View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2361_low_7 (Length: 336)
Name: NF2361_low_7
Description: NF2361
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2361_low_7 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 312; Significance: 1e-176; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 312; E-Value: 1e-176
Query Start/End: Original strand, 17 - 336
Target Start/End: Original strand, 52925784 - 52926103
Alignment:
| Q |
17 |
atggacatcatcaaggttgcacagcctccaaaagtttctcataaacttgtctagcagtgagatcctccacctgaaatgatggtgaaaattagcgttagta |
116 |
Q |
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| T |
52925784 |
atggacagcatcaaggttgcacagcctccaaaagtttctcataaacttgtctagcagtgagatcctccacctgaaatgatggtgaaaattagcattagta |
52925883 |
T |
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| Q |
117 |
tatatgtttgttgagaaatacttactacttggttaagttgaagaagacatgactgaccacaagaagctttgacttgttattccatcctctctgaagagtc |
216 |
Q |
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| T |
52925884 |
tatatgtttgttgagaaatacttactacttggttaagttgaagaagacatgactgaccacaagaagctttgacttgttattccatcctctctgaagagtc |
52925983 |
T |
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| Q |
217 |
atttgactcaatcttaaacctaaaacctttcccataaactccaaaagttcattgttagcttctccacgagcagcaggagcagctacagtgacacgaacat |
316 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
52925984 |
atttgactcaatcttaaacctaaaacctttcccataaactccaaaagttcattgttagcttctccacgagcagcaggagcagctacagtgacacgaacat |
52926083 |
T |
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| Q |
317 |
catcagcatttactctggtg |
336 |
Q |
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|||||||||||||||||||| |
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| T |
52926084 |
catcagcatttactctggtg |
52926103 |
T |
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