View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2360_high_3 (Length: 242)
Name: NF2360_high_3
Description: NF2360
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2360_high_3 |
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Alignment Details
Target: chr7 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 18 - 233
Target Start/End: Original strand, 43323334 - 43323549
Alignment:
| Q |
18 |
aacataaccattactgcgacaactattaaaagaaagagatatatttgctggatgaatactttaccatccaaaatgatgaaagacacaacaaactaaaatt |
117 |
Q |
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| T |
43323334 |
aacataaccattactgcgacaactattaaaagaaagagatatatttgctggatgaatactttaccatccaaaatgatgaaagacacaacaaactaaaatt |
43323433 |
T |
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| Q |
118 |
ggaatctcaactacttatataaccaacgttgttttgacacgtcacaatagtaaatacttgtgttctatacatattaagaacaaacagtagcaaaataaaa |
217 |
Q |
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||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
43323434 |
ggaatctcaactacttatataaccaacattgttttgacaagtcacaatagtaaatacttgtgttctatacatattaagaacaaacagtagaaaaataaaa |
43323533 |
T |
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| Q |
218 |
gaccaccctcctatgc |
233 |
Q |
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|||||||||||||||| |
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| T |
43323534 |
gaccaccctcctatgc |
43323549 |
T |
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