View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2358_low_4 (Length: 263)
Name: NF2358_low_4
Description: NF2358
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2358_low_4 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 30 - 263
Target Start/End: Original strand, 39924172 - 39924405
Alignment:
| Q |
30 |
tatacagaaaattttattgtcttcttgtctagctcaaaatagaaaatgatgccctacaaatttattcaagataggaatcacctccatttttggnnnnnnn |
129 |
Q |
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| T |
39924172 |
tatacagaaaattttattgtcttcttgtctagctcaaaatagaaaatgatgccctacaaatttattcaagataggaatcacctccatttttggaaaaaaa |
39924271 |
T |
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| Q |
130 |
ctatcacattcccttagattttgagattttcagcagaatccaaaggcacacttgcacaaatcaagttgatgcttacgtacttcttcttccaattgggcac |
229 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39924272 |
ctatcacattcccttagattttgagattttcagcagaatccaaaggcacacttgcacaaatcaagttgatgcttacgtacttcttcttccaattgggcac |
39924371 |
T |
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| Q |
230 |
ttcattttcctttgaatcatatgtctcagctcac |
263 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
39924372 |
ttcattttcctttgaatcatatgtctcagctcac |
39924405 |
T |
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