View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2359_high_1 (Length: 563)

Name: NF2359_high_1
Description: NF2359
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2359_high_1
NF2359_high_1
[»] chr3 (49 HSPs)
chr3 (19-548)||(14544703-14545231)
chr3 (181-311)||(45221431-45221560)
chr3 (181-311)||(2270911-2271040)
chr3 (183-311)||(12254522-12254648)
chr3 (185-316)||(12962053-12962182)
chr3 (181-312)||(5840646-5840776)
chr3 (188-311)||(12356663-12356786)
chr3 (189-311)||(18719759-18719879)
chr3 (181-311)||(2249687-2249812)
chr3 (188-311)||(11306433-11306555)
chr3 (60-313)||(12148119-12148368)
chr3 (60-313)||(12152245-12152494)
chr3 (138-311)||(31691270-31691444)
chr3 (138-311)||(31942773-31942947)
chr3 (188-312)||(11965553-11965678)
chr3 (185-311)||(14648924-14649045)
chr3 (190-311)||(18757696-18757815)
chr3 (181-261)||(40521-40601)
chr3 (181-247)||(54900762-54900828)
chr3 (143-311)||(18136937-18137102)
chr3 (184-251)||(13303919-13303985)
chr3 (184-251)||(13314595-13314661)
chr3 (184-251)||(13325510-13325576)
chr3 (376-429)||(40516681-40516734)
chr3 (243-311)||(12469598-12469665)
chr3 (183-311)||(18130483-18130606)
chr3 (229-312)||(10609432-10609514)
chr3 (201-311)||(11851402-11851509)
chr3 (185-251)||(17244347-17244413)
chr3 (201-311)||(20187027-20187134)
chr3 (181-311)||(24123988-24124116)
chr3 (227-311)||(8584073-8584153)
chr3 (227-311)||(14012878-14012958)
chr3 (227-311)||(14089250-14089330)
chr3 (227-311)||(49398790-49398870)
chr3 (179-250)||(13037594-13037663)
chr3 (179-250)||(13043959-13044028)
chr3 (181-221)||(12201808-12201847)
chr3 (201-261)||(22163167-22163227)
chr3 (227-311)||(13969580-13969660)
chr3 (227-311)||(13975059-13975139)
chr3 (143-249)||(15935632-15935738)
chr3 (436-518)||(20132116-20132198)
chr3 (180-218)||(24285122-24285159)
chr3 (181-249)||(49162597-49162666)
chr3 (181-248)||(29550303-29550371)
chr3 (181-217)||(12273702-12273737)
chr3 (201-261)||(16830678-16830737)
chr3 (181-221)||(17210516-17210555)
[»] scaffold0067 (3 HSPs)
scaffold0067 (19-311)||(56958-57249)
scaffold0067 (19-311)||(47924-48215)
scaffold0067 (19-311)||(63344-63635)
[»] chr7 (50 HSPs)
chr7 (19-311)||(15086552-15086841)
chr7 (19-311)||(32770739-32771030)
chr7 (181-312)||(16184996-16185126)
chr7 (181-311)||(11395347-11395476)
chr7 (181-311)||(46349405-46349534)
chr7 (188-312)||(16188416-16188539)
chr7 (188-311)||(3290438-3290559)
chr7 (180-311)||(14946468-14946600)
chr7 (180-311)||(15374061-15374193)
chr7 (180-311)||(21232682-21232812)
chr7 (60-311)||(11882061-11882305)
chr7 (185-311)||(38827091-38827212)
chr7 (181-261)||(125251-125331)
chr7 (185-311)||(10305323-10305448)
chr7 (188-311)||(6411220-6411343)
chr7 (185-311)||(10308653-10308774)
chr7 (183-311)||(18959160-18959287)
chr7 (184-261)||(21744430-21744507)
chr7 (185-261)||(10306080-10306156)
chr7 (188-311)||(36306765-36306887)
chr7 (184-261)||(8775222-8775299)
chr7 (180-261)||(12546610-12546690)
chr7 (22-66)||(3327385-3327429)
chr7 (179-218)||(15141667-15141706)
chr7 (227-312)||(4279280-4279361)
chr7 (201-311)||(15338236-15338343)
chr7 (185-247)||(16952963-16953025)
chr7 (227-311)||(19615613-19615693)
chr7 (184-221)||(4988349-4988386)
chr7 (184-221)||(4992447-4992484)
chr7 (143-218)||(19145027-19145102)
chr7 (143-218)||(20744426-20744501)
chr7 (143-217)||(14256429-14256503)
chr7 (143-217)||(14266638-14266712)
chr7 (179-218)||(16476766-16476804)
chr7 (180-218)||(12694074-12694111)
chr7 (180-218)||(16576138-16576175)
chr7 (180-218)||(16589487-16589524)
chr7 (181-247)||(16946359-16946425)
chr7 (181-247)||(37245035-37245100)
chr7 (181-218)||(14583316-14583352)
chr7 (181-218)||(16928631-16928667)
chr7 (181-218)||(16929722-16929758)
chr7 (182-218)||(13677759-13677794)
chr7 (181-221)||(14282265-14282305)
chr7 (181-221)||(14300373-14300413)
chr7 (178-218)||(16074626-16074665)
chr7 (181-250)||(16928295-16928365)
chr7 (143-218)||(19151325-19151400)
chr7 (143-218)||(20750724-20750799)
[»] chr4 (38 HSPs)
chr4 (19-311)||(13451468-13451760)
chr4 (181-316)||(14062308-14062443)
chr4 (181-311)||(16220632-16220761)
chr4 (60-313)||(53905854-53906101)
chr4 (181-300)||(41529727-41529845)
chr4 (181-309)||(42598389-42598516)
chr4 (181-312)||(37839660-37839790)
chr4 (188-311)||(2585825-2585947)
chr4 (172-311)||(40907991-40908130)
chr4 (181-261)||(55503807-55503887)
chr4 (181-311)||(14479864-14479989)
chr4 (184-261)||(4169924-4170001)
chr4 (184-261)||(31132421-31132498)
chr4 (184-261)||(14697647-14697724)
chr4 (185-311)||(18170371-18170494)
chr4 (188-311)||(10687445-10687570)
chr4 (188-311)||(10901085-10901210)
chr4 (178-217)||(10977633-10977672)
chr4 (270-311)||(15154085-15154126)
chr4 (181-311)||(13900282-13900408)
chr4 (227-311)||(15324264-15324346)
chr4 (201-311)||(16151876-16151985)
chr4 (201-311)||(16156022-16156131)
chr4 (198-311)||(38982701-38982811)
chr4 (181-311)||(16229779-16229909)
chr4 (184-251)||(30873255-30873320)
chr4 (143-251)||(18270697-18270805)
chr4 (184-251)||(11846508-11846575)
chr4 (181-250)||(14484965-14485032)
chr4 (181-315)||(15406296-15406429)
chr4 (143-250)||(16484049-16484156)
chr4 (185-250)||(41940000-41940065)
chr4 (372-441)||(24042365-24042434)
chr4 (188-261)||(27904675-27904751)
chr4 (181-218)||(30237220-30237256)
chr4 (181-221)||(13045782-13045821)
chr4 (143-218)||(14820808-14820883)
chr4 (230-311)||(16230353-16230431)
[»] scaffold0104 (3 HSPs)
scaffold0104 (19-311)||(25308-25596)
scaffold0104 (181-247)||(19967-20033)
scaffold0104 (181-247)||(22787-22853)
[»] chr8 (45 HSPs)
chr8 (181-311)||(21322902-21323031)
chr8 (181-311)||(21327490-21327619)
chr8 (181-309)||(44430780-44430906)
chr8 (180-311)||(8415581-8415711)
chr8 (49-162)||(20983999-20984112)
chr8 (181-311)||(22176544-22176673)
chr8 (181-261)||(44494694-44494774)
chr8 (181-261)||(7302264-7302344)
chr8 (181-311)||(5239403-5239534)
chr8 (184-261)||(45136051-45136128)
chr8 (181-261)||(6609363-6609443)
chr8 (188-311)||(21281386-21281508)
chr8 (186-261)||(28852878-28852953)
chr8 (181-312)||(36601027-36601155)
chr8 (185-311)||(20984511-20984633)
chr8 (185-311)||(21986245-21986364)
chr8 (181-311)||(21668259-21668388)
chr8 (188-308)||(20840583-20840698)
chr8 (183-312)||(22988964-22989091)
chr8 (181-296)||(34949581-34949694)
chr8 (181-311)||(22064236-22064366)
chr8 (185-259)||(22248468-22248542)
chr8 (181-311)||(11773636-11773763)
chr8 (185-311)||(21981326-21981445)
chr8 (185-311)||(22003453-22003572)
chr8 (185-311)||(22011789-22011908)
chr8 (183-312)||(41010115-41010241)
chr8 (181-311)||(20784522-20784648)
chr8 (372-429)||(26838001-26838058)
chr8 (181-311)||(31419396-31419526)
chr8 (183-251)||(14595428-14595495)
chr8 (181-311)||(23824391-23824519)
chr8 (185-251)||(21968486-21968550)
chr8 (143-250)||(25625390-25625496)
chr8 (227-311)||(30767729-30767809)
chr8 (271-311)||(22176709-22176749)
chr8 (143-218)||(33087583-33087658)
chr8 (233-312)||(22385455-22385532)
chr8 (181-250)||(17053055-17053124)
chr8 (198-251)||(25110309-25110362)
chr8 (181-214)||(11252545-11252578)
chr8 (179-216)||(22743194-22743230)
chr8 (181-218)||(24708826-24708862)
chr8 (199-251)||(27889307-27889359)
chr8 (199-251)||(27947965-27948017)
[»] chr1 (35 HSPs)
chr1 (181-314)||(29555089-29555221)
chr1 (180-311)||(2341665-2341795)
chr1 (181-311)||(19858561-19858690)
chr1 (181-313)||(43631461-43631592)
chr1 (181-312)||(11944474-11944604)
chr1 (181-311)||(20824994-20825123)
chr1 (227-311)||(29240490-29240573)
chr1 (181-312)||(19852425-19852555)
chr1 (181-311)||(20838813-20838942)
chr1 (202-311)||(21729582-21729690)
chr1 (181-311)||(23196232-23196359)
chr1 (181-311)||(19667388-19667515)
chr1 (188-312)||(20639659-20639778)
chr1 (188-311)||(21663555-21663676)
chr1 (181-311)||(20032646-20032771)
chr1 (172-312)||(3707389-3707529)
chr1 (181-312)||(19664764-19664895)
chr1 (143-217)||(21987633-21987707)
chr1 (143-250)||(21746382-21746488)
chr1 (144-311)||(11141632-11141796)
chr1 (143-251)||(21411309-21411417)
chr1 (181-251)||(47483551-47483622)
chr1 (185-251)||(18710156-18710222)
chr1 (179-275)||(31928074-31928169)
chr1 (227-312)||(42096682-42096763)
chr1 (143-248)||(7793407-7793511)
chr1 (185-251)||(20848482-20848547)
chr1 (181-247)||(21541337-21541403)
chr1 (181-311)||(24109709-24109839)
chr1 (373-441)||(1173946-1174013)
chr1 (179-218)||(20087156-20087194)
chr1 (180-218)||(23711949-23711986)
chr1 (181-218)||(21697612-21697648)
chr1 (181-218)||(23630430-23630466)
chr1 (143-214)||(15317131-15317202)
[»] scaffold0011 (5 HSPs)
scaffold0011 (181-312)||(257897-258027)
scaffold0011 (181-312)||(251278-251408)
scaffold0011 (181-311)||(146407-146530)
scaffold0011 (181-310)||(57422-57544)
scaffold0011 (227-311)||(175340-175420)
[»] chr5 (34 HSPs)
chr5 (181-312)||(22759853-22759983)
chr5 (188-311)||(22233294-22233416)
chr5 (181-311)||(6728905-6729034)
chr5 (181-313)||(19075368-19075499)
chr5 (188-311)||(22237858-22237980)
chr5 (181-312)||(31253679-31253809)
chr5 (188-313)||(22008544-22008668)
chr5 (60-218)||(426698-426857)
chr5 (185-311)||(43244399-43244520)
chr5 (181-261)||(22879989-22880069)
chr5 (188-311)||(21661751-21661872)
chr5 (181-311)||(33474543-33474670)
chr5 (184-261)||(43120134-43120211)
chr5 (185-312)||(27636280-27636405)
chr5 (143-311)||(21574626-21574791)
chr5 (184-261)||(43123667-43123744)
chr5 (201-312)||(30344822-30344930)
chr5 (181-311)||(21676212-21676340)
chr5 (201-311)||(22509827-22509934)
chr5 (201-311)||(24669700-24669807)
chr5 (201-311)||(24739469-24739576)
chr5 (201-311)||(24752238-24752345)
chr5 (233-311)||(241-317)
chr5 (227-311)||(1858285-1858365)
chr5 (186-311)||(20831095-20831218)
chr5 (227-312)||(20936979-20937064)
chr5 (181-251)||(23562259-23562328)
chr5 (181-250)||(20842619-20842687)
chr5 (227-311)||(22313534-22313618)
chr5 (178-218)||(21905951-21905990)
chr5 (180-249)||(25013075-25013142)
chr5 (201-311)||(758924-759029)
chr5 (180-218)||(18818381-18818418)
chr5 (201-261)||(34828449-34828509)
[»] chr6 (41 HSPs)
chr6 (181-311)||(2707771-2707900)
chr6 (60-249)||(24720039-24720227)
chr6 (185-311)||(14595322-14595447)
chr6 (181-311)||(28707340-28707469)
chr6 (227-311)||(14723772-14723855)
chr6 (183-312)||(14384076-14384202)
chr6 (181-311)||(24514480-24514609)
chr6 (183-311)||(14375968-14376093)
chr6 (183-311)||(19589233-19589358)
chr6 (188-312)||(14616922-14617045)
chr6 (181-311)||(22757660-22757789)
chr6 (181-312)||(8768817-8768948)
chr6 (188-312)||(19448683-19448806)
chr6 (188-312)||(19450677-19450800)
chr6 (185-312)||(23235639-23235765)
chr6 (181-311)||(19439102-19439230)
chr6 (60-218)||(19472867-19473026)
chr6 (188-309)||(23236055-23236173)
chr6 (185-311)||(7428732-7428852)
chr6 (188-311)||(19457065-19457187)
chr6 (188-311)||(19467210-19467332)
chr6 (179-218)||(18316683-18316722)
chr6 (227-311)||(24561600-24561680)
chr6 (181-249)||(8761080-8761149)
chr6 (185-311)||(9623379-9623499)
chr6 (181-308)||(19818296-19818422)
chr6 (188-311)||(21717572-21717695)
chr6 (188-311)||(21725408-21725531)
chr6 (201-311)||(5295282-5295389)
chr6 (181-313)||(21794124-21794254)
chr6 (181-218)||(23954799-23954836)
chr6 (143-249)||(25395441-25395546)
chr6 (181-250)||(19787526-19787595)
chr6 (181-218)||(8717845-8717881)
chr6 (181-218)||(16804029-16804065)
chr6 (181-218)||(16811874-16811910)
chr6 (181-218)||(16828895-16828931)
chr6 (181-218)||(29491817-29491853)
chr6 (181-250)||(12166691-12166761)
chr6 (201-261)||(31249716-31249776)
chr6 (178-218)||(35244002-35244041)
[»] scaffold0015 (1 HSPs)
scaffold0015 (181-312)||(172461-172587)
[»] scaffold0072 (1 HSPs)
scaffold0072 (181-311)||(55316-55444)
[»] chr2 (38 HSPs)
chr2 (181-311)||(25036743-25036872)
chr2 (181-311)||(25040850-25040979)
chr2 (181-311)||(8688168-8688297)
chr2 (181-311)||(23029685-23029814)
chr2 (172-311)||(22809289-22809426)
chr2 (183-313)||(24942793-24942922)
chr2 (183-311)||(20723429-20723554)
chr2 (185-313)||(28972016-28972143)
chr2 (183-311)||(19715463-19715589)
chr2 (183-311)||(19720026-19720152)
chr2 (143-311)||(22859688-22859852)
chr2 (183-313)||(19791930-19792058)
chr2 (79-311)||(23672730-23672958)
chr2 (201-311)||(23296911-23297020)
chr2 (181-261)||(24503642-24503722)
chr2 (60-251)||(24644246-24644436)
chr2 (188-311)||(24651726-24651847)
chr2 (181-261)||(31754898-31754978)
chr2 (181-312)||(20964653-20964781)
chr2 (181-261)||(6031612-6031692)
chr2 (229-309)||(23290325-23290404)
chr2 (188-311)||(19655078-19655196)
chr2 (198-311)||(22797343-22797453)
chr2 (181-251)||(25108124-25108194)
chr2 (181-261)||(19795948-19796027)
chr2 (181-251)||(25590822-25590893)
chr2 (181-312)||(43692711-43692840)
chr2 (181-251)||(23061947-23062016)
chr2 (181-247)||(27368261-27368327)
chr2 (227-311)||(199959-200039)
chr2 (227-311)||(6745103-6745183)
chr2 (227-311)||(17967051-17967131)
chr2 (184-251)||(25266752-25266817)
chr2 (181-251)||(8890631-8890699)
chr2 (143-217)||(17633260-17633334)
chr2 (181-251)||(38932216-38932284)
chr2 (178-218)||(21124607-21124646)
chr2 (201-261)||(26883575-26883635)
[»] scaffold0074 (1 HSPs)
scaffold0074 (181-311)||(16341-16471)
[»] scaffold0679 (2 HSPs)
scaffold0679 (181-311)||(3762-3891)
scaffold0679 (244-311)||(1-67)
[»] scaffold0109 (1 HSPs)
scaffold0109 (181-311)||(1267-1396)
[»] scaffold0004 (3 HSPs)
scaffold0004 (143-311)||(320465-320630)
scaffold0004 (60-311)||(130238-130485)
scaffold0004 (227-311)||(326174-326258)
[»] scaffold0706 (1 HSPs)
scaffold0706 (183-313)||(3976-4105)
[»] scaffold0026 (4 HSPs)
scaffold0026 (181-312)||(125120-125251)
scaffold0026 (143-223)||(24109-24188)
scaffold0026 (143-223)||(53001-53080)
scaffold0026 (143-218)||(117516-117591)
[»] scaffold0010 (1 HSPs)
scaffold0010 (188-311)||(38248-38369)
[»] scaffold0574 (1 HSPs)
scaffold0574 (181-311)||(6551-6681)
[»] scaffold0037 (1 HSPs)
scaffold0037 (181-311)||(37204-37333)
[»] scaffold0516 (1 HSPs)
scaffold0516 (181-311)||(8206-8334)
[»] scaffold0003 (2 HSPs)
scaffold0003 (181-311)||(136777-136905)
scaffold0003 (201-311)||(194502-194609)
[»] scaffold0546 (1 HSPs)
scaffold0546 (227-311)||(10451-10534)
[»] scaffold0002 (1 HSPs)
scaffold0002 (188-311)||(369815-369936)
[»] scaffold0098 (2 HSPs)
scaffold0098 (185-311)||(33533-33658)
scaffold0098 (227-311)||(26730-26813)
[»] scaffold0097 (1 HSPs)
scaffold0097 (183-311)||(27258-27383)
[»] scaffold0323 (1 HSPs)
scaffold0323 (181-312)||(6655-6786)
[»] scaffold0301 (1 HSPs)
scaffold0301 (227-311)||(14108-14191)
[»] scaffold1615 (1 HSPs)
scaffold1615 (181-311)||(1066-1195)
[»] scaffold0235 (2 HSPs)
scaffold0235 (181-311)||(7374-7503)
scaffold0235 (181-311)||(17588-17717)
[»] scaffold0058 (4 HSPs)
scaffold0058 (181-311)||(15887-16015)
scaffold0058 (181-261)||(33866-33946)
scaffold0058 (181-311)||(23391-23519)
scaffold0058 (143-218)||(41103-41178)
[»] scaffold0316 (1 HSPs)
scaffold0316 (185-311)||(198-323)
[»] scaffold0192 (1 HSPs)
scaffold0192 (188-311)||(5989-6112)
[»] scaffold0126 (1 HSPs)
scaffold0126 (183-311)||(37798-37924)
[»] scaffold0342 (1 HSPs)
scaffold0342 (181-311)||(17527-17660)
[»] scaffold0149 (3 HSPs)
scaffold0149 (197-311)||(39079-39192)
scaffold0149 (181-311)||(12298-12423)
scaffold0149 (181-218)||(14482-14518)
[»] scaffold0034 (4 HSPs)
scaffold0034 (188-311)||(18197-18315)
scaffold0034 (188-312)||(7329-7452)
scaffold0034 (201-261)||(50426-50486)
scaffold0034 (201-261)||(71692-71752)
[»] scaffold0512 (1 HSPs)
scaffold0512 (181-261)||(12019-12099)
[»] scaffold0001 (2 HSPs)
scaffold0001 (190-311)||(95245-95364)
scaffold0001 (201-261)||(494657-494717)
[»] scaffold0025 (1 HSPs)
scaffold0025 (181-311)||(70486-70618)
[»] scaffold0167 (1 HSPs)
scaffold0167 (188-311)||(6323-6444)
[»] scaffold0141 (1 HSPs)
scaffold0141 (184-261)||(32088-32165)
[»] scaffold0049 (2 HSPs)
scaffold0049 (184-261)||(82647-82724)
scaffold0049 (143-218)||(54083-54158)
[»] scaffold0367 (1 HSPs)
scaffold0367 (188-311)||(7934-8055)
[»] scaffold0211 (1 HSPs)
scaffold0211 (185-311)||(8716-8839)
[»] scaffold0076 (3 HSPs)
scaffold0076 (186-298)||(52357-52465)
scaffold0076 (227-311)||(30924-31004)
scaffold0076 (227-311)||(36325-36405)
[»] scaffold0309 (2 HSPs)
scaffold0309 (201-312)||(20194-20305)
scaffold0309 (178-250)||(5334-5404)
[»] scaffold0022 (2 HSPs)
scaffold0022 (189-311)||(39361-39483)
scaffold0022 (189-311)||(137421-137543)
[»] scaffold0188 (1 HSPs)
scaffold0188 (181-311)||(32277-32406)
[»] scaffold0120 (1 HSPs)
scaffold0120 (188-312)||(5822-5944)
[»] scaffold0016 (1 HSPs)
scaffold0016 (185-311)||(173702-173821)
[»] scaffold1340 (1 HSPs)
scaffold1340 (181-311)||(1795-1922)
[»] scaffold0334 (1 HSPs)
scaffold0334 (185-311)||(7859-7983)
[»] scaffold0243 (2 HSPs)
scaffold0243 (188-311)||(8687-8810)
scaffold0243 (188-311)||(23178-23301)
[»] scaffold0407 (1 HSPs)
scaffold0407 (188-312)||(5022-5145)
[»] scaffold0261 (2 HSPs)
scaffold0261 (181-311)||(11322-11448)
scaffold0261 (181-311)||(19502-19628)
[»] scaffold0203 (2 HSPs)
scaffold0203 (232-311)||(3039-3118)
scaffold0203 (181-299)||(17744-17861)
[»] scaffold0108 (2 HSPs)
scaffold0108 (143-218)||(51051-51126)
scaffold0108 (181-218)||(44960-44996)
[»] scaffold1433 (1 HSPs)
scaffold1433 (178-217)||(225-264)
[»] scaffold0511 (1 HSPs)
scaffold0511 (179-218)||(667-706)
[»] scaffold0106 (3 HSPs)
scaffold0106 (181-312)||(28106-28231)
scaffold0106 (227-311)||(37719-37799)
scaffold0106 (268-311)||(47437-47480)
[»] scaffold0031 (2 HSPs)
scaffold0031 (181-251)||(74839-74910)
scaffold0031 (184-246)||(108335-108396)
[»] scaffold0028 (3 HSPs)
scaffold0028 (188-313)||(53127-53249)
scaffold0028 (188-311)||(47721-47841)
scaffold0028 (143-251)||(64381-64488)
[»] scaffold0008 (2 HSPs)
scaffold0008 (188-312)||(28940-29063)
scaffold0008 (143-217)||(125605-125679)
[»] scaffold0355 (1 HSPs)
scaffold0355 (188-312)||(2189-2309)
[»] scaffold0326 (5 HSPs)
scaffold0326 (179-311)||(7921-8050)
scaffold0326 (179-311)||(15823-15952)
scaffold0326 (201-251)||(1101-1150)
scaffold0326 (181-218)||(6081-6117)
scaffold0326 (181-218)||(13983-14019)
[»] scaffold0462 (1 HSPs)
scaffold0462 (143-218)||(9948-10023)
[»] scaffold0138 (1 HSPs)
scaffold0138 (181-261)||(387-466)
[»] scaffold0113 (1 HSPs)
scaffold0113 (181-311)||(27432-27559)
[»] scaffold0053 (2 HSPs)
scaffold0053 (143-218)||(73531-73606)
scaffold0053 (178-218)||(61679-61718)
[»] scaffold0023 (1 HSPs)
scaffold0023 (185-311)||(157432-157554)
[»] scaffold0827 (1 HSPs)
scaffold0827 (143-251)||(1538-1645)
[»] scaffold0222 (2 HSPs)
scaffold0222 (185-251)||(22093-22159)
scaffold0222 (184-249)||(27430-27493)
[»] scaffold0205 (1 HSPs)
scaffold0205 (181-251)||(23784-23852)
[»] scaffold1488 (1 HSPs)
scaffold1488 (227-311)||(122-202)
[»] scaffold0708 (1 HSPs)
scaffold0708 (227-311)||(211-291)
[»] scaffold0139 (1 HSPs)
scaffold0139 (181-251)||(16710-16779)
[»] scaffold0050 (1 HSPs)
scaffold0050 (227-311)||(87128-87208)
[»] scaffold1098 (1 HSPs)
scaffold1098 (143-223)||(1293-1372)
[»] scaffold0664 (1 HSPs)
scaffold0664 (271-308)||(730-767)
[»] scaffold0094 (1 HSPs)
scaffold0094 (185-311)||(50510-50632)
[»] scaffold0490 (1 HSPs)
scaffold0490 (178-250)||(4159-4229)
[»] scaffold0331 (1 HSPs)
scaffold0331 (229-313)||(17897-17980)
[»] scaffold0124 (1 HSPs)
scaffold0124 (181-221)||(15281-15320)
[»] scaffold0102 (1 HSPs)
scaffold0102 (181-251)||(44023-44091)
[»] scaffold0005 (3 HSPs)
scaffold0005 (271-311)||(258134-258174)
scaffold0005 (271-311)||(264499-264539)
scaffold0005 (143-218)||(18826-18901)
[»] scaffold1684 (1 HSPs)
scaffold1684 (181-315)||(872-1005)
[»] scaffold1405 (1 HSPs)
scaffold1405 (196-251)||(1564-1619)
[»] scaffold1311 (1 HSPs)
scaffold1311 (272-311)||(1725-1764)
[»] scaffold0751 (1 HSPs)
scaffold0751 (179-218)||(6532-6570)
[»] scaffold0348 (1 HSPs)
scaffold0348 (181-219)||(14244-14283)
[»] scaffold0947 (1 HSPs)
scaffold0947 (188-218)||(478-508)
[»] scaffold0556 (1 HSPs)
scaffold0556 (185-311)||(5629-5752)
[»] scaffold0506 (1 HSPs)
scaffold0506 (233-311)||(7811-7887)
[»] scaffold0249 (1 HSPs)
scaffold0249 (185-251)||(8388-8453)
[»] scaffold0244 (2 HSPs)
scaffold0244 (180-218)||(8997-9034)
scaffold0244 (180-218)||(20115-20152)
[»] scaffold0201 (1 HSPs)
scaffold0201 (180-218)||(25701-25738)
[»] scaffold0130 (1 HSPs)
scaffold0130 (180-218)||(12146-12183)
[»] scaffold0054 (1 HSPs)
scaffold0054 (180-218)||(62450-62487)
[»] scaffold0742 (1 HSPs)
scaffold0742 (275-312)||(3054-3091)
[»] scaffold0239 (1 HSPs)
scaffold0239 (233-310)||(15198-15273)
[»] scaffold0091 (2 HSPs)
scaffold0091 (181-218)||(23369-23405)
scaffold0091 (181-218)||(27566-27602)
[»] scaffold0634 (1 HSPs)
scaffold0634 (184-251)||(2021-2088)
[»] scaffold0160 (1 HSPs)
scaffold0160 (271-311)||(7569-7609)
[»] scaffold0154 (1 HSPs)
scaffold0154 (188-247)||(29201-29259)
[»] scaffold0060 (1 HSPs)
scaffold0060 (181-251)||(40674-40745)
[»] scaffold0046 (1 HSPs)
scaffold0046 (181-221)||(79031-79071)
[»] scaffold0021 (1 HSPs)
scaffold0021 (271-311)||(140729-140769)


Alignment Details
Target: chr3 (Bit Score: 482; Significance: 0; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 482; E-Value: 0
Query Start/End: Original strand, 19 - 548
Target Start/End: Original strand, 14544703 - 14545231
Alignment:
Q  19 tggaacttgatgttgtagccctatgtttgtttgaattatcggattatggttttactttggtgaggcttttataccaagactgttattagagaatcacaca 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  14544703 tggaacttgatgttgtagccctatgtttgtttgaattatcggattatggttttactttggtgaggcttttattccaagactgttattggagaatcacaca 14544802  T
Q  119 tttatgctgttgttattgatgatgaatattccgctgcaaagtttgatgaaactattttggttgatgtttattaaatagtttttatattctatttaagaaa 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  14544803 tttatgctgttgttattgatgatgaatattccgctgcaaagtttgatgaaactgttttggttgatgtttattaaatagtttttatattctatttaagaaa 14544902  T
Q  219 attgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaattgattttgggtaaccgggtgttacacacagtg 318  Q
    ||||||||||||||||||||||||||||||||| ||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  14544903 attgatttatgtagtgtgacatgcccgtttgggaattactctgatg-catgtttatttattattaaattgattttgggtaaccgggtgttacacacaatg 14545001  T
Q  319 gcatgttgcgcagtggcaaaactgatttcataacttccatgagatgtctcgatacacctatgaagttgtctggttagggacgaaataaaattacaacaac 418  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14545002 gcatgttgcgcagtggcaaaactgatttcataacttccatgaggtgtctcgatacacctatgaagttgtctggttagggacgaaataaaattacaacaac 14545101  T
Q  419 tcaaatcaaaacactataaaatggccccaaaattatgagcaacccgtctaaaaatccacaaaattgtcttcaaatacttatcaaatgactcaaaaacata 518  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14545102 tcaaatcaaaacactataaaatggccccaaaattatgagcaacttgtctaaaaatccacaaaattgtcttcaaatacttatcaaatgactcaaaaacata 14545201  T
Q  519 cctaaaatcattattgatgatgtgtcaatt 548  Q
    |||||||||||||||||||| |||||||||    
T  14545202 cctaaaatcattattgatgacgtgtcaatt 14545231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 181 - 311
Target Start/End: Original strand, 45221431 - 45221560
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttatta 280  Q
    |||| ||||||||||| ||||||||||||||||||||||||     ||||||||||||||||||||||||| ||||||||| || |||||||||||||||    
T  45221431 gatgcttattaaatagattttatattctatttaagaaaatttgaaaatgtagtgtgacatgcccgtttgggaattactctgatg-catgtttatttatta 45221529  T
Q  281 ttaaattgattttgggtaaccgggtgttaca 311  Q
     | ||||||||||||| ||| ||||||||||    
T  45221530 attaattgattttgggaaacggggtgttaca 45221560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 181 - 311
Target Start/End: Original strand, 2270911 - 2271040
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttatta 280  Q
    |||||||||||||||||||||||||||||||||||||| ||     |||||||||||||||||||||||||  |||||||| ||| ||||||| ||||||    
T  2270911 gatgtttattaaatagtttttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggatttactctgatgt-atgtttaattatta 2271009  T
Q  281 ttaaattgattttgggtaaccgggtgttaca 311  Q
    || | ||| ||||||||||| ||||||||||    
T  2271010 tttagttgtttttgggtaacggggtgttaca 2271040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 183 - 311
Target Start/End: Complemental strand, 12254648 - 12254522
Alignment:
Q  183 tgtttattaaatagtttttatattctatttaagaaaatt-gatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattat 281  Q
    |||||||||||||||||| |||| |||||||||||| || || ||| | ||||||||||||||||||||| ||||||||| || ||| ||||||||||||    
T  12254648 tgtttattaaatagtttt-atatactatttaagaaattttgaatta-gaagtgtgacatgcccgtttgggaattactctgatg-catatttatttattat 12254552  T
Q  282 taaattgattttgggtaaccgggtgttaca 311  Q
    ||||||||||||||||||| ||||||||||    
T  12254551 taaattgattttgggtaacggggtgttaca 12254522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 185 - 316
Target Start/End: Original strand, 12962053 - 12962182
Alignment:
Q  185 tttattaaatagtttttatattctatttaagaaaatt-gatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattatta 283  Q
    |||||||||||||||| |||| ||||||| |||| || || ||| |||||||||||| |||||||||| ||||||||| || ||||||||||||||||||    
T  12962053 tttattaaatagtttt-atatactatttacgaaattttgaatta-gtagtgtgacatacccgtttgggaattactctgatg-catgtttatttattatta 12962149  T
Q  284 aattgattttgggtaaccgggtgttacacacag 316  Q
    ||||||||||||||||| |||||||||| ||||    
T  12962150 aattgattttgggtaacagggtgttacaaacag 12962182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 181 - 312
Target Start/End: Complemental strand, 5840776 - 5840646
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttatta 280  Q
    |||| ||||||||||| ||||||||||||||||||||||||     ||||||||||||||||||||||||  ||||||||| || |||||||| ||||||    
T  5840776 gatgcttattaaatagattttatattctatttaagaaaatttgaaaatgtagtgtgacatgcccgtttggaaattactctgatg-catgtttaattatta 5840678  T
Q  281 ttaaattgattttgggtaaccgggtgttacac 312  Q
     | ||||||||||||| ||| |||||||||||    
T  5840677 attaattgattttgggaaactgggtgttacac 5840646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 188 - 311
Target Start/End: Original strand, 12356663 - 12356786
Alignment:
Q  188 attaaatagtttttatattctatttaagaaaatt-gatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgttta-tttattattaaa 285  Q
    |||||||||||||||||||||||||||||||||| ||   |||||||||||||||||||||||||  |||||| | |  |||||||| ||||||||| ||    
T  12356663 attaaatagtttttatattctatttaagaaaatttgaa--atgtagtgtgacatgcccgtttgggatttactcagattgcatgtttaatttattatttaa 12356760  T
Q  286 ttgattttgggtaaccgggtgttaca 311  Q
    ||| ||||||||||| ||||||||||    
T  12356761 ttgcttttgggtaacggggtgttaca 12356786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 189 - 311
Target Start/End: Original strand, 18719759 - 18719879
Alignment:
Q  189 ttaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaattg 288  Q
    |||||||| ||||||||||||||||||||| ||     ||||||||||||||||||||||||  ||||||||| ||| |||||||||||||||| |||||    
T  18719759 ttaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttggtaattactctgatgt-atgtttatttattatttaattg 18719857  T
Q  289 attttgggtaaccgggtgttaca 311  Q
     ||||||||||| ||||||||||    
T  18719858 -ttttgggtaacggggtgttaca 18719879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 181 - 311
Target Start/End: Original strand, 2249687 - 2249812
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttatta 280  Q
    |||||||||||||||| ||||||||||||||||||||| ||     ||||||||||||||||||||||||| ||||||||| || |||||||||| |||     
T  2249687 gatgtttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctgatg-catgtttattaatt- 2249784  T
Q  281 ttaaattgattttgggtaaccgggtgttaca 311  Q
       ||||||||||||| ||| ||||||||||    
T  2249785 ---aattgattttgggaaacggggtgttaca 2249812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 188 - 311
Target Start/End: Original strand, 11306433 - 11306555
Alignment:
Q  188 attaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaatt 287  Q
    ||||||||||||||||| ||||||||||||||||     | |||||||||||||||||||||||  |||||||| ||| ||||||| |||||||| ||||    
T  11306433 attaaatagtttttataatctatttaagaaaatttgaaaaagtagtgtgacatgcccgtttgggatttactctgatgt-atgtttaattattatttaatt 11306531  T
Q  288 gattttgggtaaccgggtgttaca 311  Q
    | ||||||||||  ||||||||||    
T  11306532 gcttttgggtaaaggggtgttaca 11306555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 60 - 313
Target Start/End: Complemental strand, 12148368 - 12148119
Alignment:
Q  60 gattatggttttactttggtgaggcttttataccaagactgtt-attagagaatcacacattt-atgctgttgttattgatgatgaatattccgctgcaa 157  Q
    |||||||  |||| |||| |||||||||||| |||||||| || | | |||||||| |||||| ||| ||||||| || ||||  |||||||||||||||    
T  12148368 gattatgaatttattttgatgaggcttttatgccaagactatttagtggagaatcaaacatttgatgttgttgtttttaatgaa-aatattccgctgcaa 12148270  T
Q  158 agttt-gatgaaactattttggttgatgtttattaaatagtttttatattctatttaagaaa-attgatttatgtagtgtgacatgcccgtttggggatt 255  Q
    ||||| ||||||||| |||  |||| |||||||||||||| ||||||| |||||||||||||  ||||   | |||||||||||||||||||||||   |    
T  12148269 agttttgatgaaactgtttatgttgttgtttattaaatag-ttttataatctatttaagaaattttga--aaagtagtgtgacatgcccgtttgggatat 12148173  T
Q  256 actctggtgtcatgtttatttattattaaattgattttgggtaaccgggtgttacaca 313  Q
    |||||| |||     |||||||||||| ||||| |||  | |||| ||||||||||||    
T  12148172 actctgatgt----attatttattatttaattgctttgtgataacggggtgttacaca 12148119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 60 - 313
Target Start/End: Complemental strand, 12152494 - 12152245
Alignment:
Q  60 gattatggttttactttggtgaggcttttataccaagactgtt-attagagaatcacacattt-atgctgttgttattgatgatgaatattccgctgcaa 157  Q
    |||||||  |||| |||| |||||||||||| |||||||| || | | |||||||| |||||| ||| ||||||| || ||||  |||||||||||||||    
T  12152494 gattatgaatttattttgatgaggcttttatgccaagactatttagtggagaatcaaacatttgatgttgttgtttttaatgaa-aatattccgctgcaa 12152396  T
Q  158 agttt-gatgaaactattttggttgatgtttattaaatagtttttatattctatttaagaaa-attgatttatgtagtgtgacatgcccgtttggggatt 255  Q
    ||||| ||||||||| |||  |||| |||||||||||||| ||||||| |||||||||||||  ||||   | |||||||||||||||||||||||   |    
T  12152395 agttttgatgaaactgtttatgttgttgtttattaaatag-ttttataatctatttaagaaattttga--aaagtagtgtgacatgcccgtttgggatat 12152299  T
Q  256 actctggtgtcatgtttatttattattaaattgattttgggtaaccgggtgttacaca 313  Q
    |||||| |||     |||||||||||| ||||| |||  | |||| ||||||||||||    
T  12152298 actctgatgt----attatttattatttaattgctttgtgataacggggtgttacaca 12152245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 138 - 311
Target Start/End: Original strand, 31691270 - 31691444
Alignment:
Q  138 tgatgaatattccgctgcaa-agtttgatgaaactattttggttgat-gtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgt 235  Q
    |||| ||||||||||||||| | ||||||||||| |||   |||| | ||||||||||||||||| |||| |||||||||||| ||      ||||||||    
T  31691270 tgataaatattccgctgcaagattttgatgaaacaattaaagttggttgtttattaaatagtttt-atatgctatttaagaaattttgaaagtgtagtgt 31691368  T
Q  236 gacatgcccgtttggggattactctggtgtcatg-tttatttattattaaattgattttgggtaaccgggtgttaca 311  Q
    |||||||||||||||| ||||||||| || |||| |||||||| | || ||||||||||||||||| ||||||||||    
T  31691369 gacatgcccgtttgggaattactctgatg-catgatttatttactgtttaattgattttgggtaacggggtgttaca 31691444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 138 - 311
Target Start/End: Complemental strand, 31942947 - 31942773
Alignment:
Q  138 tgatgaatattccgctgcaa-agtttgatgaaactattttggttgat-gtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgt 235  Q
    |||| ||||||||||||||| | ||||||||||| |||   |||| | ||||||||||||||||| |||| |||||||||||| ||      ||||||||    
T  31942947 tgataaatattccgctgcaagattttgatgaaacgattaaagttggttgtttattaaatagtttt-atatgctatttaagaaattttgaaagtgtagtgt 31942849  T
Q  236 gacatgcccgtttggggattactctggtgtcatg-tttatttattattaaattgattttgggtaaccgggtgttaca 311  Q
    |||||||||||||||| ||||||||| || |||| |||||||| | || ||||||||||||||||| ||||||||||    
T  31942848 gacatgcccgtttgggaattactctgatg-catgatttatttactgtttaattgattttgggtaacggggtgttaca 31942773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 188 - 312
Target Start/End: Original strand, 11965553 - 11965678
Alignment:
Q  188 attaaatagttttt-atattctatttaagaaaatt-gatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttatta-ttaa 284  Q
    |||||||||||||| |||| |||||||||||| || |  ||| |||||||||||||||||||||||  |||||||| ||| |||||||||||||| ||||    
T  11965553 attaaatagttttttatatgctatttaagaaattttggatta-gtagtgtgacatgcccgtttgggatttactctgatgt-atgtttatttattatttaa 11965650  T
Q  285 attgattttgggtaaccgggtgttacac 312  Q
    |||| ||||||||||| |||||||||||    
T  11965651 attgtttttgggtaacggggtgttacac 11965678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 185 - 311
Target Start/End: Original strand, 14648924 - 14649045
Alignment:
Q  185 tttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaa 284  Q
    |||||||||||| ||||||||||||||||| ||| ||     ||||||||||||||||||||||||| ||||||||| || |||||||||| |||    |    
T  14648924 tttattaaatagattttatattctatttaacaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctgatg-catgtttattaatt----a 14649018  T
Q  285 attgattttgggtaaccgggtgttaca 311  Q
    |||||||||||| ||| ||||||||||    
T  14649019 attgattttgggaaacggggtgttaca 14649045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 190 - 311
Target Start/End: Original strand, 18757696 - 18757815
Alignment:
Q  190 taaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaattga 289  Q
    ||||||||||||||||||||||||||||  ||||   |||||||||||||||||||||||||  |||||||| |||  |||||| |||||||| ||||      
T  18757696 taaatagtttttatattctatttaagaattttga-aaatgtagtgtgacatgcccgtttgggttttactctgatgt-gtgtttaattattatttaattac 18757793  T
Q  290 ttttgggtaaccgggtgttaca 311  Q
    |||||||||||  |||||||||    
T  18757794 ttttgggtaacgaggtgttaca 18757815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 181 - 261
Target Start/End: Complemental strand, 40601 - 40521
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaa-attgatttatgtagtgtgacatgcccgtttggggattactctg 261  Q
    |||||||||||||||| |||||||||||||||||||||  ||||   ||||||||||||||||||||||||| |||||||||    
T  40601 gatgtttattaaatagattttatattctatttaagaaatcttga-aaatgtagtgtgacatgcccgtttgggaattactctg 40521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 181 - 247
Target Start/End: Original strand, 54900762 - 54900828
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtt 247  Q
    |||||||||||||||||||||||||||||||||||||| ||     |||||||||||||||||||||    
T  54900762 gatgtttattaaatagtttttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtt 54900828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 143 - 311
Target Start/End: Original strand, 18136937 - 18137102
Alignment:
Q  143 aatattccgctgcaaagttt-gatgaaactattttggttgat-gtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacat 240  Q
    |||||||||||||||||||| |||||||  |||   |||| | ||||||||||| ||||| ||||||||||||||||| ||      |||||||||| ||    
T  18136937 aatattccgctgcaaagttttgatgaaatgattaaagttggttgtttattaaattgtttt-atattctatttaagaaattttgaaagtgtagtgtgatat 18137035  T
Q  241 gcccgtttggggattactctggtgtcatgtttatttattattaaattgattttgggtaaccgggtgttaca 311  Q
    ||||||||||  |||||||||  |     ||||||||||||| ||||||||||||||||| ||||||||||    
T  18137036 gcccgtttggttattactctgacga----tttatttattatttaattgattttgggtaacggggtgttaca 18137102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 13303919 - 13303985
Alignment:
Q  184 gtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggg 251  Q
    ||||||||||||||||| ||||||||||||||||| || |   |||||||||||||||||||||||||    
T  13303919 gtttattaaatagtttt-atattctatttaagaaattttaaaaatgtagtgtgacatgcccgtttggg 13303985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 13314595 - 13314661
Alignment:
Q  184 gtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggg 251  Q
    ||||||||||||||||| ||||||||||||||||| || |   |||||||||||||||||||||||||    
T  13314595 gtttattaaatagtttt-atattctatttaagaaattttaaaaatgtagtgtgacatgcccgtttggg 13314661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 13325510 - 13325576
Alignment:
Q  184 gtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggg 251  Q
    |||||||||||| |||||||||||||||||||||| || |   |||||||||||||||||||||||||    
T  13325510 gtttattaaata-tttttatattctatttaagaaattttaaaaatgtagtgtgacatgcccgtttggg 13325576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 376 - 429
Target Start/End: Original strand, 40516681 - 40516734
Alignment:
Q  376 ctatgaagttgtctggttagggacgaaataaaattacaacaactcaaatcaaaa 429  Q
    ||||||||||||||||||| ||| |||||||||||||||| ||||||| |||||    
T  40516681 ctatgaagttgtctggttaaggaagaaataaaattacaacgactcaaaccaaaa 40516734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 243 - 311
Target Start/End: Original strand, 12469598 - 12469665
Alignment:
Q  243 ccgtttggggattactctggtgtcatgtttatttattattaaattgattttgggtaaccgggtgttaca 311  Q
    |||||||||  |||||||| ||| ||||||||||| |||||||||| ||||||||||| ||||||||||    
T  12469598 ccgtttgggatttactctgatgt-atgtttatttactattaaattgtttttgggtaacagggtgttaca 12469665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 183 - 311
Target Start/End: Original strand, 18130483 - 18130606
Alignment:
Q  183 tgtttattaaatagtttttatattctatttaagaaaatt-gatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattat 281  Q
    |||||||||||||||||| ||||| ||||||||||| || ||  | |||||||||||||||||| ||||   |||||||| ||     ||||||||||||    
T  18130483 tgtttattaaatagtttt-atattttatttaagaaattttgaaat-tgtagtgtgacatgcccgattggttcttactctgatga----tttatttattat 18130576  T
Q  282 taaattgattttgggtaaccgggtgttaca 311  Q
    | |||||||||||||||||  |||||||||    
T  18130577 ttaattgattttgggtaacgtggtgttaca 18130606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 229 - 312
Target Start/End: Original strand, 10609432 - 10609514
Alignment:
Q  229 gtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaattgattttgggtaaccgggtgttacac 312  Q
    ||||||||||||| ||||||||| ||||||||| |||  |||||| |||||| | ||||  ||||||||||| |||||||||||    
T  10609432 gtagtgtgacatgtccgtttgggaattactctgatgt-gtgtttaattattagttaattacttttgggtaacggggtgttacac 10609514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 201 - 311
Target Start/End: Original strand, 11851402 - 11851509
Alignment:
Q  201 tatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaattgattttgggtaac 300  Q
    |||||||||||||||||||||||  | |||||||||||||||||| |||||  |||||||  |||  ||   | |||||||| ||||||||||||| |||    
T  11851402 tatattctatttaagaaaattgaaat-tgtagtgtgacatgcccgattgggttttactctaatgt--tgaacaattattatttaattgattttgggaaac 11851498  T
Q  301 cgggtgttaca 311  Q
     ||||||||||    
T  11851499 ggggtgttaca 11851509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 185 - 251
Target Start/End: Original strand, 17244347 - 17244413
Alignment:
Q  185 tttattaaatagtttttatattctatttaagaaaa-ttgatttatgtagtgtgacatgcccgtttggg 251  Q
    |||||||||||||||| |||||||||||||||||| ||||   ||| |||||||||||||||||||||    
T  17244347 tttattaaatagtttt-atattctatttaagaaaatttgaaaaatgaagtgtgacatgcccgtttggg 17244413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 201 - 311
Target Start/End: Complemental strand, 20187134 - 20187027
Alignment:
Q  201 tatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaattgattttgggtaac 300  Q
    |||||||||||||||||| ||||  | ||||||||||||||||||||||||  |||||| | |||  ||   | |||||||| ||||||||||||| |||    
T  20187134 tatattctatttaagaaatttgaaat-tgtagtgtgacatgcccgtttgggttttactccgatgt--tgaacaattattatttaattgattttgggaaac 20187038  T
Q  301 cgggtgttaca 311  Q
     ||||||||||    
T  20187037 ggggtgttaca 20187027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 181 - 311
Target Start/End: Original strand, 24123988 - 24124116
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaa--ttgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatg-tttattta 277  Q
    |||||||||||||||||||| ||||||||||||||||||  ||||   ||||||||||||||||||| |||||  |||||||| |||  ||  ||| |||    
T  24123988 gatgtttattaaatagtttt-atattctatttaagaaaaatttga-aaatgtagtgtgacatgcccg-ttgggttttactctgatgt--tgaattaatta 24124082  T
Q  278 ttattaaattgattttgggtaaccgggtgttaca 311  Q
    ||||| ||||  ||||||||||| ||||||||||    
T  24124083 ttatttaattacttttgggtaacggggtgttaca 24124116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 311
Target Start/End: Original strand, 8584073 - 8584153
Alignment:
Q  227 atgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaattgattttgggtaaccgggtgttaca 311  Q
    |||||||||||||||||||||||||  |||||||| ||| |||||||   |||||| ||||  ||||||||||| ||||||||||    
T  8584073 atgtagtgtgacatgcccgtttgggatttactctgatgt-atgttta---attatttaattacttttgggtaacggggtgttaca 8584153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 311
Target Start/End: Original strand, 14012878 - 14012958
Alignment:
Q  227 atgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaattgattttgggtaaccgggtgttaca 311  Q
    |||||||||||||||||||||||||  |||||||| ||| |||||||   |||||| ||||  ||||||||||| ||||||||||    
T  14012878 atgtagtgtgacatgcccgtttgggatttactctgatgt-atgttta---attatttaattacttttgggtaacggggtgttaca 14012958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 311
Target Start/End: Complemental strand, 14089330 - 14089250
Alignment:
Q  227 atgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaattgattttgggtaaccgggtgttaca 311  Q
    |||||||||||||||||||||||||  |||||||| ||| |||||||   |||||| ||||  ||||||||||| ||||||||||    
T  14089330 atgtagtgtgacatgcccgtttgggatttactctgatgt-atgttta---attatttaattacttttgggtaacggggtgttaca 14089250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 311
Target Start/End: Complemental strand, 49398870 - 49398790
Alignment:
Q  227 atgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaattgattttgggtaaccgggtgttaca 311  Q
    |||||||||||||||||||||||||  |||||||| ||| |||||||   |||||| ||||  ||||||||||| ||||||||||    
T  49398870 atgtagtgtgacatgcccgtttgggatttactctgatgt-atgttta---attatttaattacttttgggtaacggggtgttaca 49398790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 179 - 250
Target Start/End: Original strand, 13037594 - 13037663
Alignment:
Q  179 ttgatgtttattaaatagtttttatattctatttaagaaa-attgatttatgtagtgtgacatgcccgtttgg 250  Q
    |||||||||||||||||| |||||||||||||||||||||  ||||   | ||||||||||||||||||||||    
T  13037594 ttgatgtttattaaatag-ttttatattctatttaagaaattttga--aaagtagtgtgacatgcccgtttgg 13037663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 179 - 250
Target Start/End: Original strand, 13043959 - 13044028
Alignment:
Q  179 ttgatgtttattaaatagtttttatattctatttaagaaa-attgatttatgtagtgtgacatgcccgtttgg 250  Q
    |||||||||||||||||| |||||||||||||||||||||  ||||   | ||||||||||||||||||||||    
T  13043959 ttgatgtttattaaatag-ttttatattctatttaagaaattttga--aaagtagtgtgacatgcccgtttgg 13044028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 181 - 221
Target Start/End: Complemental strand, 12201847 - 12201808
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaatt 221  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  12201847 gatgtttattaaatagtttt-atattctatttaagaaaatt 12201808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 201 - 261
Target Start/End: Complemental strand, 22163227 - 22163167
Alignment:
Q  201 tatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctg 261  Q
    |||||||||||||||||||||   | ||||||||||||||||||||| |||  ||||||||    
T  22163227 tatattctatttaagaaaatttgatgatgtagtgtgacatgcccgttggggttttactctg 22163167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 227 - 311
Target Start/End: Original strand, 13969580 - 13969660
Alignment:
Q  227 atgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaattgattttgggtaaccgggtgttaca 311  Q
    |||||||||||||||||||||||||  |||||||| ||| |||||||   |||||| ||||  ||||||||||| || |||||||    
T  13969580 atgtagtgtgacatgcccgtttgggatttactctgatgt-atgttta---attatttaattacttttgggtaacgggttgttaca 13969660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 227 - 311
Target Start/End: Original strand, 13975059 - 13975139
Alignment:
Q  227 atgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaattgattttgggtaaccgggtgttaca 311  Q
    |||||||||||||||||||||||||  |||||||| ||| |||||||   |||||| ||||  ||||||||||| || |||||||    
T  13975059 atgtagtgtgacatgcccgtttgggatttactctgatgt-atgttta---attatttaattacttttgggtaacgggttgttaca 13975139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 143 - 249
Target Start/End: Original strand, 15935632 - 15935738
Alignment:
Q  143 aatattccgctgcaaagttt-gatgaaactattttggtt-gatgtttattaaatagtttttatattctatttaagaaa-attgatttatgtagtgtgaca 239  Q
    ||||||||||||||| |||| | ||||||||||   ||| | |||||||||||||||||| |||||||||||||||||  ||||   | |||||||||||    
T  15935632 aatattccgctgcaaggttttggtgaaactattaaagtttgttgtttattaaatagtttt-atattctatttaagaaattttga--aaagtagtgtgaca 15935728  T
Q  240 tgcccgtttg 249  Q
    ||||||||||    
T  15935729 tgcccgtttg 15935738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 436 - 518
Target Start/End: Complemental strand, 20132198 - 20132116
Alignment:
Q  436 aaaatggccccaaaattatgagcaacccgtctaaaaatccacaaaattgtcttcaaatacttatcaaatgactcaaaaacata 518  Q
    |||||| ||||||||  |||| |||| | ||||||| | | | ||||| ||||||||||||||| ||||||||||| ||||||    
T  20132198 aaaatgtccccaaaaccatgaccaactcatctaaaactactctaaattttcttcaaatacttattaaatgactcaagaacata 20132116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 180 - 218
Target Start/End: Original strand, 24285122 - 24285159
Alignment:
Q  180 tgatgtttattaaatagtttttatattctatttaagaaa 218  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  24285122 tgatgtttattaaatag-ttttatattctatttaagaaa 24285159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 181 - 249
Target Start/End: Complemental strand, 49162666 - 49162597
Alignment:
Q  181 gatgtttattaaatag-tttttatattctatttaagaaa-attgatttatgtagtgtgacatgcccgtttg 249  Q
    |||||||| ||||||| ||||||||||||||||||||||  ||||| || |||||||||||||||| ||||    
T  49162666 gatgtttaataaatagatttttatattctatttaagaaattttgatata-gtagtgtgacatgcccatttg 49162597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 248
Target Start/End: Complemental strand, 29550371 - 29550303
Alignment:
Q  181 gatgtttattaaatag-tttttatattctatttaagaaaatt-gatttatgtagtgtgacatgcccgttt 248  Q
    |||||||| ||||||| |||||| ||||||||||||||| || ||| || ||||||||||||||||||||    
T  29550371 gatgtttaataaatagatttttacattctatttaagaaattttgatata-gtagtgtgacatgcccgttt 29550303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 181 - 217
Target Start/End: Complemental strand, 12273737 - 12273702
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaa 217  Q
    |||||||||||||||||||| ||||||||||||||||    
T  12273737 gatgtttattaaatagtttt-atattctatttaagaa 12273702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 201 - 261
Target Start/End: Original strand, 16830678 - 16830737
Alignment:
Q  201 tatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctg 261  Q
    |||||||||||||||||| ||||  | ||| ||||||||||||||||||||  ||||||||    
T  16830678 tatattctatttaagaaatttgaaat-tgtggtgtgacatgcccgtttgggttttactctg 16830737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 181 - 221
Target Start/End: Complemental strand, 17210555 - 17210516
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaatt 221  Q
    |||||| ||||||||||||| ||||||||||||||||||||    
T  17210555 gatgttcattaaatagtttt-atattctatttaagaaaatt 17210516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 261; Significance: 1e-145; HSPs: 3)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 19 - 311
Target Start/End: Original strand, 56958 - 57249
Alignment:
Q  19 tggaacttgatgttgtagccctatgtttgtttgaattatcggattatggttttactttggtgaggcttttataccaagactgttattagagaatcacaca 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  56958 tggaacttgatgttgtagccctatgtttgtttgaattatcggattatggttttactttggtgaggcttttataccaagactgttattggagaatcacaca 57057  T
Q  119 tttatgctgttgttattgatgatgaatattccgctgcaaagtttgatgaaactattttggttgatgtttattaaatagtttttatattctatttaagaaa 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  57058 tttatgctgttgttattgatgatgaatattccgctgcaaagtttgatgaaactgttttggttgatgtttattaaatagtttttatattctatttaagaaa 57157  T
Q  219 attgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaattgattttgggtaaccgggtgttaca 311  Q
    ||||||||||||| ||||||||||||||||||| ||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||    
T  57158 attgatttatgtactgtgacatgcccgtttgggaattactctgatg-catgtttatttattattaaattgattttgggtaacggggtgttaca 57249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 19 - 311
Target Start/End: Original strand, 47924 - 48215
Alignment:
Q  19 tggaacttgatgttgtagccctatgtttgtttgaattatcggattatggttttactttggtgaggcttttataccaagactgttattagagaatcacaca 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  47924 tggaacttgatgttgtagccctatgtttgtttgaattatcggattatggttttactttggtgaggcttttatgccaagactgttattggagaatcacaca 48023  T
Q  119 tttatgctgttgttattgatgatgaatattccgctgcaaagtttgatgaaactattttggttgatgtttattaaatagtttttatattctatttaagaaa 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  48024 tttatgctgttgttattgatgatgaatattccgctgcaaagtttgatgaaactgttttggttgatgtttattaaatagtttttatattctatttaagaaa 48123  T
Q  219 attgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaattgattttgggtaaccgggtgttaca 311  Q
    ||||||||||||| ||||||||||||||||||| ||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||    
T  48124 attgatttatgtactgtgacatgcccgtttgggaattactctgatg-catgtttatttattattaaattgattttgggtaacggggtgttaca 48215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #3
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 19 - 311
Target Start/End: Original strand, 63344 - 63635
Alignment:
Q  19 tggaacttgatgttgtagccctatgtttgtttgaattatcggattatggttttactttggtgaggcttttataccaagactgttattagagaatcacaca 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  63344 tggaacttgatgttgtagccctatgtttgtttgaattatcggattatggttttactttggtgaggcttttatgccaagactgttattggagaatcacaca 63443  T
Q  119 tttatgctgttgttattgatgatgaatattccgctgcaaagtttgatgaaactattttggttgatgtttattaaatagtttttatattctatttaagaaa 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  63444 tttatgctgttgttattgatgatgaatattccgctgcaaagtttgatgaaactgttttggttgatgtttattaaatagtttttatattctatttaagaaa 63543  T
Q  219 attgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaattgattttgggtaaccgggtgttaca 311  Q
    ||||||||||||| ||||||||||||||||||| ||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||    
T  63544 attgatttatgtactgtgacatgcccgtttgggaattactctgatg-catgtttatttattattaaattgattttgggtaacggggtgttaca 63635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 177; Significance: 4e-95; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 177; E-Value: 4e-95
Query Start/End: Original strand, 19 - 311
Target Start/End: Original strand, 15086552 - 15086841
Alignment:
Q  19 tggaacttgatgttgtagccctatgtttgtttgaattatcggattatggttttactttggtgaggcttttataccaagactgttattagagaatcacaca 118  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||| ||||||||||||    
T  15086552 tggaacttgatgttgtagccctatgtttgtttgaattattggattatggttttgctttggtgaggcttttatgccaagactgttattggagaatcacaca 15086651  T
Q  119 tttatgctgttgttattgatgatgaatattccgctgcaaagtttgatgaaactattttggttgatgtttattaaatagtttttatattctatttaagaaa 218  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||  |||||||||||||||||||||    
T  15086652 tttatgctgttgttattaatgatgaatattccgctgcaaagtttgatgaaactgtttaggttgatgtttattaaata-attttatattctatttaagaaa 15086750  T
Q  219 attgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaattgattttgggtaaccgggtgttaca 311  Q
     ||     ||||||||||||||||||| |||||| |||||||| |||  |||||| |||||||| ||||  ||| ||||||| ||||||||||    
T  15086751 ttttgaaaatgtagtgtgacatgcccg-ttggggtttactctgatgt-gtgtttaattattatttaattactttggggtaacggggtgttaca 15086841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 19 - 311
Target Start/End: Complemental strand, 32771030 - 32770739
Alignment:
Q  19 tggaacttgatgttgtagccctatgtttgtttgaattatcggattatggttttactttggtgaggcttttataccaagactgttattagagaatcacaca 118  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |||| || ||||||| |||||||||||||  ||||||||||||    
T  32771030 tggaacttgatgttgtagccctatgtttgtttgaactattggattatggttttactctggtaagacttttatgccaagactgttatcggagaatcacaca 32770931  T
Q  119 tttatgctgttgttattgatgatgaatattccgctgcaaagtttgatgaaactattttggttgatgtttattaaatagtttttatattctatttaagaa- 217  Q
    ||||||||||||||||| |||||||||||||| |||| ||||||||||||||| |||  ||| ||||||||||||||||||||||||||||||||||||     
T  32770930 tttatgctgttgttattaatgatgaatattccactgcgaagtttgatgaaactgtttaagttaatgtttattaaatagtttttatattctatttaagaat 32770831  T
Q  218 aattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaattgattttgggtaaccgggtgttaca 311  Q
      ||||   |||||||||||||||||||||||||  |||||||| |||  | |||| || ||||| ||||  ||||||||||| ||||||||||    
T  32770830 gcttga-aaatgtagtgtgacatgcccgtttgggatttactctgatgt-gtatttaattgttatttaattacttttgggtaacggggtgttaca 32770739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 181 - 312
Target Start/End: Complemental strand, 16185126 - 16184996
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttatta 280  Q
    |||||||||||||||| ||||||||||||||||||||| ||     ||||||||||||||||||||||||| ||||||||| || |||||||||||||||    
T  16185126 gatgtttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctgatg-catgtttatttatta 16185028  T
Q  281 ttaaattgattttgggtaaccgggtgttacac 312  Q
     | ||||||||||||| ||| |||||||||||    
T  16185027 attaattgattttgggaaacagggtgttacac 16184996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 181 - 311
Target Start/End: Original strand, 11395347 - 11395476
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttatta 280  Q
    |||| ||||||||||| ||||||||||||||||||||||||     ||||||||||||||||||||||||| ||||||||| || |||||||| ||||||    
T  11395347 gatgcttattaaatagattttatattctatttaagaaaatttgaaaatgtagtgtgacatgcccgtttgggaattactctgatg-catgtttaattatta 11395445  T
Q  281 ttaaattgattttgggtaaccgggtgttaca 311  Q
     | ||||||||||||| ||| ||||||||||    
T  11395446 attaattgattttgggaaacggggtgttaca 11395476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 181 - 311
Target Start/End: Original strand, 46349405 - 46349534
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttatta 280  Q
    |||||||||||||||||||||||||||||||||||||| ||     |||||||||||||||||||||||||  |||||||| ||| ||||||| ||||||    
T  46349405 gatgtttattaaatagtttttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggatttactctgatgt-atgtttaattatta 46349503  T
Q  281 ttaaattgattttgggtaaccgggtgttaca 311  Q
    || || || ||||||||||| ||||||||||    
T  46349504 tttaactgtttttgggtaacggggtgttaca 46349534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 188 - 312
Target Start/End: Original strand, 16188416 - 16188539
Alignment:
Q  188 attaaatagtttttatattctatttaagaaaatt-gatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaat 286  Q
    |||||||||||||||||||||||||||||||||| ||  || ||||||||||||| |||||||||  |||||||| ||| ||||||||||||||||||||    
T  16188416 attaaatagtttttatattctatttaagaaaatttgaaata-gtagtgtgacatgtccgtttgggatttactctgatgt-atgtttatttattattaaat 16188513  T
Q  287 tgattttgggtaaccgggtgttacac 312  Q
    || || |||||||| |||||||||||    
T  16188514 tgtttctgggtaacggggtgttacac 16188539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 188 - 311
Target Start/End: Original strand, 3290438 - 3290559
Alignment:
Q  188 attaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggat-tactctggtgtcatgtttatttattattaaat 286  Q
    ||||||||||||||||||||||||||||||| ||     |||||||||||||||||||||| ||||| ||||||| |||   |||||||||||||| |||    
T  3290438 attaaatagtttttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgttttgggatatactctgatgt---gtttatttattatttaat 3290534  T
Q  287 tgattttgggtaaccgggtgttaca 311  Q
    |||||||||||||| ||||||||||    
T  3290535 tgattttgggtaacggggtgttaca 3290559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 180 - 311
Target Start/End: Original strand, 14946468 - 14946600
Alignment:
Q  180 tgatgtttattaaatagtttttatattctatttaagaaa-attgatttatgtagtgtgacatgcccgtttggg-gattactctggtgtcatgtttattta 277  Q
    ||||||| ||||||||| ||||||||||||||| |||||  |||| ||| |||||||||||||||||||||||  ||||||||| || ||||||||||||    
T  14946468 tgatgttgattaaatagattttatattctatttgagaaattttgaatta-gtagtgtgacatgcccgtttgggaaattactctgatg-catgtttattta 14946565  T
Q  278 ttattaaattg-attttgggtaaccgggtgttaca 311  Q
    ||||||||||| |||||||||||| ||||||||||    
T  14946566 ttattaaattgtattttgggtaacggggtgttaca 14946600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 180 - 311
Target Start/End: Original strand, 15374061 - 15374193
Alignment:
Q  180 tgatgtttattaaatagtttttatattctatttaagaaa-attgatttatgtagtgtgacatgcccgtttggg-gattactctggtgtcatgtttattta 277  Q
    ||||||| ||||||||| ||||||||||||||| |||||  |||| ||| |||||||||||||||||||||||  ||||||||| || ||||||||||||    
T  15374061 tgatgttgattaaatagattttatattctatttgagaaattttgaatta-gtagtgtgacatgcccgtttgggaaattactctgatg-catgtttattta 15374158  T
Q  278 ttattaaattg-attttgggtaaccgggtgttaca 311  Q
    ||||||||||| |||||||||||| ||||||||||    
T  15374159 ttattaaattgtattttgggtaacggggtgttaca 15374193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 180 - 311
Target Start/End: Original strand, 21232682 - 21232812
Alignment:
Q  180 tgatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttatt 279  Q
    |||||| |||||||||| |||||||||||||||| |||| ||    |||||||||||||||||||||||||| ||||||||| || ||||||| ||||||    
T  21232682 tgatgtgtattaaatagattttatattctatttacgaaattttgaatatgtagtgtgacatgcccgtttgggaattactctgatg-catgtttgtttatt 21232780  T
Q  280 attaaattgattttgggtaaccgggtgttaca 311  Q
    | | | ||||||||||| ||| ||||||||||    
T  21232781 aattatttgattttgggaaacggggtgttaca 21232812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 60 - 311
Target Start/End: Original strand, 11882061 - 11882305
Alignment:
Q  60 gattatggttttactttggtgaggcttttataccaagactgtt-attagagaatcacacattt-atgctgttgttattgatgatgaatattccgctgcaa 157  Q
    |||||||  |||| |||| ||||| |||||| |||||| |||| | | |||||||| |||||| ||| ||||||| || ||||  |||||||||||||||    
T  11882061 gattatgtatttattttgatgaggtttttatgccaagattgtttagtggagaatcaaacatttgatgttgttgtttttaatgaa-aatattccgctgcaa 11882159  T
Q  158 agtttgatgaaactattttggttgatgtttattaaatagtttttatattctatttaagaaa-attgatttatgtagtgtgacatgcccgtttggggatta 256  Q
    |||||||||||||| |||  |||| |||||||| ||||| ||||||| |||||||||||||  ||||   | |||||||||||||||||||||||   ||    
T  11882160 agtttgatgaaactgtttaagttgttgtttatt-aatag-ttttataatctatttaagaaattttga--aaagtagtgtgacatgcccgtttgggatata 11882255  T
Q  257 ctctggtgtcatgtttatttattattaaattgattttgggtaaccgggtgttaca 311  Q
    |||||     |||||||||| ||||| ||||| ||| || |||| ||||||||||    
T  11882256 ctctg-----atgtttatttgttatttaattgttttgggataacggggtgttaca 11882305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 185 - 311
Target Start/End: Complemental strand, 38827212 - 38827091
Alignment:
Q  185 tttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaa 284  Q
    |||||||||||| ||||||||||||||||| ||| ||     ||||||||||||||||||||||||| ||||||||| || |||||||||| |||    |    
T  38827212 tttattaaatagattttatattctatttaacaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctgatg-catgtttattaatt----a 38827118  T
Q  285 attgattttgggtaaccgggtgttaca 311  Q
    |||||||||||| ||| ||||||||||    
T  38827117 attgattttgggaaacggggtgttaca 38827091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 181 - 261
Target Start/End: Original strand, 125251 - 125331
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctg 261  Q
    |||||||||||||||| ||||||||||||||||||||| ||     ||||||||||||||||||||||||| |||||||||    
T  125251 gatgtttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctg 125331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 185 - 311
Target Start/End: Complemental strand, 10305448 - 10305323
Alignment:
Q  185 tttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatg-tttatttattatta 283  Q
    |||||||||||| ||||||||||||||||||||| ||     ||||||||||||||||||||||||| ||||||||| |||  ||  ||| ||||||||     
T  10305448 tttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctgatgt--tgaattaattattattt 10305351  T
Q  284 aattgattttgggtaaccgggtgttaca 311  Q
    ||||  ||||||||||| ||||||||||    
T  10305350 aattacttttgggtaacggggtgttaca 10305323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 188 - 311
Target Start/End: Complemental strand, 6411343 - 6411220
Alignment:
Q  188 attaaatagtttttatattctatttaagaaaatt-gatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaat 286  Q
    ||||||||| ||||||||||||||||||||| || ||  | |||||||||||||||||||||    || |||||| ||| |||||||||||||||| |||    
T  6411343 attaaatagattttatattctatttaagaaattttgaaat-tgtagtgtgacatgcccgtttactaatcactctgatgt-atgtttatttattatttaat 6411246  T
Q  287 tga-ttttgggtaaccgggtgttaca 311  Q
    ||| ||||||||||| ||||||||||    
T  6411245 tgatttttgggtaacagggtgttaca 6411220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 185 - 311
Target Start/End: Original strand, 10308653 - 10308774
Alignment:
Q  185 tttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaa 284  Q
    ||||||| |||| ||||||||||||||||| ||| ||     ||||||||||||||||||||||||| ||||||||| || |||||||||| |||    |    
T  10308653 tttattagatagattttatattctatttaacaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctgatg-catgtttattaatt----a 10308747  T
Q  285 attgattttgggtaaccgggtgttaca 311  Q
    |||||||||||| ||| ||||||||||    
T  10308748 attgattttgggaaacggggtgttaca 10308774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 183 - 311
Target Start/End: Original strand, 18959160 - 18959287
Alignment:
Q  183 tgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattatt 282  Q
    |||||| ||||||||||||||||||||||||||||  ||||   |||||||||||||||||||||||||  |||||||| |||  |||||| ||||||||    
T  18959160 tgtttaataaatagtttttatattctatttaagaattttga-aaatgtagtgtgacatgcccgtttgggttttactctgatgt-gtgtttaattattatt 18959257  T
Q  283 aaatt-gattttgggtaaccgggtgttaca 311  Q
     ||||   |||| |||||| ||||||||||    
T  18959258 taattacttttttggtaacggggtgttaca 18959287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 184 - 261
Target Start/End: Original strand, 21744430 - 21744507
Alignment:
Q  184 gtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctg 261  Q
    ||||||||||||| ||||||||||||||||||||| ||     ||||||||||||||||||||||||| |||||||||    
T  21744430 gtttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctg 21744507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 185 - 261
Target Start/End: Original strand, 10306080 - 10306156
Alignment:
Q  185 tttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctg 261  Q
    |||||||||||| ||||||||||||||||||||| ||     ||||||||||||||||||||||||| |||||||||    
T  10306080 tttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctg 10306156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 188 - 311
Target Start/End: Original strand, 36306765 - 36306887
Alignment:
Q  188 attaaatag-tttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaat 286  Q
    ||||||||| |||||||||||||||||||||| || |  | |||||||||||||||||||||||| ||||||||| ||| |||||||| | ||| | |||    
T  36306765 attaaatagatttttatattctatttaagaaatttaaagt-tgtagtgtgacatgcccgtttgggaattactctgatgt-atgtttatgtgttaattaat 36306862  T
Q  287 tgattttgggtaaccgggtgttaca 311  Q
    ||||| | || ||| ||||||||||    
T  36306863 tgattattgggaacggggtgttaca 36306887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 184 - 261
Target Start/End: Complemental strand, 8775299 - 8775222
Alignment:
Q  184 gtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctg 261  Q
    ||||||||||||| ||||||||||||||||||||| ||     ||||||||||||||||||||||||  |||||||||    
T  8775299 gtttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttggtaattactctg 8775222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 180 - 261
Target Start/End: Complemental strand, 12546690 - 12546610
Alignment:
Q  180 tgatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctg 261  Q
    ||||||||||||||||||||| ||||||||||||||||||||     | |||||||||||||||||||||||  ||||||||    
T  12546690 tgatgtttattaaatagtttt-atattctatttaagaaaattttgaaaagtagtgtgacatgcccgtttgggatttactctg 12546610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 3327429 - 3327385
Alignment:
Q  22 aacttgatgttgtagccctatgtttgtttgaattatcggattatg 66  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  3327429 aacttgatgttgtagccctatgtttgtttgaattattggattatg 3327385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 179 - 218
Target Start/End: Complemental strand, 15141706 - 15141667
Alignment:
Q  179 ttgatgtttattaaatagtttttatattctatttaagaaa 218  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  15141706 ttgatgtttattaaatagtttttatattctatttaagaaa 15141667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 227 - 312
Target Start/End: Complemental strand, 4279361 - 4279280
Alignment:
Q  227 atgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaattgattttgggtaaccgggtgttacac 312  Q
    |||||||||||||||||||||||||  |||||||| ||| |||||||   |||||| ||||  ||||||||||| |||||||||||    
T  4279361 atgtagtgtgacatgcccgtttgggatttactctgatgt-atgttta---attatttaattacttttgggtaacggggtgttacac 4279280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 201 - 311
Target Start/End: Complemental strand, 15338343 - 15338236
Alignment:
Q  201 tatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaattgattttgggtaac 300  Q
    |||||||||||||||||| ||||  | |||||||||||||||||||| |||  |||||||| |||  ||   | |||||||| ||||||||||||| |||    
T  15338343 tatattctatttaagaaatttgaaat-tgtagtgtgacatgcccgttggggttttactctgatgt--tgaaaaattattatttaattgattttgggaaac 15338247  T
Q  301 cgggtgttaca 311  Q
     ||||||||||    
T  15338246 ggggtgttaca 15338236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 185 - 247
Target Start/End: Original strand, 16952963 - 16953025
Alignment:
Q  185 tttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtt 247  Q
    |||||||||||| ||||||||||||||||||||| ||     |||||||||||||||||||||    
T  16952963 tttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtt 16953025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 311
Target Start/End: Complemental strand, 19615693 - 19615613
Alignment:
Q  227 atgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaattgattttgggtaaccgggtgttaca 311  Q
    |||||||||||||||||||||||||  |||||||| ||| |||||||   |||||| ||||  ||||||||||| ||||||||||    
T  19615693 atgtagtgtgacatgcccgtttgggatttactctgatgt-atgttta---attatttaattacttttgggtaacggggtgttaca 19615613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 184 - 221
Target Start/End: Complemental strand, 4988386 - 4988349
Alignment:
Q  184 gtttattaaatagtttttatattctatttaagaaaatt 221  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  4988386 gtttattaaatagattttatattctatttaagaaaatt 4988349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 184 - 221
Target Start/End: Complemental strand, 4992484 - 4992447
Alignment:
Q  184 gtttattaaatagtttttatattctatttaagaaaatt 221  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  4992484 gtttattaaatagattttatattctatttaagaaaatt 4992447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 143 - 218
Target Start/End: Complemental strand, 19145102 - 19145027
Alignment:
Q  143 aatattccgctgcaaagttt-gatgaaactattttggttgatgtttattaaatagtttttatattctatttaagaaa 218  Q
    ||||||||||||||| |||| | |||||||| |   |||||||||||||||||||| ||| ||||||||||||||||    
T  19145102 aatattccgctgcaaggttttggtgaaactaataaagttgatgtttattaaatagtattt-tattctatttaagaaa 19145027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 143 - 218
Target Start/End: Complemental strand, 20744501 - 20744426
Alignment:
Q  143 aatattccgctgcaaagttt-gatgaaactattttggttgatgtttattaaatagtttttatattctatttaagaaa 218  Q
    ||||||||||||||| |||| | |||||||| |   |||||||||||||||||||| ||| ||||||||||||||||    
T  20744501 aatattccgctgcaaggttttggtgaaactaataaagttgatgtttattaaatagtattt-tattctatttaagaaa 20744426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 143 - 217
Target Start/End: Original strand, 14256429 - 14256503
Alignment:
Q  143 aatattccgctgcaaagttt-gatgaaactattttggttgatgtttattaaatagtttttatattctatttaagaa 217  Q
    ||||||||||||||| |||| | |||||||| |   |||||||||||||||||||| ||| |||||||||||||||    
T  14256429 aatattccgctgcaaggttttggtgaaactaataaagttgatgtttattaaatagtattt-tattctatttaagaa 14256503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 143 - 217
Target Start/End: Original strand, 14266638 - 14266712
Alignment:
Q  143 aatattccgctgcaaagttt-gatgaaactattttggttgatgtttattaaatagtttttatattctatttaagaa 217  Q
    ||||||||||||||| |||| | |||||||| |   |||||||||||||||||||| ||| |||||||||||||||    
T  14266638 aatattccgctgcaaggttttggtgaaactaataaagttgatgtttattaaatagtattt-tattctatttaagaa 14266712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 179 - 218
Target Start/End: Original strand, 16476766 - 16476804
Alignment:
Q  179 ttgatgtttattaaatagtttttatattctatttaagaaa 218  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  16476766 ttgatgtttattaaatag-ttttatattctatttaagaaa 16476804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 180 - 218
Target Start/End: Complemental strand, 12694111 - 12694074
Alignment:
Q  180 tgatgtttattaaatagtttttatattctatttaagaaa 218  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  12694111 tgatgtttattaaatagtttt-atattctatttaagaaa 12694074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 180 - 218
Target Start/End: Original strand, 16576138 - 16576175
Alignment:
Q  180 tgatgtttattaaatagtttttatattctatttaagaaa 218  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  16576138 tgatgtttattaaatag-ttttatattctatttaagaaa 16576175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 180 - 218
Target Start/End: Complemental strand, 16589524 - 16589487
Alignment:
Q  180 tgatgtttattaaatagtttttatattctatttaagaaa 218  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  16589524 tgatgtttattaaatagtttt-atattctatttaagaaa 16589487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 181 - 247
Target Start/End: Original strand, 16946359 - 16946425
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtt 247  Q
    |||||||| ||||||| ||||||||||||||||||||| ||     ||||||||| |||||||||||    
T  16946359 gatgtttactaaatagattttatattctatttaagaaattttgaaaatgtagtgtaacatgcccgtt 16946425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 181 - 247
Target Start/End: Original strand, 37245035 - 37245100
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtt 247  Q
    |||||||| ||||||||||||||||||||||| ||||| ||     |||||||||||||||||||||    
T  37245035 gatgtttaataaatagtttttatattctattt-agaaattttgaaaatgtagtgtgacatgcccgtt 37245100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 218
Target Start/End: Original strand, 14583316 - 14583352
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaa 218  Q
    |||||||||||||||||||| |||||||||||||||||    
T  14583316 gatgtttattaaatagtttt-atattctatttaagaaa 14583352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 218
Target Start/End: Original strand, 16928631 - 16928667
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaa 218  Q
    |||||||||||||||||||| |||||||||||||||||    
T  16928631 gatgtttattaaatagtttt-atattctatttaagaaa 16928667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 218
Target Start/End: Original strand, 16929722 - 16929758
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaa 218  Q
    |||||||||||||||||||| |||||||||||||||||    
T  16929722 gatgtttattaaatagtttt-atattctatttaagaaa 16929758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 182 - 218
Target Start/End: Complemental strand, 13677794 - 13677759
Alignment:
Q  182 atgtttattaaatagtttttatattctatttaagaaa 218  Q
    ||||||||||||||||||| |||||||||||||||||    
T  13677794 atgtttattaaatagtttt-atattctatttaagaaa 13677759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 181 - 221
Target Start/End: Original strand, 14282265 - 14282305
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaatt 221  Q
    |||||||| |||||||  |||||||||||||||||||||||    
T  14282265 gatgtttactaaatagactttatattctatttaagaaaatt 14282305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 181 - 221
Target Start/End: Original strand, 14300373 - 14300413
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaatt 221  Q
    |||||||| |||||||  |||||||||||||||||||||||    
T  14300373 gatgtttactaaatagactttatattctatttaagaaaatt 14300413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 178 - 218
Target Start/End: Original strand, 16074626 - 16074665
Alignment:
Q  178 gttgatgtttattaaatagtttttatattctatttaagaaa 218  Q
    |||| |||||||||||||||||| |||||||||||||||||    
T  16074626 gttgttgtttattaaatagtttt-atattctatttaagaaa 16074665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 181 - 250
Target Start/End: Original strand, 16928295 - 16928365
Alignment:
Q  181 gatgtttattaaatag--tttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttgg 250  Q
    |||||||| |||||||  |||||||||||||||| ||||| ||||   |||||||||||||||||| |||||    
T  16928295 gatgtttaataaatagattttttatattctatttcagaaatttgaaa-atgtagtgtgacatgcccatttgg 16928365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 143 - 218
Target Start/End: Complemental strand, 19151400 - 19151325
Alignment:
Q  143 aatattccgctgcaaagttt-gatgaaactattttggttgatgtttattaaatagtttttatattctatttaagaaa 218  Q
    |||||||||||||||||||| |  ||||||| |   |||||||||||||||||| | ||| ||||||||||||||||    
T  19151400 aatattccgctgcaaagttttggcgaaactaataaagttgatgtttattaaataatattt-tattctatttaagaaa 19151325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 143 - 218
Target Start/End: Complemental strand, 20750799 - 20750724
Alignment:
Q  143 aatattccgctgcaaagttt-gatgaaactattttggttgatgtttattaaatagtttttatattctatttaagaaa 218  Q
    |||||||||||||||||||| |  ||||||| |   |||||||||||||||||| | ||| ||||||||||||||||    
T  20750799 aatattccgctgcaaagttttggcgaaactaataaagttgatgtttattaaataatattt-tattctatttaagaaa 20750724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 171; Significance: 1e-91; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 19 - 311
Target Start/End: Complemental strand, 13451760 - 13451468
Alignment:
Q  19 tggaacttgatgttgtagccctatgtttgtttgaattatcggattatggttttactttggtgaggcttttataccaagactgttattagagaatcacaca 118  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||    
T  13451760 tggaacttgatgttgtagccctatgtttgtttgaattattggattatggttttactttggtgagacttttatgccaagactgttattggagaatcacaca 13451661  T
Q  119 tttatgctgttgttattgatgatgaatattccgctgcaaagtttgatgaaactattttggttgatgtttattaaatagtttttatattctatttaagaa- 217  Q
    ||| ||||||||||||| ||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||     
T  13451660 tttgtgctgttgttattaatgatgaatattccgctgcaaagtttgatgaaactgtttaagttgatgtttattaaatagtttttatattctatttaagaat 13451561  T
Q  218 aattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaatt-gattttgggtaaccgggtgttaca 311  Q
      ||||   |||||||||||||||||||||||||  |||||||| |||  || ||| |||||||| ||||   ||||||||||| ||||||||||    
T  13451560 gcttga-aaatgtagtgtgacatgcccgtttgggatttactctgatgt-gtgcttaattattatttaattactttttgggtaacagggtgttaca 13451468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 181 - 316
Target Start/End: Complemental strand, 14062443 - 14062308
Alignment:
Q  181 gatgtttattaaatag-tttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttatt 279  Q
    |||||||||||||||| |||||||||||||||||||||| ||     ||||||||||||||| ||||||||| | ||||||| || ||||||||||||||    
T  14062443 gatgtttattaaatagatttttatattctatttaagaaattttgaaaatgtagtgtgacatgtccgtttgggaactactctgatg-catgtttatttatt 14062345  T
Q  280 attaaattgattttgggtaaccgggtgttacacacag 316  Q
    ||||||||||||||||||||| |||||||||| ||||    
T  14062344 attaaattgattttgggtaacggggtgttacatacag 14062308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 181 - 311
Target Start/End: Complemental strand, 16220761 - 16220632
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttatta 280  Q
    |||||||||||||||| ||||||||||||||||||||| ||     ||||||||||| |||| ||||| || ||||||||| || |||||||||||||||    
T  16220761 gatgtttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgatatgctcgttttggaattactctgatg-catgtttatttatta 16220663  T
Q  281 ttaaattgattttgggtaaccgggtgttaca 311  Q
    |||||||||||||||||||| ||||||||||    
T  16220662 ttaaattgattttgggtaacggggtgttaca 16220632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 60 - 313
Target Start/End: Original strand, 53905854 - 53906101
Alignment:
Q  60 gattatggttttactttggtgaggcttttataccaagactgtt-attagagaatcacacattt-atgctgttgttattgatgatgaatattccgctgcaa 157  Q
    |||||||| |||| |||| |||||||||||| ||||||||||| | | |||||||| |||||| ||| ||||||| || ||||  |||||||||||||||    
T  53905854 gattatggatttattttgatgaggcttttatgccaagactgtttagtggagaatcaaacatttgatgttgttgtttttaatgaa-aatattccgctgcaa 53905952  T
Q  158 agtttgatgaaactattttggttgatgtttattaaatagtttttatattctatttaagaaaat-tgatttatgtagtgtgacatgcccgtttggggatta 256  Q
    ||||||| |||||| |||  |||| |||||||||||||| ||||||| ||||||||||||| | |||   | |||||||||||||||||||||||   ||    
T  53905953 agtttgaagaaactgtttaagttgttgtttattaaatag-ttttataatctatttaagaaattatga--aaagtagtgtgacatgcccgtttgggatata 53906049  T
Q  257 ctctggtgtcatgtttatttattattaaattgattttgggtaaccgggtgttacaca 313  Q
    |||||     |||||||||| ||||| ||||| ||| || |||| ||||||||||||    
T  53906050 ctctg-----atgtttatttgttatttaattgttttgggataacggggtgttacaca 53906101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 181 - 300
Target Start/End: Original strand, 41529727 - 41529845
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttatta 280  Q
    |||||||||||||||| ||||||||||||||||||||| ||     |||||||||||||||| |||||||| ||||||||| || |||||||||||||||    
T  41529727 gatgtttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgctcgtttgggaattactctgatg-catgtttatttatta 41529825  T
Q  281 ttaaattgattttgggtaac 300  Q
    ||||||||||||||| ||||    
T  41529826 ttaaattgattttggataac 41529845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 181 - 309
Target Start/End: Original strand, 42598389 - 42598516
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttatta 280  Q
    |||| ||||||||||| ||||||||||||||||||||||||     ||||||||||| ||||||||||||| ||||||||| || |||||||||||||||    
T  42598389 gatgcttattaaatagattttatattctatttaagaaaatttgaaaatgtagtgtgatatgcccgtttgggaattactctgatg-catgtttatttatta 42598487  T
Q  281 ttaaattgattttgggtaaccgggtgtta 309  Q
     | ||||||||||||| ||| ||||||||    
T  42598488 attaattgattttgggaaacggggtgtta 42598516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 181 - 312
Target Start/End: Original strand, 37839660 - 37839790
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttatta 280  Q
    |||| ||||||||||| ||||||||||||||| ||||||||     ||||||||||||||| ||||||||  ||||||||| || |||||||||||||||    
T  37839660 gatgcttattaaatagattttatattctatttgagaaaatttgaaaatgtagtgtgacatgtccgtttggaaattactctgatg-catgtttatttatta 37839758  T
Q  281 ttaaattgattttgggtaaccgggtgttacac 312  Q
     | ||||||||||||| ||| |||||||||||    
T  37839759 attaattgattttgggaaacggggtgttacac 37839790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 188 - 311
Target Start/End: Original strand, 2585825 - 2585947
Alignment:
Q  188 attaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggat-tactctggtgtcatgtttatttattattaaat 286  Q
    ||||||||||||||||||||||||||||||| ||     |||||||||||||||||||||| ||||| ||||||| ||   ||||||||||||||| |||    
T  2585825 attaaatagtttttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgttttgggatatactctgatg---tgtttatttattatttaat 2585921  T
Q  287 tga-ttttgggtaaccgggtgttaca 311  Q
    ||| ||||| ||||| ||||||||||    
T  2585922 tgatttttgagtaacggggtgttaca 2585947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 172 - 311
Target Start/End: Complemental strand, 40908130 - 40907991
Alignment:
Q  172 attttggttgatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttgg-ggattactctggtgtcatgt 270  Q
    |||||| | |||||||||||||||| ||| ||||||||||||||||| || |   ||||||||||||||||||||||||   | ||||||| || |||||    
T  40908130 attttgatggatgtttattaaatagatttcatattctatttaagaaattttaaaaatgtagtgtgacatgcccgtttggtttaatactctgatg-catgt 40908032  T
Q  271 ttatttattattaaattgattttgggtaaccgggtgttaca 311  Q
    |||||||||| | |||||||| | || ||| ||||||||||    
T  40908031 ttatttattaattaattgattattggaaacggggtgttaca 40907991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 181 - 261
Target Start/End: Original strand, 55503807 - 55503887
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctg 261  Q
    |||||||||||||||| ||||||||||||||||||||| ||     ||||||||||||||||||||||||| |||||||||    
T  55503807 gatgtttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctg 55503887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 181 - 311
Target Start/End: Complemental strand, 14479989 - 14479864
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttatta 280  Q
    |||||||||||||||| ||||||||||||||||||||| ||     |||||||||||||||||||||||||  ||||||||     || | || |||| |    
T  14479989 gatgtttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggatttactctg-----atttataattatca 14479895  T
Q  281 ttaaattgattttgggtaaccgggtgttaca 311  Q
    || ||||||||||||| ||| ||||||||||    
T  14479894 tttaattgattttgggcaacggggtgttaca 14479864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 184 - 261
Target Start/End: Complemental strand, 4170001 - 4169924
Alignment:
Q  184 gtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctg 261  Q
    ||||||||||||| ||||||||||||||||||||| ||     ||||||||||||||||||||||||| |||||||||    
T  4170001 gtttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggtattactctg 4169924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 184 - 261
Target Start/End: Original strand, 31132421 - 31132498
Alignment:
Q  184 gtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctg 261  Q
    ||||||||||||| ||||||||||||||||||||| ||     ||||||||||||||||||||||||| |||||||||    
T  31132421 gtttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctg 31132498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 184 - 261
Target Start/End: Complemental strand, 14697724 - 14697647
Alignment:
Q  184 gtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctg 261  Q
    ||||||||||| | ||||||||||||||||||||| ||     ||||||||||||||||||||||||| |||||||||    
T  14697724 gtttattaaattgattttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctg 14697647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 185 - 311
Target Start/End: Original strand, 18170371 - 18170494
Alignment:
Q  185 tttattaaatagtttttatattctatttaagaaaatt-gatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattatta 283  Q
    |||||||||||||||| ||||||||||||||||| || ||   | ||||||||||||| |||||||||   ||||||| ||| ||||||||||||||||     
T  18170371 tttattaaatagtttt-atattctatttaagaaattttgaa--aagtagtgtgacatgtccgtttgggatatactctgatgt-atgtttatttattattt 18170466  T
Q  284 aattgattttgggtaaccgggtgttaca 311  Q
    ||||| ||| || |||| ||||||||||    
T  18170467 aattgctttgggataacagggtgttaca 18170494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 188 - 311
Target Start/End: Complemental strand, 10687570 - 10687445
Alignment:
Q  188 attaaatag-tttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgt---ttatttattatta 283  Q
    ||||||||| |||||||||||||||| ||||| ||||  || |||||||||||||||||||||||   ||||||| ||  ||||   |||||||||||||    
T  10687570 attaaatagatttttatattctatttgagaaatttgaaata-gtagtgtgacatgcccgtttgggttatactctgatg--atgtatgttatttattatta 10687474  T
Q  284 aattg-attttgggtaaccgggtgttaca 311  Q
    || || |||||||||||| ||||||||||    
T  10687473 aactgtattttgggtaacggggtgttaca 10687445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 188 - 311
Target Start/End: Complemental strand, 10901210 - 10901085
Alignment:
Q  188 attaaatag-tttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgt---ttatttattatta 283  Q
    ||||||||| |||||||||||||||| ||||| ||||  || |||||||||||||||||||||||   ||||||| ||  ||||   |||||||||||||    
T  10901210 attaaatagatttttatattctatttgagaaatttgaaata-gtagtgtgacatgcccgtttgggttatactctgatg--atgtatgttatttattatta 10901114  T
Q  284 aattg-attttgggtaaccgggtgttaca 311  Q
    || || |||||||||||| ||||||||||    
T  10901113 aactgtattttgggtaacggggtgttaca 10901085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 178 - 217
Target Start/End: Original strand, 10977633 - 10977672
Alignment:
Q  178 gttgatgtttattaaatagtttttatattctatttaagaa 217  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  10977633 gttgatgtttattaaatagtttttatattctatttaagaa 10977672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 270 - 311
Target Start/End: Original strand, 15154085 - 15154126
Alignment:
Q  270 tttatttattattaaattgattttgggtaaccgggtgttaca 311  Q
    ||||||||||||||||||||||||||||||| ||||||||||    
T  15154085 tttatttattattaaattgattttgggtaacggggtgttaca 15154126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 181 - 311
Target Start/End: Original strand, 13900282 - 13900408
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccg-tttggggat-tactctggtgtcatgtttatttat 278  Q
    |||||| ||||||||||||| ||||||||||||||||||||     | ||||||||||||||||| ||||| ||| |||||||     ||| ||||||||    
T  13900282 gatgttcattaaatagtttt-atattctatttaagaaaatttggaaaagtagtgtgacatgcccgttttggtgatatactctg-----atgattatttat 13900375  T
Q  279 tattaaattgattttgggtaaccgggtgttaca 311  Q
    |||| ||||| |||||| |||| ||||||||||    
T  13900376 tatttaattgcttttggataacggggtgttaca 13900408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 311
Target Start/End: Complemental strand, 15324346 - 15324264
Alignment:
Q  227 atgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaattgattttgggtaaccgggtgttaca 311  Q
    |||| ||||||||||||||||| | || ||||||| ||| ||| |||||||||||| ||||| ||||||||||| ||||||||||    
T  15324346 atgtcgtgtgacatgcccgttttgagaatactctgatgt-atgattatttattatttaattg-ttttgggtaacggggtgttaca 15324264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 201 - 311
Target Start/End: Complemental strand, 16151985 - 16151876
Alignment:
Q  201 tatattctatttaagaaaatt-gatttatgtagtgtgacatgcccgtttgggg-attactctggtgtcatgtttatttattattaaattgattttgggta 298  Q
    |||||| ||||||||||| || || ||| ||||||||||||||| |||||||  ||||||||| || ||||||||||||||| | ||||||||||||| |    
T  16151985 tatattatatttaagaaattttgaatta-gtagtgtgacatgcctgtttgggtcattactctgatg-catgtttatttattaattaattgattttggg-a 16151889  T
Q  299 accgggtgttaca 311  Q
    || ||||||||||    
T  16151888 acggggtgttaca 16151876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 201 - 311
Target Start/End: Complemental strand, 16156131 - 16156022
Alignment:
Q  201 tatattctatttaagaaaatt-gatttatgtagtgtgacatgcccgtttgggg-attactctggtgtcatgtttatttattattaaattgattttgggta 298  Q
    |||||| ||||||||||| || || ||| ||||||||||||||| |||||||  ||||||||| || ||||||||||||||| | ||||||||||||| |    
T  16156131 tatattatatttaagaaattttgaatta-gtagtgtgacatgcctgtttgggtcattactctgatg-catgtttatttattaattaattgattttggg-a 16156035  T
Q  299 accgggtgttaca 311  Q
    || ||||||||||    
T  16156034 acggggtgttaca 16156022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 198 - 311
Target Start/End: Original strand, 38982701 - 38982811
Alignment:
Q  198 ttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaattga-ttttggg 296  Q
    ||||||||||||||||||||| ||     ||||||||||||||||||||||||| ||||||||| || |||||   ||||||| | |||||| |||||||    
T  38982701 ttttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctgatg-catgt---tttattaattaattgatttttggg 38982796  T
Q  297 taaccgggtgttaca 311  Q
     ||| ||||||||||    
T  38982797 aaacggggtgttaca 38982811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 181 - 311
Target Start/End: Original strand, 16229779 - 16229909
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattg---atttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttattta 277  Q
    |||||||||||||||||||| ||| ||||||||||||| ||    | ||| ||||| |||||||||||||||||   ||||||| ||| || ||||||||    
T  16229779 gatgtttattaaatagtttt-ataatctatttaagaaattttgaaaatta-gtagtatgacatgcccgtttgggatatactctgatgt-atttttattta 16229875  T
Q  278 ttattaaattgattttgggtaaccgggtgttaca 311  Q
    ||||| ||||| ||| || |||| ||||||||||    
T  16229876 ttatttaattgctttgggataacggggtgttaca 16229909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 30873320 - 30873255
Alignment:
Q  184 gtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggg 251  Q
    ||||||||||||||||| |||||||||||||||||||| |   | |||||||||||||||||||||||    
T  30873320 gtttattaaatagtttt-atattctatttaagaaaattta-aaaagtagtgtgacatgcccgtttggg 30873255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 143 - 251
Target Start/End: Complemental strand, 18270805 - 18270697
Alignment:
Q  143 aatattccgctgcaaagttt-gatgaaactattttggtt-gatgtttattaaatagtttttatattctatttaagaaa-attgatttatgtagtgtgaca 239  Q
    ||||||||||||||| |||| | ||||||||||   ||| | |||||||||||||||||| |||||||||||||||||  ||||   | |||||||||||    
T  18270805 aatattccgctgcaaggttttgttgaaactattaaagtttgttgtttattaaatagtttt-atattctatttaagaaattttga--aaagtagtgtgaca 18270709  T
Q  240 tgcccgtttggg 251  Q
    ||||||||||||    
T  18270708 tgcccgtttggg 18270697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 11846575 - 11846508
Alignment:
Q  184 gtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggg 251  Q
    |||||||||||||||||  | |||||||||||||||||     ||| |||||||||||||||||||||    
T  11846575 gtttattaaatagttttatttttctatttaagaaaatttgaaaatgaagtgtgacatgcccgtttggg 11846508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 250
Target Start/End: Complemental strand, 14485032 - 14484965
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaa-attgatttatgtagtgtgacatgcccgtttgg 250  Q
    |||||||||||||||||||| |||||||||||||||||  ||||   ||||||||||||||||| ||||||    
T  14485032 gatgtttattaaatagtttt-atattctatttaagaaattttga--aatgtagtgtgacatgcctgtttgg 14484965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 315
Target Start/End: Complemental strand, 15406429 - 15406296
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaatt-gatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttatt 279  Q
    ||||| |||||||||| ||||||||| ||||||  ||| || || ||| | |||||||||||||| || ||  | ||||||| || ||||||||||||||    
T  15406429 gatgtgtattaaatagattttatattatatttacaaaattttgaatta-gaagtgtgacatgcccattgggttaatactctgatg-catgtttatttatt 15406332  T
Q  280 attaaattgattttgggtaaccgggtgttacacaca 315  Q
    | | |||||||| | || ||| ||||||||||||||    
T  15406331 aattaattgattattgggaacggggtgttacacaca 15406296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 143 - 250
Target Start/End: Complemental strand, 16484156 - 16484049
Alignment:
Q  143 aatattccgctgcaaagttt-gatgaaactattttggttgatgtttattaaatagtttttatattctatttaagaaa-attgatttatgtagtgtgacat 240  Q
    ||||||||||||||| |||| | |||||||| |    ||| ||||||||| |||| |||||||||||||||||||||  ||||   | ||||||||||||    
T  16484156 aatattccgctgcaaggttttggtgaaactaataaaattgttgtttattagatagattttatattctatttaagaaattttga--aaagtagtgtgacat 16484059  T
Q  241 gcccgtttgg 250  Q
    ||||||||||    
T  16484058 gcccgtttgg 16484049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 185 - 250
Target Start/End: Original strand, 41940000 - 41940065
Alignment:
Q  185 tttattaaatagtttttatattctatttaagaaa-attgatttatgtagtgtgacatgcccgtttgg 250  Q
    |||||||||||| |||||||||||||||||||||  ||||   |||||||||||||||||| |||||    
T  41940000 tttattaaatagattttatattctatttaagaaatcttga-aaatgtagtgtgacatgcccatttgg 41940065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 441
Target Start/End: Original strand, 24042365 - 24042434
Alignment:
Q  372 acacctatgaagttgtctggttagggacgaaataaaattacaacaactcaaatcaaaacactataaaatg 441  Q
    ||||||||||| |||||| |||| | | ||||| |||||||||  ||||||||||||||| || ||||||    
T  24042365 acacctatgaaattgtctagttatgaaagaaatgaaattacaatgactcaaatcaaaacaatacaaaatg 24042434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 261
Target Start/End: Complemental strand, 27904751 - 27904675
Alignment:
Q  188 attaaatag-tttttatatt--ctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctg 261  Q
    ||||||||| ||||||||||  |||||||||||| ||   | |||||||||||||||||||||||||  ||||||||    
T  27904751 attaaatagatttttatattttctatttaagaaattttgataatgtagtgtgacatgcccgtttgggttttactctg 27904675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 218
Target Start/End: Complemental strand, 30237256 - 30237220
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaa 218  Q
    |||||||||||||||||||| |||||||||||||||||    
T  30237256 gatgtttattaaatagtttt-atattctatttaagaaa 30237220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 181 - 221
Target Start/End: Original strand, 13045782 - 13045821
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaatt 221  Q
    |||||| ||||||||||||| ||||||||||||||||||||    
T  13045782 gatgttcattaaatagtttt-atattctatttaagaaaatt 13045821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 143 - 218
Target Start/End: Complemental strand, 14820883 - 14820808
Alignment:
Q  143 aatattccgctgcaaagttt-gatgaaactattttggttgatgtttattaaatagtttttatattctatttaagaaa 218  Q
    ||||||||||||||| |||| | |||||||| |   |||| ||||||||||||||| || |||||||||||||||||    
T  14820883 aatattccgctgcaaggttttggtgaaactaataaagttggtgtttattaaatagtatt-atattctatttaagaaa 14820808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 230 - 311
Target Start/End: Complemental strand, 16230431 - 16230353
Alignment:
Q  230 tagtgtgacatgcccgtttggggat-tactctggtgtcatgtttatttattattaaattgattttgggtaaccgggtgttaca 311  Q
    ||||||||||||||||||| ||||| ||||||| ||   ||||||||||||||| ||||| ||| || |||| ||||||||||    
T  16230431 tagtgtgacatgcccgttttgggatatactctgatg---tgtttatttattatttaattg-tttgggataactgggtgttaca 16230353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 155; Significance: 5e-82; HSPs: 3)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 19 - 311
Target Start/End: Complemental strand, 25596 - 25308
Alignment:
Q  19 tggaacttgatgttgtagccctatgtttgtttgaattatcggattatggttttactttggtgaggcttttataccaagactgttattagagaatcacaca 118  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||| |||||||||| ||  ||||||||||||    
T  25596 tggaacttgatgttgtagccctatgtttgtttgaactattggattatggttttactctggtgaggcttttatgccaagactgt-atcggagaatcacaca 25498  T
Q  119 tttatgctgttgttattgatgatgaatattccgctgcaaagtttgatgaaactattttggttgatgtttattaaatagtttttatattctatttaagaaa 218  Q
    |||||||| |||||||| ||||||||||||| ||||| ||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||     
T  25497 tttatgctattgttattaatgatgaatattctgctgcgaagtttgatgaaactgtttaagttgatgtttattaaatagtttttatattctatttaagaat 25398  T
Q  219 attgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaattgattttgggtaaccgggtgttaca 311  Q
      | |   |||||||||||||||||||||| ||  |||||||| ||   |||||| |||||||| ||||  ||||||||||| ||||||||||    
T  25397 gcttaaaaatgtagtgtgacatgcccgtttaggatttactctgatg---tgtttaattattatttaattacttttgggtaacggggtgttaca 25308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 181 - 247
Target Start/End: Original strand, 19967 - 20033
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaa--ttgatttatgtagtgtgacatgcccgtt 247  Q
    |||||||||||||||||||| ||||||||||||||||||  ||||  |||||||||||||||| |||||    
T  19967 gatgtttattaaatagtttt-atattctatttaagaaaaatttga-atatgtagtgtgacatgtccgtt 20033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 181 - 247
Target Start/End: Original strand, 22787 - 22853
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaa--ttgatttatgtagtgtgacatgcccgtt 247  Q
    |||||||||||||||||||| ||||||||||||||||||  ||||  |||||||||||||||| |||||    
T  22787 gatgtttattaaatagtttt-atattctatttaagaaaaatttga-atatgtagtgtgacatgtccgtt 22853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 83; Significance: 5e-39; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 181 - 311
Target Start/End: Original strand, 21322902 - 21323031
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttatta 280  Q
    |||||||||||||||| ||||||||||||||||||||| ||     ||||||||||||||||||||||||| ||||||||| || |||||||||||||||    
T  21322902 gatgtttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctgatg-catgtttatttatta 21323000  T
Q  281 ttaaattgattttgggtaaccgggtgttaca 311  Q
    |||||||||||||||||||| ||||||||||    
T  21323001 ttaaattgattttgggtaacggggtgttaca 21323031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 181 - 311
Target Start/End: Original strand, 21327490 - 21327619
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttatta 280  Q
    |||||||||||||||| ||||||||||||||||||||| ||     ||||||||||||||||||||||||| ||||||| | || |||||||||||||||    
T  21327490 gatgtttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggaattactcagatg-catgtttatttatta 21327588  T
Q  281 ttaaattgattttgggtaaccgggtgttaca 311  Q
    ||||||| |||||||||||| ||||||||||    
T  21327589 ttaaattaattttgggtaacggggtgttaca 21327619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 181 - 309
Target Start/End: Complemental strand, 44430906 - 44430780
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttatta 280  Q
    |||||||||||||||| ||||||||||||||||||||| ||     ||||||||||||||||| ||||||| ||||||||| || ||||||||||| |||    
T  44430906 gatgtttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgcc-gtttgggaattactctgatg-catgtttatttttta 44430809  T
Q  281 ttaaattgattttgggtaaccgggtgtta 309  Q
    |||||||||||||||| ||| ||||||||    
T  44430808 ttaaattgattttgggaaacggggtgtta 44430780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 180 - 311
Target Start/End: Original strand, 8415581 - 8415711
Alignment:
Q  180 tgatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttatt 279  Q
    ||||||||||||||||| ||||||||||||||||||||  ||     |||||||||||||| |||||||| | ||||||||| |  ||||||||||||||    
T  8415581 tgatgtttattaaatagattttatattctatttaagaattttttaaaatgtagtgtgacatacccgtttgagaattactctgata-catgtttatttatt 8415679  T
Q  280 attaaattgattttgggtaaccgggtgttaca 311  Q
    ||||||||||||||||  ||| ||||||||||    
T  8415680 attaaattgattttggaaaacggggtgttaca 8415711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 49 - 162
Target Start/End: Original strand, 20983999 - 20984112
Alignment:
Q  49 ttgaattatcggattatggttttactttggtgaggctttt-ataccaagactgttattagagaatcacacatttatgctgttgttattgatgatgaatat 147  Q
    |||||||||  ||||||||||| ||||||||||||||||| || |||||||| ||| | |||||||||||   ||||||||||||||| |||||||||||    
T  20983999 ttgaattatttgattatggttt-actttggtgaggctttttatgccaagactattagtggagaatcacacgactatgctgttgttattaatgatgaatat 20984097  T
Q  148 tccgctgcaaagttt 162  Q
    |||||||||||||||    
T  20984098 tccgctgcaaagttt 20984112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 181 - 311
Target Start/End: Original strand, 22176544 - 22176673
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgt-ttatttatt 279  Q
    |||||| ||||||||| ||||||||||||||||||||| ||     |||||||||||||||||||||||||  |||||||  |||  ||  |||||||||    
T  22176544 gatgttcattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggatttactctaatgt--tgaattatttatt 22176641  T
Q  280 attaaattgattttgggtaaccgggtgttaca 311  Q
    ||||||||||||||||||||| ||||||||||    
T  22176642 attaaattgattttgggtaacggggtgttaca 22176673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 181 - 261
Target Start/End: Original strand, 44494694 - 44494774
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctg 261  Q
    |||||||||||||||| ||||||||||||||||||||||||     ||||||||||||||||||||||||| |||||||||    
T  44494694 gatgtttattaaatagattttatattctatttaagaaaatttgaaaatgtagtgtgacatgcccgtttgggaattactctg 44494774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 181 - 261
Target Start/End: Original strand, 7302264 - 7302344
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctg 261  Q
    |||||||||||||||| ||||||||||||||||||||| ||     ||||||||||||||||||||||||| |||||||||    
T  7302264 gatgtttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctg 7302344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 181 - 311
Target Start/End: Complemental strand, 5239534 - 5239403
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtg--tcatgtttatttat 278  Q
    |||||||||||||||||||||||||||||||||||||| ||   | ||||| ||||||||||||| |||||  |||||||| ||     |||||| ||||    
T  5239534 gatgtttattaaatagtttttatattctatttaagaaattttgataatgtattgtgacatgcccg-ttgggttttactctgatgctgtgtgtttaattat 5239436  T
Q  279 tattaaattgattttgggtaaccgggtgttaca 311  Q
    |||| ||||  ||||||||||| ||||||||||    
T  5239435 tatttaattacttttgggtaacggggtgttaca 5239403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 184 - 261
Target Start/End: Original strand, 45136051 - 45136128
Alignment:
Q  184 gtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctg 261  Q
    ||||||||||||| ||||||||||||||||||||| ||     ||||||||||||||||||||||||| |||||||||    
T  45136051 gtttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctg 45136128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 181 - 261
Target Start/End: Original strand, 6609363 - 6609443
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctg 261  Q
    ||||||| |||||||| ||||||||||||||||||||| ||     ||||||||||||||||||||||||| |||||||||    
T  6609363 gatgtttgttaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctg 6609443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 188 - 311
Target Start/End: Complemental strand, 21281508 - 21281386
Alignment:
Q  188 attaaatag-tttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaat 286  Q
    ||||||||| |||||||||||||||||||||| || |  | || ||||||||||||||||||||| ||||||||| ||| |||||||||| ||| | |||    
T  21281508 attaaatagatttttatattctatttaagaaatttaaaat-tgaagtgtgacatgcccgtttgggaattactctgatgt-atgtttatttgttaattaat 21281411  T
Q  287 tgattttgggtaaccgggtgttaca 311  Q
    ||||| | || ||| ||||||||||    
T  21281410 tgattattgggaacggggtgttaca 21281386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 186 - 261
Target Start/End: Complemental strand, 28852953 - 28852878
Alignment:
Q  186 ttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctg 261  Q
    ||||||||||| ||||||||||||||||||||| ||     ||||||||||||||||||||||||| |||||||||    
T  28852953 ttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctg 28852878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 181 - 312
Target Start/End: Complemental strand, 36601155 - 36601027
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaa-attgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttatt 279  Q
    |||||||||||||||| |||||||||||||||||||||  ||||   ||||||||||||||||||||||||  ||||||||| || |||||   ||||||    
T  36601155 gatgtttattaaatagattttatattctatttaagaaatcttga-aaatgtagtgtgacatgcccgtttggaaattactctgatg-catgt---tttatt 36601061  T
Q  280 attaaattga-ttttgggtaaccgggtgttacac 312  Q
    | | |||||| ||||||| ||| |||||||||||    
T  36601060 aattaattgatttttgggaaacggggtgttacac 36601027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 185 - 311
Target Start/End: Original strand, 20984511 - 20984633
Alignment:
Q  185 tttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggg-gattactctggtgtcatgtttatttattatta 283  Q
    |||||||||||||||  ||||||||||||||||| || |   |||||||||||||||||||||||||  ||||||||| |    |  ||||||||||||     
T  20984511 tttattaaatagtttc-atattctatttaagaaattttaaaaatgtagtgtgacatgcccgtttgggttattactctgat----ttattatttattattt 20984605  T
Q  284 aattgattttgggtaaccgggtgttaca 311  Q
    ||||| ||||||||||| ||||||||||    
T  20984606 aattgtttttgggtaacggggtgttaca 20984633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 185 - 311
Target Start/End: Original strand, 21986245 - 21986364
Alignment:
Q  185 tttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaa 284  Q
    |||||||||||||||| ||||||||||||||||||||  |  | ||||||||||||||||||||| |  ||||||||     ||| ||||||| |||| |    
T  21986245 tttattaaatagtttt-atattctatttaagaaaattt-tgaaagtagtgtgacatgcccgtttgagatttactctg-----atgattatttaatattta 21986337  T
Q  285 attgattttgggtaaccgggtgttaca 311  Q
    |||| ||||||||||| ||||||||||    
T  21986338 attgcttttgggtaacggggtgttaca 21986364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 181 - 311
Target Start/End: Complemental strand, 21668388 - 21668259
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaa-attgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatg-tttatttat 278  Q
    |||||||||||||||  |||||||||||||||||||||  |||| ||| |||||||||||||||| ||||||  |||||||| |||  ||  |||||  |    
T  21668388 gatgtttattaaataaattttatattctatttaagaaattttgaatta-gtagtgtgacatgcccatttgggatttactctgatgt--tgaattattatt 21668292  T
Q  279 tattaaattgattttgggtaaccgggtgttaca 311  Q
    |||||||||  ||||||||||| ||||||||||    
T  21668291 tattaaattacttttgggtaacggggtgttaca 21668259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 188 - 308
Target Start/End: Original strand, 20840583 - 20840698
Alignment:
Q  188 attaaatagtttttatattctatttaagaaaatt-gatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaat 286  Q
    ||||||||||||| |||| ||||||||||||||| || ||| |||||||||||||||||||||||  |||||||| ||     ||||||||||| | |||    
T  20840583 attaaatagtttt-atatgctatttaagaaaatttgaatta-gtagtgtgacatgcccgtttgggatttactctgatg----atttatttattaattaat 20840676  T
Q  287 tgattttgggtaaccgggtgtt 308  Q
    |||||||| ||||| |||||||    
T  20840677 tgattttgagtaacagggtgtt 20840698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 183 - 312
Target Start/End: Complemental strand, 22989091 - 22988964
Alignment:
Q  183 tgtttattaaatag-tttttatattctatttaagaaaatt-gatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttatta 280  Q
    |||| ||||||||| |||||||||||||||||||||| || ||   | |||| ||||||||||||||| || | ||||||| ||| ||| ||||||||||    
T  22989091 tgttcattaaatagatttttatattctatttaagaaattttgaa--aagtagcgtgacatgcccgttttggaaatactctgatgt-atgattatttatta 22988995  T
Q  281 ttaaattgattttgggtaaccgggtgttacac 312  Q
    || ||||| ||||||||||| |||||||||||    
T  22988994 tttaattg-ttttgggtaacggggtgttacac 22988964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 181 - 296
Target Start/End: Complemental strand, 34949694 - 34949581
Alignment:
Q  181 gatgtttattaaatag--tttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttat 278  Q
    ||||||||||||||||  ||||| ||||||||||| |||||||     ||||||||||||||||||||||||| ||||||||| || |||||   |||||    
T  34949694 gatgtttattaaatagattttttttattctatttatgaaaatttgaaaatgtagtgtgacatgcccgtttgggaattactctgatg-catgt---tttat 34949599  T
Q  279 tattaaattgattttggg 296  Q
    || | |||||||||||||    
T  34949598 taattaattgattttggg 34949581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 181 - 311
Target Start/End: Original strand, 22064236 - 22064366
Alignment:
Q  181 gatgtttattaaatag-tttttatattctatttaagaaaa--ttgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttattta 277  Q
    |||||| ||||||||| |||||||||||||||||||||||  ||||   |||||||||||||||||||||||||  ||||| || ||| |  ||   |||    
T  22064236 gatgttaattaaatagatttttatattctatttaagaaaattttga-aaatgtagtgtgacatgcccgtttgggttttactatgatgttaaatt--atta 22064332  T
Q  278 ttattaaattgattttgggtaaccgggtgttaca 311  Q
    ||||| ||||||||||||| ||| ||||||||||    
T  22064333 ttatttaattgattttgggaaacggggtgttaca 22064366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 185 - 259
Target Start/End: Complemental strand, 22248542 - 22248468
Alignment:
Q  185 tttattaaatagtttttatattctatttaagaaa-attgatttatgtagtgtgacatgcccgtttggggattactc 259  Q
    |||||||||||| |||||||||||||||||||||  ||||   ||||||||||||||||||||||||| |||||||    
T  22248542 tttattaaatagattttatattctatttaagaaatcttga-aaatgtagtgtgacatgcccgtttgggaattactc 22248468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 181 - 311
Target Start/End: Complemental strand, 11773763 - 11773636
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaa-attgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttatt 279  Q
    |||||||||||||||| |||||||||||||||||||||  ||||   |||||||||| |||| ||||||||| ||||||||| || |||||   ||||||    
T  11773763 gatgtttattaaatagattttatattctatttaagaaatcttga-aaatgtagtgtgtcatgtccgtttgggaattactctgatg-catgt---tttatt 11773669  T
Q  280 attaaattga-ttttgggtaaccgggtgttaca 311  Q
    | | |||||| ||||||| ||| ||||||||||    
T  11773668 aattaattgatttttgggaaacggggtgttaca 11773636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 185 - 311
Target Start/End: Original strand, 21981326 - 21981445
Alignment:
Q  185 tttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaa 284  Q
    |||||||||||||||| ||||||||||||||||||||  |  | ||||||||||||||||||||| |  ||||||     | ||| ||||||| |||| |    
T  21981326 tttattaaatagtttt-atattctatttaagaaaatt-ttgaaagtagtgtgacatgcccgtttgagatttactc-----taatgattatttaatattta 21981418  T
Q  285 attgattttgggtaaccgggtgttaca 311  Q
    |||| ||||||||||| ||||||||||    
T  21981419 attgcttttgggtaacggggtgttaca 21981445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 185 - 311
Target Start/End: Original strand, 22003453 - 22003572
Alignment:
Q  185 tttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaa 284  Q
    |||||||||||||||| |||||||||||||||||||| ||  | ||| |||||||| |||||||| |  ||||||||     ||| ||||||| |||| |    
T  22003453 tttattaaatagtttt-atattctatttaagaaaatt-atgaaagtaatgtgacattcccgtttgagatttactctg-----atgattatttaatattta 22003545  T
Q  285 attgattttgggtaaccgggtgttaca 311  Q
    |||| ||||||||||| ||||||||||    
T  22003546 attgcttttgggtaacggggtgttaca 22003572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 185 - 311
Target Start/End: Original strand, 22011789 - 22011908
Alignment:
Q  185 tttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaa 284  Q
    |||||||||||||||| ||||||||||||||||||||  |  | |||||||||||||||||||||||  ||||||||     ||| ||||||| ||||      
T  22011789 tttattaaatagtttt-atattctatttaagaaaatt-ttgaaagtagtgtgacatgcccgtttgggatttactctg-----atgattatttaatatttc 22011881  T
Q  285 attgattttgggtaaccgggtgttaca 311  Q
    |||| ||||||||||  ||||||||||    
T  22011882 attgcttttgggtaatggggtgttaca 22011908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 183 - 312
Target Start/End: Original strand, 41010115 - 41010241
Alignment:
Q  183 tgtttattaaatagtttttatattctatttaagaaaatt-gatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattat 281  Q
    |||||||||||||||||| |||| |||||||||||| || || ||| | |||||| ||||||||||| || | ||||||| ||| |||  ||||||||||    
T  41010115 tgtttattaaatagtttt-atatactatttaagaaattttgaatta-gaagtgtggcatgcccgttttggaaatactctgatgt-atgactatttattat 41010211  T
Q  282 taaattgattttgggtaaccgggtgttacac 312  Q
    | ||||| ||||||||||| |||||||||||    
T  41010212 ttaattg-ttttgggtaacggggtgttacac 41010241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 181 - 311
Target Start/End: Original strand, 20784522 - 20784648
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggat-tactctggtgtcatgtttatttatt 279  Q
    |||||||||||||||||||| || |||||||||||||| || ||  | |||||||||||||||||||| ||||| |||| || ||   ||||||||||||    
T  20784522 gatgtttattaaatagtttt-atcttctatttaagaaattttataaa-gtagtgtgacatgcccgttttgggatatactttgatg---tgtttatttatt 20784616  T
Q  280 attaaattgattttgggtaaccgggtgttaca 311  Q
    ||| ||||| |||  | |||| ||||||||||    
T  20784617 atttaattgctttgagataacggggtgttaca 20784648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 372 - 429
Target Start/End: Complemental strand, 26838058 - 26838001
Alignment:
Q  372 acacctatgaagttgtctggttagggacgaaataaaattacaacaactcaaatcaaaa 429  Q
    ||||||||| |||| |||||||| ||| |||||||||||||||| |||||||||||||    
T  26838058 acacctatgtagttatctggttatggaagaaataaaattacaacgactcaaatcaaaa 26838001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 181 - 311
Target Start/End: Original strand, 31419396 - 31419526
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgt--ttatttat 278  Q
    ||||| || ||||||||||||||||||||||||  ||  ||||   ||||||||||||||||||||| |||  |||||||| |||  |||  ||| ||||    
T  31419396 gatgtgtaataaatagtttttatattctatttagaaattttgaaa-atgtagtgtgacatgcccgtt-gggttttactctgatgttgtgtgtttaattat 31419493  T
Q  279 tattaaattgattttgggtaaccgggtgttaca 311  Q
    |||| ||||| ||||||||||| ||||||||||    
T  31419494 tatttaattgtttttgggtaacggggtgttaca 31419526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 183 - 251
Target Start/End: Original strand, 14595428 - 14595495
Alignment:
Q  183 tgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggg 251  Q
    |||||||||||||||||| ||||||||||||||||||||     | |||||||||||||||||||||||    
T  14595428 tgtttattaaatagtttt-atattctatttaagaaaattttgaaaagtagtgtgacatgcccgtttggg 14595495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 181 - 311
Target Start/End: Complemental strand, 23824519 - 23824391
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaa--ttgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatg-tttattta 277  Q
    |||||||||||||||||||| ||||||||||||||||||  ||||   ||||||||||||||||||| |||||  |||||||| |||  ||  ||| |||    
T  23824519 gatgtttattaaatagtttt-atattctatttaagaaaaatttga-aaatgtagtgtgacatgcccg-ttgggttttactctgatgt--tgaattaatta 23824425  T
Q  278 ttattaaattgattttgggtaaccgggtgttaca 311  Q
    ||||| ||||  ||||||||||| ||||||||||    
T  23824424 ttatttaattacttttgggtaacggggtgttaca 23824391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 185 - 251
Target Start/End: Original strand, 21968486 - 21968550
Alignment:
Q  185 tttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggg 251  Q
    |||||||||||||||| ||||||||||||||||||||  |  | |||||||||||||||||||||||    
T  21968486 tttattaaatagtttt-atattctatttaagaaaatt-ttgaaagtagtgtgacatgcccgtttggg 21968550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 143 - 250
Target Start/End: Original strand, 25625390 - 25625496
Alignment:
Q  143 aatattccgctgcaaagttt-gatgaaactattttggttgatgtttattaaatagtttttatattctatttaagaaa-attgatttatgtagtgtgacat 240  Q
    ||||||||||||||| |||| | |||||||| |   ||||||||||||||||||| | |||||||||||||||||||  ||||   | ||||||||||||    
T  25625390 aatattccgctgcaaggttttggtgaaactaataaagttgatgtttattaaatag-tattatattctatttaagaaattttga--aaagtagtgtgacat 25625486  T
Q  241 gcccgtttgg 250  Q
    ||||||||||    
T  25625487 gcccgtttgg 25625496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 311
Target Start/End: Original strand, 30767729 - 30767809
Alignment:
Q  227 atgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaattgattttgggtaaccgggtgttaca 311  Q
    |||||||||||||||||||||||||  |||||||| ||| |||||||   |||||| ||||  ||||||||||| ||||||||||    
T  30767729 atgtagtgtgacatgcccgtttgggatttactctgatgt-atgttta---attatttaattacttttgggtaacggggtgttaca 30767809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 271 - 311
Target Start/End: Original strand, 22176709 - 22176749
Alignment:
Q  271 ttatttattattaaattgattttgggtaaccgggtgttaca 311  Q
    ||||||||||||||||||||||||| |||| ||||||||||    
T  22176709 ttatttattattaaattgattttggataacggggtgttaca 22176749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 143 - 218
Target Start/End: Complemental strand, 33087658 - 33087583
Alignment:
Q  143 aatattccgctgcaaagttt-gatgaaactattttggttgatgtttattaaatagtttttatattctatttaagaaa 218  Q
    |||||||| ||||||||||| | ||||||||||   |||| ||||||||||||||| ||| ||||||||||||||||    
T  33087658 aatattccactgcaaagttttggtgaaactattaaagttggtgtttattaaatagtattt-tattctatttaagaaa 33087583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 233 - 312
Target Start/End: Complemental strand, 22385532 - 22385455
Alignment:
Q  233 tgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaattgattttgggtaaccgggtgttacac 312  Q
    |||||||||||||||| || | |||| || ||| ||| |||||||||||| ||||| ||||||||||| |||||||||||    
T  22385532 tgtgacatgcccgttttggaaatactgtgatgt-atgattatttattatttaattg-ttttgggtaacggggtgttacac 22385455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 181 - 250
Target Start/End: Complemental strand, 17053124 - 17053055
Alignment:
Q  181 gatgtttattaaatag-tttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttgg 250  Q
    |||||||| ||||||| |||||||||||||||| ||||| ||||   |||||||||||||||||| |||||    
T  17053124 gatgtttaataaatagatttttatattctatttcagaaatttgaaa-atgtagtgtgacatgcccatttgg 17053055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 198 - 251
Target Start/End: Complemental strand, 25110362 - 25110309
Alignment:
Q  198 ttttatattctatttaagaaaatt-gatttatgtagtgtgacatgcccgtttggg 251  Q
    ||||||||||||||||||||| || || ||| |||||||||||||||||||||||    
T  25110362 ttttatattctatttaagaaattttgaatta-gtagtgtgacatgcccgtttggg 25110309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 214
Target Start/End: Original strand, 11252545 - 11252578
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaa 214  Q
    |||||||||||||||| |||||||||||||||||    
T  11252545 gatgtttattaaatagattttatattctatttaa 11252578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 22743230 - 22743194
Alignment:
Q  179 ttgatgtttattaaatagtttttatattctatttaaga 216  Q
    |||||||||||||||||| |||||||||||||||||||    
T  22743230 ttgatgtttattaaatag-ttttatattctatttaaga 22743194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 218
Target Start/End: Original strand, 24708826 - 24708862
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaa 218  Q
    |||||||||||||||||||| |||||||||||||||||    
T  24708826 gatgtttattaaatagtttt-atattctatttaagaaa 24708862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 251
Target Start/End: Complemental strand, 27889359 - 27889307
Alignment:
Q  199 tttatattctatttaagaaaatt-gatttatgtagtgtgacatgcccgtttggg 251  Q
    |||||||||||||||||||| || ||| || |||||||||||||||||||||||    
T  27889359 tttatattctatttaagaaattttgatata-gtagtgtgacatgcccgtttggg 27889307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 251
Target Start/End: Complemental strand, 27948017 - 27947965
Alignment:
Q  199 tttatattctatttaagaaaatt-gatttatgtagtgtgacatgcccgtttggg 251  Q
    |||||||||||||||||||| || ||| || |||||||||||||||||||||||    
T  27948017 tttatattctatttaagaaattttgatata-gtagtgtgacatgcccgtttggg 27947965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 82; Significance: 2e-38; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 181 - 314
Target Start/End: Original strand, 29555089 - 29555221
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttatta 280  Q
    |||||||||||||||| ||||||||||||||||||||| ||     ||||||||||||||||||||||||  ||||||||| || |||||||||||||||    
T  29555089 gatgtttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttggaaattactctgatg-catgtttatttatta 29555187  T
Q  281 ttaaattgattttgggtaaccgggtgttacacac 314  Q
    |||||||||||||||||||| |||||||||||||    
T  29555188 ttaaattgattttgggtaacggggtgttacacac 29555221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 180 - 311
Target Start/End: Original strand, 2341665 - 2341795
Alignment:
Q  180 tgatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttatt 279  Q
    ||||||||||||||||| ||||||||||||||||||||  ||     ||||||||||||||||||||||||| ||||||||| || ||||||||||||||    
T  2341665 tgatgtttattaaatagattttatattctatttaagaatttttgaaaatgtagtgtgacatgcccgtttgggaattactctgatg-catgtttatttatt 2341763  T
Q  280 attaaattgattttgggtaaccgggtgttaca 311  Q
    ||||||||||||||||| ||| ||||||||||    
T  2341764 attaaattgattttgggaaacggggtgttaca 2341795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 181 - 311
Target Start/End: Complemental strand, 19858690 - 19858561
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttatta 280  Q
    |||||||||||||||||||||||||||||||| ||||| ||     |||||||||||||||||||||||||  |||||||| ||| ||||||| ||||||    
T  19858690 gatgtttattaaatagtttttatattctatttcagaaattttgaaaatgtagtgtgacatgcccgtttgggatttactctgatgt-atgtttaattatta 19858592  T
Q  281 ttaaattgattttgggtaaccgggtgttaca 311  Q
    || ||||||||||||||||| ||||||||||    
T  19858591 tttaattgattttgggtaacggggtgttaca 19858561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 181 - 313
Target Start/End: Original strand, 43631461 - 43631592
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttatta 280  Q
    |||| ||||||||||| ||||||||||||||||||||||||     ||||||||||||||||||||||| | ||||||||| || |||||||||||||||    
T  43631461 gatgcttattaaatagattttatattctatttaagaaaatttgaaaatgtagtgtgacatgcccgtttgagaattactctgatg-catgtttatttatta 43631559  T
Q  281 ttaaattgattttgggtaaccgggtgttacaca 313  Q
     | ||||||||||||  ||| ||||||||||||    
T  43631560 attaattgattttggaaaacggggtgttacaca 43631592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 181 - 312
Target Start/End: Complemental strand, 11944604 - 11944474
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttatta 280  Q
    |||| ||||||||||| ||||||||||||||||||||||||     |||||||||||||||||| |||||| ||||||||| || ||||||||||||||     
T  11944604 gatgcttattaaatagattttatattctatttaagaaaatttgaaaatgtagtgtgacatgcccatttgggaattactctgatg-catgtttatttattt 11944506  T
Q  281 ttaaattgattttgggtaaccgggtgttacac 312  Q
     | ||||||||||||| ||| |||||||||||    
T  11944505 attaattgattttgggaaacggggtgttacac 11944474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 181 - 311
Target Start/End: Original strand, 20824994 - 20825123
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttatta 280  Q
    ||||||||||||||||  |||||||||||||||||||| ||     ||||||||||||||||||||||||| | ||||||| || |||||||||||||||    
T  20824994 gatgtttattaaatagaatttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggaactactctgatg-catgtttatttatta 20825092  T
Q  281 ttaaattgattttgggtaaccgggtgttaca 311  Q
     | ||||||||||||| ||| ||||||||||    
T  20825093 attaattgattttgggaaacggggtgttaca 20825123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 227 - 311
Target Start/End: Original strand, 29240490 - 29240573
Alignment:
Q  227 atgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaattgattttgggtaaccgggtgttaca 311  Q
    ||||||||||||||||||||||||| ||||||||| || |||||||||||||||||||||||||||| |||||| ||||||||||    
T  29240490 atgtagtgtgacatgcccgtttgggaattactctgatg-catgtttatttattattaaattgattttaggtaacggggtgttaca 29240573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 181 - 312
Target Start/End: Complemental strand, 19852555 - 19852425
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttatta 280  Q
    |||||||||||||||||||||||||||||||| ||||| ||     ||||||||||||||||||||||| |  |||||||| ||| ||||||| ||||||    
T  19852555 gatgtttattaaatagtttttatattctattttagaaattttgaaaatgtagtgtgacatgcccgtttgagatttactctgatgt-atgtttaattatta 19852457  T
Q  281 ttaaattgattttgggtaaccgggtgttacac 312  Q
    || ||||  ||||||||||| |||||||||||    
T  19852456 tttaatttcttttgggtaacggggtgttacac 19852425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 181 - 311
Target Start/End: Original strand, 20838813 - 20838942
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttatta 280  Q
    ||||||||||||||||  |||||||||||||||||||| ||     ||||||||||||||||||||||||  | ||||||| || |||||||||||||||    
T  20838813 gatgtttattaaatagaatttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttggaaactactctgatg-catgtttatttatta 20838911  T
Q  281 ttaaattgattttgggtaaccgggtgttaca 311  Q
     | ||||||||||||| ||| ||||||||||    
T  20838912 attaattgattttgggaaacggggtgttaca 20838942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 202 - 311
Target Start/End: Complemental strand, 21729690 - 21729582
Alignment:
Q  202 atattctatttaagaaaatt-gatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaattgattttgggtaac 300  Q
    |||||||||||||||||||| ||  || |||||||||||||||||||||||  |||||||| ||| |||||||||||||||||||||| |||||||||||    
T  21729690 atattctatttaagaaaatttgaaata-gtagtgtgacatgcccgtttgggatttactctgatgt-atgtttatttattattaaattgtttttgggtaac 21729593  T
Q  301 cgggtgttaca 311  Q
     ||||||||||    
T  21729592 ggggtgttaca 21729582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 181 - 311
Target Start/End: Original strand, 23196232 - 23196359
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttatta 280  Q
    |||||||||||||||||||||||||||||||||||||| ||     |||||||||||||||||||||||||  |||||||| ||| ||| ||| ||||||    
T  23196232 gatgtttattaaatagtttttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggatttactctgatgt-atg-ttaattatta 23196329  T
Q  281 ttaaattgattttgggtaaccgggtgttaca 311  Q
    || ||||| ||||||||||| ||||||||||    
T  23196330 tt-aattgcttttgggtaacggggtgttaca 23196359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 181 - 311
Target Start/End: Original strand, 19667388 - 19667515
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgattt--atgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttat 278  Q
    ||||||||||||||||||||||||||||||||||    |||  |||  |||||||||||||| ||||||||||  |||||||| ||| ||||||| ||||    
T  19667388 gatgtttattaaatagtttttatattctatttaa----atttttttgaatgtagtgtgacatacccgtttgggatttactctgatgt-atgtttaattat 19667482  T
Q  279 tattaaattgattttgggtaaccgggtgttaca 311  Q
    |||| ||||| ||||||||||| ||||||||||    
T  19667483 tatttaattgcttttgggtaacggggtgttaca 19667515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 188 - 312
Target Start/End: Complemental strand, 20639778 - 20639659
Alignment:
Q  188 attaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaatt 287  Q
    ||||||||||||| ||||||||||||||||||||     ||||||||||||||||||||| |||| |||||||| ||| |||||||   |||||| ||||    
T  20639778 attaaatagtttt-atattctatttaagaaaatttgaaaatgtagtgtgacatgcccgttgggggtttactctgatgt-atgttta---attatttaatt 20639684  T
Q  288 gattttgggtaaccgggtgttacac 312  Q
    | ||||||||||| |||||||||||    
T  20639683 gcttttgggtaacggggtgttacac 20639659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 188 - 311
Target Start/End: Complemental strand, 21663676 - 21663555
Alignment:
Q  188 attaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggat-tactctggtgtcatgtttatttattattaaat 286  Q
    ||||||||||||||| ||||||||||||||| ||     |||||||||||||||| ||||| ||||| ||||||| |||   |||||||||||||| ||     
T  21663676 attaaatagtttttacattctatttaagaaattttgaaaatgtagtgtgacatgcacgttttgggatatactctgatgt---gtttatttattatttaaa 21663580  T
Q  287 tgattttgggtaaccgggtgttaca 311  Q
    |||||||||||||| ||||||||||    
T  21663579 tgattttgggtaacggggtgttaca 21663555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 181 - 311
Target Start/End: Original strand, 20032646 - 20032771
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttatta 280  Q
    |||||||||||||||| ||||||||||||||||||||| ||     || |||||||||||||||||||| | ||||||||| || |||||||||| |||     
T  20032646 gatgtttattaaatagattttatattctatttaagaaattttgaaaatatagtgtgacatgcccgtttgagaattactctgatg-catgtttattaatt- 20032743  T
Q  281 ttaaattgattttgggtaaccgggtgttaca 311  Q
       ||||||||||||| ||| ||||||||||    
T  20032744 ---aattgattttgggaaacggggtgttaca 20032771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 172 - 312
Target Start/End: Original strand, 3707389 - 3707529
Alignment:
Q  172 attttggttgatgttta-ttaaatagtttttatat--tctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcat 268  Q
    |||||| | |||||||| |||||||| ||||||||  ||||||||||||| ||||  | ||||||||||||||||||||||||  |||||||| |||  |    
T  3707389 attttgatggatgtttaattaaatagattttatatattctatttaagaaatttgaaat-tgtagtgtgacatgcccgtttgggttttactctgatgt--t 3707485  T
Q  269 gtttatttattattaaattgattttgggtaaccgggtgttacac 312  Q
    |   | |||||||| ||||||||||||| ||| |||||||||||    
T  3707486 gaaaaattattatttaattgattttgggaaactgggtgttacac 3707529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 181 - 312
Target Start/End: Original strand, 19664764 - 19664895
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaa-ttgatttatgtagtgtgacatgcccgtttggg-gattactctggtgtcatgtttatttat 278  Q
    |||||||||||||||| ||||||| | ||||||  |||  |||||||| |||||||||||||||||||||||  | ||||||| || |||||||||||||    
T  19664764 gatgtttattaaatagattttatactatatttacaaaatgttgattta-gtagtgtgacatgcccgtttgggttaatactctgatg-catgtttatttat 19664861  T
Q  279 tattaaattgattttgggtaaccgggtgttacac 312  Q
    || | |||||||| | || ||| |||||||||||    
T  19664862 taattaattgattattgggaacggggtgttacac 19664895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 143 - 217
Target Start/End: Original strand, 21987633 - 21987707
Alignment:
Q  143 aatattccgctgcaaagttt-gatgaaactattttggttgatgtttattaaatagtttttatattctatttaagaa 217  Q
    |||||||||||||||||||| | ||||||||||   |||||||||||||||||||| ||| |||||||||||||||    
T  21987633 aatattccgctgcaaagttttggtgaaactattaaagttgatgtttattaaatagtattt-tattctatttaagaa 21987707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 143 - 250
Target Start/End: Original strand, 21746382 - 21746488
Alignment:
Q  143 aatattccgctgcaaag-tttgatgaaactattttggttgatgtttattaaatagtttttatattctatttaagaaa-attgatttatgtagtgtgacat 240  Q
    ||||||||||||||||| |||| ||||||||||   |||||||||||||||| ||| ||| ||||||||||||||||  ||||   | ||||||||||||    
T  21746382 aatattccgctgcaaagttttggtgaaactattaaagttgatgtttattaaaaagtattt-tattctatttaagaaattttga--aaagtagtgtgacat 21746478  T
Q  241 gcccgtttgg 250  Q
    ||||||||||    
T  21746479 gcccgtttgg 21746488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 144 - 311
Target Start/End: Original strand, 11141632 - 11141796
Alignment:
Q  144 atattccgctgcaaagttt-gatgaaactattttggttgatgtttattaaatagtttttatattctatttaagaaa-attgatttatgtagtgtgacatg 241  Q
    |||||||||||||| |||| ||||||||| ||   |||| |||||||||||||| |||||||||||||||||||||  ||||   | |||||||||||||    
T  11141632 atattccgctgcaaggttttgatgaaactgttaaagttggtgtttattaaatag-ttttatattctatttaagaaattttga--aaagtagtgtgacatg 11141728  T
Q  242 cccg-tttggggat-tactctggtgtcatgtttatttattattaaattgattttggg-taaccgggtgttaca 311  Q
    |||| ||||| ||| |||||||     || ||||||||||||| ||||| ||||||| |||| ||||||||||    
T  11141729 cccgttttggtgatatactctg-----atatttatttattatttaattgtttttgggataacggggtgttaca 11141796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 143 - 251
Target Start/End: Original strand, 21411309 - 21411417
Alignment:
Q  143 aatattccgctgcaaagttt-gatgaaactattttggttgatg-tttattaaatagtttttatattctatttaagaaaa-ttgatttatgtagtgtgaca 239  Q
    ||||||||||||||| |||| | |||||||||||  |||  || |||||||||||||||| |||||||||||||||||| ||||   | |||||||||||    
T  21411309 aatattccgctgcaaggttttggtgaaactatttaagtttgtggtttattaaatagtttt-atattctatttaagaaaatttga--aaagtagtgtgaca 21411405  T
Q  240 tgcccgtttggg 251  Q
    ||||||||||||    
T  21411406 tgcccgtttggg 21411417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 181 - 251
Target Start/End: Complemental strand, 47483622 - 47483551
Alignment:
Q  181 gatgtttattaaatag-tttttatattctatttaagaaaatt-gatttatgtagtgtgacatgcccgtttggg 251  Q
    |||||||| ||||||| |||||||||||||||||||||| || ||| || |||||||||||||||||||||||    
T  47483622 gatgtttaataaatagatttttatattctatttaagaaattttgatata-gtagtgtgacatgcccgtttggg 47483551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 185 - 251
Target Start/End: Complemental strand, 18710222 - 18710156
Alignment:
Q  185 tttattaaatagtttttatattctatttaagaaaa-ttgatttatgtagtgtgacatgcccgtttggg 251  Q
    |||||||||||||||| |||||||||||||||||| ||||   ||| |||||||||||||||||||||    
T  18710222 tttattaaatagtttt-atattctatttaagaaaatttgaaaaatgaagtgtgacatgcccgtttggg 18710156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 179 - 275
Target Start/End: Original strand, 31928074 - 31928169
Alignment:
Q  179 ttgatgtttattaaatagtttttatattctatttaagaaa-attgatttatgtagtgtgacatgcccgtttggggat-tactctggtgtcatgtttatt 275  Q
    |||||||||||||||||| |||||||||||||||||||||  ||||   | |||||||||||||||||||||| ||| ||||||| ||| || ||||||    
T  31928074 ttgatgtttattaaatag-ttttatattctatttaagaaattttga--aaagtagtgtgacatgcccgtttggtgatatactctgatgttatatttatt 31928169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 227 - 312
Target Start/End: Original strand, 42096682 - 42096763
Alignment:
Q  227 atgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaattgattttgggtaaccgggtgttacac 312  Q
    |||||||||||||||||||||||||  |||||||| ||| |||||||   |||||| ||||  ||||||||||| |||||||||||    
T  42096682 atgtagtgtgacatgcccgtttgggatttactctgatgt-atgttta---attatttaattacttttgggtaacggggtgttacac 42096763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 143 - 248
Target Start/End: Original strand, 7793407 - 7793511
Alignment:
Q  143 aatattccgctgcaaagttt-gatgaaactattttggttgatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatg 241  Q
    ||||||||||||||| |||| | |||||||| |   ||||||||||||||||||| | ||||||||||||||||||  ||||  || | |||||||||||    
T  7793407 aatattccgctgcaaggttttggtgaaactaataaagttgatgtttattaaatag-tattatattctatttaagaattttgaaata-gcagtgtgacatg 7793504  T
Q  242 cccgttt 248  Q
    |||||||    
T  7793505 cccgttt 7793511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 185 - 251
Target Start/End: Complemental strand, 20848547 - 20848482
Alignment:
Q  185 tttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggg 251  Q
    |||||||||||||||| ||||||||||||||||||||     | |||||||||||||||||||||||    
T  20848547 tttattaaatagtttt-atattctatttaagaaaattttgaaaagtagtgtgacatgcccgtttggg 20848482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 181 - 247
Target Start/End: Complemental strand, 21541403 - 21541337
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaa--ttgatttatgtagtgtgacatgcccgtt 247  Q
    |||||||||||||||||||| ||||||||||||||||||  ||||   |||||||||||||||||||||    
T  21541403 gatgtttattaaatagtttt-atattctatttaagaaaaatttga-aaatgtagtgtgacatgcccgtt 21541337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 181 - 311
Target Start/End: Original strand, 24109709 - 24109839
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcat--gtttatttat 278  Q
    |||| ||| |||||||||||||||||||||||| |||  ||||   ||||||||||||||||||| ||||   |||||||| |||  |  ||||| ||||    
T  24109709 gatgcttaataaatagtttttatattctatttaggaattttga-aaatgtagtgtgacatgcccg-ttggattttactctgatgttgtgcgtttaattat 24109806  T
Q  279 tattaaattgattttgggtaaccgggtgttaca 311  Q
    |||| ||||  ||||||||||| ||||||||||    
T  24109807 tatttaattacttttgggtaacggggtgttaca 24109839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 373 - 441
Target Start/End: Complemental strand, 1174013 - 1173946
Alignment:
Q  373 cacctatgaagttgtctggttagggacgaaataaaattacaacaactcaaatcaaaacactataaaatg 441  Q
    ||||||||||||||||||||||||||  ||| ||||||||||| ||| || |||||||| || ||||||    
T  1174013 cacctatgaagttgtctggttaggga-aaaacaaaattacaacgactaaattcaaaacaatacaaaatg 1173946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 179 - 218
Target Start/End: Original strand, 20087156 - 20087194
Alignment:
Q  179 ttgatgtttattaaatagtttttatattctatttaagaaa 218  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  20087156 ttgatgtttattaaatag-ttttatattctatttaagaaa 20087194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 180 - 218
Target Start/End: Complemental strand, 23711986 - 23711949
Alignment:
Q  180 tgatgtttattaaatagtttttatattctatttaagaaa 218  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  23711986 tgatgtttattaaatagtttt-atattctatttaagaaa 23711949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 218
Target Start/End: Complemental strand, 21697648 - 21697612
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaa 218  Q
    |||||||||||||||||||| |||||||||||||||||    
T  21697648 gatgtttattaaatagtttt-atattctatttaagaaa 21697612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 218
Target Start/End: Complemental strand, 23630466 - 23630430
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaa 218  Q
    |||||||||||||||||||| |||||||||||||||||    
T  23630466 gatgtttattaaatagtttt-atattctatttaagaaa 23630430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 143 - 214
Target Start/End: Original strand, 15317131 - 15317202
Alignment:
Q  143 aatattccgctgcaaag-tttgatgaaactattttggttgatgtttattaaatagtttttatattctatttaa 214  Q
    ||||||||||||||||| |||||||||||  |||  |||| | |||||||||||| ||||||| |||||||||    
T  15317131 aatattccgctgcaaagttttgatgaaaccgtttaagttgttttttattaaatag-ttttataatctatttaa 15317202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 80; Significance: 3e-37; HSPs: 5)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 181 - 312
Target Start/End: Complemental strand, 258027 - 257897
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttatta 280  Q
    |||||||||||||||| ||||||||||||||||||||| ||     ||||||||||| ||||||||||||| ||||||||| || |||||||||||||||    
T  258027 gatgtttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgatatgcccgtttgggaattactctgatg-catgtttatttatta 257929  T
Q  281 ttaaattgattttgggtaaccgggtgttacac 312  Q
    |||||||||||||||||||| |||||||||||    
T  257928 ttaaattgattttgggtaacggggtgttacac 257897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 181 - 312
Target Start/End: Complemental strand, 251408 - 251278
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttatta 280  Q
    |||||||||||||||||||||||||||||||||||||| ||     |||||||||||||||||||||||||  ||||| || ||| ||||||| ||||||    
T  251408 gatgtttattaaatagtttttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggatttactttgatgt-atgtttaattatta 251310  T
Q  281 ttaaattgattttgggtaaccgggtgttacac 312  Q
    || ||||| ||||||||||| |||||||||||    
T  251309 tttaattgcttttgggtaacggggtgttacac 251278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 181 - 311
Target Start/End: Complemental strand, 146530 - 146407
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaatt-gatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttatt 279  Q
    |||||||||||||||||||| ||| ||||||||||||| || ||   | |||||||||||||||||||||||  ||||||||     ||| |||| ||||    
T  146530 gatgtttattaaatagtttt-ataatctatttaagaaattttgaa--aagtagtgtgacatgcccgtttgggatttactctg-----atgattatatatt 146439  T
Q  280 attaaattgattttgggtaaccgggtgttaca 311  Q
    ||| ||||| ||||| ||||| ||||||||||    
T  146438 atttaattgcttttgtgtaacggggtgttaca 146407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 181 - 310
Target Start/End: Original strand, 57422 - 57544
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaa-ttgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttatt 279  Q
    |||||||||||||||| |||||| ||||||||||||||| ||||   | |||||||||||||||||||||||   |||||||     |||||||||| ||    
T  57422 gatgtttattaaatag-ttttatgttctatttaagaaaatttga--aaagtagtgtgacatgcccgtttgggatatactctg-----atgtttatttgtt 57513  T
Q  280 attaaattgattttgggtaaccgggtgttac 310  Q
    ||| ||||| ||| || |||| |||||||||    
T  57514 atttaattgttttgggataacggggtgttac 57544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 311
Target Start/End: Original strand, 175340 - 175420
Alignment:
Q  227 atgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaattgattttgggtaaccgggtgttaca 311  Q
    |||||||||||||||||||||||||  |||||||| ||| |||||||   |||||| ||||  ||||||||||| ||||||||||    
T  175340 atgtagtgtgacatgcccgtttgggatttactctgatgt-atgttta---attatttaattacttttgggtaacggggtgttaca 175420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 80; Significance: 3e-37; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 181 - 312
Target Start/End: Original strand, 22759853 - 22759983
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttatta 280  Q
    |||||||||||||||| ||||||||||||||||||||| ||     ||||||||||||||||||||||||| ||||||||| || |||||||||||||||    
T  22759853 gatgtttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctgatg-catgtttatttatta 22759951  T
Q  281 ttaaattgattttgggtaaccgggtgttacac 312  Q
    |||||||||||||||| ||| |||||||||||    
T  22759952 ttaaattgattttgggaaacggggtgttacac 22759983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 188 - 311
Target Start/End: Original strand, 22233294 - 22233416
Alignment:
Q  188 attaaatagtttttatattctatttaagaaaatt-gatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaat 286  Q
    |||||||||||||||||||||||||||||||||| || ||| |||||||||||||| ||||||||  |||||||| ||| ||||||||||||||||||||    
T  22233294 attaaatagtttttatattctatttaagaaaatttgaatta-gtagtgtgacatgctcgtttgggatttactctgatgt-atgtttatttattattaaat 22233391  T
Q  287 tgattttgggtaaccgggtgttaca 311  Q
    || ||||||||||| ||||||||||    
T  22233392 tgtttttgggtaacggggtgttaca 22233416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 181 - 311
Target Start/End: Original strand, 6728905 - 6729034
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttatta 280  Q
    |||||||||||||||| ||||||||||||||||| ||| ||     ||||||||||||||| ||||||||| ||||||||| || |||||||| ||||||    
T  6728905 gatgtttattaaatagattttatattctatttaataaattttgaaaatgtagtgtgacatgtccgtttgggaattactctgatg-catgtttaattatta 6729003  T
Q  281 ttaaattgattttgggtaaccgggtgttaca 311  Q
    |||||||||||||||||||| ||||||||||    
T  6729004 ttaaattgattttgggtaacggggtgttaca 6729034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 181 - 313
Target Start/End: Complemental strand, 19075499 - 19075368
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttatta 280  Q
    |||| ||||||||||| ||||||||||||||||||||||||     ||||||||||||||||||||||||| ||||||||| || |||||||| ||||||    
T  19075499 gatgcttattaaatagattttatattctatttaagaaaatttgaaaatgtagtgtgacatgcccgtttgggaattactctgatg-catgtttaattatta 19075401  T
Q  281 ttaaattgattttgggtaaccgggtgttacaca 313  Q
     | ||||||||||||| ||| ||||||||||||    
T  19075400 attaattgattttgggaaacggggtgttacaca 19075368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 188 - 311
Target Start/End: Original strand, 22237858 - 22237980
Alignment:
Q  188 attaaatagtttttatattctatttaagaaaatt-gatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaat 286  Q
    |||||||||||||||||||||||||||||||||| || ||| |||||||||||||| ||||||||  |||||||  ||| ||||||||||||||||||||    
T  22237858 attaaatagtttttatattctatttaagaaaatttgaatta-gtagtgtgacatgctcgtttgggatttactcttatgt-atgtttatttattattaaat 22237955  T
Q  287 tgattttgggtaaccgggtgttaca 311  Q
    || ||||||||||| ||||||||||    
T  22237956 tgtttttgggtaacggggtgttaca 22237980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 181 - 312
Target Start/End: Original strand, 31253679 - 31253809
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttatta 280  Q
    |||| ||||||||||| ||||||||||||||||||||||||     ||| ||||||||||||||||||||| ||||||||| || |||||||||||||||    
T  31253679 gatgcttattaaatagattttatattctatttaagaaaatttgaaaatggagtgtgacatgcccgtttgggaattactctgatg-catgtttatttatta 31253777  T
Q  281 ttaaattgattttgggtaaccgggtgttacac 312  Q
     | ||||||||||||| ||| |||||||||||    
T  31253778 attaattgattttgggaaacggggtgttacac 31253809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 188 - 313
Target Start/End: Original strand, 22008544 - 22008668
Alignment:
Q  188 attaaatagtttttatattctatttaagaaaatt-gatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaat 286  Q
    ||||||||| ||||||||||||||||||||| || || ||| |||||||||||||||||||||||  |||||||| ||| |||||||||||||| | |||    
T  22008544 attaaatagattttatattctatttaagaaattttgaatta-gtagtgtgacatgcccgtttgggatttactctgatgt-atgtttatttattaattaat 22008641  T
Q  287 tgattttgggtaaccgggtgttacaca 313  Q
    |||||||||||||| ||||||||||||    
T  22008642 tgattttgggtaacggggtgttacaca 22008668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 60 - 218
Target Start/End: Complemental strand, 426857 - 426698
Alignment:
Q  60 gattatggttttactttggtgaggcttttataccaagactgtt-attagagaatcacacattt-atgctgttgttattgatgatgaatattccgctgcaa 157  Q
    |||||||| |||| |||| |||| ||||||| ||||||||||| | | |||||||| |||||| ||| ||||||| || ||||  |||||| ||||||||    
T  426857 gattatggatttattttgatgagacttttatgccaagactgtttagtggagaatcaaacatttgatgttgttgtttttcatgaa-aatatttcgctgcaa 426759  T
Q  158 agttt-gatgaaactattttggttgatgtttattaaatagtttttatattctatttaagaaa 218  Q
    ||||| ||||||||| |||  |||| |||||||||||||| ||||||| |||||||||||||    
T  426758 agttttgatgaaactgtttaagttgttgtttattaaatag-ttttataatctatttaagaaa 426698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 185 - 311
Target Start/End: Original strand, 43244399 - 43244520
Alignment:
Q  185 tttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaa 284  Q
    |||||||||||| ||||||||||||||||| ||| ||     ||||||||||||||||||||||||| ||||||||| || |||||||||| |||    |    
T  43244399 tttattaaatagattttatattctatttaacaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctgatg-catgtttattaatt----a 43244493  T
Q  285 attgattttgggtaaccgggtgttaca 311  Q
    |||||||||||| ||| ||||||||||    
T  43244494 attgattttgggaaacggggtgttaca 43244520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 181 - 261
Target Start/End: Complemental strand, 22880069 - 22879989
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctg 261  Q
    |||||||||||||||| ||||||||||||||||||||| ||     ||||||||||||||||||||||||| |||||||||    
T  22880069 gatgtttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctg 22879989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 188 - 311
Target Start/End: Complemental strand, 21661872 - 21661751
Alignment:
Q  188 attaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggat-tactctggtgtcatgtttatttattattaaat 286  Q
    ||||||||||||||||||||||||||||||||||     |||||||||||||||||||||| ||||| |||| || ||   ||||||||||||||| |||    
T  21661872 attaaatagtttttatattctatttaagaaaatttgaaaatgtagtgtgacatgcccgttttgggatatactgtgatg---tgtttatttattatttaat 21661776  T
Q  287 tgattttgggtaaccgggtgttaca 311  Q
     | ||| || |||| ||||||||||    
T  21661775 cgttttgggataacagggtgttaca 21661751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 181 - 311
Target Start/End: Original strand, 33474543 - 33474670
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaa-attgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttatt 279  Q
    |||||||||||||||| |||||||||||||||||||||  ||||   ||||||||||||||||||||||||| ||||||||| || |||||   ||||||    
T  33474543 gatgtttattaaatagattttatattctatttaagaaatcttga-aaatgtagtgtgacatgcccgtttgggaattactctgatg-catgt---tttatt 33474637  T
Q  280 attaaattga-ttttgggtaaccgggtgttaca 311  Q
    | | |||||| ||||||| ||| ||||||||||    
T  33474638 aattaattgatttttgggaaacggggtgttaca 33474670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 184 - 261
Target Start/End: Complemental strand, 43120211 - 43120134
Alignment:
Q  184 gtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctg 261  Q
    ||||||||||||| ||||||||||||||||||||| ||     ||||||||||||||||||||||||| |||||||||    
T  43120211 gtttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctg 43120134  T

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Target: chr5; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 185 - 312
Target Start/End: Original strand, 27636280 - 27636405
Alignment:
Q  185 tttattaaatagtttttatattctatttaagaaaatt-gatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattatta 283  Q
    |||||||||||||||||||| ||||||||||||| || ||  || ||||||||||||||||||| ||  ||||||||  ||| ||||||| ||||||||     
T  27636280 tttattaaatagtttttataatctatttaagaaattttgaaata-gtagtgtgacatgcccgtt-ggaaattactcttatgt-atgtttaattattattt 27636376  T
Q  284 aattgattttgggtaaccgggtgttacac 312  Q
    ||||  ||||||||||| |||||||||||    
T  27636377 aattacttttgggtaacggggtgttacac 27636405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 143 - 311
Target Start/End: Original strand, 21574626 - 21574791
Alignment:
Q  143 aatattccgctgcaaagttt-gatgaaactattttggttgatgttt-attaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacat 240  Q
    ||||||||||||||| |||| ||||||||||||  | ||| ||||| ||||||||||||| ||| ||||||||||||| ||||   | ||||||||||||    
T  21574626 aatattccgctgcaaggttttgatgaaactattaag-ttgttgttttattaaatagtttt-ataatctatttaagaaatttgaa--aagtagtgtgacat 21574721  T
Q  241 gcccgtttggggattactctggtgtcatgtttatttattattaaattgattttgggtaaccgggtgttaca 311  Q
     ||||||||||   ||||||| ||| |||||||||| ||||| ||||| ||| || |||| ||||||||||    
T  21574722 acccgtttgggatatactctgatgt-atgtttatttgttatttaattgctttgggataacggggtgttaca 21574791  T

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Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 184 - 261
Target Start/End: Complemental strand, 43123744 - 43123667
Alignment:
Q  184 gtttattaaatagtttttatattctatttaagaaa-attgatttatgtagtgtgacatgcccgtttggggattactctg 261  Q
    ||||||||||||| |||||||||||||||||||||  ||||  | |||||||||||||||||||||||| |||||||||    
T  43123744 gtttattaaatagattttatattctatttaagaaattttgaaat-tgtagtgtgacatgcccgtttgggaattactctg 43123667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 201 - 312
Target Start/End: Original strand, 30344822 - 30344930
Alignment:
Q  201 tatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaattgattttgggtaac 300  Q
    |||||||||||||||||| ||||  | ||||||||||||||||||||||||  |||||||| |||  ||   | |||||||| ||||||||||||| |||    
T  30344822 tatattctatttaagaaatttgaaat-tgtagtgtgacatgcccgtttgggttttactctgatgt--tgaacaattattatttaattgattttgggaaac 30344918  T
Q  301 cgggtgttacac 312  Q
     |||||||||||    
T  30344919 ggggtgttacac 30344930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 181 - 311
Target Start/End: Original strand, 21676212 - 21676340
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaa--ttgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatg-tttattta 277  Q
    |||||||||||||||||||| ||||||||||||||||||  ||||   ||||||||||||||||||| |||||  |||||||| |||  ||  ||| |||    
T  21676212 gatgtttattaaatagtttt-atattctatttaagaaaaatttga-aaatgtagtgtgacatgcccg-ttgggttttactctgatgt--tgaattaatta 21676306  T
Q  278 ttattaaattgattttgggtaaccgggtgttaca 311  Q
    ||||| ||||  ||||||||||| ||||||||||    
T  21676307 ttatttaattacttttgggtaacggggtgttaca 21676340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 201 - 311
Target Start/End: Original strand, 22509827 - 22509934
Alignment:
Q  201 tatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaattgattttgggtaac 300  Q
    |||||||||||||||||| ||||  | |||||||||||||||||||| |||  |||||||| |||  ||   | |||||||| ||||||||||||| |||    
T  22509827 tatattctatttaagaaatttgaaat-tgtagtgtgacatgcccgttggggttttactctgatgt--tgaaaaattattatttaattgattttgggaaac 22509923  T
Q  301 cgggtgttaca 311  Q
     ||||||||||    
T  22509924 ggggtgttaca 22509934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 201 - 311
Target Start/End: Original strand, 24669700 - 24669807
Alignment:
Q  201 tatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaattgattttgggtaac 300  Q
    |||||||||||||||||| ||||  | ||||||||||||||||||||||||  |||||||| |||  ||   | |||||||| ||||| ||||||| |||    
T  24669700 tatattctatttaagaaatttgaaat-tgtagtgtgacatgcccgtttgggttttactctgatgt--tgaacaattattatttaattggttttgggaaac 24669796  T
Q  301 cgggtgttaca 311  Q
     ||||||||||    
T  24669797 ggggtgttaca 24669807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 201 - 311
Target Start/End: Original strand, 24739469 - 24739576
Alignment:
Q  201 tatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaattgattttgggtaac 300  Q
    |||||||||||||||||| ||||  | ||||||||||||||||||||||||  |||||||| |||  ||   | |||||||| ||||| ||||||| |||    
T  24739469 tatattctatttaagaaatttgaaat-tgtagtgtgacatgcccgtttgggttttactctgatgt--tgaacaattattatttaattggttttgggaaac 24739565  T
Q  301 cgggtgttaca 311  Q
     ||||||||||    
T  24739566 ggggtgttaca 24739576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 201 - 311
Target Start/End: Original strand, 24752238 - 24752345
Alignment:
Q  201 tatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaattgattttgggtaac 300  Q
    |||||||||||||||||| ||||  | ||||||||||||||||||||||||  |||||||| |||  ||   | |||||||| ||||| ||||||| |||    
T  24752238 tatattctatttaagaaatttgaaat-tgtagtgtgacatgcccgtttgggttttactctgatgt--tgaacaattattatttaattggttttgggaaac 24752334  T
Q  301 cgggtgttaca 311  Q
     ||||||||||    
T  24752335 ggggtgttaca 24752345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 233 - 311
Target Start/End: Original strand, 241 - 317
Alignment:
Q  233 tgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaattgattttgggtaaccgggtgttaca 311  Q
    |||||||||||||||| || | ||||||| ||| ||| |||||||||||| |||| |||||||||||| ||||||||||    
T  241 tgtgacatgcccgttttggaaatactctgatgt-atgattatttattatttaatt-attttgggtaacggggtgttaca 317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 311
Target Start/End: Original strand, 1858285 - 1858365
Alignment:
Q  227 atgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaattgattttgggtaaccgggtgttaca 311  Q
    |||||||||||||||||||||||||  |||||||| ||| |||||||   |||||| ||||  ||||||||||| ||||||||||    
T  1858285 atgtagtgtgacatgcccgtttgggatttactctgatgt-atgttta---attatttaattacttttgggtaacggggtgttaca 1858365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 186 - 311
Target Start/End: Complemental strand, 20831218 - 20831095
Alignment:
Q  186 ttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatg-tttatttattattaa 284  Q
    ||||||||||||||| |||| |||||||||||| || |    |||||||||||||| ||| ||||| ||||||||  || |||| |||||||| |||| |    
T  20831218 ttattaaatagtttt-atatgctatttaagaaattttaaaagtgtagtgtgacatgtccg-ttgggaattactctaatg-catgatttatttactattta 20831122  T
Q  285 attgattttgggtaaccgggtgttaca 311  Q
    ||||||||| |||||| ||||||||||    
T  20831121 attgattttaggtaacagggtgttaca 20831095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 312
Target Start/End: Complemental strand, 20937064 - 20936979
Alignment:
Q  227 atgtagtgtgacatgcccgtttgggga-ttactctggtgtcatgtttatttattattaaattgattttgggtaaccgggtgttacac 312  Q
    |||||||||  ||||||||||||| || |||||||| ||| ||| |||||||||||| |||||| |||||| ||| |||||||||||    
T  20937064 atgtagtgtagcatgcccgtttggtgaattactctgatgt-atgattatttattatttaattgaatttgggaaacggggtgttacac 20936979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 181 - 251
Target Start/End: Original strand, 23562259 - 23562328
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggg 251  Q
    |||||||||||||||| ||||||||| ||||||||||||||     | |||||||||||||||||||||||    
T  23562259 gatgtttattaaatag-ttttatattatatttaagaaaattttgaaaagtagtgtgacatgcccgtttggg 23562328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 181 - 250
Target Start/End: Complemental strand, 20842687 - 20842619
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttgg 250  Q
    |||||||||||||||||||| ||||||||||||||||||||     | || |||||||||||||||||||    
T  20842687 gatgtttattaaatagtttt-atattctatttaagaaaattttgaaaagttgtgtgacatgcccgtttgg 20842619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 227 - 311
Target Start/End: Original strand, 22313534 - 22313618
Alignment:
Q  227 atgtagtgtgacatgcccgtttgggga-ttactctggtgtcatgtttatttattattaaattgattttgggtaaccgggtgttaca 311  Q
    |||||||||  ||||||||||||| || |||||||| ||| ||| |||||||||||| |||||| |||||| ||| ||||||||||    
T  22313534 atgtagtgtagcatgcccgtttggtgagttactctgatgt-atgattatttattatttaattgaatttgggaaacggggtgttaca 22313618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 178 - 218
Target Start/End: Original strand, 21905951 - 21905990
Alignment:
Q  178 gttgatgtttattaaatagtttttatattctatttaagaaa 218  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  21905951 gttgatgtttattaaatag-ttttatattctatttaagaaa 21905990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 180 - 249
Target Start/End: Complemental strand, 25013142 - 25013075
Alignment:
Q  180 tgatgtttattaaatagtttttatattctatttaagaaa-attgatttatgtagtgtgacatgcccgtttg 249  Q
    ||||||||||||||||||||| |||||||||||||||||  ||||   | |||||||||||||||||||||    
T  25013142 tgatgtttattaaatagtttt-atattctatttaagaaattttga--aaagtagtgtgacatgcccgtttg 25013075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 201 - 311
Target Start/End: Original strand, 758924 - 759029
Alignment:
Q  201 tatattctatttaagaaaattgatttatgtagtgtgacatgcccgttt--ggggattactctggtgtcatgtttatttattattaaattgattttgggta 298  Q
    |||||| ||||||||||| ||||  | |||||||||||||||||||||  |||  |||||||| |||      ||||||||||||||||||||||||  |    
T  758924 tatattttatttaagaaatttgaaat-tgtagtgtgacatgcccgtttttgggatttactctgatgt------tatttattattaaattgattttggaaa 759016  T
Q  299 accgggtgttaca 311  Q
    || ||||||||||    
T  759017 acggggtgttaca 759029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 180 - 218
Target Start/End: Complemental strand, 18818418 - 18818381
Alignment:
Q  180 tgatgtttattaaatagtttttatattctatttaagaaa 218  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  18818418 tgatgtttattaaatagtttt-atattctatttaagaaa 18818381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 201 - 261
Target Start/End: Complemental strand, 34828509 - 34828449
Alignment:
Q  201 tatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctg 261  Q
    |||||||||||||| ||| ||   | |||||||||||||||||||||||||  ||||||||    
T  34828509 tatattctatttaataaattttgatgatgtagtgtgacatgcccgtttgggttttactctg 34828449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 79; Significance: 1e-36; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 181 - 311
Target Start/End: Complemental strand, 2707900 - 2707771
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttatta 280  Q
    |||||||||||||||| ||||||||||||||||||||| || |   ||||||||||||||||||||||||| ||||||||| || |||||||||| ||||    
T  2707900 gatgtttattaaatagattttatattctatttaagaaattttaaaaatgtagtgtgacatgcccgtttgggaattactctgatg-catgtttattcatta 2707802  T
Q  281 ttaaattgattttgggtaaccgggtgttaca 311  Q
    ||| |||||||||||||||| ||||||||||    
T  2707801 ttatattgattttgggtaacggggtgttaca 2707771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 60 - 249
Target Start/End: Complemental strand, 24720227 - 24720039
Alignment:
Q  60 gattatggttttactttggtgaggcttttataccaagactgtt-attagagaatcacacattt-atgctgttgttattgatgatgaatattccgctgcaa 157  Q
    |||||||| |||| |||| |||||||||||| ||||||||||| | | |||||||| |||||| ||| ||||||| || ||||  |||||||||||||||    
T  24720227 gattatggatttattttgatgaggcttttatgccaagactgtttagtggagaatcaaacatttgatgttgttgtttttaatgaa-aatattccgctgcaa 24720129  T
Q  158 agtttgatgaaactattttggttgatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttg 249  Q
    |||||||||||||| |||  |||| |||||||||||||| ||||||| ||||||||||||| || |   | |||||||||||||||||||||    
T  24720128 agtttgatgaaactgtttaagttgttgtttattaaatag-ttttataatctatttaagaaatttta-aaaagtagtgtgacatgcccgtttg 24720039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 185 - 311
Target Start/End: Original strand, 14595322 - 14595447
Alignment:
Q  185 tttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaa 284  Q
    |||||||||||| ||||||||||||||||||||| ||     ||||||||||||||||||||||||| ||||||||| || ||||||||||||||| | |    
T  14595322 tttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctgatg-catgtttatttattaatta 14595420  T
Q  285 attgattttgggtaaccgggtgttaca 311  Q
    |||||||||||| ||| ||||||||||    
T  14595421 attgattttgggaaacggggtgttaca 14595447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 181 - 311
Target Start/End: Complemental strand, 28707469 - 28707340
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttatta 280  Q
    |||| ||||||||||| ||||||||||||||||||||||||     ||||||||||||||||||||||||| ||||||||| || |||||||| ||||||    
T  28707469 gatgcttattaaatagattttatattctatttaagaaaatttgaaaatgtagtgtgacatgcccgtttgggaattactctgatg-catgtttaattatta 28707371  T
Q  281 ttaaattgattttgggtaaccgggtgttaca 311  Q
     | ||||||||||||| ||| ||||||||||    
T  28707370 attaattgattttgggaaacagggtgttaca 28707340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 227 - 311
Target Start/End: Complemental strand, 14723855 - 14723772
Alignment:
Q  227 atgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaattgattttgggtaaccgggtgttaca 311  Q
    ||||||||||||||||||||||||| ||||||||| || |||||||||||||||||||||||||||||||||||  |||||||||    
T  14723855 atgtagtgtgacatgcccgtttgggaattactctgatg-catgtttatttattattaaattgattttgggtaacgaggtgttaca 14723772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 183 - 312
Target Start/End: Original strand, 14384076 - 14384202
Alignment:
Q  183 tgtttattaaatagtttttatattctatttaagaaaatt-gatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattat 281  Q
    |||||||||||||||||| |||| |||||||||||| || || ||| ||||||||||||||||||||| | ||||||||| || ||||||||||||||||    
T  14384076 tgtttattaaatagtttt-atatactatttaagaaattttgaatta-gtagtgtgacatgcccgtttgagaattactctgatg-catgtttatttattat 14384172  T
Q  282 taaattgattttgggtaaccgggtgttacac 312  Q
    | ||||| ||||||||||| |||||||||||    
T  14384173 ttaattg-ttttgggtaacggggtgttacac 14384202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 181 - 311
Target Start/End: Original strand, 24514480 - 24514609
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttatta 280  Q
    ||||| |||||||||| |||||||||||||||| |||| ||     ||||||||||||||||||||||||| ||||||||| || ||||||| |||||||    
T  24514480 gatgtgtattaaatagattttatattctatttatgaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctgatg-catgtttgtttatta 24514578  T
Q  281 ttaaattgattttgggtaaccgggtgttaca 311  Q
     | ||||||||||||| ||| ||||||||||    
T  24514579 attaattgattttgggaaacggggtgttaca 24514609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 183 - 311
Target Start/End: Original strand, 14375968 - 14376093
Alignment:
Q  183 tgtttattaaatagtttttatattctatttaagaaaatt-gatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattat 281  Q
    |||||||||||||||||| |||| |||||||||||| || || ||| |||| |||||||||||||||||| ||||||||| || ||||||||||||||||    
T  14375968 tgtttattaaatagtttt-atatactatttaagaaattttgaatta-gtagggtgacatgcccgtttgggaattactctgatg-catgtttatttattat 14376064  T
Q  282 taaattgattttgggtaaccgggtgttaca 311  Q
    | ||||| ||||||||||| ||||||||||    
T  14376065 ttaattg-ttttgggtaacggggtgttaca 14376093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 183 - 311
Target Start/End: Original strand, 19589233 - 19589358
Alignment:
Q  183 tgtttattaaatagtttttatattctatttaagaaaatt-gatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattat 281  Q
    |||||||||||||||||| |||| |||||||||||| || || ||| ||||||||||||||||||||||| ||||||||| || ||||||||||||||||    
T  19589233 tgtttattaaatagtttt-atatactatttaagaaattttgaatta-gtagtgtgacatgcccgtttgggaattactctgatg-catgtttatttattat 19589329  T
Q  282 taaattgattttgggtaaccgggtgttaca 311  Q
    | ||||| ||||||| ||| ||||||||||    
T  19589330 ttaattg-ttttgggcaacggggtgttaca 19589358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 188 - 312
Target Start/End: Original strand, 14616922 - 14617045
Alignment:
Q  188 attaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaatt 287  Q
    |||||||| |||||||||||||||||||||| ||    ||||||||||||||||||||||||||  |||||||| ||  || |||| |||||||| ||||    
T  14616922 attaaataatttttatattctatttaagaaattttgaatatgtagtgtgacatgcccgtttgggatttactctgatg-aatatttaattattatttaatt 14617020  T
Q  288 gattttgggtaaccgggtgttacac 312  Q
    | ||||||||||| |||||||||||    
T  14617021 gcttttgggtaacggggtgttacac 14617045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 181 - 311
Target Start/End: Complemental strand, 22757789 - 22757660
Alignment:
Q  181 gatgttta-ttaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttatt 279  Q
    |||||||| |||||||| ||||||||||||||||||||| ||||  | |||||||||||||||||||||||| |||| || | ||| |||||||||| ||    
T  22757789 gatgtttagttaaatagattttatattctatttaagaaatttgaaat-tgtagtgtgacatgcccgtttgggaattattcagatgt-atgtttatttgtt 22757692  T
Q  280 attaaattgattttgggtaaccgggtgttaca 311  Q
    ||| |||||| |||| ||||| ||||||||||    
T  22757691 atttaattgaatttgagtaacggggtgttaca 22757660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 181 - 312
Target Start/End: Original strand, 8768817 - 8768948
Alignment:
Q  181 gatgtttattaaatag-tttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttatt 279  Q
    |||||||||||||||| |||||||||||||||||||||| ||     ||||||||||||||||| ||||| | |||||| || ||| || |||| |||||    
T  8768817 gatgtttattaaatagatttttatattctatttaagaaattttgaaaatgtagtgtgacatgcctgtttgagaattactttgatgt-atatttaattatt 8768915  T
Q  280 attaaattgattttgggtaaccgggtgttacac 312  Q
    ||| ||||| ||||||||||| |||||||||||    
T  8768916 atttaattgtttttgggtaacggggtgttacac 8768948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 188 - 312
Target Start/End: Complemental strand, 19448806 - 19448683
Alignment:
Q  188 attaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaatt 287  Q
    ||||||||||||||||||||||||||||||||||     | ||||| ||| |||||||||||||  |||||||  ||| ||||||| |||||||| ||||    
T  19448806 attaaatagtttttatattctatttaagaaaatttgaaaaagtagtctgatatgcccgtttgggatttactctaatgt-atgtttaattattatttaatt 19448708  T
Q  288 gattttgggtaaccgggtgttacac 312  Q
    | ||||||||||| |||||||||||    
T  19448707 gcttttgggtaacggggtgttacac 19448683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 188 - 312
Target Start/End: Complemental strand, 19450800 - 19450677
Alignment:
Q  188 attaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaatt 287  Q
    ||||||||||||||||||||||||||||||||||     | ||||| ||| |||||||||||||  |||||||  ||| ||||||| |||||||| ||||    
T  19450800 attaaatagtttttatattctatttaagaaaatttgaaaaagtagtctgatatgcccgtttgggatttactctaatgt-atgtttaattattatttaatt 19450702  T
Q  288 gattttgggtaaccgggtgttacac 312  Q
    | ||||||||||| |||||||||||    
T  19450701 gcttttgggtaacggggtgttacac 19450677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 185 - 312
Target Start/End: Original strand, 23235639 - 23235765
Alignment:
Q  185 tttattaaatagtttttatattctatttaagaaa-attgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattatta 283  Q
    ||||||||||| |||||||| |||||||||||||  |||| ||| | ||||||||||||||||||| | ||||||||| ||| ||||||| ||||||||     
T  23235639 tttattaaataatttttataatctatttaagaaattttgaatta-ggagtgtgacatgcccgtttgagaattactctgatgt-atgtttaattattattt 23235736  T
Q  284 aattgattttgggtaaccgggtgttacac 312  Q
    ||||  ||||||||||| |||||||||||    
T  23235737 aattacttttgggtaacggggtgttacac 23235765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 181 - 311
Target Start/End: Complemental strand, 19439230 - 19439102
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaatt-gatttatgtagtgtgacatgcccgtttggggattactctggtgtcatg-tttatttat 278  Q
    |||||||||||||||||||| ||||||||||||||||| || || ||| |||||||||||||||||||||||  |||||||| |||  ||  ||||| ||    
T  19439230 gatgtttattaaatagtttt-atattctatttaagaaattttgaatta-gtagtgtgacatgcccgtttgggatttactctgatgt--tgaattattaat 19439135  T
Q  279 tattaaattgattttgggtaaccgggtgttaca 311  Q
    |||||||||  ||||||||||| ||||||||||    
T  19439134 tattaaattacttttgggtaacggggtgttaca 19439102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 60 - 218
Target Start/End: Original strand, 19472867 - 19473026
Alignment:
Q  60 gattatggttttactttggtgaggcttttataccaagactgtt-attagagaatcacacattt-atgctgttgttattgatgatgaatattccgctgcaa 157  Q
    |||||||  |||| |||| |||||||||||| |||||||| || | | |||||||| |||||| ||| ||||||| || ||||  |||||||||||||||    
T  19472867 gattatgaatttattttgatgaggcttttatgccaagactatttagtggagaatcaaacatttgatgttgttgtttttaatgaa-aatattccgctgcaa 19472965  T
Q  158 agttt-gatgaaactattttggttgatgtttattaaatagtttttatattctatttaagaaa 218  Q
    ||||| ||||||| | |||  |||| |||||||||||||| |||||||||||||||||||||    
T  19472966 agttttgatgaaattgtttaagttgttgtttattaaatag-ttttatattctatttaagaaa 19473026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 188 - 309
Target Start/End: Original strand, 23236055 - 23236173
Alignment:
Q  188 attaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaatt 287  Q
    ||||||||||||||||||||||||||||||||||     |||||||||||||||||||||||||   ||||||| ||   ||||||||||||||| | ||    
T  23236055 attaaatagtttttatattctatttaagaaaatttgaaaatgtagtgtgacatgcccgtttgggatatactctgatg---tgtttatttattatttattt 23236151  T
Q  288 gattttgggtaaccgggtgtta 309  Q
    | ||| || |||| ||||||||    
T  23236152 gctttgggataacggggtgtta 23236173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 185 - 311
Target Start/End: Complemental strand, 7428852 - 7428732
Alignment:
Q  185 tttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaa 284  Q
    |||||||||||| ||||||||||||||| ||||| ||||   ||||||||||||||| ||||||||| ||||||||| || ||||    ||||||| | |    
T  7428852 tttattaaatagattttatattctattttagaaatttgaaa-atgtagtgtgacatgtccgtttgggaattactctgatg-catg----tttattaatca 7428759  T
Q  285 attgattttgggtaaccgggtgttaca 311  Q
    |||||||||||| ||| ||||||||||    
T  7428758 attgattttgggaaacggggtgttaca 7428732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 188 - 311
Target Start/End: Complemental strand, 19457187 - 19457065
Alignment:
Q  188 attaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaatt 287  Q
    ||||||||||||||||||||||||||||||||||     | ||||| ||| |||||||||| ||  |||||||  ||| |||||||  ||||||| ||||    
T  19457187 attaaatagtttttatattctatttaagaaaatttgaaaaagtagtctgatatgcccgttttggatttactctaatgt-atgtttaactattatttaatt 19457089  T
Q  288 gattttgggtaaccgggtgttaca 311  Q
    | ||||||||||| ||||||||||    
T  19457088 gcttttgggtaacggggtgttaca 19457065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 188 - 311
Target Start/End: Complemental strand, 19467332 - 19467210
Alignment:
Q  188 attaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaatt 287  Q
    ||||||||||||||||||||||||||||||||||     | ||||| ||| |||||||||| ||  |||||||  ||| |||||||  ||||||| ||||    
T  19467332 attaaatagtttttatattctatttaagaaaatttgaaaaagtagtctgatatgcccgttttggatttactctaatgt-atgtttaactattatttaatt 19467234  T
Q  288 gattttgggtaaccgggtgttaca 311  Q
    | ||||||||||| ||||||||||    
T  19467233 gcttttgggtaacggggtgttaca 19467210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 179 - 218
Target Start/End: Original strand, 18316683 - 18316722
Alignment:
Q  179 ttgatgtttattaaatagtttttatattctatttaagaaa 218  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  18316683 ttgatgtttattaaatagtttttatattctatttaagaaa 18316722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 227 - 311
Target Start/End: Complemental strand, 24561680 - 24561600
Alignment:
Q  227 atgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaattgattttgggtaaccgggtgttaca 311  Q
    |||||||||||||||||||||||||  |||||||| ||| |||||||   |||||| ||||| ||||||||||| ||||||||||    
T  24561680 atgtagtgtgacatgcccgtttgggatttactctgatgt-atgttta---attatttaattgtttttgggtaacggggtgttaca 24561600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 181 - 249
Target Start/End: Original strand, 8761080 - 8761149
Alignment:
Q  181 gatgtttattaaatag-tttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttg 249  Q
    |||||||||||||||| |||||||||||||||||||||| ||     |||||||||||||||||||||||    
T  8761080 gatgtttattaaatagatttttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttg 8761149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 185 - 311
Target Start/End: Original strand, 9623379 - 9623499
Alignment:
Q  185 tttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaa 284  Q
    |||| ||||||||||| ||||||||||||||||| ||     |||||||||||||||||||||| || ||||||||| || |||||||||| |||    |    
T  9623379 tttaataaatagtttt-atattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttaggaattactctgatg-catgtttattaatt----a 9623472  T
Q  285 attgattttgggtaaccgggtgttaca 311  Q
    ||| |||||||| ||| ||||||||||    
T  9623473 attaattttgggaaacggggtgttaca 9623499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 181 - 308
Target Start/End: Complemental strand, 19818422 - 19818296
Alignment:
Q  181 gatgtttatt-aaatagtttttatattctatttaagaaaatt-gatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttat 278  Q
    |||||||||| |||||||||| |||| |||||||||| |||| || ||| | |||||||||||||||||||||  |||||||| ||  || |||| ||||    
T  19818422 gatgtttatttaaatagtttt-atatgctatttaagagaatttgaatta-gaagtgtgacatgcccgtttgggatttactctgatga-atatttaattat 19818326  T
Q  279 tattaaattgattttgggtaaccgggtgtt 308  Q
    |||| ||||| ||||||||||| |||||||    
T  19818325 tatttaattgtttttgggtaacggggtgtt 19818296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 188 - 311
Target Start/End: Original strand, 21717572 - 21717695
Alignment:
Q  188 attaaatag-tttttatat--tctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaa 284  Q
    ||||||||| |||||||||  ||||||||||||||||||  | |||||||||||||||||||| |||  |||||||| |||  ||   | |||||||| |    
T  21717572 attaaatagatttttatatgttctatttaagaaaattgaaat-tgtagtgtgacatgcccgttggggttttactctgatgt--tgaaaaattattattta 21717668  T
Q  285 attgattttgggtaaccgggtgttaca 311  Q
    |||||||||||| ||| ||||||||||    
T  21717669 attgattttgggaaacggggtgttaca 21717695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 188 - 311
Target Start/End: Original strand, 21725408 - 21725531
Alignment:
Q  188 attaaatag-tttttatat--tctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaa 284  Q
    ||||||||| |||||||||  ||||||||||||||||||  | |||||||||||||||||||| |||  |||||||| |||  ||   | |||||||| |    
T  21725408 attaaatagatttttatatgttctatttaagaaaattgaaat-tgtagtgtgacatgcccgttggggttttactctgatgt--tgaaaaattattattta 21725504  T
Q  285 attgattttgggtaaccgggtgttaca 311  Q
    |||||||||||| ||| ||||||||||    
T  21725505 attgattttgggaaacggggtgttaca 21725531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 201 - 311
Target Start/End: Original strand, 5295282 - 5295389
Alignment:
Q  201 tatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaattgattttgggtaac 300  Q
    |||||||||||||||||| ||||  | |||||||||||||||||||||| |  |||||||| |||  ||   | |||||||| ||||||||||||| |||    
T  5295282 tatattctatttaagaaatttgaaat-tgtagtgtgacatgcccgtttgagttttactctgatgt--tgaacaattattatttaattgattttgggaaac 5295378  T
Q  301 cgggtgttaca 311  Q
     ||||||||||    
T  5295379 ggggtgttaca 5295389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 181 - 313
Target Start/End: Original strand, 21794124 - 21794254
Alignment:
Q  181 gatgtttattaaatag-tttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttatt 279  Q
    |||||||| ||||||| |||||||||||||||| ||||| ||||   ||||||||||||||||||| ||| |  |||||||| ||| |   ||| |||||    
T  21794124 gatgtttaataaatagatttttatattctattttagaaatttgaaa-atgtagtgtgacatgcccg-ttgcgttttactctgatgtta-aattaattatt 21794220  T
Q  280 attaaattgattttgggtaaccgggtgttacaca 313  Q
    ||| ||||  ||||||||||| ||||||||||||    
T  21794221 atttaattacttttgggtaacggggtgttacaca 21794254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 181 - 218
Target Start/End: Complemental strand, 23954836 - 23954799
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaa 218  Q
    |||||||||||||||| |||||||||||||||||||||    
T  23954836 gatgtttattaaatagattttatattctatttaagaaa 23954799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 143 - 249
Target Start/End: Complemental strand, 25395546 - 25395441
Alignment:
Q  143 aatattccgctgcaaagttt-gatgaaactattttggttgatgtttattaaatagtttttatattctatttaagaaa-attgatttatgtagtgtgacat 240  Q
    ||||||||||||||| |||| ||||||||| |||  |||| |||||||| ||||| ||||||| |||||||||||||  ||||   | ||||||||||||    
T  25395546 aatattccgctgcaaggttttgatgaaactgtttaagttgttgtttattgaatag-ttttataatctatttaagaaattttga--aaagtagtgtgacat 25395450  T
Q  241 gcccgtttg 249  Q
    |||||||||    
T  25395449 gcccgtttg 25395441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 181 - 250
Target Start/End: Original strand, 19787526 - 19787595
Alignment:
Q  181 gatgtttattaaatag-tttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttgg 250  Q
    |||||||| ||||||| |||||||||||||||| ||||| ||||   |||||||||||||||||| |||||    
T  19787526 gatgtttaataaatagatttttatattctattttagaaatttgaaa-atgtagtgtgacatgcccatttgg 19787595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 218
Target Start/End: Original strand, 8717845 - 8717881
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaa 218  Q
    |||||||||||||||||||| |||||||||||||||||    
T  8717845 gatgtttattaaatagtttt-atattctatttaagaaa 8717881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 218
Target Start/End: Complemental strand, 16804065 - 16804029
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaa 218  Q
    |||||||||||||||||||| |||||||||||||||||    
T  16804065 gatgtttattaaatagtttt-atattctatttaagaaa 16804029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 218
Target Start/End: Complemental strand, 16811910 - 16811874
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaa 218  Q
    |||||||||||||||||||| |||||||||||||||||    
T  16811910 gatgtttattaaatagtttt-atattctatttaagaaa 16811874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 218
Target Start/End: Complemental strand, 16828931 - 16828895
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaa 218  Q
    |||||||||||||||||||| |||||||||||||||||    
T  16828931 gatgtttattaaatagtttt-atattctatttaagaaa 16828895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 218
Target Start/End: Complemental strand, 29491853 - 29491817
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaa 218  Q
    |||||||||||||||||||| |||||||||||||||||    
T  29491853 gatgtttattaaatagtttt-atattctatttaagaaa 29491817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 181 - 250
Target Start/End: Complemental strand, 12166761 - 12166691
Alignment:
Q  181 gatgtttattaaatag--tttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttgg 250  Q
    |||||||| |||||||  |||||||||||||||| ||||| ||||   |||||||||||||||||| |||||    
T  12166761 gatgtttaataaatagattttttatattctatttcagaaatttgaaa-atgtagtgtgacatgcccatttgg 12166691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 201 - 261
Target Start/End: Complemental strand, 31249776 - 31249716
Alignment:
Q  201 tatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctg 261  Q
    |||||||||||||||||| ||   | ||||||||||||||||||||| |||  ||||||||    
T  31249776 tatattctatttaagaaattttgatgatgtagtgtgacatgcccgttggggttttactctg 31249716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 178 - 218
Target Start/End: Complemental strand, 35244041 - 35244002
Alignment:
Q  178 gttgatgtttattaaatagtttttatattctatttaagaaa 218  Q
    |||||||||||||||||||| ||| ||||||||||||||||    
T  35244041 gttgatgtttattaaatagtattt-tattctatttaagaaa 35244002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 78; Significance: 5e-36; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 181 - 312
Target Start/End: Original strand, 172461 - 172587
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttatta 280  Q
    |||||||||||||||| ||||||||||||||||||||   |||   ||||||||||||||||||||||||| ||||||||| || |||||||||||||||    
T  172461 gatgtttattaaatagattttatattctatttaagaa---tgaaa-atgtagtgtgacatgcccgtttgggaattactctgatg-catgtttatttatta 172555  T
Q  281 ttaaattgattttgggtaaccgggtgttacac 312  Q
    |||||||||||||||||||| |||||||||||    
T  172556 ttaaattgattttgggtaacggggtgttacac 172587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 75; Significance: 3e-34; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 181 - 311
Target Start/End: Complemental strand, 55444 - 55316
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttatta 280  Q
    |||||||||||||||| ||||||||||||||||||||| ||     ||||||||||||||||||||||||| ||||||||| || |||||||||||||||    
T  55444 gatgtttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctgatg-catgtttatttatta 55346  T
Q  281 ttaaattgattttgggtaaccgggtgttaca 311  Q
    ||||||||||||||| ||| |||||||||||    
T  55345 ttaaattgattttggataa-cgggtgttaca 55316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 75; Significance: 3e-34; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 181 - 311
Target Start/End: Original strand, 25036743 - 25036872
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttatta 280  Q
    |||||||||||||||| ||||||||||||||||||||| ||     ||||||||||||||||||||||||| ||||||||| || |||||||||||||||    
T  25036743 gatgtttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctgatg-catgtttatttatta 25036841  T
Q  281 ttaaattgattttgggtaaccgggtgttaca 311  Q
    |||||||||||||||| ||| |||| |||||    
T  25036842 ttaaattgattttgggaaacggggtattaca 25036872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 181 - 311
Target Start/End: Original strand, 25040850 - 25040979
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttatta 280  Q
    |||||||||||||||| ||||||||||||||||||||| ||     ||||||||||||||||||||||||| ||||||||| || |||||||||||||||    
T  25040850 gatgtttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctgatg-catgtttatttatta 25040948  T
Q  281 ttaaattgattttgggtaaccgggtgttaca 311  Q
    |||||||||||||||| ||| |||| |||||    
T  25040949 ttaaattgattttgggaaacggggtattaca 25040979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 181 - 311
Target Start/End: Complemental strand, 8688297 - 8688168
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttatta 280  Q
    |||| ||||||||||| |||||||||||||||||||||||| |   |||||||||||||| |||||||||| ||||||||| || |||||||||||||||    
T  8688297 gatgcttattaaatagattttatattctatttaagaaaatttaaaaatgtagtgtgacatacccgtttgggaattactctgatg-catgtttatttatta 8688199  T
Q  281 ttaaattgattttgggtaaccgggtgttaca 311  Q
     | ||||||||||||| ||| ||||||||||    
T  8688198 attaattgattttgggaaacggggtgttaca 8688168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 181 - 311
Target Start/End: Original strand, 23029685 - 23029814
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttatta 280  Q
    |||| ||||||||||| ||||||||||||||||||||||||     ||||||||||||||||||||||||| ||||||||| || |||||||||||||||    
T  23029685 gatgcttattaaatagattttatattctatttaagaaaatttgaaaatgtagtgtgacatgcccgtttgggaattactctgatg-catgtttatttatta 23029783  T
Q  281 ttaaattgattttgggtaaccgggtgttaca 311  Q
     | ||||||||||||| |||  |||||||||    
T  23029784 attaattgattttgggaaacgaggtgttaca 23029814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 172 - 311
Target Start/End: Complemental strand, 22809426 - 22809289
Alignment:
Q  172 attttggttgatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtt 271  Q
    |||||| | |||||||||||||||| ||||||||||||||||||||| ||     |||||||||||||||||||||||||  |||||||| ||| |   |    
T  22809426 attttgatggatgtttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggatttactctgatgtgaa--t 22809329  T
Q  272 tatttattattaaattgattttgggtaaccgggtgttaca 311  Q
    ||||||||| ||||||||||||||||||| ||||||||||    
T  22809328 tatttattactaaattgattttgggtaacggggtgttaca 22809289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 183 - 313
Target Start/End: Complemental strand, 24942922 - 24942793
Alignment:
Q  183 tgtttattaaatagtttttatattctatttaagaaaa-ttgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgttt-atttatta 280  Q
    |||| ||||||||||||| |||| ||||||||||||| |||| ||| |||||||||||||||||||||||  |||||||| ||| |||||| ||||||||    
T  24942922 tgttaattaaatagtttt-atatgctatttaagaaaaattgaatta-gtagtgtgacatgcccgtttgggatttactctgatgt-atgttttatttatta 24942826  T
Q  281 ttaaattgattttgggtaaccgggtgttacaca 313  Q
    |||||||||||||||||||| ||||||||||||    
T  24942825 ttaaattgattttgggtaacggggtgttacaca 24942793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 183 - 311
Target Start/End: Complemental strand, 20723554 - 20723429
Alignment:
Q  183 tgtttattaaatagtttttatattctatttaagaaaatt-gatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattat 281  Q
    |||||||||||||||||| |||| |||||||||||  || || ||| ||||||||||||||||||||||| ||||||||| || ||||||||||||||||    
T  20723554 tgtttattaaatagtttt-atatactatttaagaagttttgaatta-gtagtgtgacatgcccgtttgggaattactctgatg-catgtttatttattat 20723458  T
Q  282 taaattgattttgggtaaccgggtgttaca 311  Q
    | ||||| ||||||||||| ||||||||||    
T  20723457 ttaattg-ttttgggtaacggggtgttaca 20723429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 185 - 313
Target Start/End: Original strand, 28972016 - 28972143
Alignment:
Q  185 tttattaaatagtttttatattctatttaagaaaatt-gatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattatta 283  Q
    |||||||||||||||||||| ||||||||||||| || ||  || ||||||||||||||||||||||| ||||||||| ||| ||||||| ||||||||     
T  28972016 tttattaaatagtttttataatctatttaagaaattttgaaata-gtagtgtgacatgcccgtttgggaattactctgatgt-atgtttaattattattt 28972113  T
Q  284 aattgattttgggtaaccgggtgttacaca 313  Q
    ||||  ||||||||||| | ||||||||||    
T  28972114 aattacttttgggtaacggtgtgttacaca 28972143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 183 - 311
Target Start/End: Original strand, 19715463 - 19715589
Alignment:
Q  183 tgtttattaaatagtttttatattctatttaagaaaatt-gatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgt-ttatttatta 280  Q
    |||||| ||||||||||| ||||||||||||||||| || || ||| |||||||||||||||||||||||  |||||||| |||  ||  ||||||||||    
T  19715463 tgtttactaaatagtttt-atattctatttaagaaattttgaatta-gtagtgtgacatgcccgtttgggatttactctgatgt--tgaattatttatta 19715558  T
Q  281 ttaaattgattttgggtaaccgggtgttaca 311  Q
    |||||||||||||||||||| ||||||||||    
T  19715559 ttaaattgattttgggtaacagggtgttaca 19715589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 183 - 311
Target Start/End: Original strand, 19720026 - 19720152
Alignment:
Q  183 tgtttattaaatagtttttatattctatttaagaaaatt-gatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgt-ttatttatta 280  Q
    |||||| ||||||||||| ||||||||||||||||| || || ||| |||||||||||||||||||||||  |||||||| |||  ||  ||||||||||    
T  19720026 tgtttactaaatagtttt-atattctatttaagaaattttgaatta-gtagtgtgacatgcccgtttgggatttactctgatgt--tgaattatttatta 19720121  T
Q  281 ttaaattgattttgggtaaccgggtgttaca 311  Q
    |||||||||||||||||||| ||||||||||    
T  19720122 ttaaattgattttgggtaacagggtgttaca 19720152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 143 - 311
Target Start/End: Complemental strand, 22859852 - 22859688
Alignment:
Q  143 aatattccgctgcaaagtttgatgaaactattttggttgatgtttattaaatagtttttatattctatttaagaaa-attgatttatgtagtgtgacatg 241  Q
    ||||||||||||||||||||  ||||||| |||  |||| |||||||||||||| ||||||| |||||||||||||  ||||   | |||||||||||||    
T  22859852 aatattccgctgcaaagttttgtgaaactgtttaagttgttgtttattaaatag-ttttataatctatttaagaaattttga--aaagtagtgtgacatg 22859756  T
Q  242 cccgtttggggattactctggtgtcatgtttatttattattaaattgattttgggtaaccgggtgttaca 311  Q
    ||||||||||   ||||||| ||| ||| ||||||| |||| ||||| ||||||||||| ||||||||||    
T  22859755 cccgtttgggatatactctgatgt-atg-ttatttaatatttaattgtttttgggtaacggggtgttaca 22859688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 183 - 313
Target Start/End: Original strand, 19791930 - 19792058
Alignment:
Q  183 tgtttattaaatagtttttatattctatttaagaaaatt-gatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgt-ttatttatta 280  Q
    |||||| ||||||||||| ||||||||||||||||| || || ||| |||||||||||||||||||||||  ||| |||| |||  ||  ||||||||||    
T  19791930 tgtttactaaatagtttt-atattctatttaagaaattttgaatta-gtagtgtgacatgcccgtttgggatttagtctgatgt--tgaattatttatta 19792025  T
Q  281 ttaaattgattttgggtaaccgggtgttacaca 313  Q
    |||||||||||||||||||| ||||||||||||    
T  19792026 ttaaattgattttgggtaacggggtgttacaca 19792058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 79 - 311
Target Start/End: Original strand, 23672730 - 23672958
Alignment:
Q  79 tgaggcttttataccaagactgtt-attagagaatcacacattt-atgctgttgttattgatgatgaatattccgctgcaaagttt-gatgaaactattt 175  Q
    |||||||||||| ||||||||||| | | |||||||| |||||| ||| ||||||| || ||||  |||||| ||||||||||||| |||||||| ||||    
T  23672730 tgaggcttttatgccaagactgtttagtggagaatcaaacatttgatgttgttgtttttaatgaa-aatatttcgctgcaaagttttgatgaaacgattt 23672828  T
Q  176 tggttgatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccg-tttggggat-tactctggtgtcatgttta 273  Q
      |||| |||||||||||||  ||||||| ||||||||||||| ||  |  | ||||||||||||||||| ||||| ||| |||| ||     |||||||    
T  23672829 aagttgttgtttattaaata-attttataatctatttaagaaattt--tgaaagtagtgtgacatgcccgttttggtgatatactatg-----atgttta 23672920  T
Q  274 tttattattaaattgattttgggtaaccgggtgttaca 311  Q
    ||||||||||||||| ||| || |||| ||||||||||    
T  23672921 tttattattaaattgttttgggataacggggtgttaca 23672958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 201 - 311
Target Start/End: Complemental strand, 23297020 - 23296911
Alignment:
Q  201 tatattctatttaagaaaatt-gatttatgtagtgtgacatgcccgtttggggattactctggtgtcatg-tttatttattattaaattgattttgggta 298  Q
    ||||||| |||||||||| || || ||| |||||||||||||||||||||||  |||||||| |||  || |||||||||||||||||||||||||||||    
T  23297020 tatattccatttaagaaattttgaatta-gtagtgtgacatgcccgtttgggttttactctgatgt--tgatttatttattattaaattgattttgggta 23296924  T
Q  299 accgggtgttaca 311  Q
    || ||||||||||    
T  23296923 acggggtgttaca 23296911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 181 - 261
Target Start/End: Complemental strand, 24503722 - 24503642
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctg 261  Q
    |||||||||||||||| ||||||||||||||||||||| ||     ||||||||||||||||||||||||| |||||||||    
T  24503722 gatgtttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctg 24503642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 60 - 251
Target Start/End: Complemental strand, 24644436 - 24644246
Alignment:
Q  60 gattatggttttactttggtgaggcttttataccaagactgtt-attagagaatcacacattt-atgctgttgttattgatgatgaatattccgctgcaa 157  Q
    |||||||| |||| |||| ||||| |||||| ||||||||||| | | |||||||| |||||| ||| ||||||| || | ||  |||||||||||||||    
T  24644436 gattatggattta-tttgatgaggattttatgccaagactgtttagtggagaatcaaacatttgatgttgttgtttttaaagaa-aatattccgctgcaa 24644339  T
Q  158 agttt-gatgaaactattttggttgatgtttattaaatagtttttatattctatttaagaaa-attgatttatgtagtgtgacatgcccgtttggg 251  Q
    ||||| ||||||||| |||  |||| |||||||||||||| ||||||| |||||||||||||  ||||   | |||||||||||||||||||||||    
T  24644338 agttttgatgaaactgtttaagttgttgtttattaaatag-ttttataatctatttaagaaattttga--aaagtagtgtgacatgcccgtttggg 24644246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 188 - 311
Target Start/End: Complemental strand, 24651847 - 24651726
Alignment:
Q  188 attaaatagtttttatattctatttaagaaaatt-gatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaat 286  Q
    ||||||||||||| |||||||||||||||||||| || ||| |||||||||||||| ||||||||  |||||||| ||| |||  ||||||||| |||||    
T  24651847 attaaatagtttt-atattctatttaagaaaatttgaatta-gtagtgtgacatgcgcgtttgggatttactctgatgt-atgggtatttattaataaat 24651751  T
Q  287 tgattttgggtaaccgggtgttaca 311  Q
    || ||||||||||| |||| |||||    
T  24651750 tgtttttgggtaacggggtcttaca 24651726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 181 - 261
Target Start/End: Complemental strand, 31754978 - 31754898
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctg 261  Q
    |||||||||||||||| ||||||||||||||||||||| ||     ||||||||||||||||||||||||| |||||||||    
T  31754978 gatgtttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctg 31754898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 181 - 312
Target Start/End: Original strand, 20964653 - 20964781
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaa-attgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttatt 279  Q
    |||||||||||||||| |||||||||||||||||||||  ||||   ||||||||||||||||||||||||| ||||||||| || |||||   ||||||    
T  20964653 gatgtttattaaatagattttatattctatttaagaaatcttga-aaatgtagtgtgacatgcccgtttgggaattactctgatg-catgt---tttatt 20964747  T
Q  280 attaaattga-ttttgggtaaccgggtgttacac 312  Q
    | | |||||| ||||||| ||| |||||||||||    
T  20964748 aattaattgatttttgggaaacggggtgttacac 20964781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 181 - 261
Target Start/End: Complemental strand, 6031692 - 6031612
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctg 261  Q
    |||||||||||||||| ||||||||||||||||||||| ||     ||||||||||||||||||||| ||| |||||||||    
T  6031692 gatgtttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgttagggaattactctg 6031612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 229 - 309
Target Start/End: Complemental strand, 23290404 - 23290325
Alignment:
Q  229 gtagtgtgacatgcccgtttggggattactctggtgtcatg-tttatttattattaaattgattttgggtaaccgggtgtta 309  Q
    ||||||||||||||||||||| |  |||||||| ||  ||| ||||||||||||||||||||||||||||||| ||||||||    
T  23290404 gtagtgtgacatgcccgtttgagttttactctgatg--atgatttatttattattaaattgattttgggtaacggggtgtta 23290325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 188 - 311
Target Start/End: Original strand, 19655078 - 19655196
Alignment:
Q  188 attaaatagtttttatattctatttaagaaaa-ttgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaat 286  Q
    ||||||||||||| |||||||||| ||||||| ||||   ||||||||||||||||||||| |||  |||||||| ||| |||||||   |||||| |||    
T  19655078 attaaatagtttt-atattctattgaagaaaaattgaaa-atgtagtgtgacatgcccgttggggatttactctgatgt-atgttta---attatttaat 19655171  T
Q  287 tgattttgggtaaccgggtgttaca 311  Q
    || ||||||||||| ||||||||||    
T  19655172 tgtttttgggtaacggggtgttaca 19655196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 198 - 311
Target Start/End: Original strand, 22797343 - 22797453
Alignment:
Q  198 ttttatattctatttaagaaaa-ttgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaattgattttggg 296  Q
    |||||||||||||||||||||| ||||    ||||||||||||||||||||||||  |||||||| ||| ||| ||| |||||||| |||| ||||||||    
T  22797343 ttttatattctatttaagaaaaattgaacc-tgtagtgtgacatgcccgtttgggatttactctgatgt-atg-ttaattattatttaatt-attttggg 22797438  T
Q  297 taaccgggtgttaca 311  Q
    |||| ||||||||||    
T  22797439 taacggggtgttaca 22797453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 181 - 251
Target Start/End: Original strand, 25108124 - 25108194
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggg 251  Q
    ||||||||||||||||||||||||||| |||||||||| ||     |||||||||||||||||||| ||||    
T  25108124 gatgtttattaaatagtttttatattcaatttaagaaattttgaaaatgtagtgtgacatgcccgtgtggg 25108194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 181 - 261
Target Start/End: Complemental strand, 19796027 - 19795948
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctg 261  Q
    |||||||||||||||||| | ||||||||||||||||||||     | |||||||||||||||||||||||  ||||||||    
T  19796027 gatgtttattaaatagttct-atattctatttaagaaaattttgaaaagtagtgtgacatgcccgtttgggatttactctg 19795948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 181 - 251
Target Start/End: Original strand, 25590822 - 25590893
Alignment:
Q  181 gatgtttattaaatag-tttttatattctatttaagaaaatt-gatttatgtagtgtgacatgcccgtttggg 251  Q
    |||||||| ||||||| |||||||||||||||||||||| || ||| || |||||||||||||||||||||||    
T  25590822 gatgtttaataaatagatttttatattctatttaagaaattttgatata-gtagtgtgacatgcccgtttggg 25590893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 181 - 312
Target Start/End: Complemental strand, 43692840 - 43692711
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaa--ttgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatg-tttattta 277  Q
    |||||||||||||||||||| ||||||||||||||||||  ||||   ||||||||||||||||||| |||||  |||||||| |||  ||  ||| |||    
T  43692840 gatgtttattaaatagtttt-atattctatttaagaaaaatttga-aaatgtagtgtgacatgcccg-ttgggttttactctgatgt--tgaattaatta 43692746  T
Q  278 ttattaaattgattttgggtaaccgggtgttacac 312  Q
    ||||| ||||  ||||||||||| |||||||||||    
T  43692745 ttatttaattacttttgggtaacggggtgttacac 43692711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 181 - 251
Target Start/End: Complemental strand, 23062016 - 23061947
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaat-tgatttatgtagtgtgacatgcccgtttggg 251  Q
    |||||||||||||||||||| ||||||||||||||||| | |||   |||||||||||||||||||||||||    
T  23062016 gatgtttattaaatagtttt-atattctatttaagaaattatga-aaatgtagtgtgacatgcccgtttggg 23061947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 181 - 247
Target Start/End: Original strand, 27368261 - 27368327
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaa-ttgatttatgtagtgtgacatgcccgtt 247  Q
    |||||||||||||||||||| |||||||||||||||||| || |   |||||||||||||||||||||    
T  27368261 gatgtttattaaatagtttt-atattctatttaagaaaaatttaaaaatgtagtgtgacatgcccgtt 27368327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 311
Target Start/End: Complemental strand, 200039 - 199959
Alignment:
Q  227 atgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaattgattttgggtaaccgggtgttaca 311  Q
    |||||||||||||||||||||||||  |||||||| ||| ||||   ||||||||| ||||  ||||||||||| ||||||||||    
T  200039 atgtagtgtgacatgcccgtttgggatttactctgatgt-atgt---tttattatttaattacttttgggtaacggggtgttaca 199959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 311
Target Start/End: Original strand, 6745103 - 6745183
Alignment:
Q  227 atgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaattgattttgggtaaccgggtgttaca 311  Q
    |||||||||||||||||||||||||  |||||||| ||| |||||||   |||||| ||||  ||||||||||| ||||||||||    
T  6745103 atgtagtgtgacatgcccgtttgggatttactctgatgt-atgttta---attatttaattacttttgggtaacggggtgttaca 6745183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 311
Target Start/End: Original strand, 17967051 - 17967131
Alignment:
Q  227 atgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaattgattttgggtaaccgggtgttaca 311  Q
    |||||||||||||||||||||||||  |||||||| ||| |||||||   |||||| ||||  ||||||||||| ||||||||||    
T  17967051 atgtagtgtgacatgcccgtttgggatttactctgatgt-atgttta---attatttaattacttttgggtaacggggtgttaca 17967131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 25266817 - 25266752
Alignment:
Q  184 gtttattaaatagtttttatattctatttaagaaaa-ttgatttatgtagtgtgacatgcccgtttggg 251  Q
    ||||||||||||||||| |||||||||||||||||| ||||   | |||||||||||||||||||||||    
T  25266817 gtttattaaatagtttt-atattctatttaagaaaatttga--aaagtagtgtgacatgcccgtttggg 25266752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 251
Target Start/End: Original strand, 8890631 - 8890699
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggg 251  Q
    |||||||||||||||||||  ||||||||||||||||||||     | |||| ||||||||||||||||||    
T  8890631 gatgtttattaaatagttt--atattctatttaagaaaattttgaaaagtagcgtgacatgcccgtttggg 8890699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 143 - 217
Target Start/End: Complemental strand, 17633334 - 17633260
Alignment:
Q  143 aatattccgctgcaaagttt-gatgaaactattttggttgatgtttattaaatagtttttatattctatttaagaa 217  Q
    ||||||||||||||| |||| | |||||||| |   |||||||||||||||||||| ||| |||||||||||||||    
T  17633334 aatattccgctgcaaggttttggtgaaactaataaagttgatgtttattaaatagtgttt-tattctatttaagaa 17633260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 181 - 251
Target Start/End: Original strand, 38932216 - 38932284
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggg 251  Q
    |||||||| | ||||||||| ||||||||||||||||||||  |  |||||||||||||||| ||||||||    
T  38932216 gatgtttactgaatagtttt-atattctatttaagaaaatt-ttaaatgtagtgtgacatgctcgtttggg 38932284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 178 - 218
Target Start/End: Original strand, 21124607 - 21124646
Alignment:
Q  178 gttgatgtttattaaatagtttttatattctatttaagaaa 218  Q
    |||||||||||||||||||| ||| ||||||||||||||||    
T  21124607 gttgatgtttattaaatagtattt-tattctatttaagaaa 21124646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 201 - 261
Target Start/End: Complemental strand, 26883635 - 26883575
Alignment:
Q  201 tatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctg 261  Q
    |||||||||||||||||| ||   | | |||||||||||||||||||||||  ||||||||    
T  26883635 tatattctatttaagaaattttgatgacgtagtgtgacatgcccgtttgggttttactctg 26883575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 181 - 311
Target Start/End: Complemental strand, 16471 - 16341
Alignment:
Q  181 gatgtttattaaatag-tttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttatt 279  Q
    |||||||||||||||| |||||||||||||||||||||| ||     |||||||||||||||| |||||||| ||||||||| || |||||||| |||||    
T  16471 gatgtttattaaatagatttttatattctatttaagaaattttgaaaatgtagtgtgacatgcgcgtttgggaattactctgatg-catgtttagttatt 16373  T
Q  280 attaaattgattttgggtaaccgggtgttaca 311  Q
    ||||||||||||||||||||| ||||||||||    
T  16372 attaaattgattttgggtaacggggtgttaca 16341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679 (Bit Score: 67; Significance: 2e-29; HSPs: 2)
Name: scaffold0679
Description:

Target: scaffold0679; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 181 - 311
Target Start/End: Original strand, 3762 - 3891
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttatta 280  Q
    |||| ||||||||||| ||||||||||||||||||||||||     ||||||||||||||||||||||||| ||||||||| || |||||||| ||||||    
T  3762 gatgcttattaaatagattttatattctatttaagaaaatttgaaaatgtagtgtgacatgcccgtttgggaattactctgatg-catgtttaattatta 3860  T
Q  281 ttaaattgattttgggtaaccgggtgttaca 311  Q
     | ||||||||||||| ||| ||||||||||    
T  3861 attaattgattttgggaaacggggtgttaca 3891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 311
Target Start/End: Original strand, 1 - 67
Alignment:
Q  244 cgtttggggattactctggtgtcatgtttatttattattaaattgattttgggtaaccgggtgttaca 311  Q
    |||||||| ||||||||| || |||||||| |||||| | ||||||||||||| ||| ||||||||||    
T  1 cgtttgggaattactctgatg-catgtttaattattaattaattgattttgggaaacggggtgttaca 67  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 67; Significance: 2e-29; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 181 - 311
Target Start/End: Complemental strand, 1396 - 1267
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttatta 280  Q
    |||||||||||||||| ||||||||||||||| |||   ||     ||||||||||||||||||||||||| ||||||||| || |||||||||||||||    
T  1396 gatgtttattaaatagattttatattctattttagattttttgaaaatgtagtgtgacatgcccgtttgggaattactctgatg-catgtttatttatta 1298  T
Q  281 ttaaattgattttgggtaaccgggtgttaca 311  Q
    |||||||||||||||| ||| ||||||||||    
T  1297 ttaaattgattttgggaaacggggtgttaca 1267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 67; Significance: 2e-29; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 143 - 311
Target Start/End: Complemental strand, 320630 - 320465
Alignment:
Q  143 aatattccgctgcaaagtttgatgaaactattttggttgatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgc 242  Q
    |||||||||||||||||||  |||||   ||||||  || |||||||||||||| ||||  |||||||||| |||| |||    ||||||||||||||||    
T  320630 aatattccgctgcaaagtta-atgaag--attttgaatgttgtttattaaatagatttttcattctatttatgaaatttggaaaatgtagtgtgacatgc 320534  T
Q  243 ccgtttggggattactctggtgtcatgtttatttattattaaattga-ttttgggtaaccgggtgttaca 311  Q
    ||||||||| ||||||||| || |||||||||||||||||||||||| ||||||||||| ||||||||||    
T  320533 ccgtttgggaattactctgatg-catgtttatttattattaaattgatttttgggtaacggggtgttaca 320465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 60 - 311
Target Start/End: Original strand, 130238 - 130485
Alignment:
Q  60 gattatggttttactttggtgaggcttttataccaagactg-ttattagagaatcacacattt-atgctgttgttattgatgatgaatattccgctgcaa 157  Q
    |||||||| |||| |||| |||||||||||| ||||||||| ||| | |||||||| |||||| ||| ||||||| || ||||  |||||||||||||||    
T  130238 gattatggatttattttgatgaggcttttatgccaagactgtttagtggagaatcaaacatttgatgttgttgtttttaatga-aaatattccgctgcaa 130336  T
Q  158 ag-tttgatgaaactattttggttgatgtttattaaatagtttttatattctatttaagaaa-attgatttatgtagtgtgacatgcccgtttggggat- 254  Q
    || |||||||||||| |||  |||| |||||||||||||| |||||||||| |||||||||| |||||   | ||||||||||||||||| ||||||||     
T  130337 agttttgatgaaactgtttaagttgttgtttattaaatag-ttttatattccatttaagaaatattga--aaagtagtgtgacatgcccg-ttggggata 130432  T
Q  255 tactctggtgtcatgtttatttattattaaattgattttgggtaaccgggtgttaca 311  Q
    ||||||| |||     |||||||||||| ||||| ||| || |||| ||||||||||    
T  130433 tactctgatgt----attatttattatttaattgctttgggataacagggtgttaca 130485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 227 - 311
Target Start/End: Complemental strand, 326258 - 326174
Alignment:
Q  227 atgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaattga-ttttgggtaaccgggtgttaca 311  Q
    ||||||||||||||||||||||||| ||||||||| || |||||||||||||||||||||||| ||||||||||| ||||||||||    
T  326258 atgtagtgtgacatgcccgtttgggaattactctgatg-catgtttatttattattaaattgatttttgggtaacggggtgttaca 326174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 65; Significance: 3e-28; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 183 - 313
Target Start/End: Original strand, 3976 - 4105
Alignment:
Q  183 tgtttattaaatagtttttatattctatttaagaaaa-ttgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgttt-atttatta 280  Q
    |||| ||||||||||||| |||| ||||||||||||| |||| ||| |||||||||||||||||||||||  |||||||| ||| |||||| ||||||||    
T  3976 tgttaattaaatagtttt-atatactatttaagaaaaattgaatta-gtagtgtgacatgcccgtttgggatttactctgatgt-atgttttatttatta 4072  T
Q  281 ttaaattgattttgggtaaccgggtgttacaca 313  Q
    |||||||||||||||||||| ||||||||||||    
T  4073 ttaaattgattttgggtaacggggtgttacaca 4105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 65; Significance: 3e-28; HSPs: 4)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 181 - 312
Target Start/End: Original strand, 125120 - 125251
Alignment:
Q  181 gatgtttattaaatag-tttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttatt 279  Q
    |||||||||||||||| |||||||||||||||||||||| ||     ||||||||||||||||||||||||| ||||||||| ||| ||||||| |||||    
T  125120 gatgtttattaaatagatttttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctgatgt-atgtttaattatt 125218  T
Q  280 attaaattgattttgggtaaccgggtgttacac 312  Q
    ||| ||||| |||||||||||  ||||||||||    
T  125219 atttaattgcttttgggtaacgaggtgttacac 125251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 143 - 223
Target Start/End: Complemental strand, 24188 - 24109
Alignment:
Q  143 aatattccgctgcaaag-tttgatgaaactattttggttgatgtttattaaatagtttttatattctatttaagaaaattga 223  Q
    ||||||||||||||||| |||| |||||||| ||  |||||| ||||||||||||| ||| |||||||||||||||| ||||    
T  24188 aatattccgctgcaaagttttggtgaaactaattaagttgat-tttattaaatagtattt-tattctatttaagaaatttga 24109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 143 - 223
Target Start/End: Complemental strand, 53080 - 53001
Alignment:
Q  143 aatattccgctgcaaag-tttgatgaaactattttggttgatgtttattaaatagtttttatattctatttaagaaaattga 223  Q
    ||||||||||||||||| |||| |||||||| ||  |||||| |||||||| |||| ||| |||||||||||||||| ||||    
T  53080 aatattccgctgcaaagttttggtgaaactaattaagttgat-tttattaattagtattt-tattctatttaagaaatttga 53001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #4
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 143 - 218
Target Start/End: Complemental strand, 117591 - 117516
Alignment:
Q  143 aatattccgctgcaaagttt-gatgaaactattttggttgatgtttattaaatagtttttatattctatttaagaaa 218  Q
    ||||||||||||||| |||| | |||||||| |   ||||||||||||||||||| | || ||||||||||||||||    
T  117591 aatattccgctgcaaggttttggtgaaactaataaagttgatgtttattaaatag-tattctattctatttaagaaa 117516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 65; Significance: 3e-28; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 188 - 311
Target Start/End: Original strand, 38248 - 38369
Alignment:
Q  188 attaaatagtttttatattctatttaagaaaatt-gatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaat 286  Q
    ||||||||||||| |||| ||||||||||||||| || ||| |||||||||||||||||||||||  |||||||| ||| ||||||||||||||||||||    
T  38248 attaaatagtttt-atatgctatttaagaaaatttgaatta-gtagtgtgacatgcccgtttgggatttactctgatgt-atgtttatttattattaaat 38344  T
Q  287 tgattttgggtaaccgggtgttaca 311  Q
    || ||||||||||| ||||||||||    
T  38345 tgtttttgggtaacggggtgttaca 38369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 181 - 311
Target Start/End: Original strand, 6551 - 6681
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttatta 280  Q
    |||||||||||||||| ||||||||||||||||||||| ||     ||||| |||||||| |||||||||| ||||||||| ||| ||||||||||||||    
T  6551 gatgtttattaaatagattttatattctatttaagaaattttgaaaatgtaatgtgacatacccgtttgggaattactctgatgt-atgtttatttatta 6649  T
Q  281 ttaaattga-ttttgggtaaccgggtgttaca 311  Q
    || |||||| ||||||||||| ||||||||||    
T  6650 tttaattgatttttgggtaacggggtgttaca 6681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 181 - 311
Target Start/End: Complemental strand, 37333 - 37204
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaa-ttgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttatt 279  Q
    |||| ||||||||||| |||||||||||||||||||||| ||||   |||||||||||||| |||||||||| ||||||||| || ||||||||||||||    
T  37333 gatgcttattaaatagattttatattctatttaagaaaacttgaaa-atgtagtgtgacatacccgtttgggaattactctgatg-catgtttatttatt 37236  T
Q  280 attaaattgattttgggtaaccgggtgttaca 311  Q
    | | ||||||||||||| ||| ||||||||||    
T  37235 aattaattgattttgggaaacggggtgttaca 37204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 63; Significance: 4e-27; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 181 - 311
Target Start/End: Complemental strand, 8334 - 8206
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttatta 280  Q
    |||||||||||||||| ||||||||||||||||| ||| ||     ||||||||||||||||||||||||| |||| |||  || |||||||||||||||    
T  8334 gatgtttattaaatagattttatattctatttaataaattttgaaaatgtagtgtgacatgcccgtttgggaattaatctaatg-catgtttatttatta 8236  T
Q  281 ttaaattgattttgggtaaccgggtgttaca 311  Q
    |||||||||||||||| || |||||||||||    
T  8235 ttaaattgattttggg-aaacgggtgttaca 8206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 63; Significance: 4e-27; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 181 - 311
Target Start/End: Complemental strand, 136905 - 136777
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttatta 280  Q
    |||||||||||||||| ||||||||||||||||||||| ||     ||||||||||||||||| ||||||| ||||||||| || ||||||||||| |||    
T  136905 gatgtttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgcc-gtttgggaattactctgatg-catgtttatttttta 136808  T
Q  281 ttaaattgattttgggtaaccgggtgttaca 311  Q
    |||||||||||||||  ||| ||||||||||    
T  136807 ttaaattgattttggaaaacggggtgttaca 136777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 201 - 311
Target Start/End: Complemental strand, 194609 - 194502
Alignment:
Q  201 tatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaattgattttgggtaac 300  Q
    |||||||||||||||||| ||||  | |||||||||||||||||||| |||  |||||||| |||  ||   | |||||||| ||||||||||||| |||    
T  194609 tatattctatttaagaaatttgaaat-tgtagtgtgacatgcccgttggggttttactctgatgt--tgaaaaattattatttaattgattttgggaaac 194513  T
Q  301 cgggtgttaca 311  Q
     ||||||||||    
T  194512 ggggtgttaca 194502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 61; Significance: 6e-26; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 227 - 311
Target Start/End: Original strand, 10451 - 10534
Alignment:
Q  227 atgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaattgattttgggtaaccgggtgttaca 311  Q
    ||||||||||||||||||||||||| ||||||||| || ||||||||||||||||||||||||||||||| ||| ||||||||||    
T  10451 atgtagtgtgacatgcccgtttgggaattactctgatg-catgtttatttattattaaattgattttgggaaacggggtgttaca 10534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 61; Significance: 6e-26; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 188 - 311
Target Start/End: Complemental strand, 369936 - 369815
Alignment:
Q  188 attaaatagtttttatattctatttaagaaaatt-gatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaat 286  Q
    ||||||||||||| |||| ||||||||||||||| || ||| |||||||||||||||||||||||  ||| |||| ||| ||||||||||||||||||||    
T  369936 attaaatagtttt-atatgctatttaagaaaatttgaatta-gtagtgtgacatgcccgtttgggatttattctgatgt-atgtttatttattattaaat 369840  T
Q  287 tgattttgggtaaccgggtgttaca 311  Q
    || ||||||||||| ||||||||||    
T  369839 tgtttttgggtaacggggtgttaca 369815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 59; Significance: 1e-24; HSPs: 2)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 185 - 311
Target Start/End: Complemental strand, 33658 - 33533
Alignment:
Q  185 tttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaa 284  Q
    |||||||||||| ||||||||||||||||||||| ||     ||||||||||||||| ||||||||| ||||||||| || ||||||||||||||| | |    
T  33658 tttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgtccgtttgggaattactctgatg-catgtttatttattaatta 33560  T
Q  285 attgattttgggtaaccgggtgttaca 311  Q
    |||||||||||| ||| | ||||||||    
T  33559 attgattttgggaaacggagtgttaca 33533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 227 - 311
Target Start/End: Complemental strand, 26813 - 26730
Alignment:
Q  227 atgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaattgattttgggtaaccgggtgttaca 311  Q
    ||||||||||||||||||||||||| ||||||||| || ||||||||||||||| | ||||||||||||| ||| ||||||||||    
T  26813 atgtagtgtgacatgcccgtttgggaattactctgatg-catgtttatttattaattaattgattttgggaaacggggtgttaca 26730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 183 - 311
Target Start/End: Complemental strand, 27383 - 27258
Alignment:
Q  183 tgtttattaaatagtttttatattctatttaagaaaatt-gatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattat 281  Q
    |||||||||||||||||| |||| |||||||||||  || || ||| ||||||||||||||||||||||| ||||||||| || ||||||||||||||||    
T  27383 tgtttattaaatagtttt-atatactatttaagaagttttgaatta-gtagtgtgacatgcccgtttgggaattactctgatg-catgtttatttattat 27287  T
Q  282 taaattgattttgggtaaccgggtgttaca 311  Q
    | ||||| ||||||||||| ||||||||||    
T  27286 ttaattg-ttttgggtaacggggtgttaca 27258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0323 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0323
Description:

Target: scaffold0323; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 181 - 312
Target Start/End: Complemental strand, 6786 - 6655
Alignment:
Q  181 gatgtttattaaatag-tttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttatt 279  Q
    |||||||||||||||| |||||| ||||||||||||| | ||     || ||||||||| | |||||||||| ||||||||| ||| |||||||||||||    
T  6786 gatgtttattaaatagatttttacattctatttaagacattttgaaaatatagtgtgacgtacccgtttgggaattactctgatgt-atgtttatttatt 6688  T
Q  280 attaaattgattttgggtaaccgggtgttacac 312  Q
    ||||||||||||||||||||| || ||||||||    
T  6687 attaaattgattttgggtaacgggatgttacac 6655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 227 - 311
Target Start/End: Original strand, 14108 - 14191
Alignment:
Q  227 atgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaattgattttgggtaaccgggtgttaca 311  Q
    ||||||||||||||||||||||||| ||||||||| |||  ||||||||||||||||||||| |||||||||| |||||||||||    
T  14108 atgtagtgtgacatgcccgtttgggaattactctgatgtattgtttatttattattaaattgtttttgggtaa-cgggtgttaca 14191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1615 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold1615
Description:

Target: scaffold1615; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 181 - 311
Target Start/End: Original strand, 1066 - 1195
Alignment:
Q  181 gatgtttatt-aaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttatt 279  Q
    |||||||||| |||||||||| ||||||||||||||||||||     ||||||||||||||||||||||||| ||||||||| || ||||||| ||||||    
T  1066 gatgtttatttaaatagtttt-atattctatttaagaaaatttgaaaatgtagtgtgacatgcccgtttgggaattactctgatg-catgtttgtttatt 1163  T
Q  280 attaaattgattttgggtaaccgggtgttaca 311  Q
    | | ||| ||||||||| ||| ||||||||||    
T  1164 aattaatagattttgggaaacggggtgttaca 1195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 56; Significance: 6e-23; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 181 - 311
Target Start/End: Original strand, 7374 - 7503
Alignment:
Q  181 gatgtttatt-aaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttatt 279  Q
    |||||||||| |||||||||| ||||||||||||||||||||     |||||||| |||||||||||||||| ||||||||| || ||||||| ||||||    
T  7374 gatgtttatttaaatagtttt-atattctatttaagaaaatttgaaaatgtagtgcgacatgcccgtttgggaattactctgatg-catgtttgtttatt 7471  T
Q  280 attaaattgattttgggtaaccgggtgttaca 311  Q
    | | ||||||||||||| ||| ||||||||||    
T  7472 aattaattgattttgggaaacggggtgttaca 7503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 181 - 311
Target Start/End: Original strand, 17588 - 17717
Alignment:
Q  181 gatgtttatt-aaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttatt 279  Q
    |||||||||| |||||||||| ||||||||||||||||||||     |||||||| |||||||||||||||| ||||||||| || ||||||| ||||||    
T  17588 gatgtttatttaaatagtttt-atattctatttaagaaaatttgaaaatgtagtgcgacatgcccgtttgggaattactctgatg-catgtttgtttatt 17685  T
Q  280 attaaattgattttgggtaaccgggtgttaca 311  Q
    | | ||||||||||||| ||| ||||||||||    
T  17686 aattaattgattttgggaaacggggtgttaca 17717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 55; Significance: 2e-22; HSPs: 4)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 181 - 311
Target Start/End: Complemental strand, 16015 - 15887
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttatta 280  Q
    |||| ||||||||||| ||||||||||||||||||||||||     ||| |||||||||||||||||||||  |||||||| ||| ||| |||| |||||    
T  16015 gatgattattaaatagattttatattctatttaagaaaatttgaaaatgaagtgtgacatgcccgtttgggatttactctgatgt-atgattatctatta 15917  T
Q  281 ttaaattgattttgggtaaccgggtgttaca 311  Q
    || ||||| ||||||||||| ||||||||||    
T  15916 tttaattg-ttttgggtaacggggtgttaca 15887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 181 - 261
Target Start/End: Complemental strand, 33946 - 33866
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctg 261  Q
    |||||||||||||||||||||||||||||||||||||| ||     ||||||||||||||||||||||||| |||||||||    
T  33946 gatgtttattaaatagtttttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctg 33866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 181 - 311
Target Start/End: Complemental strand, 23519 - 23391
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttatta 280  Q
    |||| ||||||||||| ||||||||||||||||||||||||     ||| ||||||||||||| |||||||  |||||||| ||| ||| |||| |||||    
T  23519 gatgattattaaatagattttatattctatttaagaaaatttgaaaatgaagtgtgacatgcctgtttgggatttactctgatgt-atgattatctatta 23421  T
Q  281 ttaaattgattttgggtaaccgggtgttaca 311  Q
    || ||||| |||||||||||  |||||||||    
T  23420 tttaattg-ttttgggtaacttggtgttaca 23391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 143 - 218
Target Start/End: Original strand, 41103 - 41178
Alignment:
Q  143 aatattccgctgcaaagttt-gatgaaactattttggttgatgtttattaaatagtttttatattctatttaagaaa 218  Q
    ||||||||||||||| |||| | |||||||| |   ||||||||||||||||||| |||||||||||||||||||||    
T  41103 aatattccgctgcaaggttttggtgaaactaataaagttgatgtttattaaatag-ttttatattctatttaagaaa 41178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 185 - 311
Target Start/End: Original strand, 198 - 323
Alignment:
Q  185 tttattaaatagtttttatattctatttaagaaaatt-gatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattatta 283  Q
    ||||||||||||||| |||| ||||||||||||| || ||  || ||||||||||||||||||||||| ||||||||| ||| ||||||| ||||||||     
T  198 tttattaaatagtttatataatctatttaagaaattttgaaata-gtagtgtgacatgcccgtttgggaattactctgatgt-atgtttaattattattt 295  T
Q  284 aattgattttgggtaaccgggtgttaca 311  Q
    ||||  ||||||||||| |||| |||||    
T  296 aattacttttgggtaacggggtattaca 323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 188 - 311
Target Start/End: Complemental strand, 6112 - 5989
Alignment:
Q  188 attaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaatt 287  Q
    |||||||||||||||||||||||||||||||||| |   | | ||||||||||||||||| |||  |||||||| |   ||||||  |||||||| ||||    
T  6112 attaaatagtttttatattctatttaagaaaatttaaaaaagaagtgtgacatgcccgttagggatttactctgattgtatgtttcattattatttaatt 6013  T
Q  288 gattttgggtaaccgggtgttaca 311  Q
    | ||||||||||| ||||||||||    
T  6012 gtttttgggtaacggggtgttaca 5989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 51; Significance: 6e-20; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 183 - 311
Target Start/End: Complemental strand, 37924 - 37798
Alignment:
Q  183 tgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgt-ttatttattat 281  Q
    |||||||||||||||||| || |||||||||||||||||     | ||||||||||||| |||||||||  |||||||| ||  |||  |||||||||||    
T  37924 tgtttattaaatagtttt-atgttctatttaagaaaattttaaaaagtagtgtgacatgtccgtttgggatttactctgatg--atgaattatttattat 37828  T
Q  282 taaattgattttgggtaaccgggtgttaca 311  Q
    ||||||||||||||||||| ||||||||||    
T  37827 taaattgattttgggtaacggggtgttaca 37798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 181 - 311
Target Start/End: Original strand, 17527 - 17660
Alignment:
Q  181 gatgtttattaaatag---tttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggatt-actctggtgtcatg-tttatt 275  Q
    ||||||||||||||||   |||||||||||||||||||||||||     |||||| ||||||||||||||||||  || |||||| ||| ||| ||||||    
T  17527 gatgtttattaaatagagttttttatattctatttaagaaaatttgaaaatgtagcgtgacatgcccgtttgggattttactctgatgt-atgatttatt 17625  T
Q  276 tattattaaattgattttgggtaaccgggtgttaca 311  Q
    ||||||||| ||||||||||||||| ||||||||||    
T  17626 tattattaa-ttgattttgggtaacggggtgttaca 17660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 50; Significance: 2e-19; HSPs: 3)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 197 - 311
Target Start/End: Complemental strand, 39192 - 39079
Alignment:
Q  197 tttttatattctatttaagaaaatt-gatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgttta-tttattattaaattgattttg 294  Q
    |||||||||||||||||||||| || || ||| |||||||||||||||||||||||  |||||||  ||  ||| ||| |||||||||||||||||||||    
T  39192 tttttatattctatttaagaaattttgaatta-gtagtgtgacatgcccgtttgggatttactctaatg--atgattaatttattattaaattgattttg 39096  T
Q  295 ggtaaccgggtgttaca 311  Q
    |||||| ||||||||||    
T  39095 ggtaacggggtgttaca 39079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 181 - 311
Target Start/End: Original strand, 12298 - 12423
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaa-attgatttatgtagtgtgacatgcccgtttggggat-tactctggtgtcatgtttatttat 278  Q
    |||||||||||||||||||| |||||||||||||||||  ||||   | | | |||||||||||||||||| ||| ||||||| |||     ||||||||    
T  12298 gatgtttattaaatagtttt-atattctatttaagaaattttga--aaagcaatgtgacatgcccgtttggtgatatactctgatgt----attatttat 12390  T
Q  279 tattaaattgattttgggtaaccgggtgttaca 311  Q
    |||| ||||||||| || |||| ||||||||||    
T  12391 tatttaattgatttgggataacggggtgttaca 12423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 218
Target Start/End: Complemental strand, 14518 - 14482
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaa 218  Q
    |||||||||||||||||||| |||||||||||||||||    
T  14518 gatgtttattaaatagtttt-atattctatttaagaaa 14482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 50; Significance: 2e-19; HSPs: 4)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 188 - 311
Target Start/End: Original strand, 18197 - 18315
Alignment:
Q  188 attaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaatt 287  Q
    ||||||||||| | |||||||||||||||||||| |   |||||||||||||||||||||||||  |||||||| ||| |||||||   |||||| ||||    
T  18197 attaaatagttct-atattctatttaagaaaatttaaaaatgtagtgtgacatgcccgtttgggatttactctgatgt-atgttta---attatttaatt 18291  T
Q  288 gattttgggtaaccgggtgttaca 311  Q
    | ||||||||||| ||||||||||    
T  18292 gcttttgggtaacggggtgttaca 18315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 188 - 312
Target Start/End: Original strand, 7329 - 7452
Alignment:
Q  188 attaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaatt 287  Q
    ||||||| ||||||||||||||||||||||||||     | | |||||||||||||||||||||  |||||||| ||  ||||| | |||||||| ||||    
T  7329 attaaattgtttttatattctatttaagaaaatttgaaaacgaagtgtgacatgcccgtttgggatttactctgatg-aatgttcaattattatttaatt 7427  T
Q  288 gattttgggtaaccgggtgttacac 312  Q
    | |||||||||||  ||||||||||    
T  7428 gcttttgggtaacgaggtgttacac 7452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 201 - 261
Target Start/End: Complemental strand, 50486 - 50426
Alignment:
Q  201 tatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctg 261  Q
    |||||||||||||||| | ||   | |||||||||||||||||||||||||  ||||||||    
T  50486 tatattctatttaagagattttgataatgtagtgtgacatgcccgtttgggttttactctg 50426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #4
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 201 - 261
Target Start/End: Complemental strand, 71752 - 71692
Alignment:
Q  201 tatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctg 261  Q
    |||||||||||||||||| ||   | ||||||||| |||||||||||||||  ||||||||    
T  71752 tatattctatttaagaaattttgataatgtagtgtcacatgcccgtttgggttttactctg 71692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0512 (Bit Score: 49; Significance: 9e-19; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 181 - 261
Target Start/End: Complemental strand, 12099 - 12019
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctg 261  Q
    |||||||||||||||| ||||||||||||||||||||| ||     ||||||||||||||||||||||||| |||||||||    
T  12099 gatgtttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctg 12019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 49; Significance: 9e-19; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 190 - 311
Target Start/End: Complemental strand, 95364 - 95245
Alignment:
Q  190 taaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggat-tactctggtgtcatgtttatttattattaaattg 288  Q
    ||||||||||| ||||||||||| ||||| ||     |||||||||||||||||||||| ||||| ||||||| |||   |||||||||||||| ||||     
T  95364 taaatagttttaatattctatttgagaaattttgaaaatgtagtgtgacatgcccgttttgggatatactctgatgt---gtttatttattatttaatta 95268  T
Q  289 attttgggtaaccgggtgttaca 311  Q
    |||||||||||| ||||||||||    
T  95267 attttgggtaacggggtgttaca 95245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 201 - 261
Target Start/End: Original strand, 494657 - 494717
Alignment:
Q  201 tatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctg 261  Q
    |||||||||||||||||| ||   | | |||||||||||||||||||||||  ||||||||    
T  494657 tatattctatttaagaaattttgatgacgtagtgtgacatgcccgtttgggttttactctg 494717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 181 - 311
Target Start/End: Complemental strand, 70618 - 70486
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaa-attgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgt----ttatt 275  Q
    |||||||||||||||| |||||||||||||||||||||  |||| ||| |||||||||||||||||||||||  |||  ||| | | ||||    |||||    
T  70618 gatgtttattaaatagattttatattctatttaagaaattttgaatta-gtagtgtgacatgcccgtttgggattta--ctgatctgatgttgaattatt 70522  T
Q  276 tattattaaattgattttgggtaaccgggtgttaca 311  Q
      ||||||||||||||||||||||| ||||||||||    
T  70521 atttattaaattgattttgggtaacggggtgttaca 70486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 188 - 311
Target Start/End: Complemental strand, 6444 - 6323
Alignment:
Q  188 attaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggat-tactctggtgtcatgtttatttattattaaat 286  Q
    ||||||||||||||||||||||||||||||| ||     |||| ||||||||||||| ||| ||||| ||||||| |||    ||||||||||||| |||    
T  6444 attaaatagtttttatattctatttaagaaatttttaaaatgtggtgtgacatgcccattttgggatatactctgatgtt---tttatttattatttaat 6348  T
Q  287 tgattttgggtaaccgggtgttaca 311  Q
    ||||||||||||||  |||||||||    
T  6347 tgattttgggtaacgaggtgttaca 6323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 184 - 261
Target Start/End: Complemental strand, 32165 - 32088
Alignment:
Q  184 gtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctg 261  Q
    ||||||||||||| ||||||||||||||||||||| ||     ||||||||||||||||||||||||| |||||||||    
T  32165 gtttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctg 32088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 46; Significance: 6e-17; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 184 - 261
Target Start/End: Original strand, 82647 - 82724
Alignment:
Q  184 gtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctg 261  Q
    ||||||||||||| ||||||||||||||||||||| ||     ||||||||||||||||||||||||| |||||||||    
T  82647 gtttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgcccgtttgggaattactctg 82724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 143 - 218
Target Start/End: Original strand, 54083 - 54158
Alignment:
Q  143 aatattccgctgcaaagttt-gatgaaactattttggttgatgtttattaaatagtttttatattctatttaagaaa 218  Q
    ||||||||||||||| |||| | |||||||| |   |||||||||||||||||||| ||| ||||||||||||||||    
T  54083 aatattccgctgcaaggttttggtgaaactaataaagttgatgtttattaaatagtattt-tattctatttaagaaa 54158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 188 - 311
Target Start/End: Original strand, 7934 - 8055
Alignment:
Q  188 attaaatagtttttatattctatttaagaaaatt-gatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaat 286  Q
    ||||||||||||| |||| ||||||||||||||| || ||| |||||||||||||| ||||||||  ||||| || ||| |||| ||||||||| |||||    
T  7934 attaaatagtttt-atatgctatttaagaaaatttgaatta-gtagtgtgacatgctcgtttgggatttactgtgatgt-atgtgtatttattaataaat 8030  T
Q  287 tgattttgggtaaccgggtgttaca 311  Q
    |  ||||||||||| ||||||||||    
T  8031 tatttttgggtaacggggtgttaca 8055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 185 - 311
Target Start/End: Complemental strand, 8839 - 8716
Alignment:
Q  185 tttattaaatagtttttatattctatttaagaaaatt-gatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattatta 283  Q
    |||||||||||||||| ||||||||||||||||| || ||   | |||||||||||||||||||||||   ||||||| ||| ||||||||||||||||     
T  8839 tttattaaatagtttt-atattctatttaagaaattttgaa--aagtagtgtgacatgcccgtttgggatatactctgatgt-atgtttatttattattt 8744  T
Q  284 aattgattttgggtaaccgggtgttaca 311  Q
    ||||| ||| || |||| ||||||||||    
T  8743 aattgctttgggataacggggtgttaca 8716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 45; Significance: 2e-16; HSPs: 3)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 186 - 298
Target Start/End: Original strand, 52357 - 52465
Alignment:
Q  186 ttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaa 285  Q
    ||||||||||| ||||||| ||||||||||||  ||||   ||||||||||||||||||||||||| ||||||||  || ||||||||||||||||| ||    
T  52357 ttattaaatagattttatactctatttaagaat-ttgaaa-atgtagtgtgacatgcccgtttgggaattactcttatg-catgtttatttattatttaa 52453  T
Q  286 ttgattttgggta 298  Q
    || ||||||||||    
T  52454 tt-attttgggta 52465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 311
Target Start/End: Original strand, 30924 - 31004
Alignment:
Q  227 atgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaattgattttgggtaaccgggtgttaca 311  Q
    |||||||||||||||||||||||||  |||||||| ||| |||||||   |||||| ||||  ||||||||||| ||||||||||    
T  30924 atgtagtgtgacatgcccgtttgggatttactctgatgt-atgttta---attatttaattatttttgggtaacggggtgttaca 31004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 311
Target Start/End: Original strand, 36325 - 36405
Alignment:
Q  227 atgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaattgattttgggtaaccgggtgttaca 311  Q
    |||||||||||||||||||||||||  |||||||| ||| |||||||   |||||| ||||  ||||||||||| ||||||||||    
T  36325 atgtagtgtgacatgcccgtttgggatttactctgatgt-atgttta---attatttaattatttttgggtaacggggtgttaca 36405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 44; Significance: 9e-16; HSPs: 2)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 201 - 312
Target Start/End: Complemental strand, 20305 - 20194
Alignment:
Q  201 tatattctatttaagaaaa--ttgatttatgtagtgtgacatgcccgtttgggg-attactctggtgtcatgtttatttattattaaattgattttgggt 297  Q
    |||||||||||||| ||||  |||| ||| |||||||||||||||||||||||  ||||||||| || ||||||||||||||| | |||||||||||||     
T  20305 tatattctatttaaaaaaaatttgaatta-gtagtgtgacatgcccgtttgggtcattactctgatg-catgtttatttattaattaattgattttggg- 20209  T
Q  298 aaccgggtgttacac 312  Q
    ||| |||||||||||    
T  20208 aacggggtgttacac 20194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 178 - 250
Target Start/End: Complemental strand, 5404 - 5334
Alignment:
Q  178 gttgatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttgg 250  Q
    ||||||||||||||||||| | ||||||||||||||||||  ||||  || | ||||||||||| ||||||||    
T  5404 gttgatgtttattaaatag-tattatattctatttaagaattttgaaata-gcagtgtgacatgtccgtttgg 5334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 44; Significance: 9e-16; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 189 - 311
Target Start/End: Original strand, 39361 - 39483
Alignment:
Q  189 ttaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgttt-atttattattaaatt 287  Q
    |||||||||||||||||||||||||||||||||     | ||||||||||||| ||||||| |  |||||| | |  ||||||| |||||||||| ||||    
T  39361 ttaaatagtttttatattctatttaagaaaatt-tgcaaagtagtgtgacatgtccgtttgagatttactcagattgcatgtttaatttattatttaatt 39459  T
Q  288 gattttgggtaaccgggtgttaca 311  Q
    |||||||| |||| ||||||||||    
T  39460 gattttggataacggggtgttaca 39483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 189 - 311
Target Start/End: Original strand, 137421 - 137543
Alignment:
Q  189 ttaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgttt-atttattattaaatt 287  Q
    |||||||||||||||||||||||||||||||||     | ||||||||||||| ||||||| |  |||||| | |  ||||||| |||||||||| ||||    
T  137421 ttaaatagtttttatattctatttaagaaaatt-tgcaaagtagtgtgacatgtccgtttgagatttactcagattgcatgtttaatttattatttaatt 137519  T
Q  288 gattttgggtaaccgggtgttaca 311  Q
    |||||||| |||| ||||||||||    
T  137520 gattttggataacggggtgttaca 137543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 181 - 311
Target Start/End: Original strand, 32277 - 32406
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttatta 280  Q
    |||| ||| |||||||||||||||||||||||||| || ||     |||||||||||||||||||||||||  ||||| || |||  |||||| ||||||    
T  32277 gatgcttaataaatagtttttatattctatttaaggaattttgaaaatgtagtgtgacatgcccgtttgggttttactttgatgt-gtgtttaattatta 32375  T
Q  281 ttaaattgattttgggtaaccgggtgttaca 311  Q
    || ||||  ||||||||| | ||||||||||    
T  32376 tttaattacttttgggtagcggggtgttaca 32406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 188 - 312
Target Start/End: Original strand, 5822 - 5944
Alignment:
Q  188 attaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgt--ttggggattactctggtgtcatgtttatttattattaaa 285  Q
    ||||||||||||||||||||||||||||||| ||     ||||||||||||||||  ||  |||||  |||||||| |||     |||||||||||| ||    
T  5822 attaaatagtttttatattctatttaagaaattttgaaaatgtagtgtgacatgcgtgtgtttgggatttactctgatgtg----ttatttattatttaa 5917  T
Q  286 ttgattttgggtaaccgggtgttacac 312  Q
    ||||||||||||||| |||||||||||    
T  5918 ttgattttgggtaacagggtgttacac 5944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 185 - 311
Target Start/End: Original strand, 173702 - 173821
Alignment:
Q  185 tttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaa 284  Q
    |||||||||| ||||| ||||||||||||||||||||  |  | |||||||||||||||||||||||  ||||||||     ||| ||||||| |||| |    
T  173702 tttattaaatggtttt-atattctatttaagaaaattt-tgaaagtagtgtgacatgcccgtttgggatttactctg-----atgattatttaatattta 173794  T
Q  285 attgattttgggtaaccgggtgttaca 311  Q
    |||| ||||||||||| ||||||||||    
T  173795 attgcttttgggtaacagggtgttaca 173821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1340 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold1340
Description:

Target: scaffold1340; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 181 - 311
Target Start/End: Complemental strand, 1922 - 1795
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttatta 280  Q
    |||||||||||||||| ||||||||||||||||||||| ||     |||||||||||||||||| |||||  ||||||||| || |||||   |||||||    
T  1922 gatgtttattaaatagattttatattctatttaagaaattttgaaaatgtagtgtgacatgcccttttggtaattactctgatg-catgt---tttatta 1827  T
Q  281 ttaaattga-ttttgggtaaccgggtgttaca 311  Q
     | |||||| ||||||| ||| ||||||||||    
T  1826 attaattgatttttgggaaacggggtgttaca 1795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 185 - 311
Target Start/End: Complemental strand, 7983 - 7859
Alignment:
Q  185 tttattaaatagtttttatattctatttaagaaaa-ttgatttatgtagtgtgacatgcccgtttggggat-tactctggtgtcatgtttatttattatt 282  Q
    |||||||||||||||| |||||||||||||||||| ||||   |  ||||||||| ||||||||| ||||| ||||||| ||| ||||||||||||||||    
T  7983 tttattaaatagtttt-atattctatttaagaaaaattgaa--aactagtgtgacgtgcccgttttgggatatactctgatgt-atgtttatttattatt 7888  T
Q  283 aaattgattttgggtaaccgggtgttaca 311  Q
     ||||| ||| || |||| ||||||||||    
T  7887 taattgctttgggataacagggtgttaca 7859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 188 - 311
Target Start/End: Original strand, 8687 - 8810
Alignment:
Q  188 attaaatagtttttatattctatttaagaaaatt-gatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattatt-aaa 285  Q
    ||||||||| |||||||  |||||||||||| || |  ||| ||||||||||||||||||||||   |||||||| ||| ||||||| |||||||| |||    
T  8687 attaaatagattttataggctatttaagaaattttggatta-gtagtgtgacatgcccgtttggaatttactctgatgt-atgtttacttattatttaaa 8784  T
Q  286 ttgattttgggtaaccgggtgttaca 311  Q
    ||| ||||||||||| ||||||||||    
T  8785 ttgtttttgggtaacggggtgttaca 8810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 188 - 311
Target Start/End: Original strand, 23178 - 23301
Alignment:
Q  188 attaaatagtttttatattctatttaagaaaatt-gatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattatt-aaa 285  Q
    |||||||||||||||||  |||||||||||| || |  ||| |||||||||||||||| |||||   |||||||| ||| ||||||| |||||||| |||    
T  23178 attaaatagtttttataggctatttaagaaattttggatta-gtagtgtgacatgcccatttggaatttactctgatgt-atgtttacttattatttaaa 23275  T
Q  286 ttgattttgggtaaccgggtgttaca 311  Q
    ||| ||||||||||| ||||||||||    
T  23276 ttgtttttgggtaacggggtgttaca 23301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0407
Description:

Target: scaffold0407; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 188 - 312
Target Start/End: Original strand, 5022 - 5145
Alignment:
Q  188 attaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaatt 287  Q
    ||||||||| ||||||||||||||||||||||||     | | ||||||||||||||||||||   ||| |||| ||| || ||||  ||||||| ||||    
T  5022 attaaatagattttatattctatttaagaaaatttgaacaagaagtgtgacatgcccgtttggaatttagtctgatgt-atttttaaatattatttaatt 5120  T
Q  288 gattttgggtaaccgggtgttacac 312  Q
    | ||||||||||| |||||||||||    
T  5121 gcttttgggtaacggggtgttacac 5145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 181 - 311
Target Start/End: Original strand, 11322 - 11448
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccg-tttggggat-tactctggtgtcatgtttatttat 278  Q
    |||||||||||||||||||| ||||||||||||||||| || |   | ||||||||||||||||| ||||| ||| |||||||     ||||||||||||    
T  11322 gatgtttattaaatagtttt-atattctatttaagaaattttagaaaagtagtgtgacatgcccgttttggtgatatactctg-----atgtttatttat 11415  T
Q  279 tattaaattgattttgggtaaccgggtgttaca 311  Q
    |||| ||||| ||| || |||| ||||||||||    
T  11416 tatttaattgctttgggataacggggtgttaca 11448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 181 - 311
Target Start/End: Original strand, 19502 - 19628
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccg-tttggggat-tactctggtgtcatgtttatttat 278  Q
    |||||||||||||||||||| ||||||||||||||||| || |   | ||||||||||||||||| ||||| ||| |||||||     ||||||||||||    
T  19502 gatgtttattaaatagtttt-atattctatttaagaaattttagaaaagtagtgtgacatgcccgttttggtgatatactctg-----atgtttatttat 19595  T
Q  279 tattaaattgattttgggtaaccgggtgttaca 311  Q
    |||| ||||| ||| || |||| ||||||||||    
T  19596 tatttaattgctttgggataacggggtgttaca 19628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 232 - 311
Target Start/End: Original strand, 3039 - 3118
Alignment:
Q  232 gtgtgacatgcccgtttgggg-attactctggtgtcatgtttatttattattaaattgattttgggtaaccgggtgttaca 311  Q
    ||||||||||||||||||||  ||||||||| || ||||||||||||||| | ||||| ||||||||||| ||||||||||    
T  3039 gtgtgacatgcccgtttgggttattactctgatg-catgtttatttattaattaattgcttttgggtaacggggtgttaca 3118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 299
Target Start/End: Original strand, 17744 - 17861
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggg-gattactctggtgtcatgtttatttatt 279  Q
    |||||||||||| |||  |||||||||||||||||||| ||     ||  |||||||||||||||||||||  ||||||||| || |||| |||||||||    
T  17744 gatgtttattaa-tagagtttatattctatttaagaaattttgaaaattaagtgtgacatgcccgtttgggttattactctgatg-catgattatttatt 17841  T
Q  280 attaaattgattttgggtaa 299  Q
    | | ||||| ||||||||||    
T  17842 aattaattgcttttgggtaa 17861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 143 - 218
Target Start/End: Complemental strand, 51126 - 51051
Alignment:
Q  143 aatattccgctgcaaagttt-gatgaaactattttggttgatgtttattaaatagtttttatattctatttaagaaa 218  Q
    |||||||||||||||||||| ||||||||| |||  |||| |||||||||||||| ||||||| |||||||||||||    
T  51126 aatattccgctgcaaagttttgatgaaactgtttaagttgttgtttattaaatag-ttttataatctatttaagaaa 51051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 218
Target Start/End: Complemental strand, 44996 - 44960
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaa 218  Q
    |||||||||||||||||||| |||||||||||||||||    
T  44996 gatgtttattaaatagtttt-atattctatttaagaaa 44960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1433 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold1433
Description:

Target: scaffold1433; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 178 - 217
Target Start/End: Original strand, 225 - 264
Alignment:
Q  178 gttgatgtttattaaatagtttttatattctatttaagaa 217  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  225 gttgatgtttattaaatagtttttatattctatttaagaa 264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0511 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0511
Description:

Target: scaffold0511; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 179 - 218
Target Start/End: Original strand, 667 - 706
Alignment:
Q  179 ttgatgtttattaaatagtttttatattctatttaagaaa 218  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  667 ttgatgtttattaaatagtttttatattctatttaagaaa 706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 3)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 181 - 312
Target Start/End: Complemental strand, 28231 - 28106
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttatta 280  Q
    |||||||||||||||||||| ||||||||||||||||||||     | |||| ||||||||||||||||||   |||||||     |||||||||| |||    
T  28231 gatgtttattaaatagtttt-atattctatttaagaaaattttgaaaagtagcgtgacatgcccgtttgggatatactctg-----atgtttatttgtta 28138  T
Q  281 ttaaattgattttgggtaaccgggtgttacac 312  Q
    || ||||| ||| || |||| |||||||||||    
T  28137 tttaattgttttgggataacggggtgttacac 28106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 311
Target Start/End: Complemental strand, 37799 - 37719
Alignment:
Q  227 atgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaattgattttgggtaaccgggtgttaca 311  Q
    |||||||||||||||||||||||||  |||||||| ||| |||||||   |||||| ||||  ||||||||||| ||||||||||    
T  37799 atgtagtgtgacatgcccgtttgggatttactctgatgt-atgttta---attatttaattacttttgggtaacggggtgttaca 37719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 311
Target Start/End: Original strand, 47437 - 47480
Alignment:
Q  268 tgtttatttattattaaattgattttgggtaaccgggtgttaca 311  Q
    ||||||||||||| | ||||||||||||||||| ||||||||||    
T  47437 tgtttatttattaattaattgattttgggtaacggggtgttaca 47480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 181 - 251
Target Start/End: Original strand, 74839 - 74910
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaa-attgatttatgtagtgtgacatgcccgtttggg 251  Q
    |||||||| | ||||| |||||||||||||||||||||  |||||  |||||||||||||||||||||||||    
T  74839 gatgtttaatgaatagattttatattctatttaagaaattttgataaatgtagtgtgacatgcccgtttggg 74910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 184 - 246
Target Start/End: Complemental strand, 108396 - 108335
Alignment:
Q  184 gtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgt 246  Q
    ||||||||||||||||| ||||||||||||||||| || |   | ||||||||||||||||||    
T  108396 gtttattaaatagtttt-atattctatttaagaaattttagaaaagtagtgtgacatgcccgt 108335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 188 - 313
Target Start/End: Original strand, 53127 - 53249
Alignment:
Q  188 attaaatagtttttatattctatttaagaaaa--ttgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaa 285  Q
    |||||||||||||  | |||||||||||||||  ||||   |||||||||||||||||||||||||  |||||||| ||| |||||||   |||||| ||    
T  53127 attaaatagttttatttttctatttaagaaaaatttgaaa-atgtagtgtgacatgcccgtttgggatttactctgatgt-atgttta---attatttaa 53221  T
Q  286 ttgattttgggtaaccgggtgttacaca 313  Q
    ||  ||||||||||| ||||||||||||    
T  53222 ttacttttgggtaacggggtgttacaca 53249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 188 - 311
Target Start/End: Original strand, 47721 - 47841
Alignment:
Q  188 attaaatagtttttatattctatttaagaaaa--ttgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaa 285  Q
    |||||||||||||  | |||||||||||||||  ||||   |||||||||||||||||||||||||  |||||||| ||| |||||||   |||||| ||    
T  47721 attaaatagttttatttttctatttaagaaaaatttgaaa-atgtagtgtgacatgcccgtttgggatttactctgatgt-atgttta---attatttaa 47815  T
Q  286 ttgattttgggtaaccgggtgttaca 311  Q
    ||  ||||||||||| ||||||||||    
T  47816 ttacttttgggtaacggggtgttaca 47841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 143 - 251
Target Start/End: Complemental strand, 64488 - 64381
Alignment:
Q  143 aatattccgctgcaaagttt-gatgaaactattttggttgatgtttattaaatagtttttatattctatttaagaaa-attgatttatgtagtgtgacat 240  Q
    ||||||||||||||| |||| |||| |||| |||  |||| |||||||||||||| ||||||| |||||||||||||  ||||   | ||||||||||||    
T  64488 aatattccgctgcaaggttttgatggaactgtttaagttgttgtttattaaatag-ttttataatctatttaagaaattttga--aaagtagtgtgacat 64392  T
Q  241 gcccgtttggg 251  Q
    |||||||||||    
T  64391 gcccgtttggg 64381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 188 - 312
Target Start/End: Complemental strand, 29063 - 28940
Alignment:
Q  188 attaaatagtttttatattctatttaagaaaa-ttgatttatgtagtgtgacatgcccgtttgggg-attactctggtgtcatgtttatttattattaaa 285  Q
    |||||||||||||||||| ||||||||| ||  |||  ||| ||||||||||| |||||||||||  ||||||||| || ||||||||||||||| | ||    
T  29063 attaaatagtttttatatgctatttaaggaatcttggatta-gtagtgtgacacgcccgtttgggttattactctgatg-catgtttatttattaattaa 28966  T
Q  286 ttgattttgggtaaccgggtgttacac 312  Q
    |||||||| || ||| |||||||||||    
T  28965 ttgatttttgg-aacggggtgttacac 28940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 143 - 217
Target Start/End: Original strand, 125605 - 125679
Alignment:
Q  143 aatattccgctgcaaagttt-gatgaaactattttggttgatgtttattaaatagtttttatattctatttaagaa 217  Q
    ||||||||||||||| |||| | |||||||| |   |||||||||||||||||||| ||| |||||||||||||||    
T  125605 aatattccgctgcaaggttttggtgaaactaataaagttgatgtttattaaatagtattt-tattctatttaagaa 125679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 188 - 312
Target Start/End: Original strand, 2189 - 2309
Alignment:
Q  188 attaaatagtttttatattctatttaagaaaa--ttgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaa 285  Q
    ||||||||||||| ||||||||||||||||||  ||||   |||||||||||||| ||||||||||  |||||||| ||| |||||||   |||||| ||    
T  2189 attaaatagtttt-atattctatttaagaaaaatttgaaa-atgtagtgtgacatacccgtttgggatttactctgatgt-atgttta---attatttaa 2282  T
Q  286 ttgattttgggtaaccgggtgttacac 312  Q
    ||  ||||||||||| |||||||||||    
T  2283 ttacttttgggtaacggggtgttacac 2309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326 (Bit Score: 38; Significance: 0.000000000003; HSPs: 5)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 179 - 311
Target Start/End: Complemental strand, 8050 - 7921
Alignment:
Q  179 ttgatgttta-ttaaatagtttttatattctatttaagaa-aattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttattt 276  Q
    |||||||||| |||||||||||||||||||||||||||||   ||||   |||||||||||||||||||||||||   ||||||| |   ||| ||||||    
T  8050 ttgatgtttaattaaatagtttttatattctatttaagaatttttga--aatgtagtgtgacatgcccgtttgggatatactctgat---atgattattt 7956  T
Q  277 attattaaattgattttgggtaaccgggtgttaca 311  Q
    |||| | ||||| ||| || |||| ||||||||||    
T  7955 attaattaattgctttgggataacggggtgttaca 7921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 179 - 311
Target Start/End: Complemental strand, 15952 - 15823
Alignment:
Q  179 ttgatgttta-ttaaatagtttttatattctatttaagaa-aattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttattt 276  Q
    |||||||||| |||||||||||||||||||||||||||||   ||||   |||||||||||||||||||||||||   ||||||| |   ||| ||||||    
T  15952 ttgatgtttaattaaatagtttttatattctatttaagaatttttga--aatgtagtgtgacatgcccgtttgggatatactctgat---atgattattt 15858  T
Q  277 attattaaattgattttgggtaaccgggtgttaca 311  Q
    |||| | ||||| ||| || |||| ||||||||||    
T  15857 attaattaattgctttgggataacggggtgttaca 15823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 201 - 251
Target Start/End: Original strand, 1101 - 1150
Alignment:
Q  201 tatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggg 251  Q
    |||||||||||||||||| ||||  | ||||||||||||||||||||||||    
T  1101 tatattctatttaagaaatttgaaat-tgtagtgtgacatgcccgtttggg 1150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 218
Target Start/End: Original strand, 6081 - 6117
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaa 218  Q
    |||||||||||||||||||| |||||||||||||||||    
T  6081 gatgtttattaaatagtttt-atattctatttaagaaa 6117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 218
Target Start/End: Original strand, 13983 - 14019
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaa 218  Q
    |||||||||||||||||||| |||||||||||||||||    
T  13983 gatgtttattaaatagtttt-atattctatttaagaaa 14019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 143 - 218
Target Start/End: Original strand, 9948 - 10023
Alignment:
Q  143 aatattccgctgcaaag-tttgatgaaactattttggttgatgtttattaaatagtttttatattctatttaagaaa 218  Q
    ||||||||||||||||| |||| |||||||||    ||||||||||||||||||| | |||||||||||||||||||    
T  9948 aatattccgctgcaaagttttggtgaaactatcaaagttgatgtttattaaatag-tattatattctatttaagaaa 10023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 181 - 261
Target Start/End: Complemental strand, 466 - 387
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctg 261  Q
    ||||||||| |||||||| | ||||||||||||||||||||  |  | |||||||||||||||||||||||  ||||||||    
T  466 gatgtttatgaaatagttat-atattctatttaagaaaatttttaaaagtagtgtgacatgcccgtttgggatttactctg 387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 181 - 311
Target Start/End: Original strand, 27432 - 27559
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttatta 280  Q
    ||||||||||||||||||| |||||||||||||||||| ||     |||| |||||||||| |||||||||   |||| || |   ||| ||||||||||    
T  27432 gatgtttattaaatagtttgtatattctatttaagaaattttgaaaatgttgtgtgacatgtccgtttgggatatactatgat---atgattatttatta 27528  T
Q  281 ttaaattgattttgggtaaccgggtgttaca 311  Q
    || ||||| ||| || |||| ||||||||||    
T  27529 tttaattgctttgggataacagggtgttaca 27559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 143 - 218
Target Start/End: Original strand, 73531 - 73606
Alignment:
Q  143 aatattccgctgcaaagttt-gatgaaactattttggttgatgtttattaaatagtttttatattctatttaagaaa 218  Q
    ||||||||||||||| |||| | |||||||| |   ||||||||||||||||||| |||||||||||||||||||||    
T  73531 aatattccgctgcaaggttttggtgaaactaataaagttgatgtttattaaatag-ttttatattctatttaagaaa 73606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 178 - 218
Target Start/End: Original strand, 61679 - 61718
Alignment:
Q  178 gttgatgtttattaaatagtttttatattctatttaagaaa 218  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  61679 gttgatgtttattaaatag-ttttatattctatttaagaaa 61718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 185 - 311
Target Start/End: Original strand, 157432 - 157554
Alignment:
Q  185 tttattaaatagtttttatattctatttaagaaaatt-gatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattatta 283  Q
    |||||||||||||||| ||| ||||||||||||| || ||   | |||||||||||||||||||| || | ||||||| ||| ||| ||||||||||||     
T  157432 tttattaaatagtttt-ataatctatttaagaaattttgaa--aagtagtgtgacatgcccgttttggaaatactctgatgt-atgattatttattattt 157527  T
Q  284 aattgattttgggtaaccgggtgttaca 311  Q
    ||||| ||||||||||  ||||||||||    
T  157528 aattg-ttttgggtaatggggtgttaca 157554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0827 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0827
Description:

Target: scaffold0827; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 143 - 251
Target Start/End: Original strand, 1538 - 1645
Alignment:
Q  143 aatattccgctgcaaag-tttgatgaaactattttggttgatgtttattaaatagtttttatattctatttaagaaa-attgatttatgtagtgtgacat 240  Q
    ||||||||||||||||| |||  ||||||| |||  |||| |||||||||||||| ||||||| |||||||||||||  ||||   | ||||||||||||    
T  1538 aatattccgctgcaaagtttttctgaaactgtttaagttgttgtttattaaatag-ttttataatctatttaagaaattttga--aaagtagtgtgacat 1634  T
Q  241 gcccgtttggg 251  Q
    |||||||||||    
T  1635 gcccgtttggg 1645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 185 - 251
Target Start/End: Complemental strand, 22159 - 22093
Alignment:
Q  185 tttattaaatagtttttatattctatttaagaaaa-ttgatttatgtagtgtgacatgcccgtttggg 251  Q
    |||||||||||||||| |||||||||||||||||| ||||   ||| |||||||||||||||||||||    
T  22159 tttattaaatagtttt-atattctatttaagaaaatttgaaaaatgaagtgtgacatgcccgtttggg 22093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 184 - 249
Target Start/End: Complemental strand, 27493 - 27430
Alignment:
Q  184 gtttattaaatagtttttatattctatttaagaaaa-ttgatttatgtagtgtgacatgcccgtttg 249  Q
    ||||||||||||||||| |||||||||||||||||| ||||   | |||||||||||||||||||||    
T  27493 gtttattaaatagtttt-atattctatttaagaaaatttga--aaagtagtgtgacatgcccgtttg 27430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 181 - 251
Target Start/End: Complemental strand, 23852 - 23784
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggg 251  Q
    |||||||||||||||||||  ||||||||||||||||||||     | |||||||||||||||||||||||    
T  23852 gatgtttattaaatagttt--atattctatttaagaaaattttgaaaagtagtgtgacatgcccgtttggg 23784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1488 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold1488
Description:

Target: scaffold1488; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 311
Target Start/End: Original strand, 122 - 202
Alignment:
Q  227 atgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaattgattttgggtaaccgggtgttaca 311  Q
    |||||||||||||||||||||||||  |||||||| || ||||||||   |||||| ||||  ||||||||||| ||||||||||    
T  122 atgtagtgtgacatgcccgtttgggatttactctgatg-catgttta---attatttaattacttttgggtaacggggtgttaca 202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0708 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0708
Description:

Target: scaffold0708; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 311
Target Start/End: Original strand, 211 - 291
Alignment:
Q  227 atgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaattgattttgggtaaccgggtgttaca 311  Q
    |||||||||||||||||||||||||  |||||||| ||| |||||||   |||||| ||||  ||||||||||| ||||||||||    
T  211 atgtagtgtgacatgcccgtttgggatttactctgatgt-atgttta---attatttaattacttttgggtaacggggtgttaca 291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 181 - 251
Target Start/End: Original strand, 16710 - 16779
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggg 251  Q
    |||||||||||||||||||| ||||||||||||||||| ||     ||||| |||||||||||||||||||    
T  16710 gatgtttattaaatagtttt-atattctatttaagaaattttgaaaatgtattgtgacatgcccgtttggg 16779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 311
Target Start/End: Complemental strand, 87208 - 87128
Alignment:
Q  227 atgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaattgattttgggtaaccgggtgttaca 311  Q
    |||||||||||||||||||||||||  |||||||| ||| |||||||   |||||| ||||  ||||||||||| ||||||||||    
T  87208 atgtagtgtgacatgcccgtttgggatttactctgatgt-atgttta---attatttaattacttttgggtaacggggtgttaca 87128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1098 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold1098
Description:

Target: scaffold1098; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 143 - 223
Target Start/End: Complemental strand, 1372 - 1293
Alignment:
Q  143 aatattccgctgcaaag-tttgatgaaactattttggttgatgtttattaaatagtttttatattctatttaagaaaattga 223  Q
    ||||||||||||||||| |||| |||||||| ||  |||||| ||||||||||||| ||| |||||||||||||||| ||||    
T  1372 aatattccgctgcaaagttttggtgaaactaattaagttgat-tttattaaatagtattt-tattctatttaagaaatttga 1293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 271 - 308
Target Start/End: Complemental strand, 767 - 730
Alignment:
Q  271 ttatttattattaaattgattttgggtaaccgggtgtt 308  Q
    |||||||||||||||||||||||||||||| |||||||    
T  767 ttatttattattaaattgattttgggtaacggggtgtt 730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 185 - 311
Target Start/End: Complemental strand, 50632 - 50510
Alignment:
Q  185 tttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggggat-tactctggtgtcatgtttatttattatta 283  Q
    |||||||||||||||| ||||||||||||||||| ||  |  | |||| ||||||||||||||| ||||| |||||||  |   |||||||||||||||     
T  50632 tttattaaatagtttt-atattctatttaagaaattttgtaaa-gtagcgtgacatgcccgttttgggatatactctgaag---tgtttatttattattt 50538  T
Q  284 aattgattttgggtaaccgggtgttaca 311  Q
    ||||| ||| || |||| ||||||||||    
T  50537 aattgctttgggataacagggtgttaca 50510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 178 - 250
Target Start/End: Complemental strand, 4229 - 4159
Alignment:
Q  178 gttgatgtttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttgg 250  Q
    |||||||||||||||||||| || ||||||||||||||||  ||||  || | ||||||||||||||||||||    
T  4229 gttgatgtttattaaatagtatt-atattctatttaagaattttgaaata-gcagtgtgacatgcccgtttgg 4159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 229 - 313
Target Start/End: Complemental strand, 17980 - 17897
Alignment:
Q  229 gtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaattgattttgggtaaccgggtgttacaca 313  Q
    ||||||||||||||||||||| |   ||||||| ||| || ||||||||||||| ||||| ||| || |||| ||||||||||||    
T  17980 gtagtgtgacatgcccgtttgagatatactctgatgt-atatttatttattatttaattgctttgggataacagggtgttacaca 17897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 181 - 221
Target Start/End: Complemental strand, 15320 - 15281
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaatt 221  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  15320 gatgtttattaaatagtttt-atattctatttaagaaaatt 15281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 181 - 251
Target Start/End: Complemental strand, 44091 - 44023
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaa-ttgatttatgtagtgtgacatgcccgtttggg 251  Q
    |||||| ||||||||||||| |||||||||||||||||| ||||   | |||||||||||||||||||||||    
T  44091 gatgttcattaaatagtttt-atattctatttaagaaaatttga--aaagtagtgtgacatgcccgtttggg 44023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 33; Significance: 0.000000003; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 271 - 311
Target Start/End: Complemental strand, 258174 - 258134
Alignment:
Q  271 ttatttattattaaattgattttgggtaaccgggtgttaca 311  Q
    |||||||||||||||||||||||||| ||| ||||||||||    
T  258174 ttatttattattaaattgattttgggaaacggggtgttaca 258134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 271 - 311
Target Start/End: Complemental strand, 264539 - 264499
Alignment:
Q  271 ttatttattattaaattgattttgggtaaccgggtgttaca 311  Q
    |||||||||||||||||||||||||| ||| ||||||||||    
T  264539 ttatttattattaaattgattttgggaaacggggtgttaca 264499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 143 - 218
Target Start/End: Original strand, 18826 - 18901
Alignment:
Q  143 aatattccgctgcaaagttt-gatgaaactattttggttgatgtttattaaatagtttttatattctatttaagaaa 218  Q
    ||||||||||||||| |||| | |||||||| |   |||| ||||||||||||||| || |||||||||||||||||    
T  18826 aatattccgctgcaaggttttggtgaaactaataaagttggtgtttattaaatagtatt-atattctatttaagaaa 18901  T

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Target: scaffold1684 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold1684
Description:

Target: scaffold1684; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 315
Target Start/End: Complemental strand, 1005 - 872
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaatt-gatttatgtagtgtgacatgcccgtttggggattactctggtgtcatgtttatttatt 279  Q
    ||||| |||||||||| ||||||||| ||||||  ||| || || ||| | |||||||||||||| || ||  | ||||||| || ||||||||||||||    
T  1005 gatgtgtattaaatagattttatattttatttacaaaattttgaatta-gaagtgtgacatgcccattgggttaatactctgatg-catgtttatttatt 908  T
Q  280 attaaattgattttgggtaaccgggtgttacacaca 315  Q
    | | |||||||| | || ||| ||||||||||||||    
T  907 aattaattgattattgggaacggggtgttacacaca 872  T

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Target: scaffold1405 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold1405
Description:

Target: scaffold1405; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 196 - 251
Target Start/End: Complemental strand, 1619 - 1564
Alignment:
Q  196 gtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggg 251  Q
    |||| |||||||||||||||||| ||   | |||||||||||||||||||||||||    
T  1619 gtttatatattctatttaagaaattttgatgatgtagtgtgacatgcccgtttggg 1564  T

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Target: scaffold1311 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold1311
Description:

Target: scaffold1311; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 272 - 311
Target Start/End: Complemental strand, 1764 - 1725
Alignment:
Q  272 tatttattattaaattgattttgggtaaccgggtgttaca 311  Q
    ||||||||||||||||||||||||| ||| ||||||||||    
T  1764 tatttattattaaattgattttgggaaacggggtgttaca 1725  T

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Target: scaffold0751 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0751
Description:

Target: scaffold0751; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 179 - 218
Target Start/End: Complemental strand, 6570 - 6532
Alignment:
Q  179 ttgatgtttattaaatagtttttatattctatttaagaaa 218  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  6570 ttgatgtttattaaatag-ttttatattctatttaagaaa 6532  T

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Target: scaffold0348 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 219
Target Start/End: Original strand, 14244 - 14283
Alignment:
Q  181 gatgtttatt-aaatagtttttatattctatttaagaaaa 219  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  14244 gatgtttatttaaatagtttttatattctatttaagaaaa 14283  T

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Target: scaffold0947 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0947
Description:

Target: scaffold0947; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 188 - 218
Target Start/End: Original strand, 478 - 508
Alignment:
Q  188 attaaatagtttttatattctatttaagaaa 218  Q
    |||||||||||||||||||||||||||||||    
T  478 attaaatagtttttatattctatttaagaaa 508  T

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Target: scaffold0556 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 185 - 311
Target Start/End: Original strand, 5629 - 5752
Alignment:
Q  185 tttattaaatagtttttatattctattt-aagaaaattgatttatgtagtgtgacatgcccgtttggggat-tactctggtgtcatgtttatttattatt 282  Q
    |||||||||||||||| ||||||||||| |||||| || ||  | ||||||||||||||||||||  |||| ||||||| ||   |||||||||| ||||    
T  5629 tttattaaatagtttt-atattctattttaagaaattttataaa-gtagtgtgacatgcccgtttttggatatactctgatg---tgtttatttaatatt 5723  T
Q  283 aaattgattttgggtaaccgggtgttaca 311  Q
     ||||| ||| || |||| ||||||||||    
T  5724 taattgctttgggataacggggtgttaca 5752  T

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Target: scaffold0506 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0506
Description:

Target: scaffold0506; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 233 - 311
Target Start/End: Complemental strand, 7887 - 7811
Alignment:
Q  233 tgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaattgattttgggtaaccgggtgttaca 311  Q
    |||||||| ||||||| || | ||||||| ||| ||| |||||||||||| ||||| ||||||||||| ||||||||||    
T  7887 tgtgacatacccgttttggaaatactctgatgt-atgattatttattatttaattg-ttttgggtaacggggtgttaca 7811  T

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Target: scaffold0249 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 185 - 251
Target Start/End: Original strand, 8388 - 8453
Alignment:
Q  185 tttattaaatagtttttatattctatttaagaaaattgatttatgtagtgtgacatgcccgtttggg 251  Q
    |||||||||||||||| |||| |||||||||||||||     ||| |||||||||||||||||||||    
T  8388 tttattaaatagtttt-atatcctatttaagaaaatttgaaaatgaagtgtgacatgcccgtttggg 8453  T

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Target: scaffold0244 (Bit Score: 31; Significance: 0.00000005; HSPs: 2)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 180 - 218
Target Start/End: Complemental strand, 9034 - 8997
Alignment:
Q  180 tgatgtttattaaatagtttttatattctatttaagaaa 218  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  9034 tgatgtttattaaatagtttt-atattctatttaagaaa 8997  T

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Target: scaffold0244; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 180 - 218
Target Start/End: Complemental strand, 20152 - 20115
Alignment:
Q  180 tgatgtttattaaatagtttttatattctatttaagaaa 218  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  20152 tgatgtttattaaatagtttt-atattctatttaagaaa 20115  T

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Target: scaffold0201 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 180 - 218
Target Start/End: Complemental strand, 25738 - 25701
Alignment:
Q  180 tgatgtttattaaatagtttttatattctatttaagaaa 218  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  25738 tgatgtttattaaatagtttt-atattctatttaagaaa 25701  T

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Target: scaffold0130 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 180 - 218
Target Start/End: Complemental strand, 12183 - 12146
Alignment:
Q  180 tgatgtttattaaatagtttttatattctatttaagaaa 218  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  12183 tgatgtttattaaatagtttt-atattctatttaagaaa 12146  T

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Target: scaffold0054 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 180 - 218
Target Start/End: Original strand, 62450 - 62487
Alignment:
Q  180 tgatgtttattaaatagtttttatattctatttaagaaa 218  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  62450 tgatgtttattaaatag-ttttatattctatttaagaaa 62487  T

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Target: scaffold0742 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0742
Description:

Target: scaffold0742; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 275 - 312
Target Start/End: Complemental strand, 3091 - 3054
Alignment:
Q  275 ttattattaaattgattttgggtaaccgggtgttacac 312  Q
    |||||||| ||||||||||||| |||||||||||||||    
T  3091 ttattatttaattgattttgggaaaccgggtgttacac 3054  T

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Target: scaffold0239 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 233 - 310
Target Start/End: Original strand, 15198 - 15273
Alignment:
Q  233 tgtgacatgcccgtttggggattactctggtgtcatgtttatttattattaaattgattttgggtaaccgggtgttac 310  Q
    |||||||||||||||| || | ||||||| ||| ||| |||||||||||| ||| | ||||||||||| |||||||||    
T  15198 tgtgacatgcccgttttggaaatactctgatgt-atgattatttattatttaatag-ttttgggtaacggggtgttac 15273  T

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Target: scaffold0091 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 218
Target Start/End: Original strand, 23369 - 23405
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaa 218  Q
    |||||||||||||||||||| |||||||||||||||||    
T  23369 gatgtttattaaatagtttt-atattctatttaagaaa 23405  T

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Target: scaffold0091; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 218
Target Start/End: Original strand, 27566 - 27602
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaa 218  Q
    |||||||||||||||||||| |||||||||||||||||    
T  27566 gatgtttattaaatagtttt-atattctatttaagaaa 27602  T

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Target: scaffold0634 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 2088 - 2021
Alignment:
Q  184 gtttattaaatagtttttatatt-ctatttaagaaaattgatttatgtagtgtgacatgcccgtttggg 251  Q
    ||||||||||||||||| ||||| |||||||||||||||     ||| |||||||||||||||||||||    
T  2088 gtttattaaatagtttt-atatttctatttaagaaaatttgaaaatgaagtgtgacatgcccgtttggg 2021  T

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Target: scaffold0160 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 271 - 311
Target Start/End: Complemental strand, 7609 - 7569
Alignment:
Q  271 ttatttattattaaattgattttgggtaaccgggtgttaca 311  Q
    ||||||||||||||||||| |||||| ||| ||||||||||    
T  7609 ttatttattattaaattgactttgggaaacggggtgttaca 7569  T

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Target: scaffold0154 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 188 - 247
Target Start/End: Complemental strand, 29259 - 29201
Alignment:
Q  188 attaaatagtttttatattctatttaagaaa-attgatttatgtagtgtgacatgcccgtt 247  Q
    ||||||||||||| |||||||||||||||||  |||| ||| |||||||||||||||||||    
T  29259 attaaatagtttt-atattctatttaagaaattttgaatta-gtagtgtgacatgcccgtt 29201  T

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Target: scaffold0060 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 181 - 251
Target Start/End: Complemental strand, 40745 - 40674
Alignment:
Q  181 gatgtttattaaatag-tttttatattctatttaagaaa-attgatttatgtagtgtgacatgcccgtttggg 251  Q
    ||||| || ||||||| ||||||||||||||||||||||  ||||| || ||||||||||||||| |||||||    
T  40745 gatgtgtaataaatagatttttatattctatttaagaaattttgatata-gtagtgtgacatgcctgtttggg 40674  T

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Target: scaffold0046 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 181 - 221
Target Start/End: Original strand, 79031 - 79071
Alignment:
Q  181 gatgtttattaaatagtttttatattctatttaagaaaatt 221  Q
    |||||||| |||||||  |||||||||||||||||||||||    
T  79031 gatgtttactaaatagactttatattctatttaagaaaatt 79071  T

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Target: scaffold0021 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 271 - 311
Target Start/End: Complemental strand, 140769 - 140729
Alignment:
Q  271 ttatttattattaaattgattttgggtaaccgggtgttaca 311  Q
    |||||||||||||||||||||||||| |||  |||||||||    
T  140769 ttatttattattaaattgattttgggaaacgtggtgttaca 140729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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