View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2361_low_6 (Length: 338)
Name: NF2361_low_6
Description: NF2361
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2361_low_6 |
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Alignment Details
Target: chr3 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 30 - 309
Target Start/End: Complemental strand, 2206723 - 2206440
Alignment:
| Q |
30 |
aacattttgtatacttaactccatcctttctatcaagattacattcacaatataaatatttgccatgatatcgatgataagcttatttggagaagttacc |
129 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
2206723 |
aacattttgtatacttaactccatcctttctatcaagattacattcacaatataaacattggccatgatatcgatgataagcttatttggagaagttacc |
2206624 |
T |
|
| Q |
130 |
ataatagtatttactcagtcattcagggctaca-----cttgattgcttgtccaatcaatagatcatgccaattatttgttggaagtggatctggagttt |
224 |
Q |
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||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
2206623 |
ataatagcatttactcagtcattcagggctacatgtggcttgattgcttgtccaatcaatagatcatgccaattatttgttggaagtggatttggagttt |
2206524 |
T |
|
| Q |
225 |
accaatatcagagaaccttaagcannnnnnngttggtgaagcaaggtagtcttcctacaaatgcttcgagaggtttgagacatct |
309 |
Q |
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|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2206523 |
accaatatcagagaaccttaagca-ttttttgttggtgaagcaaggtagtcttcctacaaatgcttcgagaggtttgagacatct |
2206440 |
T |
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