt |
36213033 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 227
Target Start/End: Complemental strand, 373817 - 373739
Alignment:
| Q |
149 |
ttgccgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggtttacaccaa |
227 |
Q |
| |
|
|||||||| ||||||||| |||||| || |||||||| |||||||||||| || ||||||||||| |||||||||| |
|
|
| T |
373817 |
ttgccgtctatttgggtcatacaatgttcaagggattaatctccgcagttgcgcacggaggatacccaatttacaccaa |
373739 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 289 - 336
Target Start/End: Original strand, 6796801 - 6796848
Alignment:
| Q |
289 |
aattcatggcaagatggagtatatggaacaaactgtccaattccacca |
336 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||| ||||||||| |
|
|
| T |
6796801 |
aattcatggcaagatggagtactgggaacaaactgtcctattccacca |
6796848 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 66; Significance: 5e-29; HSPs: 21)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 8757441 - 8757514
Alignment:
| Q |
158 |
atttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggtttacaccaaaaaa |
231 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| |
|
|
| T |
8757441 |
atttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttacaccaaaaaa |
8757514 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 150 - 231
Target Start/End: Original strand, 20861337 - 20861418
Alignment:
| Q |
150 |
tgccgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggtttacaccaaaaaa |
231 |
Q |
| |
|
||||| |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |
|
|
| T |
20861337 |
tgccgcccatttgggttccataatgctcgagggattagtctccgcagttgtgcgcggaggatacccagtttataccaaaaaa |
20861418 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 150 - 231
Target Start/End: Original strand, 27763810 - 27763891
Alignment:
| Q |
150 |
tgccgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggtttacaccaaaaaa |
231 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||| | ||||||||| |||||| |
|
|
| T |
27763810 |
tgccgtccatttgagtcccacaatgctcgagggattagtctccgcagttgcgcgcagaggatatccggtttacacaaaaaaa |
27763891 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 150 - 231
Target Start/End: Complemental strand, 30996017 - 30995936
Alignment:
| Q |
150 |
tgccgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggtttacaccaaaaaa |
231 |
Q |
| |
|
||||| |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||| ||||| |
|
|
| T |
30996017 |
tgccgcccatctgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatatctggtttacacctaaaaa |
30995936 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 148 - 231
Target Start/End: Original strand, 25224786 - 25224869
Alignment:
| Q |
148 |
cttgccgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggtttacaccaaaaaa |
231 |
Q |
| |
|
||||||| |||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||| ||||| |
|
|
| T |
25224786 |
cttgccgcccatttaggtcccacaatgctcaagggattagtctccgcagttgcacgcggaggatacccggtttacacccaaaaa |
25224869 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 152 - 231
Target Start/End: Original strand, 1642697 - 1642776
Alignment:
| Q |
152 |
ccgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggtttacaccaaaaaa |
231 |
Q |
| |
|
|||||||||||||||||||||| || ||||||||||| |||||||||| |||||||||||| | | |||||||||||||| |
|
|
| T |
1642697 |
ccgtccatttgggtcccacaatacttgagggattagtttccgcagttgcgcgcggaggatatccgatttacaccaaaaaa |
1642776 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 148 - 231
Target Start/End: Complemental strand, 48204365 - 48204282
Alignment:
| Q |
148 |
cttgccgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggtttacaccaaaaaa |
231 |
Q |
| |
|
|||| ||||||||||||| ||||||||||| |||||||||| |||||||||| |||||||||||||| | |||||||| ||||| |
|
|
| T |
48204365 |
cttgtcgtccatttgggttccacaatgctcaagggattagtttccgcagttgcgcgcggaggatacccgatttacacccaaaaa |
48204282 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 156 - 231
Target Start/End: Original strand, 55123192 - 55123267
Alignment:
| Q |
156 |
ccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggtttacaccaaaaaa |
231 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||| | |||| ||||||||| |
|
|
| T |
55123192 |
ccatttgggtctcacaatgctcgagggattagtcttcgcagttgcgcgcggaggatacctgatttataccaaaaaa |
55123267 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 148 - 231
Target Start/End: Original strand, 38331215 - 38331299
Alignment:
| Q |
148 |
cttgccgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggtttac-accaaaaaa |
231 |
Q |
| |
|
||||||| ||||||||||||||||||| | |||||||||||||||||||||| ||||||||||||| | ||||| ||||||||| |
|
|
| T |
38331215 |
cttgccgcccatttgggtcccacaatgtttgagggattagtctccgcagttgcacgcggaggatacccgatttacaaccaaaaaa |
38331299 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 148 - 230
Target Start/End: Original strand, 22288322 - 22288404
Alignment:
| Q |
148 |
cttgccgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggtttacaccaaaaa |
230 |
Q |
| |
|
|||| |||||||||| || |||||| ||| ||| ||||||||| |||||||||||||||||||||| ||||||||| ||||| |
|
|
| T |
22288322 |
cttgtcgtccatttgagttacacaatactcaaggaattagtctctgcagttgtgcgcggaggatacccggtttacacaaaaaa |
22288404 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 40318482 - 40318426
Alignment:
| Q |
169 |
acaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggtttacacc |
225 |
Q |
| |
|
|||||| |||||||||||||||||||||||| |||||||||||||| | |||||||| |
|
|
| T |
40318482 |
acaatgttcgagggattagtctccgcagttgcgcgcggaggatacccgttttacacc |
40318426 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 149 - 231
Target Start/End: Complemental strand, 44941317 - 44941236
Alignment:
| Q |
149 |
ttgccgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggtttacaccaaaaaa |
231 |
Q |
| |
|
|||||| |||||||| ||||| |||||||||| ||||||||||||||||| |||||||||||| | ||||| ||||||||| |
|
|
| T |
44941317 |
ttgccgcccatttggatcccattatgctcgagg-attagtctccgcagttgcgcgcggaggatatccagtttataccaaaaaa |
44941236 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 149 - 192
Target Start/End: Original strand, 15446084 - 15446127
Alignment:
| Q |
149 |
ttgccgtccatttgggtcccacaatgctcgagggattagtctcc |
192 |
Q |
| |
|
|||||||||||||||||| |||||||||||| |||||||||||| |
|
|
| T |
15446084 |
ttgccgtccatttgggtctcacaatgctcgacggattagtctcc |
15446127 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 183 - 230
Target Start/End: Original strand, 22288643 - 22288690
Alignment:
| Q |
183 |
attagtctccgcagttgtgcgcggaggataccgggtttacaccaaaaa |
230 |
Q |
| |
|
||||||||| |||||||||||||||||||||| ||||||||| ||||| |
|
|
| T |
22288643 |
attagtctctgcagttgtgcgcggaggatacccggtttacacaaaaaa |
22288690 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 148 - 231
Target Start/End: Original strand, 40294699 - 40294782
Alignment:
| Q |
148 |
cttgccgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggtttacaccaaaaaa |
231 |
Q |
| |
|
||||||| |||||| ||||||||| ||||| ||||||||||||||||||| || | |||||||| | |||||||||||||| |
|
|
| T |
40294699 |
cttgccgctcatttgaatcccacaatactcgaaggattagtctccgcagttgcgcacaaaggatacccgatttacaccaaaaaa |
40294782 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 231
Target Start/End: Original strand, 46725513 - 46725594
Alignment:
| Q |
149 |
ttgccgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggtttacaccaaaaaa |
231 |
Q |
| |
|
|||| |||||| ||||||| |||||||| |||||||||||||| ||||| ||||||||||||| |||||||||| ||||| |
|
|
| T |
46725513 |
ttgctgtccatctgggtcc-acaatgcttgagggattagtctcttcagttacgcgcggaggatacttggtttacacccaaaaa |
46725594 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 149 - 190
Target Start/End: Original strand, 15283159 - 15283200
Alignment:
| Q |
149 |
ttgccgtccatttgggtcccacaatgctcgagggattagtct |
190 |
Q |
| |
|
|||||| ||||||||||||||||||||||||| ||||||||| |
|
|
| T |
15283159 |
ttgccgcccatttgggtcccacaatgctcgagagattagtct |
15283200 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 157 - 214
Target Start/End: Original strand, 39950308 - 39950365
Alignment:
| Q |
157 |
catttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggatacc |
214 |
Q |
| |
|
||||||| ||| ||||||||||| ||||||||||||||||||| |||||||||||| |
|
|
| T |
39950308 |
catttggatccgacaatgctcgaaggattagtctccgcagttgcatgcggaggatacc |
39950365 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 231
Target Start/End: Original strand, 25739182 - 25739258
Alignment:
| Q |
156 |
ccatttgggtcccacaatgctcgagggattagtctccgca-gttgtgcgcggaggataccgggtttacaccaaaaaa |
231 |
Q |
| |
|
|||||||||||||| || ||||| ||||||||||||| |||| | |||||||||||| |||||||||||||||| |
|
|
| T |
25739182 |
ccatttgggtcccataagactcgataaattagtctccgcaagttgcgtgcggaggatacccggtttacaccaaaaaa |
25739258 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 148 - 214
Target Start/End: Complemental strand, 48211014 - 48210948
Alignment:
| Q |
148 |
cttgccgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggatacc |
214 |
Q |
| |
|
||||||||| |||| ||||||||||| ||||||| ||| |||||||||||| |||||| |||||| |
|
|
| T |
48211014 |
cttgccgtctatttaggtcccacaatactcgaggaattgatctccgcagttgcacgcggaagatacc |
48210948 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 231
Target Start/End: Complemental strand, 43621342 - 43621282
Alignment:
| Q |
171 |
aatgctcgagggattagtctccgcagttgtgcgcggaggataccgggtttacaccaaaaaa |
231 |
Q |
| |
|
||||||||||||||||||||| | ||||| |||| ||||||||| | || ||| ||||||| |
|
|
| T |
43621342 |
aatgctcgagggattagtctctgtagttgcgcgcagaggatacccgattcacaacaaaaaa |
43621282 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0182 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0182
Description:
Target: scaffold0182; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 150 - 232
Target Start/End: Original strand, 26420 - 26502
Alignment:
| Q |
150 |
tgccgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggtttacaccaaaaaag |
232 |
Q |
| |
|
||||| ||||||||||||||||||| ||||| |||||||||||||||||| |||||||||||||| ||||||||||||||||| |
|
|
| T |
26420 |
tgccgcccatttgggtcccacaatgttcgagagattagtctccgcagttgcgcgcggaggatacccggtttacaccaaaaaag |
26502 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 59; Significance: 7e-25; HSPs: 20)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 157 - 231
Target Start/End: Original strand, 16756178 - 16756252
Alignment:
| Q |
157 |
catttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggtttacaccaaaaaa |
231 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | |||||||||||||| |
|
|
| T |
16756178 |
catttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatactcgatttacaccaaaaaa |
16756252 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 42297494 - 42297421
Alignment:
| Q |
150 |
tgccgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggtttaca |
223 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||||| |
|
|
| T |
42297494 |
tgccgtccatttgggtctcacaatgctcgagggattagtctccgcagttgcgcgcggaggatacctagtttaca |
42297421 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 149 - 233
Target Start/End: Original strand, 15642543 - 15642628
Alignment:
| Q |
149 |
ttgccgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggtttaca-ccaaaaaaga |
233 |
Q |
| |
|
|||||| ||||||||||||||||||||||||| ||||| |||||||||||| |||||||||||||| | |||||| |||||||||| |
|
|
| T |
15642543 |
ttgccgcccatttgggtcccacaatgctcgagagattattctccgcagttgcgcgcggaggatacccgatttacatccaaaaaaga |
15642628 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 150 - 231
Target Start/End: Original strand, 36806700 - 36806781
Alignment:
| Q |
150 |
tgccgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggtttacaccaaaaaa |
231 |
Q |
| |
|
||||| |||||||||| ||||||||||||||||||||||||| ||||||| ||||||||||||| |||||||||| ||||| |
|
|
| T |
36806700 |
tgccgcccatttgggttccacaatgctcgagggattagtctctgcagttgcacgcggaggatacccggtttacacccaaaaa |
36806781 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 150 - 231
Target Start/End: Original strand, 49071666 - 49071747
Alignment:
| Q |
150 |
tgccgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggtttacaccaaaaaa |
231 |
Q |
| |
|
|||||| |||||||||||||||||||||||| |||||||||||||||||| | ||||| |||| | | |||||||||||||| |
|
|
| T |
49071666 |
tgccgttcatttgggtcccacaatgctcgagagattagtctccgcagttgcgtgcggaagatatccgatttacaccaaaaaa |
49071747 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 150 - 219
Target Start/End: Original strand, 28724761 - 28724830
Alignment:
| Q |
150 |
tgccgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggtt |
219 |
Q |
| |
|
||||||||||||| |||| |||||| |||||||||||||||||||| ||| |||||||||||||| |||| |
|
|
| T |
28724761 |
tgccgtccatttgagtcctacaatgttcgagggattagtctccgcaattgcgcgcggaggatacccggtt |
28724830 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 151 - 214
Target Start/End: Complemental strand, 9781040 - 9780977
Alignment:
| Q |
151 |
gccgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggatacc |
214 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||| |||| ||||| |||||||| ||||| |
|
|
| T |
9781040 |
gccgcccatttgggtcccacaatgctcgagggattagtatccgtagttgggcgcggagaatacc |
9780977 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 166 - 224
Target Start/End: Complemental strand, 18428178 - 18428120
Alignment:
| Q |
166 |
cccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggtttacac |
224 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||| |||||||||||||| | ||||||| |
|
|
| T |
18428178 |
cccacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccgatttacac |
18428120 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 148 - 225
Target Start/End: Original strand, 46864178 - 46864255
Alignment:
| Q |
148 |
cttgccgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggtttacacc |
225 |
Q |
| |
|
|||||||||||||||||| ||||||| |||||||||||||||| ||||||| |||| |||||||| | |||||||| |
|
|
| T |
46864178 |
cttgccgtccatttgggtttcacaatgttcgagggattagtctctgcagttgcgcgcaaaggatacctgatttacacc |
46864255 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 156 - 231
Target Start/End: Original strand, 22022215 - 22022290
Alignment:
| Q |
156 |
ccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggtttacaccaaaaaa |
231 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||| || |||||||||| || ||||| |||||| |
|
|
| T |
22022215 |
ccatttgggtcccacaatattcgagggattagtctccgcagttgcacgtggaggatacccagtatacacaaaaaaa |
22022290 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 148 - 231
Target Start/End: Original strand, 44913196 - 44913279
Alignment:
| Q |
148 |
cttgccgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggtttacaccaaaaaa |
231 |
Q |
| |
|
||||||| |||| |||||||||||||||||||| |||||||||| |||||| |||| ||||||||| ||||||| |||||| |
|
|
| T |
44913196 |
cttgccgcccatctgggtcccacaatgctcgagagattagtctctgcagttacgcgcagaggatacctaatttacacaaaaaaa |
44913279 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 265 - 383
Target Start/End: Complemental strand, 8571971 - 8571853
Alignment:
| Q |
265 |
aggaatggagtgcagcagaggaggaattcatggcaagatggagtatatggaacaaactgtccaattccaccagggcagaactttacttatgttcttcaag |
364 |
Q |
| |
|
||||||||||| |||||||| ||||| |||| |||||||||| | |||||||| ||||| |||||||| || ||||||| || || | ||||||| |
|
|
| T |
8571971 |
aggaatggagtccagcagagaaggaactcatacgaagatggagtgtttggaacaacatgtcccattccacctggaaagaacttcacatacatacttcaag |
8571872 |
T |
|
| Q |
365 |
taaaagatcagattggtag |
383 |
Q |
| |
|
|||||||||| |||||||| |
|
|
| T |
8571871 |
taaaagatcaaattggtag |
8571853 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 191
Target Start/End: Original strand, 12035639 - 12035680
Alignment:
| Q |
150 |
tgccgtccatttgggtcccacaatgctcgagggattagtctc |
191 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
12035639 |
tgccgcccatttgggtcccacaatgctcgagggattagtctc |
12035680 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 215
Target Start/End: Complemental strand, 7242834 - 7242794
Alignment:
| Q |
175 |
ctcgagggattagtctccgcagttgtgcgcggaggataccg |
215 |
Q |
| |
|
||||||||||||||||||||||||| ||||||| ||||||| |
|
|
| T |
7242834 |
ctcgagggattagtctccgcagttgcgcgcggaagataccg |
7242794 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 223
Target Start/End: Original strand, 32534184 - 32534244
Alignment:
| Q |
163 |
ggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggtttaca |
223 |
Q |
| |
|
|||| ||||||||||||| | |||||||||||| ||| |||| ||||||||| |||||||| |
|
|
| T |
32534184 |
ggtctcacaatgctcgagaggttagtctccgcaattgcgcgcagaggatacctggtttaca |
32534244 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 157 - 196
Target Start/End: Complemental strand, 6607739 - 6607700
Alignment:
| Q |
157 |
catttgggtcccacaatgctcgagggattagtctccgcag |
196 |
Q |
| |
|
||||| |||| ||||||||||||||||||||||||||||| |
|
|
| T |
6607739 |
catttaggtctcacaatgctcgagggattagtctccgcag |
6607700 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 156 - 199
Target Start/End: Original strand, 10367599 - 10367642
Alignment:
| Q |
156 |
ccatttgggtcccacaatgctcgagggattagtctccgcagttg |
199 |
Q |
| |
|
|||||||||||| ||||||||||| |||||| |||||||||||| |
|
|
| T |
10367599 |
ccatttgggtccaacaatgctcgaaggattaatctccgcagttg |
10367642 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 172 - 203
Target Start/End: Original strand, 21774671 - 21774702
Alignment:
| Q |
172 |
atgctcgagggattagtctccgcagttgtgcg |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
21774671 |
atgctcgagggattagtctccgcagttgtgcg |
21774702 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 148 - 214
Target Start/End: Original strand, 10750684 - 10750750
Alignment:
| Q |
148 |
cttgccgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggatacc |
214 |
Q |
| |
|
||||||| |||||||| || ||||||| ||||||||||||||| |||||| |||| ||||||||| |
|
|
| T |
10750684 |
cttgccgcccatttggatcgcacaatgttcgagggattagtctttacagttgcgcgcagaggatacc |
10750750 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 39547408 - 39547335
Alignment:
| Q |
158 |
atttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggtttacaccaaaaaa |
231 |
Q |
| |
|
|||| |||| ||||||| |||| |||||| |||||||||||| |||| |||||| | |||||||||| ||||| |
|
|
| T |
39547408 |
atttaggtctcacaatgttcgacggattaatctccgcagttgcgcgcagaggatttccggtttacacccaaaaa |
39547335 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 53; Significance: 3e-21; HSPs: 12)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 151 - 231
Target Start/End: Complemental strand, 12836948 - 12836868
Alignment:
| Q |
151 |
gccgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggtttacaccaaaaaa |
231 |
Q |
| |
|
|||| ||||||||||||||||||||| ||||||||||||||| |||||| |||||||||||||| |||||| ||| ||||| |
|
|
| T |
12836948 |
gccgcccatttgggtcccacaatgcttgagggattagtctccccagttgcgcgcggaggatacccggtttatacccaaaaa |
12836868 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 150 - 228
Target Start/End: Original strand, 12411237 - 12411315
Alignment:
| Q |
150 |
tgccgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggtttacaccaaa |
228 |
Q |
| |
|
||||| |||||| ||||||||||||| ||||||||||||||| |||||| |||||| ||||||| |||||| |||||| |
|
|
| T |
12411237 |
tgccgcccatttaagtcccacaatgcttgagggattagtctccacagttgcgcgcgggggatacccggtttataccaaa |
12411315 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 157 - 231
Target Start/End: Original strand, 21910301 - 21910374
Alignment:
| Q |
157 |
catttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggtttacaccaaaaaa |
231 |
Q |
| |
|
||||| ||||||||||| ||| ||||||||||||||||||||| ||||||||||||| |||||||||| ||||| |
|
|
| T |
21910301 |
catttaggtcccacaatactc-agggattagtctccgcagttgcacgcggaggatacctggtttacacccaaaaa |
21910374 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 153 - 214
Target Start/End: Original strand, 28099335 - 28099396
Alignment:
| Q |
153 |
cgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggatacc |
214 |
Q |
| |
|
|||||||||| || ||| ||||||||||||||||||||||||||||| | |||||||||||| |
|
|
| T |
28099335 |
cgtccatttgagttccataatgctcgagggattagtctccgcagttgcgagcggaggatacc |
28099396 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 152 - 212
Target Start/End: Original strand, 9536858 - 9536918
Alignment:
| Q |
152 |
ccgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggata |
212 |
Q |
| |
|
|||||||||| | | ||||||||||||||||||||||||||||||||| || ||||||||| |
|
|
| T |
9536858 |
ccgtccatttagattccacaatgctcgagggattagtctccgcagttgcgctcggaggata |
9536918 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 21028895 - 21028843
Alignment:
| Q |
149 |
ttgccgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtg |
201 |
Q |
| |
|
|||||| |||||||||| |||||| |||| ||||||||||||||||||||||| |
|
|
| T |
21028895 |
ttgccgcccatttgggtgccacaaggctcaagggattagtctccgcagttgtg |
21028843 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 21029032 - 21028980
Alignment:
| Q |
149 |
ttgccgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtg |
201 |
Q |
| |
|
|||||| |||||||||| |||||| |||| ||||||||||||||||||||||| |
|
|
| T |
21029032 |
ttgccgcccatttgggtgccacaaggctcaagggattagtctccgcagttgtg |
21028980 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 150 - 188
Target Start/End: Original strand, 423744 - 423782
Alignment:
| Q |
150 |
tgccgtccatttgggtcccacaatgctcgagggattagt |
188 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
423744 |
tgccgtccatttgagtcccacaatgctcgagggattagt |
423782 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 150 - 212
Target Start/End: Original strand, 31412211 - 31412273
Alignment:
| Q |
150 |
tgccgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggata |
212 |
Q |
| |
|
||||| |||||||||| |||||||||||||| |||||||||| |||||| || ||||||||| |
|
|
| T |
31412211 |
tgccgcccatttgggttccacaatgctcgagaaattagtctccacagttgcgcacggaggata |
31412273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 158 - 213
Target Start/End: Original strand, 17177235 - 17177290
Alignment:
| Q |
158 |
atttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggatac |
213 |
Q |
| |
|
|||||| || |||||| |||||||||||| |||||| | ||||||||||||||||| |
|
|
| T |
17177235 |
atttggatctcacaatactcgagggattaatctccgtaattgtgcgcggaggatac |
17177290 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 149 - 231
Target Start/End: Original strand, 278479 - 278561
Alignment:
| Q |
149 |
ttgccgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggtttacaccaaaaaa |
231 |
Q |
| |
|
||||||||||||| |||||||||| ||| ||||||||||| | |||||| | ||||||||||| | ||||| |||||||| |
|
|
| T |
278479 |
ttgccgtccatttaggtcccacaaaactcaagggattagtcgtcacagttgcacacggaggatacccgatttaccccaaaaaa |
278561 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 149 - 199
Target Start/End: Original strand, 28933226 - 28933276
Alignment:
| Q |
149 |
ttgccgtccatttgggtcccacaatgctcgagggattagtctccgcagttg |
199 |
Q |
| |
|
|||||| |||||||||| |||||||||||||| || |||| |||||||||| |
|
|
| T |
28933226 |
ttgccgcccatttgggttccacaatgctcgagtgaatagtatccgcagttg |
28933276 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0013 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0013
Description:
Target: scaffold0013; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 157 - 231
Target Start/End: Complemental strand, 29197 - 29123
Alignment:
| Q |
157 |
catttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggataccgggtttacaccaaaaaa |
231 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||| | ||||||| |||||| |
|
|
| T |
29197 |
catttgggtcccacaatgctcgtgggattagtctccacagttgcgcgcggaggatacccgatttacacaaaaaaa |
29123 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0009 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0009
Description:
Target: scaffold0009; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 148 - 214
Target Start/End: Complemental strand, 27279 - 27213
Alignment:
| Q |
148 |
cttgccgtccatttgggtcccacaatgctcgagggattagtctccgcagttgtgcgcggaggatacc |
214 |
Q |
| |
|
||||||| |||||||| || ||| ||||||||||||||||||| |||||||| |||||||||||||| |
|
|
| T |
27279 |
cttgccgcccatttggatctcacgatgctcgagggattagtcttcgcagttgcgcgcggaggatacc |
27213 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0071 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0071
Description:
Target: scaffold0071; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 149 - 192
Target Start/End: Complemental strand, 16108 - 16065
Alignment:
| Q |
149 |
ttgccgtccatttgggtcccacaatgctcgagggattagtctcc |
192 |
Q |
| |
|
|||||||||||||||||| |||||||||||| |||||||||||| |
|
|
| T |
16108 |
ttgccgtccatttgggtctcacaatgctcgacggattagtctcc |
16065 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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