View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2362_high_3 (Length: 415)

Name: NF2362_high_3
Description: NF2362
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2362_high_3
NF2362_high_3
[»] chr8 (62 HSPs)
chr8 (11-398)||(20279308-20279695)
chr8 (11-398)||(21065935-21066322)
chr8 (300-398)||(22209372-22209470)
chr8 (298-394)||(9460428-9460524)
chr8 (300-396)||(36348531-36348627)
chr8 (289-398)||(39093050-39093160)
chr8 (305-398)||(12782743-12782836)
chr8 (300-394)||(7513337-7513431)
chr8 (292-394)||(42801049-42801150)
chr8 (321-398)||(1876545-1876622)
chr8 (293-390)||(36924009-36924106)
chr8 (298-397)||(11077886-11077985)
chr8 (300-393)||(7528269-7528360)
chr8 (292-394)||(37564366-37564468)
chr8 (292-397)||(31264964-31265069)
chr8 (305-394)||(41385235-41385324)
chr8 (300-396)||(27801268-27801364)
chr8 (292-396)||(39691148-39691252)
chr8 (310-369)||(24103103-24103162)
chr8 (309-374)||(8108298-8108364)
chr8 (292-398)||(28207590-28207696)
chr8 (291-360)||(1576395-1576464)
chr8 (337-398)||(5687256-5687317)
chr8 (300-396)||(16723237-16723333)
chr8 (300-396)||(30534986-30535082)
chr8 (310-370)||(39333551-39333611)
chr8 (336-396)||(40298849-40298909)
chr8 (306-369)||(2445172-2445235)
chr8 (292-391)||(13028103-13028201)
chr8 (291-370)||(15352104-15352182)
chr8 (309-391)||(5293795-5293877)
chr8 (309-398)||(7044382-7044469)
chr8 (328-394)||(12002237-12002303)
chr8 (328-398)||(14016937-14017007)
chr8 (292-393)||(29487093-29487195)
chr8 (321-395)||(31844281-31844354)
chr8 (337-394)||(5968380-5968437)
chr8 (293-353)||(7042945-7043006)
chr8 (295-348)||(11727937-11727989)
chr8 (292-353)||(32869461-32869522)
chr8 (292-397)||(42636400-42636505)
chr8 (316-364)||(32646819-32646867)
chr8 (289-369)||(37167016-37167095)
chr8 (299-358)||(13328358-13328416)
chr8 (335-398)||(24869380-24869443)
chr8 (292-394)||(25382592-25382695)
chr8 (325-398)||(11993802-11993873)
chr8 (300-394)||(12639900-12639994)
chr8 (298-368)||(42022633-42022703)
chr8 (336-401)||(7691322-7691387)
chr8 (360-397)||(9632895-9632932)
chr8 (293-394)||(25279899-25279999)
chr8 (308-369)||(39932727-39932788)
chr8 (308-373)||(45368773-45368838)
chr8 (322-398)||(1369923-1369999)
chr8 (294-369)||(1502706-1502782)
chr8 (345-397)||(7262109-7262161)
chr8 (302-366)||(11041065-11041129)
chr8 (354-398)||(18808862-18808906)
chr8 (305-369)||(25163069-25163133)
chr8 (354-394)||(28460088-28460128)
chr8 (292-352)||(28925168-28925228)
[»] chr2 (50 HSPs)
chr2 (300-397)||(3882583-3882680)
chr2 (300-398)||(2825998-2826096)
chr2 (300-394)||(18227092-18227186)
chr2 (305-398)||(6797164-6797256)
chr2 (333-398)||(24389698-24389763)
chr2 (301-369)||(33275936-33276004)
chr2 (316-395)||(45076186-45076264)
chr2 (300-398)||(31513719-31513816)
chr2 (292-397)||(32859752-32859857)
chr2 (291-395)||(11001477-11001580)
chr2 (293-396)||(13538363-13538467)
chr2 (292-372)||(44195499-44195579)
chr2 (310-369)||(16717604-16717663)
chr2 (310-398)||(35477740-35477821)
chr2 (306-397)||(42924465-42924555)
chr2 (300-394)||(6761768-6761862)
chr2 (300-370)||(8964386-8964456)
chr2 (292-397)||(19890223-19890328)
chr2 (292-397)||(20064878-20064983)
chr2 (293-398)||(25622500-25622604)
chr2 (259-369)||(39640136-39640246)
chr2 (300-368)||(27133072-27133140)
chr2 (295-398)||(1334921-1335024)
chr2 (310-397)||(8773725-8773812)
chr2 (310-397)||(18053069-18053156)
chr2 (315-366)||(29865829-29865880)
chr2 (292-370)||(3199522-3199600)
chr2 (318-396)||(11742165-11742242)
chr2 (308-393)||(4238375-4238459)
chr2 (296-369)||(14663218-14663291)
chr2 (300-397)||(18223081-18223178)
chr2 (310-395)||(20683049-20683134)
chr2 (350-395)||(36480369-36480414)
chr2 (336-396)||(2769324-2769383)
chr2 (300-372)||(10204149-10204221)
chr2 (350-398)||(15816796-15816844)
chr2 (300-368)||(37617431-37617499)
chr2 (292-343)||(31017342-31017393)
chr2 (300-394)||(6581519-6581612)
chr2 (328-394)||(29685774-29685840)
chr2 (350-400)||(30869652-30869702)
chr2 (300-393)||(2393082-2393174)
chr2 (349-398)||(5962056-5962105)
chr2 (333-394)||(12848547-12848607)
chr2 (300-374)||(27948053-27948129)
chr2 (293-390)||(37993052-37993149)
chr2 (292-368)||(38292364-38292441)
chr2 (292-364)||(9049184-9049256)
chr2 (300-368)||(33454964-33455032)
chr2 (335-391)||(44921344-44921399)
[»] chr5 (50 HSPs)
chr5 (310-398)||(34032142-34032230)
chr5 (291-369)||(36160314-36160392)
chr5 (310-395)||(17098238-17098323)
chr5 (295-369)||(3758195-3758269)
chr5 (293-398)||(23023599-23023704)
chr5 (305-390)||(26663609-26663694)
chr5 (305-390)||(26935204-26935289)
chr5 (292-395)||(30501174-30501277)
chr5 (292-395)||(30541517-30541620)
chr5 (306-395)||(2816147-2816236)
chr5 (310-398)||(25415916-25416004)
chr5 (300-377)||(32017460-32017537)
chr5 (305-393)||(8761898-8761986)
chr5 (300-398)||(19692689-19692788)
chr5 (300-394)||(779056-779149)
chr5 (310-396)||(8247035-8247121)
chr5 (327-397)||(25437944-25438014)
chr5 (292-398)||(41583509-41583615)
chr5 (292-389)||(16161394-16161491)
chr5 (322-394)||(112550-112622)
chr5 (310-398)||(14475052-14475140)
chr5 (300-396)||(35515902-35515997)
chr5 (292-391)||(8221096-8221194)
chr5 (354-393)||(9330407-9330446)
chr5 (300-387)||(14042440-14042527)
chr5 (349-396)||(31672379-31672426)
chr5 (305-387)||(27016648-27016730)
chr5 (292-398)||(30104770-30104876)
chr5 (293-394)||(24041058-24041158)
chr5 (316-369)||(31914165-31914217)
chr5 (300-368)||(27833332-27833400)
chr5 (293-397)||(28793302-28793406)
chr5 (305-369)||(39382492-39382556)
chr5 (322-369)||(141867-141914)
chr5 (345-396)||(10410418-10410469)
chr5 (293-396)||(33590023-33590125)
chr5 (310-392)||(1354400-1354481)
chr5 (316-394)||(10051700-10051778)
chr5 (300-370)||(42265430-42265500)
chr5 (345-398)||(2977738-2977791)
chr5 (292-369)||(10145374-10145451)
chr5 (291-364)||(22873471-22873544)
chr5 (333-398)||(29342302-29342367)
chr5 (328-401)||(39177645-39177717)
chr5 (355-399)||(543966-544010)
chr5 (310-394)||(3263717-3263801)
chr5 (292-340)||(4434667-4434715)
chr5 (336-396)||(25486920-25486980)
chr5 (295-398)||(27310250-27310354)
chr5 (292-358)||(39099875-39099943)
[»] chr6 (21 HSPs)
chr6 (300-396)||(30509284-30509380)
chr6 (298-396)||(3605056-3605154)
chr6 (328-398)||(13445801-13445871)
chr6 (300-398)||(5446704-5446802)
chr6 (300-398)||(35229258-35229356)
chr6 (333-395)||(34185101-34185163)
chr6 (316-366)||(34921565-34921615)
chr6 (292-373)||(12132518-12132599)
chr6 (292-395)||(4810560-4810664)
chr6 (310-398)||(6586469-6586556)
chr6 (292-368)||(12307821-12307897)
chr6 (337-397)||(27752613-27752673)
chr6 (292-391)||(30739572-30739671)
chr6 (300-374)||(13070684-13070758)
chr6 (292-377)||(1840970-1841055)
chr6 (317-398)||(2692489-2692569)
chr6 (300-373)||(13070547-13070620)
chr6 (292-369)||(25028732-25028809)
chr6 (328-392)||(3753165-3753229)
chr6 (325-397)||(19293520-19293592)
chr6 (333-389)||(28874374-28874430)
[»] chr3 (47 HSPs)
chr3 (305-396)||(37708405-37708496)
chr3 (300-398)||(48322248-48322345)
chr3 (300-393)||(24313522-24313615)
chr3 (292-398)||(54290811-54290917)
chr3 (328-397)||(29611987-29612056)
chr3 (305-398)||(48551006-48551099)
chr3 (313-399)||(34758894-34758980)
chr3 (305-391)||(50217018-50217104)
chr3 (321-398)||(45757895-45757972)
chr3 (333-394)||(52308986-52309047)
chr3 (315-372)||(30082849-30082908)
chr3 (300-398)||(30463999-30464095)
chr3 (300-395)||(38457259-38457352)
chr3 (291-370)||(39976720-39976798)
chr3 (321-395)||(25461440-25461513)
chr3 (333-395)||(50604022-50604084)
chr3 (310-371)||(8703366-8703427)
chr3 (310-371)||(9055253-9055314)
chr3 (334-395)||(23642718-23642779)
chr3 (305-370)||(42846053-42846118)
chr3 (293-397)||(39400312-39400416)
chr3 (300-398)||(29099141-29099240)
chr3 (340-398)||(3027067-3027125)
chr3 (300-394)||(48180213-48180307)
chr3 (310-372)||(50368458-50368520)
chr3 (310-398)||(10921308-10921394)
chr3 (345-396)||(11623560-11623611)
chr3 (300-377)||(1511321-1511399)
chr3 (310-352)||(24658488-24658530)
chr3 (306-364)||(44882029-44882087)
chr3 (308-398)||(46188630-46188718)
chr3 (317-394)||(4305201-4305278)
chr3 (293-366)||(13804883-13804956)
chr3 (291-396)||(23554707-23554811)
chr3 (296-396)||(25299075-25299175)
chr3 (308-365)||(43749524-43749581)
chr3 (300-353)||(46711956-46712009)
chr3 (345-398)||(46725623-46725676)
chr3 (305-396)||(49003114-49003201)
chr3 (292-369)||(53040464-53040541)
chr3 (300-397)||(54911168-54911265)
chr3 (302-398)||(1680502-1680598)
chr3 (310-373)||(18399211-18399275)
chr3 (295-343)||(30299301-30299349)
chr3 (307-375)||(38388701-38388769)
chr3 (310-398)||(38705002-38705090)
chr3 (291-347)||(52309185-52309241)
[»] chr4 (58 HSPs)
chr4 (292-394)||(53737828-53737930)
chr4 (292-393)||(48097923-48098024)
chr4 (292-395)||(50086442-50086544)
chr4 (292-397)||(51834881-51834986)
chr4 (246-398)||(39274928-39275079)
chr4 (292-397)||(49532285-49532389)
chr4 (310-394)||(54700896-54700978)
chr4 (292-396)||(45900183-45900287)
chr4 (289-397)||(47560593-47560700)
chr4 (292-398)||(42957005-42957112)
chr4 (305-368)||(50343883-50343946)
chr4 (292-398)||(8297837-8297943)
chr4 (293-395)||(42370349-42370450)
chr4 (300-369)||(29352464-29352533)
chr4 (300-396)||(38945061-38945158)
chr4 (308-396)||(20389993-20390081)
chr4 (293-397)||(23016257-23016361)
chr4 (310-394)||(28005295-28005379)
chr4 (300-399)||(32055382-32055481)
chr4 (305-372)||(44690310-44690377)
chr4 (310-396)||(49446645-49446732)
chr4 (306-369)||(50774956-50775019)
chr4 (302-368)||(51105918-51105984)
chr4 (300-369)||(10575984-10576052)
chr4 (293-398)||(20394604-20394709)
chr4 (305-390)||(49951737-49951822)
chr4 (310-393)||(24395248-24395331)
chr4 (317-393)||(41462020-41462096)
chr4 (310-397)||(39727606-39727692)
chr4 (310-396)||(30978700-30978786)
chr4 (310-396)||(44646577-44646663)
chr4 (291-364)||(4394908-4394981)
chr4 (300-397)||(7627927-7628023)
chr4 (300-397)||(41370210-41370307)
chr4 (292-369)||(51736349-51736426)
chr4 (305-398)||(52650737-52650830)
chr4 (292-396)||(2063444-2063547)
chr4 (310-370)||(24369401-24369461)
chr4 (320-396)||(31072532-31072608)
chr4 (305-364)||(10095687-10095746)
chr4 (310-365)||(16822316-16822371)
chr4 (306-393)||(41956478-41956565)
chr4 (293-368)||(47995772-47995847)
chr4 (328-391)||(53261531-53261594)
chr4 (300-398)||(6316848-6316946)
chr4 (292-394)||(7852578-7852680)
chr4 (300-377)||(39827190-39827268)
chr4 (299-368)||(2818355-2818424)
chr4 (292-369)||(25196131-25196208)
chr4 (309-370)||(31262910-31262970)
chr4 (300-373)||(35180647-35180720)
chr4 (300-396)||(9802658-9802753)
chr4 (305-369)||(37179686-37179750)
chr4 (322-397)||(43956106-43956179)
chr4 (300-364)||(47247814-47247878)
chr4 (308-396)||(47937832-47937919)
chr4 (292-391)||(50341901-50341998)
chr4 (310-374)||(53919858-53919922)
[»] chr1 (62 HSPs)
chr1 (302-397)||(34861256-34861351)
chr1 (310-396)||(40570657-40570744)
chr1 (300-398)||(3047833-3047931)
chr1 (300-370)||(33744177-33744247)
chr1 (291-399)||(37705842-37705950)
chr1 (305-396)||(37976797-37976886)
chr1 (293-396)||(39150550-39150653)
chr1 (292-369)||(26687533-26687611)
chr1 (292-397)||(4771989-4772094)
chr1 (328-397)||(31807850-31807919)
chr1 (300-393)||(39973863-39973956)
chr1 (292-369)||(44442245-44442322)
chr1 (300-396)||(34445637-34445733)
chr1 (295-366)||(14774100-14774171)
chr1 (300-374)||(47031474-47031548)
chr1 (321-398)||(16113885-16113962)
chr1 (300-397)||(25302039-25302136)
chr1 (310-398)||(7549809-7549897)
chr1 (300-396)||(31042969-31043065)
chr1 (292-396)||(34232741-34232845)
chr1 (300-398)||(4521050-4521146)
chr1 (310-369)||(8836543-8836602)
chr1 (300-363)||(28672330-28672393)
chr1 (299-398)||(39912251-39912350)
chr1 (328-391)||(42573839-42573902)
chr1 (292-398)||(2864109-2864214)
chr1 (316-398)||(45584505-45584587)
chr1 (307-368)||(64875-64936)
chr1 (300-373)||(6983032-6983105)
chr1 (304-368)||(2633027-2633091)
chr1 (305-364)||(7481421-7481481)
chr1 (300-396)||(40053261-40053357)
chr1 (300-371)||(26322658-26322729)
chr1 (310-369)||(36621928-36621987)
chr1 (311-398)||(40377008-40377095)
chr1 (300-373)||(4039644-4039717)
chr1 (292-369)||(5417703-5417779)
chr1 (293-366)||(5423781-5423854)
chr1 (292-369)||(9221257-9221334)
chr1 (317-393)||(8794388-8794463)
chr1 (300-372)||(36321667-36321739)
chr1 (292-396)||(39914639-39914743)
chr1 (289-369)||(48811928-48812008)
chr1 (308-395)||(25095578-25095665)
chr1 (311-394)||(31745460-31745543)
chr1 (302-393)||(33791783-33791874)
chr1 (321-396)||(48947172-48947247)
chr1 (351-397)||(3506947-3506993)
chr1 (316-398)||(31652589-31652670)
chr1 (292-398)||(39156227-39156333)
chr1 (295-369)||(43512772-43512846)
chr1 (322-371)||(3755992-3756041)
chr1 (354-395)||(18114530-18114571)
chr1 (337-398)||(27396098-27396159)
chr1 (328-393)||(35259116-35259181)
chr1 (293-366)||(38570389-38570462)
chr1 (310-395)||(44719150-44719235)
chr1 (292-388)||(5250935-5251031)
chr1 (319-363)||(6285847-6285891)
chr1 (306-394)||(9770184-9770272)
chr1 (291-366)||(12590662-12590738)
chr1 (293-397)||(48022388-48022492)
[»] chr7 (46 HSPs)
chr7 (300-398)||(1360503-1360600)
chr7 (300-394)||(31902791-31902884)
chr7 (310-396)||(44719448-44719534)
chr7 (300-369)||(33887894-33887963)
chr7 (321-398)||(34299806-34299883)
chr7 (292-396)||(27123242-27123346)
chr7 (292-396)||(28770445-28770549)
chr7 (292-396)||(34681661-34681764)
chr7 (300-394)||(10031963-10032057)
chr7 (292-398)||(25886136-25886242)
chr7 (292-396)||(3256661-3256766)
chr7 (306-366)||(39316073-39316133)
chr7 (310-398)||(47507576-47507664)
chr7 (300-398)||(8169997-8170095)
chr7 (292-370)||(40722353-40722431)
chr7 (310-395)||(23187248-23187333)
chr7 (289-369)||(24450535-24450614)
chr7 (350-398)||(27766778-27766826)
chr7 (246-394)||(9097683-9097830)
chr7 (292-395)||(27338231-27338334)
chr7 (300-391)||(33922782-33922872)
chr7 (292-382)||(36827570-36827658)
chr7 (305-364)||(42911060-42911119)
chr7 (293-364)||(45869032-45869103)
chr7 (300-369)||(676415-676483)
chr7 (351-396)||(47754600-47754645)
chr7 (328-368)||(6392177-6392217)
chr7 (292-372)||(18926319-18926399)
chr7 (292-372)||(35567106-35567186)
chr7 (328-395)||(3267680-3267747)
chr7 (293-352)||(37129847-37129906)
chr7 (292-371)||(39321016-39321095)
chr7 (322-377)||(43224151-43224206)
chr7 (337-395)||(5907794-5907851)
chr7 (292-398)||(22688985-22689089)
chr7 (327-369)||(28733827-28733869)
chr7 (300-398)||(35496615-35496713)
chr7 (293-395)||(35599837-35599939)
chr7 (295-396)||(36973304-36973406)
chr7 (292-366)||(37352445-37352519)
chr7 (300-396)||(17157811-17157908)
chr7 (333-370)||(43492277-43492314)
chr7 (354-398)||(17302857-17302901)
chr7 (300-372)||(26402824-26402896)
chr7 (336-396)||(32829094-32829154)
chr7 (305-397)||(36015052-36015144)
[»] scaffold0009 (1 HSPs)
scaffold0009 (292-369)||(189064-189141)
[»] scaffold0018 (1 HSPs)
scaffold0018 (302-393)||(138072-138163)
[»] scaffold0036 (1 HSPs)
scaffold0036 (293-396)||(62560-62663)
[»] scaffold0011 (1 HSPs)
scaffold0011 (293-366)||(219188-219261)
[»] scaffold0010 (1 HSPs)
scaffold0010 (305-393)||(26673-26760)
[»] scaffold0291 (1 HSPs)
scaffold0291 (310-369)||(11716-11775)
[»] scaffold0113 (1 HSPs)
scaffold0113 (304-394)||(13910-13997)
[»] scaffold1681 (1 HSPs)
scaffold1681 (316-369)||(672-725)
[»] scaffold0192 (1 HSPs)
scaffold0192 (300-369)||(15937-16006)
[»] scaffold0121 (1 HSPs)
scaffold0121 (293-398)||(28810-28915)
[»] scaffold0419 (1 HSPs)
scaffold0419 (333-389)||(1040-1096)


Alignment Details
Target: chr8 (Bit Score: 318; Significance: 1e-179; HSPs: 62)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 11 - 398
Target Start/End: Original strand, 20279308 - 20279695
Alignment:
Q  11 cacagaaatgagtgaaattttttagatatacacctctccccttaagcaacctgtgaataaaatccattgaagttttaaactatacctgtgattctatgga 110  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20279308 cacagaaatgagtgaaattttttagatatccacctctcaccttaagcaacctgtgaataaaatccattgaagttttaaactatacctgtgattctatgga 20279407  T
Q  111 gtttgtagcggccgtaataagcttgcaaatgatgagctttcgttatttgttctgatggcaaatactgcacttggcaataaatttcttgatttcagtcttt 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20279408 gtttgtagcggccgtaataagcttgcaaatgatgagctttcgttatttgttctgatggcaaatactgcacttggcaataaatttcttgatttcagtcttt 20279507  T
Q  211 ataccttccgagtnnnnnnncagttgaaatcctcaggggcattagttaaagaccataagtggtaggtatttnnnnnnntgcgtgtatttaatgtattgaa 310  Q
    ||||||||| |||       ||||||||||||||||||||||||||||||||||||||||||||  |||||       ||||||||||||||||||||||    
T  20279508 ataccttcccagtaaaaaaacagttgaaatcctcaggggcattagttaaagaccataagtggtaaatatttaaaaaaatgcgtgtatttaatgtattgaa 20279607  T
Q  311 aatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccctt 398  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  20279608 aattgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccgggggcacttgttaacaagaccctt 20279695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 11 - 398
Target Start/End: Original strand, 21065935 - 21066322
Alignment:
Q  11 cacagaaatgagtgaaattttttagatatacacctctccccttaagcaacctgtgaataaaatccattgaagttttaaactatacctgtgattctatgga 110  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21065935 cacagaaatgagtgaaattttttagatatccacctctcaccttaagcaacctgtgaataaaatccattgaagttttaaactatacctgtgattctatgga 21066034  T
Q  111 gtttgtagcggccgtaataagcttgcaaatgatgagctttcgttatttgttctgatggcaaatactgcacttggcaataaatttcttgatttcagtcttt 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21066035 gtttgtagcggccgtaataagcttgcaaatgatgagctttcgttatttgttctgatggcaaatactgcacttggcaataaatttcttgatttcagtcttt 21066134  T
Q  211 ataccttccgagtnnnnnnncagttgaaatcctcaggggcattagttaaagaccataagtggtaggtatttnnnnnnntgcgtgtatttaatgtattgaa 310  Q
    ||||||||| |||       ||||||||||||||||||||||||||||||||||||||||||||  |||||       ||||||||||||||||||||||    
T  21066135 ataccttcccagtaaaaaaacagttgaaatcctcaggggcattagttaaagaccataagtggtaaatatttaaaaaaatgcgtgtatttaatgtattgaa 21066234  T
Q  311 aatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccctt 398  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  21066235 aattgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccgggggcacttgttaacaagaccctt 21066322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 300 - 398
Target Start/End: Complemental strand, 22209470 - 22209372
Alignment:
Q  300 aatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccctt 398  Q
    ||||| ||| ||||| |||||||| ||||||| || |||||||||||| ||||| ||||||||||||||| ||||| |||||||||||| |||||||||    
T  22209470 aatgtcttggaaatcaaaatatttaacttttttaaggaataattgcttcttttaaaatgcttaaagagtgtcccggagacacttgttaataagaccctt 22209372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 298 - 394
Target Start/End: Complemental strand, 9460524 - 9460428
Alignment:
Q  298 ttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagac 394  Q
    |||||||||||||||||||||| ||||||||||  ||||||||||||||| |||| | |||||||| ||||||||  ||| |||| |||||||||||    
T  9460524 ttaatgtattgaaaatcgaaatgtttgacttttctaaagaataattgcttgttttggtatgcttaacgagtgccctcggggcactcgttaacaagac 9460428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 300 - 396
Target Start/End: Original strand, 36348531 - 36348627
Alignment:
Q  300 aatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccc 396  Q
    |||| |||||||||| |||| ||| ||||||| ||||||||||||||||||||||  |||||||| |||||||||| |||| | |||||||||||||    
T  36348531 aatgcattgaaaatcaaaatgtttaacttttttaaagaataattgcttattttagtgtgcttaaaaagtgccccggagacattcgttaacaagaccc 36348627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 289 - 398
Target Start/End: Complemental strand, 39093160 - 39093050
Alignment:
Q  289 tgcgtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttat-tttagaatgcttaaagagtgccccggggacacttgtta 387  Q
    |||||||| | |||| |||| || ||||||||||  ||||||| ||||||||||||||| | ||| | ||||||||||||| ||||||||||||| ||||    
T  39093160 tgcgtgtaatcaatgcattggaactcgaaatattatacttttttaaagaataattgcttttgtttggtatgcttaaagagtaccccggggacactcgtta 39093061  T
Q  388 acaagaccctt 398  Q
    |||||||||||    
T  39093060 acaagaccctt 39093050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 305 - 398
Target Start/End: Complemental strand, 12782836 - 12782743
Alignment:
Q  305 attgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccctt 398  Q
    |||| |||||||||||||  ||||||| ||||||||||||| |||||||| ||||||||||||||  |||| |||| | |||||||||||||||    
T  12782836 attggaaatcgaaatattcaacttttttaaagaataattgcatattttagtatgcttaaagagtgttccggagacattcgttaacaagaccctt 12782743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 300 - 394
Target Start/End: Original strand, 7513337 - 7513431
Alignment:
Q  300 aatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagac 394  Q
    |||| ||||||||||||||| ||| | ||||  ||||||||||||||| ||||   ||||||||||||||||||||| ||||| |||||||||||    
T  7513337 aatgcattgaaaatcgaaatgtttaatttttctaaagaataattgcttgttttgatatgcttaaagagtgccccgggaacactcgttaacaagac 7513431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 292 - 394
Target Start/End: Complemental strand, 42801150 - 42801049
Alignment:
Q  292 gtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaa 391  Q
    ||||| |||||| ||||||||| |||||||||| |||||  ||||||||||| ||||||||||||| |||||| |||| | ||||| |||| ||||||||    
T  42801150 gtgtaattaatgcattgaaaattgaaatatttgccttttgtaaagaataattacttattttagaatacttaaaaagtgtcacgggg-cactcgttaacaa 42801052  T
Q  392 gac 394  Q
    |||    
T  42801051 gac 42801049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 321 - 398
Target Start/End: Original strand, 1876545 - 1876622
Alignment:
Q  321 tttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccctt 398  Q
    |||||| |||| ||||||||||| |||| ||||| |||||||||||||||||||||| |||| |||||||||| ||||    
T  1876545 tttgacattttaaaagaataattacttaatttagcatgcttaaagagtgccccgggggcactcgttaacaagaacctt 1876622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 293 - 390
Target Start/End: Complemental strand, 36924106 - 36924009
Alignment:
Q  293 tgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaaca 390  Q
    |||| ||||||| ||| |||||||||||||||||||||| ||||||||||| ||| |||| ||  ||||||||||| |||||||  |||| |||||||    
T  36924106 tgtaattaatgttttggaaatcgaaatatttgacttttttaaagaataatttcttgtttttgatagcttaaagagtaccccgggagcactcgttaaca 36924009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 298 - 397
Target Start/End: Complemental strand, 11077985 - 11077886
Alignment:
Q  298 ttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccct 397  Q
    ||||||||| | |||||||||  ||||| ||||| ||||||||||||||| |||| | |||| ||||||||||  | ||| |||||||||||||||||||    
T  11077985 ttaatgtataggaaatcgaaaagtttgaattttttaaagaataattgcttgttttggtatgcataaagagtgcatctggggcacttgttaacaagaccct 11077886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 300 - 393
Target Start/End: Original strand, 7528269 - 7528360
Alignment:
Q  300 aatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaaga 393  Q
    ||||||||| ||||||||||||||||||||   ||||||||||| ||||||||| |||||||||| |||| | |  ||||||| ||||||||||    
T  7528269 aatgtattggaaatcgaaatatttgactttcgtaaagaataattacttattttaaaatgcttaaaaagtgtcac--ggacactcgttaacaaga 7528360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 292 - 394
Target Start/End: Original strand, 37564366 - 37564468
Alignment:
Q  292 gtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaa 391  Q
    |||||||||||  |||| |||| ||| ||||||||||||| ||||||||||| |||| ||||| ||| |||||||||| ||| | | |||| ||||||||    
T  37564366 gtgtatttaatacattggaaattgaactatttgacttttttaaagaataatttcttaatttagcatgtttaaagagtgtcccagaggcactcgttaacaa 37564465  T
Q  392 gac 394  Q
    |||    
T  37564466 gac 37564468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 292 - 397
Target Start/End: Complemental strand, 31265069 - 31264964
Alignment:
Q  292 gtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaa 391  Q
    |||||||||||  |||| |||| ||| | ||||||||||| ||||||||| | | || ||||| |||||||||||||||| | ||| |||| ||||||||    
T  31265069 gtgtatttaatacattggaaattgaattgtttgacttttttaaagaataacttcctaatttagcatgcttaaagagtgccacaggggcactcgttaacaa 31264970  T
Q  392 gaccct 397  Q
    ||||||    
T  31264969 gaccct 31264964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 305 - 394
Target Start/End: Complemental strand, 41385324 - 41385235
Alignment:
Q  305 attgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagac 394  Q
    ||||||||| |||| || ||||||| | || |||||||| |||||||| || |||||||||| |||| |||||||||| |||||||||||    
T  41385324 attgaaaattgaaacatctgactttcttaaggaataatttcttattttggattgcttaaagaatgcctcggggacactcgttaacaagac 41385235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 300 - 396
Target Start/End: Original strand, 27801268 - 27801364
Alignment:
Q  300 aatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccc 396  Q
    |||| ||||||||| | |||| |||||||||| ||||||||||| || | ||||||||| |||||||||| |  |||| |||| |||||||||||||    
T  27801268 aatgcattgaaaattgtaatagttgactttttaaaagaataattactaaatttagaatgattaaagagtgtcatgggggcactcgttaacaagaccc 27801364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 292 - 396
Target Start/End: Original strand, 39691148 - 39691252
Alignment:
Q  292 gtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaa 391  Q
    ||||||| |||| ||||||||| ||| ||||||||||||| |||||||||||  ||| | | |||||||||||||||| | || || |||| ||||||||    
T  39691148 gtgtattcaatgcattgaaaattgaactatttgacttttttaaagaataattttttaatgtggaatgcttaaagagtgtctcgagggcactcgttaacaa 39691247  T
Q  392 gaccc 396  Q
     ||||    
T  39691248 aaccc 39691252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 310 - 369
Target Start/End: Original strand, 24103103 - 24103162
Alignment:
Q  310 aaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtg 369  Q
    ||||||||| ||||||| |||| ||| ||||||| |||||||||||||||||||||||||    
T  24103103 aaatcgaaacatttgaccttttaaaaaaataatttcttattttagaatgcttaaagagtg 24103162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 309 - 374
Target Start/End: Original strand, 8108298 - 8108364
Alignment:
Q  309 aaaatcgaaatatttgactttttgaaagaataa-ttgcttattttagaatgcttaaagagtgccccg 374  Q
    |||||| |||||||| ||||||| || |||||| ||| |||||||||||||||||||||||||||||    
T  8108298 aaaatcaaaatatttaacttttttaatgaataacttgtttattttagaatgcttaaagagtgccccg 8108364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 292 - 398
Target Start/End: Complemental strand, 28207696 - 28207590
Alignment:
Q  292 gtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaa 391  Q
    ||||||| |||| |||| |||| | |||| |||||||||| ||||||| |||| | | ||| | |||||||||||||| | ||||| |||| ||||||||    
T  28207696 gtgtattgaatgcattggaaattgtaatagttgactttttaaaagaattattgttaaatttgggatgcttaaagagtgtctcgggggcactcgttaacaa 28207597  T
Q  392 gaccctt 398  Q
    |||||||    
T  28207596 gaccctt 28207590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 291 - 360
Target Start/End: Original strand, 1576395 - 1576464
Alignment:
Q  291 cgtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgct 360  Q
    |||||||| |||| |||||||||||||||||||   ||||| | |||||||||| |||||||||||||||    
T  1576395 cgtgtattcaatgcattgaaaatcgaaatatttattttttttacagaataattgtttattttagaatgct 1576464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 337 - 398
Target Start/End: Complemental strand, 5687317 - 5687256
Alignment:
Q  337 aataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccctt 398  Q
    ||||||| |||| |||| |||||||||||||||  ||||||||||| |||||||||||||||    
T  5687317 aataattacttaatttacaatgcttaaagagtgtaccggggacactcgttaacaagaccctt 5687256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 300 - 396
Target Start/End: Original strand, 16723237 - 16723333
Alignment:
Q  300 aatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccc 396  Q
    |||||||||||||| | | || |||| ||||| ||||||||||| |  | ||| | ||||||||||||||||| |||| |||| |||||||||||||    
T  16723237 aatgtattgaaaattgtattagttgattttttaaaagaataattacaaaatttgggatgcttaaagagtgccctggggtcactcgttaacaagaccc 16723333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 300 - 396
Target Start/End: Complemental strand, 30535082 - 30534986
Alignment:
Q  300 aatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccc 396  Q
    |||| ||||||||| |||| |||||| ||||| |  |||||||| ||  |||||||||||||||||||| | || | |||||| |||||||||||||    
T  30535082 aatgcattgaaaattgaaacatttgatttttttatggaataatttctccttttagaatgcttaaagagtactccagagacactcgttaacaagaccc 30534986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 310 - 370
Target Start/End: Original strand, 39333551 - 39333611
Alignment:
Q  310 aaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgc 370  Q
    |||||||||| |||||||||||  ||||||||||||||||||||||  |||||| ||||||    
T  39333551 aaatcgaaatgtttgacttttttgaagaataattgcttattttagatagcttaaggagtgc 39333611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 336 - 396
Target Start/End: Complemental strand, 40298909 - 40298849
Alignment:
Q  336 gaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccc 396  Q
    |||||||||||||||||| ||||||||||||||| |   |||||||| |||||||||||||    
T  40298909 gaataattgcttattttataatgcttaaagagtgtcatagggacactcgttaacaagaccc 40298849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 306 - 369
Target Start/End: Original strand, 2445172 - 2445235
Alignment:
Q  306 ttgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtg 369  Q
    |||||||||||||||||| ||||||  ||| ||||||||||||||||| |||| ||||| ||||    
T  2445172 ttgaaaatcgaaatatttaacttttaaaaaaaataattgcttattttaaaatgattaaaaagtg 2445235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 292 - 391
Target Start/End: Complemental strand, 13028201 - 13028103
Alignment:
Q  292 gtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaa 391  Q
    ||||||| | || ||||||||| | |||| | || ||||| |||||||||||| | | |||||||||||||||||||||| ||||| |||| ||||||||    
T  13028201 gtgtattgagtgcattgaaaattgtaataatagattttttaaaagaataattgataaatttagaatgcttaaagagtgcctcgggg-cactcgttaacaa 13028103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 291 - 370
Target Start/End: Original strand, 15352104 - 15352182
Alignment:
Q  291 cgtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgc 370  Q
    ||||||||||||| |||| |||| ||| ||||||||||||| | |||||||||  ||| ||||||||| |||||||||||    
T  15352104 cgtgtatttaatg-attggaaattgaactatttgacttttttacagaataattttttaatttagaatgtttaaagagtgc 15352182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 309 - 391
Target Start/End: Original strand, 5293795 - 5293877
Alignment:
Q  309 aaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaa 391  Q
    |||||| |||||||| ||||||  |||||| |||| ||||||||| |||||||||||| ||| |||| | |||| ||||||||    
T  5293795 aaaatcaaaatatttaacttttataaagaacaattacttattttaaaatgcttaaagactgctccggaggcactcgttaacaa 5293877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 309 - 398
Target Start/End: Original strand, 7044382 - 7044469
Alignment:
Q  309 aaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccctt 398  Q
    ||||||||||| ||||||||||| | | | ||||| ||| ||||||||| |||||||||||||| |||  |||| |||||||| ||||||    
T  7044382 aaaatcgaaatgtttgactttttaataaattaatttcttcttttagaatccttaaagagtgcccaggg--cactcgttaacaaaaccctt 7044469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 394
Target Start/End: Complemental strand, 12002303 - 12002237
Alignment:
Q  328 ttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagac 394  Q
    |||| ||||||||||| |||| ||||| || |||||||||||||||| ||| ||| |||||||||||    
T  12002303 tttttaaagaataattacttaatttagtatacttaaagagtgccccgaggatactcgttaacaagac 12002237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 398
Target Start/End: Original strand, 14016937 - 14017007
Alignment:
Q  328 ttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccctt 398  Q
    |||||||||||| ||| |||  ||||| |||||||||||||||||||| | |||| |||||||||| ||||    
T  14016937 ttttgaaagaatcattactttatttagcatgcttaaagagtgccccggaggcactagttaacaagaacctt 14017007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 292 - 393
Target Start/End: Original strand, 29487093 - 29487195
Alignment:
Q  292 gtgtatttaatgtattgaaaatcgaaatatttga-ctttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaaca 390  Q
    ||||||| |||| ||||||||| ||| ||||| | |||||| ||||||||||| |||| ||||||||  | ||||||||||| ||  ||||| |||||||    
T  29487093 gtgtattaaatgcattgaaaattgaactatttaaacttttttaaagaataatttcttaatttagaatattaaaagagtgccctggaaacactcgttaaca 29487192  T
Q  391 aga 393  Q
    |||    
T  29487193 aga 29487195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 395
Target Start/End: Original strand, 31844281 - 31844354
Alignment:
Q  321 tttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagacc 395  Q
    ||||||||||| || |||||||| |||| ||||||||  ||||||||||||| |||| |||| ||||||||||||    
T  31844281 tttgacttttttaaggaataattacttaatttagaatatttaaagagtgccctgggg-cactcgttaacaagacc 31844354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 337 - 394
Target Start/End: Original strand, 5968380 - 5968437
Alignment:
Q  337 aataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagac 394  Q
    ||||||||||| |||||||||| ||||||||||||| || | |||| |||||||||||    
T  5968380 aataattgcttgttttagaatgtttaaagagtgccctggaggcactcgttaacaagac 5968437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 293 - 353
Target Start/End: Complemental strand, 7043006 - 7042945
Alignment:
Q  293 tgtatttaatgtattgaaaatcgaaatatttgact-ttttgaaagaataattgcttatttta 353  Q
    |||||| ||||| ||| |||||||||||||||||| |||| |||| ||||||||||||||||    
T  7043006 tgtattcaatgtcttggaaatcgaaatatttgacttttttaaaaggataattgcttatttta 7042945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 295 - 348
Target Start/End: Original strand, 11727937 - 11727989
Alignment:
Q  295 tatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgctta 348  Q
    ||||||||||||||||||| ||| ||||||||||||| ||||||||||| ||||    
T  11727937 tatttaatgtattgaaaattgaagtatttgacttttt-aaagaataatttctta 11727989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 292 - 353
Target Start/End: Complemental strand, 32869522 - 32869461
Alignment:
Q  292 gtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttatttta 353  Q
    ||||||| |||||| |||||||| |||||||  ||||||| ||||||||||| |||||||||    
T  32869522 gtgtattcaatgtactgaaaatcaaaatattaaactttttaaaagaataattacttatttta 32869461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 292 - 397
Target Start/End: Original strand, 42636400 - 42636505
Alignment:
Q  292 gtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaa 391  Q
    ||||||| |||| |||| |||| | |||| ||||||||||  || ||||||| || | ||| | |||||||||||||||||||||  ||||  |||||||    
T  42636400 gtgtattaaatgcattgtaaattgtaatagttgacttttttgaataataattactaaatttgggatgcttaaagagtgccccgggagcactccttaacaa 42636499  T
Q  392 gaccct 397  Q
    ||||||    
T  42636500 gaccct 42636505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 316 - 364
Target Start/End: Complemental strand, 32646867 - 32646819
Alignment:
Q  316 aaatatttgactttttgaaagaataattgcttattttagaatgcttaaa 364  Q
    |||||||||||||||| |||||||||||| |||||||| |||| |||||    
T  32646867 aaatatttgactttttaaaagaataattgtttattttaaaatgtttaaa 32646819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 369
Target Start/End: Complemental strand, 37167095 - 37167016
Alignment:
Q  289 tgcgtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtg 369  Q
    |||||||||| |||| |||| |||||||| ||||| | |||||||| ||||||||| |||||||  |||| ||||||||||    
T  37167095 tgcgtgtattcaatgcattggaaatcgaactatttaattttttgaa-gaataattgtttattttgaaatgtttaaagagtg 37167016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 299 - 358
Target Start/End: Original strand, 13328358 - 13328416
Alignment:
Q  299 taatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatg 358  Q
    ||||||||||||||| ||||||||| || |||| |||||||||||| |||||||| ||||    
T  13328358 taatgtattgaaaattgaaatatttaacatttt-aaagaataattgtttattttaaaatg 13328416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 335 - 398
Target Start/End: Complemental strand, 24869443 - 24869380
Alignment:
Q  335 agaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccctt 398  Q
    ||||||||| |||| ||||| ||| |||||||||||| | ||| |||| |||||||||||||||    
T  24869443 agaataattacttaatttagcatgtttaaagagtgccacaggggcactcgttaacaagaccctt 24869380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 292 - 394
Target Start/End: Complemental strand, 25382695 - 25382592
Alignment:
Q  292 gtgtatttaatgtattgaaaatcgaaatatttgactttttg-aaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaaca 390  Q
    |||||||||||| |||| |||| | | ||||| |||||||  ||||||||||| |||| ||| ||||||||||| | |||  ||||| |||| |||||||    
T  25382695 gtgtatttaatgcattggaaattggactattttactttttttaaagaataatttcttaatttggaatgcttaaaaaatgcttcgggggcactcgttaaca 25382596  T
Q  391 agac 394  Q
    ||||    
T  25382595 agac 25382592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 398
Target Start/End: Complemental strand, 11993873 - 11993802
Alignment:
Q  325 actttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccctt 398  Q
    ||||||| ||||||||||||||| |||| | |||||||||||||| ||  ||| ||||  ||||||||||||||    
T  11993873 acttttttaaagaataattgcttgtttttgtatgcttaaagagtgtcc--ggggcactcattaacaagaccctt 11993802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 300 - 394
Target Start/End: Complemental strand, 12639994 - 12639900
Alignment:
Q  300 aatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagac 394  Q
    ||||| |||||||||||| ||||| ||||||| ||  | ||||| | || ||||||||||||||| ||||  |||| | |||| |||||||||||    
T  12639994 aatgttttgaaaatcgaattatttaacttttttaataattaatttcctaatttagaatgcttaaaaagtgttccggaggcactcgttaacaagac 12639900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 298 - 368
Target Start/End: Original strand, 42022633 - 42022703
Alignment:
Q  298 ttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagt 368  Q
    |||| |||||| |||| ||| ||||||||||||| ||| |||||||  ||| |||| ||||||||||||||    
T  42022633 ttaacgtattggaaattgaactatttgacttttttaaaaaataattttttaatttaaaatgcttaaagagt 42022703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 401
Target Start/End: Complemental strand, 7691387 - 7691322
Alignment:
Q  336 gaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagacccttgat 401  Q
    |||||||| ||| ||||| |||||||||||||||| || | |||||| |||||||| |||| ||||    
T  7691387 gaataatttcttcttttaaaatgcttaaagagtgctcccgagacactcgttaacaaaacccatgat 7691322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 360 - 397
Target Start/End: Complemental strand, 9632932 - 9632895
Alignment:
Q  360 ttaaagagtgccccggggacacttgttaacaagaccct 397  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  9632932 ttaaagagtgacccggagacacttgttaacaagaccct 9632895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 394
Target Start/End: Complemental strand, 25279999 - 25279899
Alignment:
Q  293 tgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaag 392  Q
    ||||||||||  |||| |||| ||| ||||||||||||| ||||||||| | | || ||||| |||||||||||||| |   ||| |||| |||||||||    
T  25279999 tgtatttaatacattggaaattgaattatttgacttttt-aaagaataacttcctaatttagcatgcttaaagagtgtcgtaggggcactcgttaacaag 25279901  T
Q  393 ac 394  Q
    ||    
T  25279900 ac 25279899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 369
Target Start/End: Original strand, 39932727 - 39932788
Alignment:
Q  308 gaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtg 369  Q
    |||||| ||||||||||||||||| |  |||| ||| ||| |||||||||| ||||||||||    
T  39932727 gaaaattgaaatatttgacttttttatggaattattacttcttttagaatgtttaaagagtg 39932788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 373
Target Start/End: Original strand, 45368773 - 45368838
Alignment:
Q  308 gaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgcccc 373  Q
    |||||| ||||||||| ||||||| | | ||||||| ||| |||| |||| |||||||||||||||    
T  45368773 gaaaattgaaatatttaacttttttataaaataatttctttttttggaatccttaaagagtgcccc 45368838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 322 - 398
Target Start/End: Original strand, 1369923 - 1369999
Alignment:
Q  322 ttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccctt 398  Q
    |||||||||| |||||||||||||| | ||||| ||||||||| | ||   ||| |||||| ||||| |||||||||    
T  1369923 ttgactttttaaaagaataattgctaaatttaggatgcttaaataatgtatcggagacactcgttaataagaccctt 1369999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 294 - 369
Target Start/End: Original strand, 1502706 - 1502782
Alignment:
Q  294 gtatttaatgtattgaaaatcgaaatatttgactttttg-aaagaataattgcttattttagaatgcttaaagagtg 369  Q
    |||||||||| ||||||||| ||| | ||||| |||||  ||||||||||| | || ||||||||| ||||||||||    
T  1502706 gtatttaatgcattgaaaattgaactgtttgaatttttttaaagaataatttcctaatttagaatgtttaaagagtg 1502782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 345 - 397
Target Start/End: Original strand, 7262109 - 7262161
Alignment:
Q  345 cttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccct 397  Q
    ||||||||  ||| |||||||||||||| |||| |||| ||||||||||||||    
T  7262109 cttattttgtaatccttaaagagtgccctgggggcactcgttaacaagaccct 7262161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 302 - 366
Target Start/End: Complemental strand, 11041129 - 11041065
Alignment:
Q  302 tgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaaga 366  Q
    |||||||||||| ||||||||| ||||||| |  |||| ||| || |||||| ||||||||||||    
T  11041129 tgtattgaaaattgaaatatttaacttttttatggaatgatttctcattttaaaatgcttaaaga 11041065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 354 - 398
Target Start/End: Original strand, 18808862 - 18808906
Alignment:
Q  354 gaatgcttaaagagtgccccggggacacttgttaacaagaccctt 398  Q
    ||||| |||||||||||||||||  |||| |||||||||||||||    
T  18808862 gaatgtttaaagagtgccccgggagcactcgttaacaagaccctt 18808906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 305 - 369
Target Start/End: Original strand, 25163069 - 25163133
Alignment:
Q  305 attgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtg 369  Q
    |||| |||| |||||||||||||||||  ||||||||||  ||| ||| |||| |||||||||||    
T  25163069 attggaaattgaaatatttgactttttctaagaataattttttaattttgaatacttaaagagtg 25163133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 354 - 394
Target Start/End: Original strand, 28460088 - 28460128
Alignment:
Q  354 gaatgcttaaagagtgccccggggacacttgttaacaagac 394  Q
    |||||||||||||||||||||||  |||| |||||||||||    
T  28460088 gaatgcttaaagagtgccccgggatcactcgttaacaagac 28460128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 352
Target Start/End: Complemental strand, 28925228 - 28925168
Alignment:
Q  292 gtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttatttt 352  Q
    ||||||| |||| ||| ||||||||||||||||||||||   || |||||||| |||||||    
T  28925228 gtgtattcaatgcatttaaaatcgaaatatttgacttttcataaaaataattgtttatttt 28925168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 2e-31; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 300 - 397
Target Start/End: Complemental strand, 3882680 - 3882583
Alignment:
Q  300 aatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccct 397  Q
    |||| |||||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| || |||| ||||||||||||||    
T  3882680 aatgcattgaaaaccgaaatatttgacctttttaaagaataattgcttattttagaatgcttaaagagtgccccgagggcactcgttaacaagaccct 3882583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 300 - 398
Target Start/End: Original strand, 2825998 - 2826096
Alignment:
Q  300 aatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccctt 398  Q
    |||| |||| |||||||||||||| ||||||| ||| ||||||| |||||||||| ||||||||||||| || | |||||||| |||||||||||||||    
T  2825998 aatgcattggaaatcgaaatattttacttttttaaaaaataatttcttattttagtatgcttaaagagtaccacagggacactcgttaacaagaccctt 2826096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 300 - 394
Target Start/End: Complemental strand, 18227186 - 18227092
Alignment:
Q  300 aatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagac 394  Q
    |||| ||||||||||||||||||||||||||   |||||||||| ||||||||| |||| ||||||||||  |||| |||||| |||||||||||    
T  18227186 aatgcattgaaaatcgaaatatttgacttttatgaagaataattacttattttataatgtttaaagagtgttccggagacactcgttaacaagac 18227092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 305 - 398
Target Start/End: Complemental strand, 6797256 - 6797164
Alignment:
Q  305 attgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccctt 398  Q
    |||||||| | |||||||||||||||| |||  ||||||| ||||||||| ||| |||||||||| |||||||||| | |||||||||||||||    
T  6797256 attgaaaaacaaaatatttgacttttttaaatgataattgattattttagtatgtttaaagagtgtcccggggaca-tcgttaacaagaccctt 6797164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 333 - 398
Target Start/End: Original strand, 24389698 - 24389763
Alignment:
Q  333 aaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccctt 398  Q
    ||||||||||| |||| ||||| ||||||||||||||||||| ||| |||||||||||||||||||    
T  24389698 aaagaataattacttaatttagcatgcttaaagagtgccccgtggatacttgttaacaagaccctt 24389763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 301 - 369
Target Start/End: Original strand, 33275936 - 33276004
Alignment:
Q  301 atgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtg 369  Q
    ||||||||||||| ||||||||| ||||||| ||| ||||||| ||| |||||||||||||||||||||    
T  33275936 atgtattgaaaattgaaatatttaacttttttaaaaaataatttcttgttttagaatgcttaaagagtg 33276004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 316 - 395
Target Start/End: Original strand, 45076186 - 45076264
Alignment:
Q  316 aaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagacc 395  Q
    |||||||| ||||||| |||||||||||||||||||||| ||| |||||||||||| | |||||||| ||||| ||||||    
T  45076186 aaatatttaacttttttaaagaataattgcttattttagtatgtttaaagagtgcctc-gggacactcgttaataagacc 45076264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 300 - 398
Target Start/End: Complemental strand, 31513816 - 31513719
Alignment:
Q  300 aatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccctt 398  Q
    |||| |||| ||||||||| |||| | |||||  || ||||||| |||||||||||| |||||||||||||||||| |||||| | |||||||||||||    
T  31513816 aatgcattggaaatcgaaacatttaaatttttataaaaataatt-cttattttagaaagcttaaagagtgccccggagacactcgctaacaagaccctt 31513719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 292 - 397
Target Start/End: Complemental strand, 32859857 - 32859752
Alignment:
Q  292 gtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaa 391  Q
    |||||||||||  |||| |||| ||| | ||||||||||| ||||||||| | | || ||||| ||| ||||||||||||| |||| |||| ||||||||    
T  32859857 gtgtatttaatacattggaaattgaactgtttgacttttttaaagaataacttcctaatttagcatgtttaaagagtgccctgggggcactcgttaacaa 32859758  T
Q  392 gaccct 397  Q
    ||||||    
T  32859757 gaccct 32859752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 291 - 395
Target Start/End: Original strand, 11001477 - 11001580
Alignment:
Q  291 cgtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaaca 390  Q
    |||||| ||||| ||||||||||||||| |||||||||||| ||| ||||||||||||||||| |||| || ||| |||  | |  |||||| |||||||    
T  11001477 cgtgtaattaatatattgaaaatcgaaacatttgacttttt-aaaaaataattgcttattttaaaatgtttgaagtgtgttcggaagacactcgttaaca 11001575  T
Q  391 agacc 395  Q
    |||||    
T  11001576 agacc 11001580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 293 - 396
Target Start/End: Complemental strand, 13538467 - 13538363
Alignment:
Q  293 tgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccc-cggggacacttgttaacaa 391  Q
    |||||| |||| |||| |||| ||| ||||||| ||||| |||||||||||   || ||||| ||||||||||||||||| ||||| |||| ||||||||    
T  13538467 tgtattcaatgcattggaaattgaattatttgaattttttaaagaataattttctaatttagtatgcttaaagagtgccctcgggggcactcgttaacaa 13538368  T
Q  392 gaccc 396  Q
    |||||    
T  13538367 gaccc 13538363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 292 - 372
Target Start/End: Complemental strand, 44195579 - 44195499
Alignment:
Q  292 gtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccc 372  Q
    |||||||||||| |||| |||| ||| ||||| ||||||  ||||||||||| |||| |||| ||||||||||||||||||    
T  44195579 gtgtatttaatgcattgtaaattgaattatttaacttttgtaaagaataatttcttaatttaaaatgcttaaagagtgccc 44195499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 310 - 369
Target Start/End: Complemental strand, 16717663 - 16717604
Alignment:
Q  310 aaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtg 369  Q
    ||||| |||||||| | ||||| ||||||||||| |||||||||||||||||||||||||    
T  16717663 aaatcaaaatatttaatttttttaaagaataattacttattttagaatgcttaaagagtg 16717604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 310 - 398
Target Start/End: Original strand, 35477740 - 35477821
Alignment:
Q  310 aaatcgaaatatttgac-tttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccctt 398  Q
    ||||||||||||||||| ||||| |||||||||||||||||||       ||||||||||||||| ||||||||| ||||||||||||||    
T  35477740 aaatcgaaatatttgactttttttaaagaataattgcttattt-------cttaaagagtgcccc-gggacacttattaacaagaccctt 35477821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 306 - 397
Target Start/End: Original strand, 42924465 - 42924555
Alignment:
Q  306 ttgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccct 397  Q
    |||||||| ||||||||||| |||||  || ||||||| ||| |||||||||||||||||||||| || | |||||| ||| ||||||||||    
T  42924465 ttgaaaattgaaatatttgattttttttaaaaataattacttcttttagaatgcttaaagagtgcacc-gagacactcgttgacaagaccct 42924555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 300 - 394
Target Start/End: Original strand, 6761768 - 6761862
Alignment:
Q  300 aatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagac 394  Q
    |||| |||| |||| ||||||||||||||||| | ||||| |||  || |||| |||||||||||||||||| |||   ||||||||||||||||    
T  6761768 aatgcattggaaattgaaatatttgacttttttatagaatgatttattcttttggaatgcttaaagagtgcctcggaagcacttgttaacaagac 6761862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 300 - 370
Target Start/End: Complemental strand, 8964456 - 8964386
Alignment:
Q  300 aatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgc 370  Q
    |||| |||| |||| ||||||||| ||||||| ||||||||||| |||| ||||||||||||||| |||||    
T  8964456 aatgcattggaaattgaaatattttacttttttaaagaataattacttaatttagaatgcttaaacagtgc 8964386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 292 - 397
Target Start/End: Original strand, 19890223 - 19890328
Alignment:
Q  292 gtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaa 391  Q
    ||||||| |||| |||| |||| | |||| |||||||||| ||||||||||| || | ||||| ||||||||| ||| ||||||  ||||| ||||||||    
T  19890223 gtgtattaaatgcattggaaattgtaatagttgactttttaaaagaataattactaaatttaggatgcttaaatagtaccccggaaacactcgttaacaa 19890322  T
Q  392 gaccct 397  Q
     |||||    
T  19890323 aaccct 19890328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 292 - 397
Target Start/End: Complemental strand, 20064983 - 20064878
Alignment:
Q  292 gtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaa 391  Q
    |||||||||||  ||||||||| | |||| |||||||||| ||||||||||| ||   ||||| || ||||||||||||||  | | |||| ||||||||    
T  20064983 gtgtatttaatacattgaaaattgtaatagttgactttttaaaagaataattactatatttaggatccttaaagagtgccctagaggcactcgttaacaa 20064884  T
Q  392 gaccct 397  Q
    ||||||    
T  20064883 gaccct 20064878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 293 - 398
Target Start/End: Complemental strand, 25622604 - 25622500
Alignment:
Q  293 tgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaag 392  Q
    |||| |||||| ||||||||| | |||||||||  |||| ||| ||||||| |||| ||||||||| |||||||||||  ||||  |||| |||||||||    
T  25622604 tgtaattaatgcattgaaaattgtaatatttgatatttttaaa-aataattacttaatttagaatgtttaaagagtgcatcgggagcactcgttaacaag 25622506  T
Q  393 accctt 398  Q
    ||||||    
T  25622505 accctt 25622500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 259 - 369
Target Start/End: Complemental strand, 39640246 - 39640136
Alignment:
Q  259 aagaccataagtggtaggtatttnnnnnnntgcgtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatg 358  Q
    ||||| |||||||||||||||||       |||||||||| ||| |||||||  | ||||||||| ||||||| ||| |||||||  |||||||  ||||    
T  39640246 aagactataagtggtaggtatttctgaaaatgcgtgtattcaatatattgaatgttgaaatatttaacttttttaaaaaataattaattattttgaaatg 39640147  T
Q  359 cttaaagagtg 369  Q
    |||||||||||    
T  39640146 cttaaagagtg 39640136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 300 - 368
Target Start/End: Complemental strand, 27133140 - 27133072
Alignment:
Q  300 aatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagt 368  Q
    |||| |||| |||||||| | | ||||||||| |||||||||||||||||||||| ||| |||||||||    
T  27133140 aatgcattggaaatcgaattgtatgacttttttaaagaataattgcttattttagtatgtttaaagagt 27133072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 295 - 398
Target Start/End: Original strand, 1334921 - 1335024
Alignment:
Q  295 tatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagac 394  Q
    |||| |||| |||| |||| | |||| |||| ||||| |||||||||||  | | ||| | |||||||||||||||||||| || ||| |||||||||||    
T  1334921 tattgaatgcattggaaattgtaatagttgatttttttaaagaataattattaaatttgggatgcttaaagagtgccccggagatactcgttaacaagac 1335020  T
Q  395 cctt 398  Q
    ||||    
T  1335021 cctt 1335024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 310 - 397
Target Start/End: Original strand, 8773725 - 8773812
Alignment:
Q  310 aaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccct 397  Q
    ||||| |||||||||||||||| | | ||||||| ||| |||||||||  ||||||||||||||| |   ||| ||||||||||||||    
T  8773725 aaatcaaaatatttgacttttttataaaataatttcttcttttagaatctttaaagagtgccccgagagtactcgttaacaagaccct 8773812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 310 - 397
Target Start/End: Original strand, 18053069 - 18053156
Alignment:
Q  310 aaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccct 397  Q
    ||||| |||||||||||||||| | | ||||||| ||| ||||  ||| ||||||||||| ||| || ||||| ||||||||||||||    
T  18053069 aaatcaaaatatttgacttttttataaaataatttcttcttttgaaatccttaaagagtgtcccaggaacactcgttaacaagaccct 18053156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 315 - 366
Target Start/End: Original strand, 29865829 - 29865880
Alignment:
Q  315 gaaatatttgactttttgaaagaataattgcttattttagaatgcttaaaga 366  Q
    |||||||| |||||||| ||||||||||| ||||||||||||| ||||||||    
T  29865829 gaaatattcgactttttaaaagaataatttcttattttagaatccttaaaga 29865880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 292 - 370
Target Start/End: Original strand, 3199522 - 3199600
Alignment:
Q  292 gtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgc 370  Q
    ||||||||| ||  ||||||||| |||||||||| ||||| | | ||||||| |||||||||||||  |||||||||||    
T  3199522 gtgtatttagtgctttgaaaatcaaaatatttgaattttttataaaataatttcttattttagaattattaaagagtgc 3199600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 396
Target Start/End: Original strand, 11742165 - 11742242
Alignment:
Q  318 atatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccc 396  Q
    |||||||||||||| | ||||||||| ||| ||||| ||| |||||| |||| |||| ||||||| |||||||||||||    
T  11742165 atatttgacttttttatagaataatttctttttttaaaatccttaaa-agtgtcccgaggacactcgttaacaagaccc 11742242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 308 - 393
Target Start/End: Original strand, 4238375 - 4238459
Alignment:
Q  308 gaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaaga 393  Q
    |||||||||||||||||| ||||| | | ||||||| ||| |||| |||| ||||||||||| ||| |||||||| ||||| ||||    
T  4238375 gaaaatcgaaatatttgatttttttataaaataatttcttctttttgaatccttaaagagtgtccc-gggacactcgttaataaga 4238459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 296 - 369
Target Start/End: Original strand, 14663218 - 14663291
Alignment:
Q  296 atttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtg 369  Q
    ||||||||||||| |||| ||| |||||||||| || |||||||||||  ||| |||| |||||||||| ||||    
T  14663218 atttaatgtattggaaattgaactatttgacttatttaaagaataattttttaatttaaaatgcttaaaaagtg 14663291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 300 - 397
Target Start/End: Complemental strand, 18223178 - 18223081
Alignment:
Q  300 aatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccct 397  Q
    |||| |||| |||| ||||||||  | ||||| ||||||||||||||| |||| | ||||||||| |||| ||||  |||||| |||||||| |||||    
T  18223178 aatgcattggaaattgaaatattctatttttttaaagaataattgcttgttttggtatgcttaaaaagtgtcccgaagacactcgttaacaaaaccct 18223081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 310 - 395
Target Start/End: Original strand, 20683049 - 20683134
Alignment:
Q  310 aaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagacc 395  Q
    |||||||||||||||| ||||| | | |||  || ||| |||| |||| ||||||||||| ||||||| |||| ||||||||||||    
T  20683049 aaatcgaaatatttgatttttttataaaatcttttcttcttttggaatccttaaagagtgtcccgggggcactcgttaacaagacc 20683134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 350 - 395
Target Start/End: Complemental strand, 36480414 - 36480369
Alignment:
Q  350 tttagaatgcttaaagagtgccccggggacacttgttaacaagacc 395  Q
    |||||||||||||||||||| |||| ||||||| ||||||||||||    
T  36480414 tttagaatgcttaaagagtgtcccgaggacactcgttaacaagacc 36480369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 336 - 396
Target Start/End: Original strand, 2769324 - 2769383
Alignment:
Q  336 gaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccc 396  Q
    |||||||| ||  |||| |||||||||||||||||||||||| |||| |||||||||||||    
T  2769324 gaataatttctcctttttgaatgcttaaagagtgccccgggg-cactcgttaacaagaccc 2769383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 372
Target Start/End: Complemental strand, 10204221 - 10204149
Alignment:
Q  300 aatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccc 372  Q
    |||| |||||||||||||| |||||| |||||  ||||||||||  |||||||  |||| |||||||||||||    
T  10204221 aatgcattgaaaatcgaaacatttgaattttttgaagaataattatttattttgtaatggttaaagagtgccc 10204149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 350 - 398
Target Start/End: Original strand, 15816796 - 15816844
Alignment:
Q  350 tttagaatgcttaaagagtgccccggggacacttgttaacaagaccctt 398  Q
    ||||| ||||||||||||||||| |||| |||| |||||||||||||||    
T  15816796 tttagtatgcttaaagagtgccctgggggcactcgttaacaagaccctt 15816844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 368
Target Start/End: Original strand, 37617431 - 37617499
Alignment:
Q  300 aatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagt 368  Q
    ||||||||| ||||  |||||||| | ||||| |||||||||||  |||||||| ||||||||||||||    
T  37617431 aatgtattggaaataaaaatatttaatttttttaaagaataattatttattttaaaatgcttaaagagt 37617499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 292 - 343
Target Start/End: Original strand, 31017342 - 31017393
Alignment:
Q  292 gtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataatt 343  Q
    ||||||| |||| |||||||||  |||||||||||||||| |||||||||||    
T  31017342 gtgtattaaatgcattgaaaattaaaatatttgacttttttaaagaataatt 31017393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 300 - 394
Target Start/End: Complemental strand, 6581612 - 6581519
Alignment:
Q  300 aatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagac 394  Q
    |||| ||||| |||| ||| |||||| ||||| ||| ||| ||| ||||||||| |||||||||||||||  || |||||| | |||||||||||    
T  6581612 aatgcattgagaatcaaaacatttgatttttttaaa-aattattacttattttataatgcttaaagagtgttccagggacattcgttaacaagac 6581519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 394
Target Start/End: Original strand, 29685774 - 29685840
Alignment:
Q  328 ttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagac 394  Q
    |||||||||||||||| |||  ||||| ||| ||||||||||| |||| | |||| |||||||||||    
T  29685774 ttttgaaagaataattactttatttagcatgtttaaagagtgctccggaggcactcgttaacaagac 29685840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 400
Target Start/End: Original strand, 30869652 - 30869702
Alignment:
Q  350 tttagaatgcttaaagagtgccccggggacacttgttaacaagacccttga 400  Q
    ||||| ||||||||||||||||| || |||||| |||||||||| ||||||    
T  30869652 tttagcatgcttaaagagtgccctggagacactcgttaacaagatccttga 30869702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 393
Target Start/End: Original strand, 2393082 - 2393174
Alignment:
Q  300 aatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaaga 393  Q
    ||||| |||| |||| |||||||||||||||| | | | ||||| ||| ||||||||| |||||||| ||| |||| | |||| ||||||||||    
T  2393082 aatgtcttgagaatcaaaatatttgacttttttataaattaatttcttcttttagaatccttaaagaatgctccggag-cactcgttaacaaga 2393174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 349 - 398
Target Start/End: Original strand, 5962056 - 5962105
Alignment:
Q  349 ttttagaatgcttaaagagtgccccggggacacttgttaacaagaccctt 398  Q
    ||||||||||||||||||||| | ||| | |||| |||||||||||||||    
T  5962056 ttttagaatgcttaaagagtgtctcggaggcactcgttaacaagaccctt 5962105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 394
Target Start/End: Original strand, 12848547 - 12848607
Alignment:
Q  333 aaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagac 394  Q
    |||||||| || |||| ||||  |||||||||||||||||| || |||||||||||||||||    
T  12848547 aaagaatagttacttaatttaatatgcttaaagagtgcccc-ggaacacttgttaacaagac 12848607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 374
Target Start/End: Original strand, 27948053 - 27948129
Alignment:
Q  300 aatgtattgaaaatcgaaatatttgactttttgaaagaa--taattgcttattttagaatgcttaaagagtgccccg 374  Q
    |||| |||| ||||||||| |||||||||||| ||||||  ||||||||||||||| || | |||||| ||| ||||    
T  27948053 aatgcattggaaatcgaaacatttgacttttttaaagaatgtaattgcttattttaaaaggtttaaagtgtgtcccg 27948129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 390
Target Start/End: Complemental strand, 37993149 - 37993052
Alignment:
Q  293 tgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaaca 390  Q
    |||||| |||| ||||||||| | |||| |||| |||||||||||||| ||  | | ||||||||| ||||||| || ||||  |||||| |||||||    
T  37993149 tgtattaaatgcattgaaaattgtaatagttgattttttgaaagaatagttattaaatttagaatgtttaaagaatgtcccgaagacactcgttaaca 37993052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 368
Target Start/End: Complemental strand, 38292441 - 38292364
Alignment:
Q  292 gtgtatttaatgtattgaaaatcgaaatatttgactttt-tgaaagaataattgcttattttagaatgcttaaagagt 368  Q
    |||||||||||| ||||| ||| ||| ||||| |||||| | ||||||||||| | || |||| ||||||||||||||    
T  38292441 gtgtatttaatgcattgataattgaactatttcacttttctaaaagaataatttcctaatttaaaatgcttaaagagt 38292364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 364
Target Start/End: Original strand, 9049184 - 9049256
Alignment:
Q  292 gtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaa 364  Q
    ||||| |||||| ||||||||| |||| |||| || |||| ||||||||||| |||| ||||  |||||||||    
T  9049184 gtgtaattaatgcattgaaaattgaaaaatttaacattttaaaagaataattacttaatttaacatgcttaaa 9049256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 300 - 368
Target Start/End: Complemental strand, 33455032 - 33454964
Alignment:
Q  300 aatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagt 368  Q
    ||||||||| |||| ||||  |||||| |||| |||||||| || |||| ||||| |||||||||||||    
T  33455032 aatgtattgtaaattgaaaactttgacatttttaaagaatagtttcttaatttagcatgcttaaagagt 33454964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 335 - 391
Target Start/End: Original strand, 44921344 - 44921399
Alignment:
Q  335 agaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaa 391  Q
    ||||||||| ||  |||| ||||| ||||||||||||||||||||||| ||||||||    
T  44921344 agaataatttctccttttggaatg-ttaaagagtgccccggggacactcgttaacaa 44921399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 5e-26; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 310 - 398
Target Start/End: Original strand, 34032142 - 34032230
Alignment:
Q  310 aaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccctt 398  Q
    |||| ||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||  ||||||| |||||||||||||||    
T  34032142 aaattgaaatatttaacttttttaaagaataattacttattttagaatgcttaaagagtgccccaaggacactcgttaacaagaccctt 34032230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 291 - 369
Target Start/End: Complemental strand, 36160392 - 36160314
Alignment:
Q  291 cgtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtg 369  Q
    |||||| ||||| ||||||||||| ||| |||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  36160392 cgtgtaattaatatattgaaaatcaaaacatttgacttttttaaaaaataattgcttattttagaatgcttaaagagtg 36160314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 310 - 395
Target Start/End: Original strand, 17098238 - 17098323
Alignment:
Q  310 aaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagacc 395  Q
    |||||||||||||||||||||| ||| ||||||||||||||||   ||| |||||||||||||||| |||||| ||||||||||||    
T  17098238 aaatcgaaatatttgacttttttaaataataattgcttattttgtgatgtttaaagagtgccccggcgacactcgttaacaagacc 17098323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 295 - 369
Target Start/End: Complemental strand, 3758269 - 3758195
Alignment:
Q  295 tatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtg 369  Q
    |||| |||| ||||||||||||||||||||||||||| |||||||||||| |||||||| |||| ||||||||||    
T  3758269 tattcaatgcattgaaaatcgaaatatttgacttttttaaagaataattgattattttaaaatgtttaaagagtg 3758195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 293 - 398
Target Start/End: Complemental strand, 23023704 - 23023599
Alignment:
Q  293 tgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaag 392  Q
    ||||||||||| ||||||||| |||| | |||||||||| |  | |||||| |||   ||||||||||||||||||||||||||| |||| |||||||||    
T  23023704 tgtatttaatgcattgaaaattgaaacaattgacttttttagtggataatttctttaattagaatgcttaaagagtgccccgggggcactcgttaacaag 23023605  T
Q  393 accctt 398  Q
    ||||||    
T  23023604 accctt 23023599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 305 - 390
Target Start/End: Complemental strand, 26663694 - 26663609
Alignment:
Q  305 attgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaaca 390  Q
    |||| |||||||||||||||||||||| ||| ||||||| |||||||||||||||||||| || |||| |||  ||||||||||||    
T  26663694 attggaaatcgaaatatttgacttttttaaaaaataatttcttattttagaatgcttaaaaagcgccctgggagcacttgttaaca 26663609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 305 - 390
Target Start/End: Complemental strand, 26935289 - 26935204
Alignment:
Q  305 attgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaaca 390  Q
    |||| |||||||||||||||||||||| ||| ||||||| |||||||||||||||||||| || |||| |||  ||||||||||||    
T  26935289 attggaaatcgaaatatttgacttttttaaaaaataatttcttattttagaatgcttaaaaagcgccctgggagcacttgttaaca 26935204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 292 - 395
Target Start/End: Original strand, 30501174 - 30501277
Alignment:
Q  292 gtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaa 391  Q
    ||||||| ||||||||| |||| | |||| |||||||||| ||||||||||| || | ||| | ||||||||||||||||| |||| |||| ||||||||    
T  30501174 gtgtattgaatgtattggaaattgtaataattgactttttaaaagaataattactaaatttgggatgcttaaagagtgccctgggggcactcgttaacaa 30501273  T
Q  392 gacc 395  Q
    ||||    
T  30501274 gacc 30501277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 292 - 395
Target Start/End: Original strand, 30541517 - 30541620
Alignment:
Q  292 gtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaa 391  Q
    ||||||| ||||||||| |||| | |||| |||||||||| ||||||||||| || | ||| | ||||||||||||||||| |||| |||| ||||||||    
T  30541517 gtgtattgaatgtattggaaattgtaataattgactttttaaaagaataattactaaatttgggatgcttaaagagtgccctgggggcactcgttaacaa 30541616  T
Q  392 gacc 395  Q
    ||||    
T  30541617 gacc 30541620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 306 - 395
Target Start/End: Complemental strand, 2816236 - 2816147
Alignment:
Q  306 ttgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagacc 395  Q
    |||||||| ||||||||||| ||||| ||||||||||||||| ||||  |||||||||||||| ||||||   |||| ||||||||||||    
T  2816236 ttgaaaattgaaatatttgatttttttaaagaataattgcttcttttgaaatgcttaaagagtaccccggtagcactcgttaacaagacc 2816147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 310 - 398
Target Start/End: Original strand, 25415916 - 25416004
Alignment:
Q  310 aaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccctt 398  Q
    |||||||||||||||||||||| |||| |||||| || |||||| |||| ||||||||||| ||||   |||| |||||||||||||||    
T  25415916 aaatcgaaatatttgacttttttaaagtataattactaattttaaaatgtttaaagagtgcgccggtagcactcgttaacaagaccctt 25416004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 300 - 377
Target Start/End: Original strand, 32017460 - 32017537
Alignment:
Q  300 aatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccgggg 377  Q
    |||| ||||||||| ||||||||| ||||||| ||||||||||||||| ||||   ||| ||||||||||||||||||    
T  32017460 aatgcattgaaaattgaaatattttacttttttaaagaataattgcttgttttgatatgtttaaagagtgccccgggg 32017537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 305 - 393
Target Start/End: Complemental strand, 8761986 - 8761898
Alignment:
Q  305 attgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaaga 393  Q
    ||||||||| ||||||||| ||||||| | ||||||||| ||| ||||||||| |||||||||||  |||| ||||||  |||||||||    
T  8761986 attgaaaattgaaatatttaacttttttatagaataatttctttttttagaatccttaaagagtgatccggagacactcattaacaaga 8761898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 300 - 398
Target Start/End: Complemental strand, 19692788 - 19692689
Alignment:
Q  300 aatgtattgaaaatcgaaatatttgactttttgaaagaat-aattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccctt 398  Q
    |||| |||||||||||||||||||||||||||  |  ||| |||| ||| ||||  |||  ||||||||||||||||||||||| |||||||| ||||||    
T  19692788 aatgcattgaaaatcgaaatatttgactttttttataaattaatttcttcttttgaaatctttaaagagtgccccggggacactcgttaacaaaaccctt 19692689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 300 - 394
Target Start/End: Complemental strand, 779149 - 779056
Alignment:
Q  300 aatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagac 394  Q
    |||| |||| ||||||||| |||| ||||||| ||| ||||||| || ||||| ||||| ||||||||||||| |||| |||| |||||||||||    
T  779149 aatgcattggaaatcgaaacatttaactttttaaaa-aataattactaatttttgaatgtttaaagagtgcccagggggcactcgttaacaagac 779056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 310 - 396
Target Start/End: Complemental strand, 8247121 - 8247035
Alignment:
Q  310 aaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccc 396  Q
    |||||||||||||||||||||| | | ||| ||| ||| |||| |||| ||||||||||| | ||||| |||| |||||||||||||    
T  8247121 aaatcgaaatatttgacttttttataaaattatttcttcttttggaatccttaaagagtgtcacgggggcactcgttaacaagaccc 8247035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 327 - 397
Target Start/End: Original strand, 25437944 - 25438014
Alignment:
Q  327 tttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccct 397  Q
    ||||| ||||||||| | |||| ||||| |||||||||||||| ||||||| |||| ||||||||||||||    
T  25437944 ttttttaaagaataacttcttaatttagcatgcttaaagagtgtcccgggggcactcgttaacaagaccct 25438014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 292 - 398
Target Start/End: Complemental strand, 41583615 - 41583509
Alignment:
Q  292 gtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaa 391  Q
    ||||||| |||| |||| || | | ||||||| |||||||||| |||||||| || | ||| | || ||||||||||| ||||||| |||| ||||||||    
T  41583615 gtgtattcaatgcattggaatttgtaatatttaactttttgaaggaataatttctaaatttgggatccttaaagagtgacccgggggcactcgttaacaa 41583516  T
Q  392 gaccctt 398  Q
    |||||||    
T  41583515 gaccctt 41583509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 292 - 389
Target Start/End: Complemental strand, 16161491 - 16161394
Alignment:
Q  292 gtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaac 389  Q
    |||||||||||  ||||||||| ||| ||||| |||||||  || ||||||| | || ||| ||||||||||||||||||||||  ||||| ||||||    
T  16161491 gtgtatttaatccattgaaaattgaattatttaactttttttaaaaataatttcctaatttggaatgcttaaagagtgccccggaaacactcgttaac 16161394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 322 - 394
Target Start/End: Original strand, 112550 - 112622
Alignment:
Q  322 ttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagac 394  Q
    |||||||||  ||||||||||| || ||||||  |||||||||||||||||||  |||||| |||||||||||    
T  112550 ttgacttttcaaaagaataattactaattttatgatgcttaaagagtgccccgatgacactcgttaacaagac 112622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 310 - 398
Target Start/End: Original strand, 14475052 - 14475140
Alignment:
Q  310 aaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccctt 398  Q
    |||| |||||||||||| |||| | ||||||||| ||| ||||| ||||||| ||||| |||||||   ||||||||||||| ||||||    
T  14475052 aaattgaaatatttgacatttttatagaataatttcttcttttaaaatgcttgaagagagccccggaagcacttgttaacaaaaccctt 14475140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 300 - 396
Target Start/End: Complemental strand, 35515997 - 35515902
Alignment:
Q  300 aatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccc 396  Q
    ||||||||||||||  ||||||||||| |||| || |||||||| ||| |||||||||| ||||| |||| ||||  |||||| |||||||| ||||    
T  35515997 aatgtattgaaaatttaaatatttgac-ttttcaacgaataatttcttcttttagaatgtttaaaaagtgtcccgaagacactcgttaacaaaaccc 35515902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 292 - 391
Target Start/End: Complemental strand, 8221194 - 8221096
Alignment:
Q  292 gtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaa 391  Q
    ||||||| |||| ||||||| | | |||| |||||||||| | |||||||||||| | ||||||||| ||||||||||  |||||  |||||||||||||    
T  8221194 gtgtattgaatgcattgaaagttgtaatagttgactttttaagagaataattgctaaatttagaatg-ttaaagagtgttccgggagcacttgttaacaa 8221096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 354 - 393
Target Start/End: Original strand, 9330407 - 9330446
Alignment:
Q  354 gaatgcttaaagagtgccccggggacacttgttaacaaga 393  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  9330407 gaatgcttaaagagtgccccggggacactcgttaacaaga 9330446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 300 - 387
Target Start/End: Complemental strand, 14042527 - 14042440
Alignment:
Q  300 aatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgtta 387  Q
    |||| |||| ||||| |||||||||||||||| ||| |||||||  ||||||||||||  |||||||||  ||||| |||||| ||||    
T  14042527 aatgcattggaaatcaaaatatttgacttttttaaataataatttattattttagaatctttaaagagtatcccggagacactcgtta 14042440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 349 - 396
Target Start/End: Complemental strand, 31672426 - 31672379
Alignment:
Q  349 ttttagaatgcttaaagagtgccccggggacacttgttaacaagaccc 396  Q
    |||| |||||||||||||||||||||||| |||| |||||||||||||    
T  31672426 ttttggaatgcttaaagagtgccccgggggcactcgttaacaagaccc 31672379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 387
Target Start/End: Complemental strand, 27016730 - 27016648
Alignment:
Q  305 attgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgtta 387  Q
    |||| |||| ||||| ||||||||||| |  |||||||| ||| |||| |||||||||||||||||||||  |||||| ||||    
T  27016730 attggaaattgaaatttttgacttttttatggaataatttcttcttttggaatgcttaaagagtgccccgatgacactcgtta 27016648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 292 - 398
Target Start/End: Complemental strand, 30104876 - 30104770
Alignment:
Q  292 gtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaa 391  Q
    ||||||| |||| |||| |||| | |||  |||||||||| ||| |||| || || | ||| | ||||||||||||||||||| || |||||||||||||    
T  30104876 gtgtattgaatgcattggaaattgtaattgttgactttttaaaaaaatagttactaaatttgggatgcttaaagagtgccccgagggcacttgttaacaa 30104777  T
Q  392 gaccctt 398  Q
     ||||||    
T  30104776 taccctt 30104770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 293 - 394
Target Start/End: Original strand, 24041058 - 24041158
Alignment:
Q  293 tgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaag 392  Q
    |||||||||||||||| ||||  || ||||||| ||||| ||||||||||| | || |||   ||||||||||||| |||||| | |||| |||||||||    
T  24041058 tgtatttaatgtattggaaattaaactatttgaattttttaaagaataatttcataatttgatatgcttaaagagtaccccggag-cactcgttaacaag 24041156  T
Q  393 ac 394  Q
    ||    
T  24041157 ac 24041158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 316 - 369
Target Start/End: Complemental strand, 31914217 - 31914165
Alignment:
Q  316 aaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtg 369  Q
    |||| ||||||||||| ||||||||||| |||| ||||||||||||||||||||    
T  31914217 aaatgtttgacttttt-aaagaataattacttaatttagaatgcttaaagagtg 31914165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 368
Target Start/End: Original strand, 27833332 - 27833400
Alignment:
Q  300 aatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagt 368  Q
    |||| |||| |||||||||||||||||||||  |||||||||||| ||  |||| ||||||||| ||||    
T  27833332 aatgcattgtaaatcgaaatatttgacttttgtaaagaataattgattcatttaaaatgcttaatgagt 27833400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 397
Target Start/End: Complemental strand, 28793406 - 28793302
Alignment:
Q  293 tgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaag 392  Q
    |||| |||||| || | |||||||||||||||||||||| | | ||| ||| ||| |||| |||| ||||||||| || ||||   |||| |||||||||    
T  28793406 tgtaattaatgcatcggaaatcgaaatatttgacttttttataaaatcatttcttcttttggaatccttaaagagcgcaccggaagcactcgttaacaag 28793307  T
Q  393 accct 397  Q
    |||||    
T  28793306 accct 28793302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 369
Target Start/End: Original strand, 39382492 - 39382556
Alignment:
Q  305 attgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtg 369  Q
    |||||||||  |||||||| ||||||| |||||||||||| ||  ||| ||||||||||||||||    
T  39382492 attgaaaataaaaatatttaactttttaaaagaataattgtttgatttggaatgcttaaagagtg 39382556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 322 - 369
Target Start/End: Complemental strand, 141914 - 141867
Alignment:
Q  322 ttgactttttgaaagaataattgcttattttagaatgcttaaagagtg 369  Q
    |||||||||| |||||||||||| ||||||| | ||||||||||||||    
T  141914 ttgactttttaaaagaataattgtttattttggtatgcttaaagagtg 141867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 345 - 396
Target Start/End: Complemental strand, 10410469 - 10410418
Alignment:
Q  345 cttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccc 396  Q
    |||| ||||||| | |||||||||||||||||| |||| |||||||||||||    
T  10410469 cttaatttagaaagtttaaagagtgccccgggggcactcgttaacaagaccc 10410418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 293 - 396
Target Start/End: Complemental strand, 33590125 - 33590023
Alignment:
Q  293 tgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaag 392  Q
    |||||||||||||||| |||| ||| ||||| | ||||| |||||||||||  ||| ||||||||  ||||||||  | |||||| |||| |||||| ||    
T  33590125 tgtatttaatgtattggaaattgaactatttaattttttaaaagaataatttattaatttagaatatttaaagagcacaccgggg-cactcgttaacgag 33590027  T
Q  393 accc 396  Q
    ||||    
T  33590026 accc 33590023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 310 - 392
Target Start/End: Original strand, 1354400 - 1354481
Alignment:
Q  310 aaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaag 392  Q
    |||||||||||||| ||||||| | | ||||||| ||| ||||||||| ||| ||||||| | ||| | ||||||||||||||    
T  1354400 aaatcgaaatatttaacttttttataaaataatttctttttttagaattctt-aagagtgtctcggaggcacttgttaacaag 1354481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 316 - 394
Target Start/End: Complemental strand, 10051778 - 10051700
Alignment:
Q  316 aaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagac 394  Q
    |||||||||||||||| | | ||| ||| ||| ||||| ||| |||||||||||||   |||||||| |||||||||||    
T  10051778 aaatatttgacttttttataaaattatttcttcttttaaaatccttaaagagtgccttagggacactcgttaacaagac 10051700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 300 - 370
Target Start/End: Complemental strand, 42265500 - 42265430
Alignment:
Q  300 aatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgc 370  Q
    |||| ||||||||| ||||| ||||||||||| |||||||||||  ||  || ||||| ||||||||||||    
T  42265500 aatgcattgaaaattgaaatttttgacttttttaaagaataatttttttattaagaatccttaaagagtgc 42265430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 345 - 398
Target Start/End: Complemental strand, 2977791 - 2977738
Alignment:
Q  345 cttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccctt 398  Q
    |||||||||||||||||||| ||||   | |||||||| |||||||||||||||    
T  2977791 cttattttagaatgcttaaaaagtgtttcagggacactcgttaacaagaccctt 2977738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 369
Target Start/End: Original strand, 10145374 - 10145451
Alignment:
Q  292 gtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtg 369  Q
    ||||| |||||| ||| |||||| |||||||| ||||||| |||||||| ||  ||||||| |  |||||||||||||    
T  10145374 gtgtaattaatgcattcaaaatcaaaatattttacttttttaaagaatatttatttattttggtgtgcttaaagagtg 10145451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 364
Target Start/End: Complemental strand, 22873544 - 22873471
Alignment:
Q  291 cgtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaa 364  Q
    |||||||| |||| ||| |||||  |||||||| ||||||| |||||||||||  |||||||| ||| ||||||    
T  22873544 cgtgtattcaatgcattaaaaattaaaatatttaacttttttaaagaataattctttattttaaaatacttaaa 22873471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 398
Target Start/End: Complemental strand, 29342367 - 29342302
Alignment:
Q  333 aaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccctt 398  Q
    ||||||||||| ||  |||| ||||||||||||||||  || ||| |||| |||||||||||||||    
T  29342367 aaagaataatttctccttttggaatgcttaaagagtgttcccggggcactcgttaacaagaccctt 29342302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 328 - 401
Target Start/End: Complemental strand, 39177717 - 39177645
Alignment:
Q  328 ttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagacccttgat 401  Q
    ||||||||| |||||| |||  ||||| || ||||||||||||| ||| |||||| |||||||||||| |||||    
T  39177717 ttttgaaaggataattactttatttagcat-cttaaagagtgcctcggagacactagttaacaagaccgttgat 39177645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 399
Target Start/End: Complemental strand, 544010 - 543966
Alignment:
Q  355 aatgcttaaagagtgccccggggacacttgttaacaagacccttg 399  Q
    |||||||||||||||| |||| |||||  ||||||||||||||||    
T  544010 aatgcttaaagagtgctccggagacacccgttaacaagacccttg 543966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 310 - 394
Target Start/End: Complemental strand, 3263801 - 3263717
Alignment:
Q  310 aaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagac 394  Q
    |||||||||| ||||||||||| | | ||| ||| ||| ||||  ||| |||||||||||||||||   |||| |||||||||||    
T  3263801 aaatcgaaatctttgacttttttataaaatgatttcttcttttgaaattcttaaagagtgccccggaagcactcgttaacaagac 3263717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 340
Target Start/End: Original strand, 4434667 - 4434715
Alignment:
Q  292 gtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaata 340  Q
    |||||||||||||||||||||| ||| ||||| ||||||| ||| ||||    
T  4434667 gtgtatttaatgtattgaaaattgaagtatttaactttttaaaataata 4434715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 336 - 396
Target Start/End: Complemental strand, 25486980 - 25486920
Alignment:
Q  336 gaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccc 396  Q
    |||||||| ||| ||||||||| ||| ||||| || |||| |||||| |||||||||||||    
T  25486980 gaataatttcttcttttagaatcctttaagagcgctccggagacactcgttaacaagaccc 25486920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 295 - 398
Target Start/End: Original strand, 27310250 - 27310354
Alignment:
Q  295 tatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttatttta-gaatgcttaaagagtgccccggggacacttgttaacaaga 393  Q
    |||||| ||||||| |||| ||| | || |||||||| ||||||||||| | || ||||  |||||||||||||||| |||| | |||| | |||||| |    
T  27310250 tatttattgtattggaaattgaattgttagacttttttaaagaataatttcataatttataaatgcttaaagagtgctccggaggcactcggtaacaaaa 27310349  T
Q  394 ccctt 398  Q
    |||||    
T  27310350 ccctt 27310354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 358
Target Start/End: Complemental strand, 39099943 - 39099875
Alignment:
Q  292 gtgtatttaatgtattgaaaatcgaaatatttg-actttttgaaa-gaataattgcttattttagaatg 358  Q
    |||||||  ||| |||||||||||||||||||| ||||||| ||| ||||||||| |||||||| ||||    
T  39099943 gtgtattcgatgcattgaaaatcgaaatatttgaacttttttaaaggaataattgtttattttaaaatg 39099875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 1e-23; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 300 - 396
Target Start/End: Complemental strand, 30509380 - 30509284
Alignment:
Q  300 aatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccc 396  Q
    |||| ||||||||||||||| ||||| ||||| |||||||||||||||||||| | ||||||||||||||  |||| |||||| |||||||||||||    
T  30509380 aatgcattgaaaatcgaaatgtttgatttttttaaagaataattgcttattttggtatgcttaaagagtgttccggagacactcgttaacaagaccc 30509284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 298 - 396
Target Start/End: Original strand, 3605056 - 3605154
Alignment:
Q  298 ttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaat-gcttaaagagtgccccggggacacttgttaacaagaccc 396  Q
    ||||||| ||| |||||||||||||||||||| | | |||||||||| ||||||| |||| |||||||||||| ||||  |||||| |||||||||||||    
T  3605056 ttaatgttttggaaatcgaaatatttgactttcttagagaataattgtttatttt-gaatagcttaaagagtgtcccgatgacactcgttaacaagaccc 3605154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 328 - 398
Target Start/End: Original strand, 13445801 - 13445871
Alignment:
Q  328 ttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccctt 398  Q
    |||| |||||||| || |||| ||||| ||||||||||||||| ||||||||||| |||||||||||||||    
T  13445801 tttttaaagaatacttacttaatttagcatgcttaaagagtgcaccggggacactcgttaacaagaccctt 13445871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 300 - 398
Target Start/End: Original strand, 5446704 - 5446802
Alignment:
Q  300 aatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccctt 398  Q
    |||| ||||||||| | || | |||||| ||  ||||||||||| || ||||||||||||||| | |||| ||| |||||||| |||||||||||||||    
T  5446704 aatgcattgaaaattgtaacagttgactattcaaaagaataattactaattttagaatgcttacaaagtgtccctgggacactcgttaacaagaccctt 5446802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 300 - 398
Target Start/End: Complemental strand, 35229356 - 35229258
Alignment:
Q  300 aatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccctt 398  Q
    ||||||||| || | | ||||| |||||||||||||||||||| ||| | ||| |  | ||||||||||| ||||||| |||| |||||||||||||||    
T  35229356 aatgtattggaatttgtaatatgtgactttttgaaagaataatcgctaaatttgggttccttaaagagtgtcccgggggcactcgttaacaagaccctt 35229258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 333 - 395
Target Start/End: Original strand, 34185101 - 34185163
Alignment:
Q  333 aaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagacc 395  Q
    ||||||||||| |||  ||  |||||||||||||||||||||| | |||||||||||||||||    
T  34185101 aaagaataatttctttattaggaatgcttaaagagtgccccggaggcacttgttaacaagacc 34185163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 316 - 366
Target Start/End: Complemental strand, 34921615 - 34921565
Alignment:
Q  316 aaatatttgactttttgaaagaataattgcttattttagaatgcttaaaga 366  Q
    |||||||| ||||||| |||||||||||| |||||||||||||| ||||||    
T  34921615 aaatatttaacttttttaaagaataattgattattttagaatgcctaaaga 34921565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 292 - 373
Target Start/End: Complemental strand, 12132599 - 12132518
Alignment:
Q  292 gtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgcccc 373  Q
    ||||||| |||| ||||||||| ||| |||||||| |||| |||||||| || | || | |||||||||| |||||||||||    
T  12132599 gtgtattaaatgcattgaaaattgaattatttgacgtttttaaagaatattttcataatatagaatgcttcaagagtgcccc 12132518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 395
Target Start/End: Original strand, 4810560 - 4810664
Alignment:
Q  292 gtgtatttaatgtattgaaaatcgaaatatttg-actttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaaca 390  Q
    |||||||||| || |||||||| |||| ||||  ||||||| |||||||||||   |  ||||||||||||||| |||||| ||||| ||||  ||||||    
T  4810560 gtgtatttaaggtcttgaaaattgaaacatttttacttttttaaagaataattttctgatttagaatgcttaaatagtgcctcgggggcactctttaaca 4810659  T
Q  391 agacc 395  Q
    |||||    
T  4810660 agacc 4810664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 310 - 398
Target Start/End: Original strand, 6586469 - 6586556
Alignment:
Q  310 aaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccctt 398  Q
    |||| ||| ||| ||||||||| ||||| ||||| | || ||||| |||||||||||||||||| ||| || | |||||||||||||||    
T  6586469 aaattgaactatctgactttttcaaagattaatttcctaatttagtatgcttaaagagtgccccaggg-caatcgttaacaagaccctt 6586556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 368
Target Start/End: Complemental strand, 12307897 - 12307821
Alignment:
Q  292 gtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagt 368  Q
    ||||| ||||||||||||||||  |||||||||||||||| | | ||||||| ||| ||||  ||| ||||||||||    
T  12307897 gtgtaattaatgtattgaaaattaaaatatttgacttttttataaaataatttcttcttttgaaatccttaaagagt 12307821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 337 - 397
Target Start/End: Complemental strand, 27752673 - 27752613
Alignment:
Q  337 aataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccct 397  Q
    ||||||| |||| ||||||||| ||||||||| || ||| |||||||||||| ||||||||    
T  27752673 aataattacttaatttagaatgtttaaagagtacctcggagacacttgttaataagaccct 27752613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 292 - 391
Target Start/End: Complemental strand, 30739671 - 30739572
Alignment:
Q  292 gtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaa 391  Q
    ||||||| |||| |||| |||||| |  | || ||||||| | ||||||||| || | |||||||| ||||||||||||||||  |||||| ||||||||    
T  30739671 gtgtattgaatgcattggaaatcgtaccagttaactttttaatagaataattactaaatttagaatacttaaagagtgccccgaagacactcgttaacaa 30739572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 300 - 374
Target Start/End: Original strand, 13070684 - 13070758
Alignment:
Q  300 aatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccg 374  Q
    ||||||||| |||||  || |||| ||||||| ||| ||| |||||||||||||||||   ||||||||||||||    
T  13070684 aatgtattggaaatcacaacatttaactttttaaaaaaattattgcttattttagaatatctaaagagtgccccg 13070758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 377
Target Start/End: Complemental strand, 1841055 - 1840970
Alignment:
Q  292 gtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccgggg 377  Q
    ||||||| |||| |||| |||| | |||| |||| ||||| |||||||||||  | | ||||  ||||||||||||||||||||||    
T  1841055 gtgtattgaatgcattggaaattgtaatagttgattttttaaaagaataattattaaatttaatatgcttaaagagtgccccgggg 1840970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 398
Target Start/End: Original strand, 2692489 - 2692569
Alignment:
Q  317 aatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccctt 398  Q
    |||| |||||||||| ||| ||||||| || | ||| | || ||||||||||| ||||| | ||||||||||||||||||||    
T  2692489 aatagttgactttttaaaataataattactaaattttggattcttaaagagtgtcccggtg-cacttgttaacaagaccctt 2692569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 373
Target Start/End: Original strand, 13070547 - 13070620
Alignment:
Q  300 aatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgcccc 373  Q
    ||||||||| |||||  || |||| ||||||| ||| ||| |||||||||||||||||   |||||||||||||    
T  13070547 aatgtattggaaatcacaacatttaactttttaaaaaaattattgcttattttagaatatctaaagagtgcccc 13070620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 369
Target Start/End: Original strand, 25028732 - 25028809
Alignment:
Q  292 gtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtg 369  Q
    ||||||| |||| ||||||||| ||| | ||||||||||| |||||||||||   || ||| ||||| ||||||||||    
T  25028732 gtgtattcaatgcattgaaaattgaactgtttgacttttttaaagaataattttctaattttgaatgtttaaagagtg 25028809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 328 - 392
Target Start/End: Original strand, 3753165 - 3753229
Alignment:
Q  328 ttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaag 392  Q
    |||||||||||||||| |||  ||||  |||||||||||||| | | ||| ||||||||||||||    
T  3753165 ttttgaaagaataattactttatttatcatgcttaaagagtggcacaggggcacttgttaacaag 3753229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 397
Target Start/End: Original strand, 19293520 - 19293592
Alignment:
Q  325 actttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccct 397  Q
    ||||||| ||| |||||||| | | ||||| |||||||||||||| |||| | ||||| ||||| ||||||||    
T  19293520 actttttaaaataataattgttaaatttaggatgcttaaagagtgtcccgagaacactcgttaataagaccct 19293592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 333 - 389
Target Start/End: Complemental strand, 28874430 - 28874374
Alignment:
Q  333 aaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaac 389  Q
    ||||||||||| || ||||||  ||||||||||||||| || || ||||||||||||    
T  28874430 aaagaataattactaattttatgatgcttaaagagtgcaccaggaacacttgttaac 28874374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 4e-23; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 305 - 396
Target Start/End: Complemental strand, 37708496 - 37708405
Alignment:
Q  305 attgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccc 396  Q
    ||||||||| ||||| ||| ||||||| ||||| |||||||||||||||  |||||||||||||||| ||||| ||||||||||||||||||    
T  37708496 attgaaaattgaaatgtttaacttttttaaagactaattgcttattttaatatgcttaaagagtgcctcgggggcacttgttaacaagaccc 37708405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 300 - 398
Target Start/End: Original strand, 48322248 - 48322345
Alignment:
Q  300 aatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccctt 398  Q
    ||||||||| ||||||||| |||||||||||| ||| ||||||| |||||||||||||||||||||||| ||||  | | ||| |||||||||||||||    
T  48322248 aatgtattggaaatcgaaacatttgactttttaaaaaaataattacttattttagaatgcttaaagagtacccc-tgaatactcgttaacaagaccctt 48322345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 300 - 393
Target Start/End: Complemental strand, 24313615 - 24313522
Alignment:
Q  300 aatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaaga 393  Q
    |||| ||||||||| ||||  |||||| |||| |||||||||||| ||| ||||||||| ||||||||||||||| ||||||| ||||||||||    
T  24313615 aatgcattgaaaattgaaaactttgacatttttaaagaataattgtttaatttagaatgtttaaagagtgccccgaggacactcgttaacaaga 24313522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 292 - 398
Target Start/End: Original strand, 54290811 - 54290917
Alignment:
Q  292 gtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaa 391  Q
    |||||||||||  |||| |||| ||| | ||||||||||| ||||||||| | | || ||||  ||||||||||||||||||||||| ||| ||||||||    
T  54290811 gtgtatttaatacattggaaattgaactgtttgacttttttaaagaataacttcctaatttatcatgcttaaagagtgccccggggatactcgttaacaa 54290910  T
Q  392 gaccctt 398  Q
    |||||||    
T  54290911 gaccctt 54290917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 328 - 397
Target Start/End: Complemental strand, 29612056 - 29611987
Alignment:
Q  328 ttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccct 397  Q
    |||| ||||||||||| |||||||||||||| |||||||||| ||||||| |||| ||||||||||||||    
T  29612056 tttttaaagaataattacttattttagaatgtttaaagagtgtcccgggggcactcgttaacaagaccct 29611987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 305 - 398
Target Start/End: Complemental strand, 48551099 - 48551006
Alignment:
Q  305 attgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccctt 398  Q
    ||||||||| ||||  |||||| |||| ||||||||||| |||| ||||| ||||||||||||||| | ||||||||| |||||||| ||||||    
T  48551099 attgaaaattgaaaactttgacatttttaaagaataatttcttaatttagcatgcttaaagagtgctctggggacactcgttaacaacaccctt 48551006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 313 - 399
Target Start/End: Complemental strand, 34758980 - 34758894
Alignment:
Q  313 tcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagacccttg 399  Q
    ||||||||||| ||||||| | | ||||||| ||| |||| |||| ||||||||||||||||| | |||| ||||||||||||||||    
T  34758980 tcgaaatatttcacttttttataaaataattacttctttttgaatccttaaagagtgccccggaggcactcgttaacaagacccttg 34758894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 305 - 391
Target Start/End: Original strand, 50217018 - 50217104
Alignment:
Q  305 attgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaa 391  Q
    |||||||||||||||  ||||||| || ||||||||||||||| |||||| ||| ||||||||||| |  |||||||| ||||||||    
T  50217018 attgaaaatcgaaatgattgacttctttaaagaataattgcttgttttagtatgtttaaagagtgctcttgggacactcgttaacaa 50217104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 321 - 398
Target Start/End: Complemental strand, 45757972 - 45757895
Alignment:
Q  321 tttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccctt 398  Q
    |||||| |||| |||||||||||||||| ||||  ||||||||||||||  |||| |||||| |||||||||||||||    
T  45757972 tttgacatttttaaagaataattgcttaatttaacatgcttaaagagtgatccggagacactcgttaacaagaccctt 45757895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 333 - 394
Target Start/End: Complemental strand, 52309047 - 52308986
Alignment:
Q  333 aaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagac 394  Q
    ||||||||||||||| |||| | |||||||||||||||||||||| |||| |||||||||||    
T  52309047 aaagaataattgcttgttttggtatgcttaaagagtgccccgggggcactcgttaacaagac 52308986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 315 - 372
Target Start/End: Complemental strand, 30082908 - 30082849
Alignment:
Q  315 gaaatatttgactttttg--aaagaataattgcttattttagaatgcttaaagagtgccc 372  Q
    |||||||||||||||||   ||||||||| ||||||||||||||||||||||||||||||    
T  30082908 gaaatatttgacttttttttaaagaataactgcttattttagaatgcttaaagagtgccc 30082849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 300 - 398
Target Start/End: Original strand, 30463999 - 30464095
Alignment:
Q  300 aatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccctt 398  Q
    |||| ||| ||||| ||||| ||||||||||| | ||||||||| ||| |||| |||||||||| |||||||||  | ||||| |||||||||||||||    
T  30463999 aatgcattaaaaattgaaatgtttgacttttttatagaataatttcttcttttggaatgcttaacgagtgcccc--gaacactcgttaacaagaccctt 30464095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 300 - 395
Target Start/End: Original strand, 38457259 - 38457352
Alignment:
Q  300 aatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagacc 395  Q
    |||| |||||||||| |||||||| | ||||| |||||||||||||||||| ||||||||||||||| || || || | |||| ||||||||||||    
T  38457259 aatgcattgaaaatcaaaatatttaatttttt-aaagaataattgcttattatagaatgcttaaagaatgtcctggag-cactcgttaacaagacc 38457352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 291 - 370
Target Start/End: Complemental strand, 39976798 - 39976720
Alignment:
Q  291 cgtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgc 370  Q
    |||||| | |||||||||||||| |||| |||||||||||| ||| |||||||| ||||||||||||| | |||||||||    
T  39976798 cgtgtaatcaatgtattgaaaatagaaacatttgacttttttaaa-aataattgattattttagaatgttcaaagagtgc 39976720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 321 - 395
Target Start/End: Complemental strand, 25461513 - 25461440
Alignment:
Q  321 tttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagacc 395  Q
    ||||||||||| |||||||||| |||||||||  |||| ||||||||||||||| || |||| ||||||||||||    
T  25461513 tttgacttttttaaagaataatggcttattttgcaatgtttaaagagtgccccgagg-cactcgttaacaagacc 25461440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 333 - 395
Target Start/End: Complemental strand, 50604084 - 50604022
Alignment:
Q  333 aaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagacc 395  Q
    ||||||||||| |||| ||||||||| ||||||||||||| || |||||| ||||||||||||    
T  50604084 aaagaataattacttaatttagaatggttaaagagtgccctggagacactcgttaacaagacc 50604022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 310 - 371
Target Start/End: Original strand, 8703366 - 8703427
Alignment:
Q  310 aaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgcc 371  Q
    ||||| |||||||| ||||||| ||| || |||||||||||||||||||||||| |||||||    
T  8703366 aaatcaaaatatttaacttttttaaataacaattgcttattttagaatgcttaacgagtgcc 8703427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 310 - 371
Target Start/End: Original strand, 9055253 - 9055314
Alignment:
Q  310 aaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgcc 371  Q
    ||||| |||||||| ||||||| ||| || |||||||||||||||||||||||| |||||||    
T  9055253 aaatcaaaatatttaacttttttaaataacaattgcttattttagaatgcttaacgagtgcc 9055314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 334 - 395
Target Start/End: Complemental strand, 23642779 - 23642718
Alignment:
Q  334 aagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagacc 395  Q
    ||||||||||||||||||| | |||||||||||||| || || |||||| ||||||||||||    
T  23642779 aagaataattgcttattttggtatgcttaaagagtgtccaggagacactagttaacaagacc 23642718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 305 - 370
Target Start/End: Original strand, 42846053 - 42846118
Alignment:
Q  305 attgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgc 370  Q
    ||||||||| |||||| |||||||||| ||||||||||| || | ||||| |||||||||||||||    
T  42846053 attgaaaattgaaatagttgactttttcaaagaataattactaaatttaggatgcttaaagagtgc 42846118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 293 - 397
Target Start/End: Original strand, 39400312 - 39400416
Alignment:
Q  293 tgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaag 392  Q
    |||| |||||| |||||||||  |||| ||| |||| || |||||||||||  ||||||||| || ||||||||||| | ||||| |||| ||||||||     
T  39400312 tgtaattaatgcattgaaaattaaaatgtttaacttgtttaaagaataattaattattttagtatacttaaagagtgtcacgggggcactcgttaacaaa 39400411  T
Q  393 accct 397  Q
    |||||    
T  39400412 accct 39400416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 300 - 398
Target Start/End: Complemental strand, 29099240 - 29099141
Alignment:
Q  300 aatgtattgaaaatcgaaatatttgactttttgaaag-aataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccctt 398  Q
    |||| ||||||||| ||||| |||||||||||  | | ||| ||| ||| |||| ||||||||||| |||||||| || ||||| |||||||||||||||    
T  29099240 aatgaattgaaaattgaaatttttgactttttttatggaatcatttcttcttttggaatgcttaaaaagtgcccctggaacactcgttaacaagaccctt 29099141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 340 - 398
Target Start/End: Original strand, 3027067 - 3027125
Alignment:
Q  340 aattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccctt 398  Q
    |||| |||| ||||||||||||||||||||| |||| | |||| |||||||||||||||    
T  3027067 aattacttaatttagaatgcttaaagagtgctccggaggcactcgttaacaagaccctt 3027125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 300 - 394
Target Start/End: Original strand, 48180213 - 48180307
Alignment:
Q  300 aatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagac 394  Q
    |||| |||| |||| | |||| |||||||||| |||||||||||| | | ||  | |||||||||||||| ||||| |||||| |||||||||||    
T  48180213 aatgcattggaaattgtaatagttgactttttaaaagaataattgttaaattggggatgcttaaagagtgtcccggagacactcgttaacaagac 48180307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 310 - 372
Target Start/End: Original strand, 50368458 - 50368520
Alignment:
Q  310 aaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccc 372  Q
    ||||| |||||||||||||||| ||||||||||| ||||||||| |||  ||||||| |||||    
T  50368458 aaatcaaaatatttgacttttttaaagaataattacttattttaaaatctttaaagaatgccc 50368520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 310 - 398
Target Start/End: Complemental strand, 10921394 - 10921308
Alignment:
Q  310 aaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccctt 398  Q
    ||||| |||||||||| ||||| ||| |||| || |||||||||||||||||||||||||  | | ||| |||||||||| ||||||||    
T  10921394 aaatcaaaatatttgagttttt-aaataatagttacttattttagaatgcttaaagagtgttcagagga-acttgttaacgagaccctt 10921308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 345 - 396
Target Start/End: Original strand, 11623560 - 11623611
Alignment:
Q  345 cttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccc 396  Q
    |||| |||| || |||||||||||||||||| |||||| |||||||||||||    
T  11623560 cttaatttaaaaagcttaaagagtgccccggagacactcgttaacaagaccc 11623611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 300 - 377
Target Start/End: Complemental strand, 1511399 - 1511321
Alignment:
Q  300 aatgtattgaaaatcgaaatatttgac-tttttgaaagaataattgcttattttagaatgcttaaagagtgccccgggg 377  Q
    |||| |||| |||| ||||| |||||| |||||||  |||||||| ||| |||| | ||||||||||||||||||||||    
T  1511399 aatgcattggaaattgaaatctttgacatttttgatggaataatttcttcttttggcatgcttaaagagtgccccgggg 1511321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 310 - 352
Target Start/End: Original strand, 24658488 - 24658530
Alignment:
Q  310 aaatcgaaatatttgactttttgaaagaataattgcttatttt 352  Q
    |||||||||||||| ||||||| ||||||||||| ||||||||    
T  24658488 aaatcgaaatatttaacttttttaaagaataatttcttatttt 24658530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 306 - 364
Target Start/End: Original strand, 44882029 - 44882087
Alignment:
Q  306 ttgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaa 364  Q
    ||||||||| |||||||| ||||||  |||||||||||| |||||||| ||| ||||||    
T  44882029 ttgaaaatcaaaatatttaacttttaaaaagaataattgtttattttaaaatacttaaa 44882087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 308 - 398
Target Start/End: Original strand, 46188630 - 46188718
Alignment:
Q  308 gaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccctt 398  Q
    |||||||||| ||||||||||| | ||| ||||||| |||||||| ||||||||||| | ||  ||||||| ||| |||||||| ||||||    
T  46188630 gaaaatcgaa-tatttgactttcttaaacaataattacttattttggaatgcttaaaaactg-tccggggatactcgttaacaaaaccctt 46188718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 394
Target Start/End: Original strand, 4305201 - 4305278
Alignment:
Q  317 aatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagac 394  Q
    ||||||||||||||| ||| ||||  | || | ||||| || ||||||||||||||| ||| |||| |||||||||||    
T  4305201 aatatttgacttttttaaaaaatatattctaaatttagtatccttaaagagtgccccaggggcactcgttaacaagac 4305278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 366
Target Start/End: Original strand, 13804883 - 13804956
Alignment:
Q  293 tgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaaga 366  Q
    |||||| |||| |||| |||||||| |||||||||||||||| |||| ||| |||| ||  |||| ||||||||    
T  13804883 tgtattcaatgcattggaaatcgaagtatttgactttttgaaggaatgatttcttaattcggaatccttaaaga 13804956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 396
Target Start/End: Original strand, 23554707 - 23554811
Alignment:
Q  291 cgtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaaca 390  Q
    |||||||||| || |||| |||||| ||  ||||||||||| ||| ||||||| |||  || ||||| ||||||||||| ||||||| |||| |||| ||    
T  23554707 cgtgtatttattgcattggaaatcgtaaactttgactttttaaaa-aataatttctttattaagaatccttaaagagtgtcccgggggcactcgttagca 23554805  T
Q  391 agaccc 396  Q
     |||||    
T  23554806 ggaccc 23554811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 396
Target Start/End: Original strand, 25299075 - 25299175
Alignment:
Q  296 atttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaa-tgcttaaagagtgccccggggacacttgttaacaagac 394  Q
    ||||| || ||||||||| ||||| |||   ||||| ||||||||||| ||| | |||||| |||||||| |||||  |||||||||| |||||||||||    
T  25299075 atttattgcattgaaaattgaaatctttactttttttaaagaataatttctt-tattagaaatgcttaaaaagtgcttcggggacactcgttaacaagac 25299173  T
Q  395 cc 396  Q
    ||    
T  25299174 cc 25299175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 365
Target Start/End: Original strand, 43749524 - 43749581
Alignment:
Q  308 gaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaag 365  Q
    |||||| ||||||||||||||||| | |||||||||  || ||||||||| |||||||    
T  43749524 gaaaattgaaatatttgactttttaatagaataatttattcttttagaatccttaaag 43749581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 353
Target Start/End: Original strand, 46711956 - 46712009
Alignment:
Q  300 aatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttatttta 353  Q
    |||| |||| ||||| |||| ||||||||||| ||||||||||| |||||||||    
T  46711956 aatgcattggaaatcaaaatgtttgacttttttaaagaataattacttatttta 46712009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 345 - 398
Target Start/End: Complemental strand, 46725676 - 46725623
Alignment:
Q  345 cttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccctt 398  Q
    |||| |||||||||||||||||||  |||| ||||||| ||||| |||||||||    
T  46725676 cttaatttagaatgcttaaagagtatcccgtggacactcgttaataagaccctt 46725623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 396
Target Start/End: Original strand, 49003114 - 49003201
Alignment:
Q  305 attgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccc 396  Q
    |||| |||| ||||| ||||||||||| |  ||||||||  || || || |||||||||||||||||||  ||||||| |||||||||||||    
T  49003114 attggaaattgaaatctttgacttttttatggaataatt--ttcttataaaatgcttaaagagtgcccc--ggacactcgttaacaagaccc 49003201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 369
Target Start/End: Complemental strand, 53040541 - 53040464
Alignment:
Q  292 gtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtg 369  Q
    ||||||| |||  |||| |||| ||| ||||||| ||||| ||| ||||||| |||| |||||||| |||||||||||    
T  53040541 gtgtattcaatacattggaaattgaagtatttgaattttttaaataataatttcttaatttagaatccttaaagagtg 53040464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 397
Target Start/End: Complemental strand, 54911265 - 54911168
Alignment:
Q  300 aatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccct 397  Q
    ||||||||||||||  |||  ||| || |||| |||||||||||  ||| ||||||||| ||||||| ||||||  |  ||||||||||||| |||||    
T  54911265 aatgtattgaaaatttaaaactttaacattttaaaagaataattatttaatttagaatgtttaaagattgccccaagatcacttgttaacaacaccct 54911168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 302 - 398
Target Start/End: Original strand, 1680502 - 1680598
Alignment:
Q  302 tgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccctt 398  Q
    |||| |||||||| |||||||||||||||| | | | |||||  || |||| |||| |||||||| ||| ||||  ||||| |||||||||| ||||    
T  1680502 tgtaatgaaaatcaaaatatttgacttttttataaattaatttattctttttgaatccttaaagaatgctccggaaacactcgttaacaagatcctt 1680598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 310 - 373
Target Start/End: Original strand, 18399211 - 18399275
Alignment:
Q  310 aaatcgaaatatttgactttttga-aagaataattgcttattttagaatgcttaaagagtgcccc 373  Q
    |||||||||||||||||||||| | || ||| ||| ||| |||| |||| |||||||||||||||    
T  18399211 aaatcgaaatatttgacttttttataaaaattatttcttcttttggaatccttaaagagtgcccc 18399275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 295 - 343
Target Start/End: Complemental strand, 30299349 - 30299301
Alignment:
Q  295 tatttaatgtattgaaaatcgaaatatttgactttttgaaagaataatt 343  Q
    ||||||||| ||||||||| ||| || |||||||||| |||||||||||    
T  30299349 tatttaatgcattgaaaattgaattacttgacttttttaaagaataatt 30299301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 375
Target Start/End: Complemental strand, 38388769 - 38388701
Alignment:
Q  307 tgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccgg 375  Q
    |||||||| |||||||||||||||| | | | ||||| ||| |||||||||  ||||| ||||||||||    
T  38388769 tgaaaatcaaaatatttgacttttttataaattaatttcttcttttagaatctttaaatagtgccccgg 38388701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 310 - 398
Target Start/End: Original strand, 38705002 - 38705090
Alignment:
Q  310 aaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccctt 398  Q
    ||||| ||||||||||| |||| | | |||||||  || |||| |||| |||||||||| |  ||||| |||| |||||||||||||||    
T  38705002 aaatcaaaatatttgacatttttataaaataattttttctttttgaattcttaaagagtacttcgggggcactcgttaacaagaccctt 38705090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 52309241 - 52309185
Alignment:
Q  291 cgtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgctt 347  Q
    |||||| | |||| |||| |||||||||||||| || |||| |||||||||||||||    
T  52309241 cgtgtaatcaatgcattggaaatcgaaatattttacctttttaaagaataattgctt 52309185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 2e-22; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 292 - 394
Target Start/End: Original strand, 53737828 - 53737930
Alignment:
Q  292 gtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaa 391  Q
    ||||||| |||| |||| |||||||||||||||| ||||| ||||||||||| |||||||| ||| ||||||||||||||| |||| |||| |||| |||    
T  53737828 gtgtattcaatgcattggaaatcgaaatatttgaattttttaaagaataatttcttattttggaacgcttaaagagtgccctgggggcactcgttagcaa 53737927  T
Q  392 gac 394  Q
    |||    
T  53737928 gac 53737930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 292 - 393
Target Start/End: Complemental strand, 48098024 - 48097923
Alignment:
Q  292 gtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaa 391  Q
    ||||||||||||||||| |||| ||| ||||| ||||||| ||||||||||| |||| |||||||| |||||| ||||| |||| |||||| ||||||||    
T  48098024 gtgtatttaatgtattggaaattgaactatttaacttttttaaagaataatttcttaatttagaatacttaaaaagtgctccggagacactcgttaacaa 48097925  T
Q  392 ga 393  Q
    ||    
T  48097924 ga 48097923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 292 - 395
Target Start/End: Original strand, 50086442 - 50086544
Alignment:
Q  292 gtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaa 391  Q
    ||||||| |||| |||||||||| |||||||||| ||||| |||||||||||| ||||||| ||||| |||||||||  ||||||| |||| ||||||||    
T  50086442 gtgtattcaatgcattgaaaatcaaaatatttgatttttttaaagaataattgtttattttggaatgtttaaagagtttcccgggg-cactcgttaacaa 50086540  T
Q  392 gacc 395  Q
    ||||    
T  50086541 gacc 50086544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 292 - 397
Target Start/End: Complemental strand, 51834986 - 51834881
Alignment:
Q  292 gtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaa 391  Q
    |||||||||||| |||| ||||   |||| |||||||||| |||||||||||||| | ||||| |||||||||||||| |||||||| |||  |||||||    
T  51834986 gtgtatttaatgcattggaaattataatagttgactttttaaaagaataattgctaaatttaggatgcttaaagagtgtcccggggaaactcattaacaa 51834887  T
Q  392 gaccct 397  Q
    ||||||    
T  51834886 gaccct 51834881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 246 - 398
Target Start/End: Complemental strand, 39275079 - 39274928
Alignment:
Q  246 ggggcattagttaaagaccataagtggtaggtatttnnnnnnntgcgtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgc 345  Q
    |||||| |||||||||||||| |||| || ||||||       ||||| |||| |||| |||| |||| ||||||||||| ||||| ||| ||||||||     
T  39275079 ggggcactagttaaagaccatgagtgataagtatttatcaaaatgcgtctattcaatgcattggaaattgaaatatttgattttttaaaaaaataattgt 39274980  T
Q  346 ttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccctt 398  Q
    ||| ||| ||||||||||| |||||||||||| |||| ||||| |||| ||||    
T  39274979 ttacttttgaatgcttaaatagtgccccgggg-cactcgttaataagatcctt 39274928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 292 - 397
Target Start/End: Original strand, 49532285 - 49532389
Alignment:
Q  292 gtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaa 391  Q
    |||||||||||| |||| |||| ||| ||||||| ||| | ||||||||||| |||| ||| ||||||||| |||||| ||||||| |||| ||||||||    
T  49532285 gtgtatttaatgcattggaaattgaattatttgattttat-aaagaataatttcttaatttggaatgcttacagagtgtcccgggggcactcgttaacaa 49532383  T
Q  392 gaccct 397  Q
    ||||||    
T  49532384 gaccct 49532389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 394
Target Start/End: Original strand, 54700896 - 54700978
Alignment:
Q  310 aaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagac 394  Q
    ||||| ||||||||||||||||  |||||||||| ||||||||| ||||||||||||||| ||||  |||||| |||||||||||    
T  54700896 aaatcaaaatatttgacttttt--aagaataattacttattttaaaatgcttaaagagtgtcccgatgacactcgttaacaagac 54700978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 292 - 396
Target Start/End: Original strand, 45900183 - 45900287
Alignment:
Q  292 gtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaa 391  Q
    ||||||| |||| |||| |||| |  ||| |||||||| | |||||||||||||| | ||||| |||||||||||||||| ||||| |||| ||||||||    
T  45900183 gtgtattgaatgcattggaaattgtgatagttgactttataaaagaataattgctaaatttaggatgcttaaagagtgcctcgggggcactcgttaacaa 45900282  T
Q  392 gaccc 396  Q
    |||||    
T  45900283 gaccc 45900287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 289 - 397
Target Start/End: Complemental strand, 47560700 - 47560593
Alignment:
Q  289 tgcgtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaa 388  Q
    |||||||| | |||||||| |||||| ||| |||||| ||||| ||| |||||||||||||||| ||||| |||||||||| | ||  |||||| |||||    
T  47560700 tgcgtgtaatcaatgtattaaaaatcaaaacatttgatttttttaaa-aataattgcttattttggaatgattaaagagtgtctcgaagacactcgttaa 47560602  T
Q  389 caagaccct 397  Q
    |||||||||    
T  47560601 caagaccct 47560593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 292 - 398
Target Start/End: Original strand, 42957005 - 42957112
Alignment:
Q  292 gtgtatttaatgtattgaaaatcgaaatatttgactttttgaaag-aataattgcttattttagaatgcttaaagagtgccccggggacacttgttaaca 390  Q
    ||||| |||||| |||| |||| ||||||||||| ||||| |||  ||||| |||||||||||||||| |||||||||| || || ||| || |||||||    
T  42957005 gtgtaattaatgcattggaaattgaaatatttgatttttttaaaataataactgcttattttagaatgtttaaagagtgtcctggtgactctcgttaaca 42957104  T
Q  391 agaccctt 398  Q
    ||||||||    
T  42957105 agaccctt 42957112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 305 - 368
Target Start/End: Original strand, 50343883 - 50343946
Alignment:
Q  305 attgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagt 368  Q
    |||||||||  |||||||||||||||| ||||||||||| ||||||||| ||||||||||||||    
T  50343883 attgaaaattaaaatatttgacttttttaaagaataattacttattttaaaatgcttaaagagt 50343946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 292 - 398
Target Start/End: Complemental strand, 8297943 - 8297837
Alignment:
Q  292 gtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaa 391  Q
    ||||||| |||| |||| |||| | || | ||||| |||| ||||||||||| || | ||| | |||||||||||||||||||||| |||| ||||||||    
T  8297943 gtgtattgaatgcattggaaattgtaacagttgacattttaaaagaataattactaaatttgggatgcttaaagagtgccccgggggcactcgttaacaa 8297844  T
Q  392 gaccctt 398  Q
    |||||||    
T  8297843 gaccctt 8297837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 293 - 395
Target Start/End: Original strand, 42370349 - 42370450
Alignment:
Q  293 tgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaag 392  Q
    |||| |||||| |||||||||  |||||||| ||||||| ||||||||||||||| |||| | ||||||||||||||||||    ||||| |||||||||    
T  42370349 tgtaattaatgcattgaaaattaaaatattttacttttt-aaagaataattgcttgttttggtatgcttaaagagtgccccaaaaacactcgttaacaag 42370447  T
Q  393 acc 395  Q
    |||    
T  42370448 acc 42370450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 300 - 369
Target Start/End: Complemental strand, 29352533 - 29352464
Alignment:
Q  300 aatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtg 369  Q
    |||| ||||||| || |||||||| | ||||| |||||||||||||||||||||||||| ||||||||||    
T  29352533 aatgcattgaaagtcaaaatattttattttttaaaagaataattgcttattttagaatgattaaagagtg 29352464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 300 - 396
Target Start/End: Original strand, 38945061 - 38945158
Alignment:
Q  300 aatgtattgaaaatcgaaata-tttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccc 396  Q
    ||||| ||| ||||||||| | ||||||||||| | |||||||||||||| ||| ||  |||||||||||||| ||||| |||| |||||||||||||    
T  38945061 aatgtcttggaaatcgaaaaagtttgactttttaagagaataattgcttaatttggatagcttaaagagtgccgcgggggcactcgttaacaagaccc 38945158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 308 - 396
Target Start/End: Complemental strand, 20390081 - 20389993
Alignment:
Q  308 gaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccc 396  Q
    ||||||| |||||||||||||||| | | ||| ||| ||| |||| |||| |||||||| ||||||||| ||||| |||||||||||||    
T  20390081 gaaaatcaaaatatttgacttttttataaaattatttcttgttttggaattcttaaagaatgccccgggaacactcgttaacaagaccc 20389993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 293 - 397
Target Start/End: Original strand, 23016257 - 23016361
Alignment:
Q  293 tgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaag 392  Q
    |||||| |||| |||| |||| ||||| |||||||| || ||| ||||||| |||| ||| ||||||| |||||||||||||||| | || |||| ||||    
T  23016257 tgtattcaatgcattggaaattgaaatgtttgacttctttaaataataatttcttaatttggaatgctcaaagagtgccccgggggcgctcgttagcaag 23016356  T
Q  393 accct 397  Q
    |||||    
T  23016357 accct 23016361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 310 - 394
Target Start/End: Original strand, 28005295 - 28005379
Alignment:
Q  310 aaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagac 394  Q
    ||||| |||||||||||||||| |||  ||||||||||||||||| ||| ||||||||| || |||  ||||| |||||||||||    
T  28005295 aaatcaaaatatttgacttttttaaaagataattgcttattttagtatgtttaaagagtacctcggatacactcgttaacaagac 28005379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 300 - 399
Target Start/End: Original strand, 32055382 - 32055481
Alignment:
Q  300 aatgtattgaaaatcgaaa-tatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccctt 398  Q
    |||| |||| ||||||||| | ||||||||||  ||||||||||||||| |||| | |||||||||||||| ||||||| |||| || ||||||||||||    
T  32055382 aatgcattggaaatcgaaaatgtttgacttttctaaagaataattgcttgtttttgtatgcttaaagagtg-cccgggggcactcgtcaacaagaccctt 32055480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 305 - 372
Target Start/End: Original strand, 44690310 - 44690377
Alignment:
Q  305 attgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccc 372  Q
    ||||||||||||||||||| ||||||| |||  |||||| |||||||||| ||| |||||||||||||    
T  44690310 attgaaaatcgaaatatttaacttttttaaaagataattacttattttagtatgtttaaagagtgccc 44690377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 310 - 396
Target Start/End: Original strand, 49446645 - 49446732
Alignment:
Q  310 aaatcgaaatatttgactttttgaa-agaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccc 396  Q
    ||||||||||||||||||||||  | | ||||| | ||| |||| |||| |||||||||||||||| || ||||||||||||||||||    
T  49446645 aaatcgaaatatttgactttttttataaaataacttcttcttttggaatccttaaagagtgccccgagggcacttgttaacaagaccc 49446732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 306 - 369
Target Start/End: Complemental strand, 50775019 - 50774956
Alignment:
Q  306 ttgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtg 369  Q
    ||||||||| |||||||| ||||||| ||||||||||| ||||||||||||| |||||| ||||    
T  50775019 ttgaaaatcaaaatatttaacttttttaaagaataattacttattttagaatacttaaaaagtg 50774956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 302 - 368
Target Start/End: Complemental strand, 51105984 - 51105918
Alignment:
Q  302 tgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagt 368  Q
    ||||||||||||  |||||||||||||||| ||| |||||||| ||||||||||||  |||||||||    
T  51105984 tgtattgaaaattaaaatatttgacttttttaaataataattgtttattttagaatatttaaagagt 51105918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 300 - 369
Target Start/End: Complemental strand, 10576052 - 10575984
Alignment:
Q  300 aatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtg 369  Q
    |||| |||| ||||| |||||||||| ||||||||| ||||||| ||||||||| |||||||||||||||    
T  10576052 aatgcattggaaatcaaaatatttgattttttgaaa-aataattacttattttaaaatgcttaaagagtg 10575984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 293 - 398
Target Start/End: Complemental strand, 20394709 - 20394604
Alignment:
Q  293 tgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaag 392  Q
    |||||| ||||||||| |||| | |||| || ||||||| ||||||||||| || | ||| | ||||||||||||||| | || |||||| ||||||||     
T  20394709 tgtattgaatgtattggaaattgtaatagttcactttttaaaagaataattactaaatttgggatgcttaaagagtgctctggagacactcgttaacaaa 20394610  T
Q  393 accctt 398  Q
    ||||||    
T  20394609 accctt 20394604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 305 - 390
Target Start/End: Original strand, 49951737 - 49951822
Alignment:
Q  305 attgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaaca 390  Q
    ||||||||| ||||  |||||| |||| ||||||||||| |||| ||||| ||||||||||||| ||||| || |||| |||||||    
T  49951737 attgaaaattgaaaactttgacattttaaaagaataattacttaatttagcatgcttaaagagtaccccgagggcactagttaaca 49951822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 310 - 393
Target Start/End: Original strand, 24395248 - 24395331
Alignment:
Q  310 aaatcgaaatatttgac-tttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaaga 393  Q
    ||||||||||||||||| ||||| | | | ||||| ||| ||||||||| ||||||||||||||| |||||||| ||||||||||    
T  24395248 aaatcgaaatatttgaccttttttataaattaatttcttcttttagaatccttaaagagtgcccc-gggacactcgttaacaaga 24395331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 317 - 393
Target Start/End: Complemental strand, 41462096 - 41462020
Alignment:
Q  317 aatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaaga 393  Q
    |||| |||||||||| ||||||||||| || | | || |||||||||||||||| || |||||||| ||||||||||    
T  41462096 aatagttgactttttaaaagaataattactaaatataaaatgcttaaagagtgctccagggacactcgttaacaaga 41462020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 310 - 397
Target Start/End: Original strand, 39727606 - 39727692
Alignment:
Q  310 aaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccct 397  Q
    |||| ||||||||||||||||| | |||||||||  || ||||||||| ||||||| ||||||| || ||||| |||||||| |||||    
T  39727606 aaattgaaatatttgacttttt-atagaataatttattcttttagaatccttaaagtgtgccccaggaacactcgttaacaaaaccct 39727692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 310 - 396
Target Start/End: Original strand, 30978700 - 30978786
Alignment:
Q  310 aaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccc 396  Q
    |||| ||| ||||||||||||| ||  ||| ||| |||| ||| |||||||||||||||||||| ||| ||||  ||||||||||||    
T  30978700 aaattgaactatttgacttttttaataaatcatttcttaatttggaatgcttaaagagtgccccaggggcactccttaacaagaccc 30978786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 310 - 396
Target Start/End: Original strand, 44646577 - 44646663
Alignment:
Q  310 aaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccc 396  Q
    |||||||||||||||||||| | | | |||| || ||| ||||  ||| |||||||| |||||||||| |||| |||||||||||||    
T  44646577 aaatcgaaatatttgactttattataaaatagtttcttcttttgaaatccttaaagaatgccccgggggcactcgttaacaagaccc 44646663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 291 - 364
Target Start/End: Complemental strand, 4394981 - 4394908
Alignment:
Q  291 cgtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaa 364  Q
    |||||||| |||||||| |||||  |||||||||| ||||| ||||||||||| |||| |||| |||| |||||    
T  4394981 cgtgtattcaatgtattaaaaattaaaatatttgatttttttaaagaataattacttaatttaaaatgtttaaa 4394908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 300 - 397
Target Start/End: Complemental strand, 7628023 - 7627927
Alignment:
Q  300 aatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccct 397  Q
    ||||||||| |||| |||| |||||||||||  |  |||||||| ||  |||| |||||||||||||||| |||||||||| | ||||||||| ||||    
T  7628023 aatgtattggaaattgaaacatttgacttttctatggaataatttctccttttggaatgcttaaagagtg-cccggggacattcgttaacaaggccct 7627927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 300 - 397
Target Start/End: Original strand, 41370210 - 41370307
Alignment:
Q  300 aatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccct 397  Q
    |||| ||||||||| ||||||||| |||||||  |  ||||||| |||| ||| || ||||||| |||||| ||||  ||||| ||||||||||||||    
T  41370210 aatgcattgaaaattgaaatatttaacttttttgagaaataatttcttaatttggattgcttaatgagtgctccggaaacactcgttaacaagaccct 41370307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 292 - 369
Target Start/End: Complemental strand, 51736426 - 51736349
Alignment:
Q  292 gtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtg 369  Q
    ||||||| ||||||||||||||   |||| |||||||||| |||||||||||||| | ||| ||||  ||||||||||    
T  51736426 gtgtattcaatgtattgaaaattataatagttgactttttaaaagaataattgctaaatttggaatcattaaagagtg 51736349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 305 - 398
Target Start/End: Original strand, 52650737 - 52650830
Alignment:
Q  305 attgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccctt 398  Q
    ||||||||| ||||  |||||| |||  ||||||||||| |||| ||||| ||| ||||||||||  |||| | |||| |||||||||||||||    
T  52650737 attgaaaattgaaaattttgacatttgtaaagaataatttcttaatttagcatgtttaaagagtgttccggaggcactcgttaacaagaccctt 52650830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 396
Target Start/End: Complemental strand, 2063547 - 2063444
Alignment:
Q  292 gtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaa 391  Q
    |||||||||||  |||| |||| ||| | ||||||||||| ||||||||| | | || ||||| ||||||||||||||  |||||  |||| ||||||||    
T  2063547 gtgtatttaatacattggaaattgaactgtttgacttttttaaagaataacttcctaatttagcatgcttaaagagtg-tccgggagcactcgttaacaa 2063449  T
Q  392 gaccc 396  Q
    |||||    
T  2063448 gaccc 2063444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 310 - 370
Target Start/End: Complemental strand, 24369461 - 24369401
Alignment:
Q  310 aaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgc 370  Q
    |||| ||||| ||||||||||  |||||||||||| ||||||||| ||| |||||||||||    
T  24369461 aaattgaaatgtttgacttttataaagaataattgtttattttagtatgtttaaagagtgc 24369401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 320 - 396
Target Start/End: Original strand, 31072532 - 31072608
Alignment:
Q  320 atttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccc 396  Q
    |||||||||||| |||||||| || || | ||||  || ||||||||||| ||||||| |||| |||||||||||||    
T  31072532 atttgactttttcaaagaatattttctaaatttatgatccttaaagagtggcccgggggcactcgttaacaagaccc 31072608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 305 - 364
Target Start/End: Original strand, 10095687 - 10095746
Alignment:
Q  305 attgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaa 364  Q
    ||||||||||||||||||||| ||||| |||  ||||||| ||||||||| ||| |||||    
T  10095687 attgaaaatcgaaatatttgatttttttaaaagataattgtttattttagtatgtttaaa 10095746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 310 - 365
Target Start/End: Original strand, 16822316 - 16822371
Alignment:
Q  310 aaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaag 365  Q
    |||| ||||||||||| ||||| ||| ||||||||||||||||| |||| ||||||    
T  16822316 aaattgaaatatttgattttttaaaaaaataattgcttattttaaaatgtttaaag 16822371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 306 - 393
Target Start/End: Original strand, 41956478 - 41956565
Alignment:
Q  306 ttgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaaga 393  Q
    |||||||| ||||||||| | ||| | |||||||| || |||||||| || ||||||||||||| || |||| |||| ||||| ||||    
T  41956478 ttgaaaattgaaatatttaaatttcttaaagaatactttcttattttggattgcttaaagagtgtcctgggggcactcgttaataaga 41956565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 293 - 368
Target Start/End: Original strand, 47995772 - 47995847
Alignment:
Q  293 tgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagt 368  Q
    |||||| |||| ||||||||| | |||| || ||||||| ||||| ||||| || | |||||||||||||||||||    
T  47995772 tgtattgaatgcattgaaaattgtaataattaactttttaaaagagtaattactaaatttagaatgcttaaagagt 47995847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 328 - 391
Target Start/End: Complemental strand, 53261594 - 53261531
Alignment:
Q  328 ttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaa 391  Q
    |||| ||||||||||| |||| ||||| |||||||||||||| || |||| |||| ||||||||    
T  53261594 tttttaaagaataattacttaatttagcatgcttaaagagtgtcctgggggcactcgttaacaa 53261531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 300 - 398
Target Start/End: Original strand, 6316848 - 6316946
Alignment:
Q  300 aatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccctt 398  Q
    |||| |||||||||| |||| |||| |||||| | | ||| ||| ||| ||||  |||  |||||||||||||||| | |||| |||||||||||||||    
T  6316848 aatgcattgaaaatcaaaatctttgccttttttataaaattatttcttcttttgaaatctttaaagagtgccccggaggcactcgttaacaagaccctt 6316946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 292 - 394
Target Start/End: Original strand, 7852578 - 7852680
Alignment:
Q  292 gtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaa 391  Q
    ||||||| |||| ||||||||| | |||| || | ||||| ||||||||||| || | ||||| |||||||||||||| | ||  |||||| |||||| |    
T  7852578 gtgtattaaatgcattgaaaattgtaatagttaattttttaaaagaataattactaaatttaggatgcttaaagagtgtctcgaagacactcgttaacga 7852677  T
Q  392 gac 394  Q
    |||    
T  7852678 gac 7852680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 300 - 377
Target Start/End: Original strand, 39827190 - 39827268
Alignment:
Q  300 aatgtattgaaaatcgaaatatttgactttttgaaagaataa-ttgcttattttagaatgcttaaagagtgccccgggg 377  Q
    |||| ||||||||| ||||| |||||| |||| ||||||||| |||||| ||||   ||||||||||||||| ||||||    
T  39827190 aatgaattgaaaattgaaatttttgacatttttaaagaataatttgcttgttttgatatgcttaaagagtgctccgggg 39827268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 368
Target Start/End: Complemental strand, 2818424 - 2818355
Alignment:
Q  299 taatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagt 368  Q
    ||||| |||| |||| ||| | |||||| |||| ||||||||||| |||| |||| ||||||||||||||    
T  2818424 taatgcattggaaattgaactttttgaccttttaaaagaataatttcttaatttaaaatgcttaaagagt 2818355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 369
Target Start/End: Complemental strand, 25196208 - 25196131
Alignment:
Q  292 gtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtg 369  Q
    ||||| ||||||| ||| ||||| |||||||||||||||| | | | |||||  || ||||||||| |||||||||||    
T  25196208 gtgtaattaatgtcttggaaatcaaaatatttgacttttttataaattaattttttcttttagaatccttaaagagtg 25196131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 370
Target Start/End: Complemental strand, 31262970 - 31262910
Alignment:
Q  309 aaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgc 370  Q
    ||||||||||  |||||| |||| ||| ||||||| |||| |||||||||||||||||||||    
T  31262970 aaaatcgaaaactttgacatttttaaa-aataattacttaatttagaatgcttaaagagtgc 31262910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 373
Target Start/End: Original strand, 35180647 - 35180720
Alignment:
Q  300 aatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgcccc 373  Q
    |||||||||||||| |||| |||||||||||  |  |||||||| ||  |||  ||||||||||||||||||||    
T  35180647 aatgtattgaaaattgaaacatttgacttttctatggaataatttctcctttaggaatgcttaaagagtgcccc 35180720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 300 - 396
Target Start/End: Original strand, 9802658 - 9802753
Alignment:
Q  300 aatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccc 396  Q
    ||||||| | ||||| |||||||||||||||| | | |||||||  || |||||||||  |||||||||| | |||| | ||| |||||||||||||    
T  9802658 aatgtatcggaaatcaaaatatttgacttttttataaaataattttttcttttagaat-tttaaagagtgtctcgggaatactcgttaacaagaccc 9802753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 305 - 369
Target Start/End: Complemental strand, 37179750 - 37179686
Alignment:
Q  305 attgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtg 369  Q
    |||| |||||||||| ||||||||||  ||| ||||||| ||| |||| | ||||||||||||||    
T  37179750 attggaaatcgaaatgtttgacttttctaaaaaataattacttgttttggtatgcttaaagagtg 37179686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 322 - 397
Target Start/End: Complemental strand, 43956179 - 43956106
Alignment:
Q  322 ttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccct 397  Q
    |||| |||||||| ||||||| | | | ||||| || ||||||||||| ||  |||||||||||||||||||||||    
T  43956179 ttgattttttgaaggaataatcgttaaatttaggatccttaaagagtgtcc--gggacacttgttaacaagaccct 43956106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 300 - 364
Target Start/End: Original strand, 47247814 - 47247878
Alignment:
Q  300 aatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaa 364  Q
    |||||||||||||| |||| || | || |||| ||  ||||||||||||||||| ||||||||||    
T  47247814 aatgtattgaaaattgaaacatataacatttttaataaataattgcttattttataatgcttaaa 47247878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 308 - 396
Target Start/End: Complemental strand, 47937919 - 47937832
Alignment:
Q  308 gaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccc 396  Q
    |||||| ||||  ||||||||||| ||||||||||| | || ||||| ||| ||||||||| | || || ||||| |||||||||||||    
T  47937919 gaaaattgaaaactttgacttttttaaagaataattacataatttagtatgtttaaagagtactcc-ggcacactcgttaacaagaccc 47937832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 391
Target Start/End: Original strand, 50341901 - 50341998
Alignment:
Q  292 gtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaa 391  Q
    ||||||| ||||  ||| |||| | |||| |||||||||| ||||||||||| || | ||| ||||||||| | ||||||||  ||||||| ||||||||    
T  50341901 gtgtattgaatgcgttggaaattgtaatagttgactttttaaaagaataattactaaatttggaatgcttacaaagtgcccc--ggacactcgttaacaa 50341998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 310 - 374
Target Start/End: Complemental strand, 53919922 - 53919858
Alignment:
Q  310 aaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccg 374  Q
    |||| ||||| ||||||||||| | |||||||||  || ||||  ||||||||||||||||||||    
T  53919922 aaattgaaatttttgacttttttatagaataatttattcttttgaaatgcttaaagagtgccccg 53919858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 1e-20; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 302 - 397
Target Start/End: Original strand, 34861256 - 34861351
Alignment:
Q  302 tgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccct 397  Q
    ||||||| |||| ||||| |||||| |||| ||| ||||||| |||| |||||||||||||||||||||||| ||| |||| ||||||||||||||    
T  34861256 tgtattggaaattgaaatgtttgacatttttaaaaaataattacttaatttagaatgcttaaagagtgcccccggggcactcgttaacaagaccct 34861351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 310 - 396
Target Start/End: Complemental strand, 40570744 - 40570657
Alignment:
Q  310 aaatcgaaatatttgactttttgaaagaataattgcttattttagaat-gcttaaagagtgccccggggacacttgttaacaagaccc 396  Q
    |||||||||| ||||||||||| |||||||||||||| ||||| | || |||||||||||||||||||| |||| |||||||||||||    
T  40570744 aaatcgaaatgtttgacttttttaaagaataattgctaatttttggatagcttaaagagtgccccgggggcactcgttaacaagaccc 40570657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 300 - 398
Target Start/End: Complemental strand, 3047931 - 3047833
Alignment:
Q  300 aatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccctt 398  Q
    |||| |||| ||||||||| ||||||| |||| |||||| |||| |||| ||||| |||||||||||||||||||||| ||||  ||||||||||||||    
T  3047931 aatgcattggaaatcgaaaaatttgacatttttaaagaacaattacttaatttagcatgcttaaagagtgccccgggggcactctttaacaagaccctt 3047833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 300 - 370
Target Start/End: Original strand, 33744177 - 33744247
Alignment:
Q  300 aatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgc 370  Q
    |||| ||||||||||||||||||||||||||| ||| ||||||| ||||||||| ||||||||||||||||    
T  33744177 aatgcattgaaaatcgaaatatttgactttttaaaaaaataattacttattttaaaatgcttaaagagtgc 33744247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 291 - 399
Target Start/End: Complemental strand, 37705950 - 37705842
Alignment:
Q  291 cgtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaaca 390  Q
    |||||| |||||| |||||||||| ||| |||||| ||||  ||| ||||||| || ||||| ||||||||||||||||| |||||| |||| |||||||    
T  37705950 cgtgtaattaatgcattgaaaatcaaaacatttgagttttctaaaaaataattactcattttcgaatgcttaaagagtgctccgggggcactcgttaaca 37705851  T
Q  391 agacccttg 399  Q
    |||| ||||    
T  37705850 agactcttg 37705842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 305 - 396
Target Start/End: Complemental strand, 37976886 - 37976797
Alignment:
Q  305 attgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccc 396  Q
    |||||||||| |||||||||||||||| |||| ||||||  |||||||||||||||||||||||| ||||||| |||| |||| ||||||||    
T  37976886 attgaaaatcaaaatatttgacttttt-aaagtataattttttattttagaatgcttaaagagtgtcccgggg-cactcgttatcaagaccc 37976797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 293 - 396
Target Start/End: Complemental strand, 39150653 - 39150550
Alignment:
Q  293 tgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaag 392  Q
    |||||| |||| |||| |||| | |||| ||||||||||  |||||||||| || | ||||| |||||||||||||||||||||| |||| |||||||||    
T  39150653 tgtattgaatgcattgtaaattgtaatagttgactttttacaagaataattactaaatttaggatgcttaaagagtgccccgggggcactcgttaacaag 39150554  T
Q  393 accc 396  Q
    ||||    
T  39150553 accc 39150550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 292 - 369
Target Start/End: Complemental strand, 26687611 - 26687533
Alignment:
Q  292 gtgtatttaatgtattgaaaatcgaaatatttgact-ttttgaaagaataattgcttattttagaatgcttaaagagtg 369  Q
    ||||| |||||| ||||||||||||||||||||||| |||| |||  || |||||||||||||||||||||||||||||    
T  26687611 gtgtaattaatgcattgaaaatcgaaatatttgactttttttaaaagattattgcttattttagaatgcttaaagagtg 26687533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 292 - 397
Target Start/End: Complemental strand, 4772094 - 4771989
Alignment:
Q  292 gtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaa 391  Q
    ||||| |||||  ||||||||||||||||||  ||||||| ||| |||||||||||  ||| | |||||||||||||||||||| | |||| ||||||||    
T  4772094 gtgtaattaatacattgaaaatcgaaatattctactttttaaaaaaataattgcttcatttggtatgcttaaagagtgccccggaggcactcgttaacaa 4771995  T
Q  392 gaccct 397  Q
     |||||    
T  4771994 aaccct 4771989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 328 - 397
Target Start/End: Original strand, 31807850 - 31807919
Alignment:
Q  328 ttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccct 397  Q
    |||| ||||||||||| |||||||||||||||||||| ||||| |||||| |||| ||||||||||||||    
T  31807850 tttttaaagaataattacttattttagaatgcttaaatagtgctccgggggcactcgttaacaagaccct 31807919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 300 - 393
Target Start/End: Complemental strand, 39973956 - 39973863
Alignment:
Q  300 aatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaaga 393  Q
    |||| ||||||||| ||||  ||| || |||| ||||||||||| |||| ||||| |||||||||||||||||||| |||||| ||||||||||    
T  39973956 aatgcattgaaaattgaaaactttaacattttaaaagaataattacttaatttagcatgcttaaagagtgccccggagacactcgttaacaaga 39973863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 292 - 369
Target Start/End: Complemental strand, 44442322 - 44442245
Alignment:
Q  292 gtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtg 369  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||||| | || |||| ||| |||||| ||||    
T  44442322 gtgtatttaatgtattgaaaattgaaatatttgacttttttaaagaataatttcctaatttaaaatacttaaaaagtg 44442245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 300 - 396
Target Start/End: Complemental strand, 34445733 - 34445637
Alignment:
Q  300 aatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccc 396  Q
    |||| |||| |||||||||||||||||||||| | | | ||||| ||| |||| |||| |||||||||||| |||||| |||| |||||||||||||    
T  34445733 aatgcattggaaatcgaaatatttgacttttttataaattaatttcttcttttggaatccttaaagagtgctccgggggcactcgttaacaagaccc 34445637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 295 - 366
Target Start/End: Complemental strand, 14774171 - 14774100
Alignment:
Q  295 tatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaaga 366  Q
    |||| |||| ||||||||||||||||||||| ||||| ||  |||||||| |||||||||||||||||||||    
T  14774171 tattcaatgcattgaaaatcgaaatatttgattttttaaacaaataattgattattttagaatgcttaaaga 14774100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 300 - 374
Target Start/End: Complemental strand, 47031548 - 47031474
Alignment:
Q  300 aatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccg 374  Q
    ||||||||| |||||||||||||| | ||||| ||| ||||||| |||||||||||||| |||||||||| ||||    
T  47031548 aatgtattggaaatcgaaatattttattttttaaaaaaataattacttattttagaatgtttaaagagtgtcccg 47031474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 321 - 398
Target Start/End: Complemental strand, 16113962 - 16113885
Alignment:
Q  321 tttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccctt 398  Q
    |||||| |||||||| ||||||| |||| | ||| |||||||||||||||||||| | |||| |||||||||||||||    
T  16113962 tttgacattttgaaaaaataattacttaatatagtatgcttaaagagtgccccggaggcactcgttaacaagaccctt 16113885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 300 - 397
Target Start/End: Complemental strand, 25302136 - 25302039
Alignment:
Q  300 aatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccct 397  Q
    |||||||||||||||||||| ||||||||||| | | ||| |||  || |||| |||| |||||||||||  | ||||||||| ||||||||||||||    
T  25302136 aatgtattgaaaatcgaaatctttgacttttttatacaattattttttgttttggaatccttaaagagtgttctggggacactcgttaacaagaccct 25302039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 310 - 398
Target Start/End: Complemental strand, 7549897 - 7549809
Alignment:
Q  310 aaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccctt 398  Q
    |||||||||||||||||||||| | | ||| ||| ||| ||||  ||| ||||||||||| |||| ||||||| |||||||||||||||    
T  7549897 aaatcgaaatatttgacttttttataaaattatttcttcttttgaaattcttaaagagtgtcccgaggacactcgttaacaagaccctt 7549809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 300 - 396
Target Start/End: Complemental strand, 31043065 - 31042969
Alignment:
Q  300 aatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccc 396  Q
    |||| ||||||||| ||||  |||||| |||| ||| ||||||| |||| ||||||||||||||||| ||  ||||||||| | |||||||||||||    
T  31043065 aatgcattgaaaattgaaaactttgacatttttaaaaaataattacttaatttagaatgcttaaagactgtgccggggacattcgttaacaagaccc 31042969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 292 - 396
Target Start/End: Original strand, 34232741 - 34232845
Alignment:
Q  292 gtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaa 391  Q
    ||||||| || | ||||||||| | |||| |||||||||| |||||||||||||| | || || |||||||||||||| |||| |  |||| ||||||||    
T  34232741 gtgtattgaaagcattgaaaattgtaatagttgactttttaaaagaataattgctaaattaaggatgcttaaagagtgtcccgtgagcactcgttaacaa 34232840  T
Q  392 gaccc 396  Q
    |||||    
T  34232841 gaccc 34232845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 300 - 398
Target Start/End: Original strand, 4521050 - 4521146
Alignment:
Q  300 aatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccctt 398  Q
    |||| |||| |||| ||||| ||| ||||||| |||||||||| |||| |||||| |||||||||||||||||  | | |||| |||||||||||||||    
T  4521050 aatgcattggaaattgaaatgtttaacttttttaaagaataatcgcttgttttagtatgcttaaagagtgccc--gaggcactcgttaacaagaccctt 4521146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 310 - 369
Target Start/End: Original strand, 8836543 - 8836602
Alignment:
Q  310 aaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtg 369  Q
    |||||||||||||||||||||| |||||||||||| ||||||   |||||||||||||||    
T  8836543 aaatcgaaatatttgacttttttaaagaataattgtttatttcgaaatgcttaaagagtg 8836602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 300 - 363
Target Start/End: Original strand, 28672330 - 28672393
Alignment:
Q  300 aatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaa 363  Q
    |||| ||| |||||| |||||||||||||||| ||| |||||||| ||||||||||||||||||    
T  28672330 aatgcatttaaaatcaaaatatttgacttttttaaaaaataattgtttattttagaatgcttaa 28672393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 299 - 398
Target Start/End: Original strand, 39912251 - 39912350
Alignment:
Q  299 taatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccctt 398  Q
    |||| |||| ||||| ||| | ||||||||||| ||| ||||| | | || ||||| |||||||||||||| ||||||| |||| |||||||||||||||    
T  39912251 taatatattaaaaattgaattgtttgacttttttaaataataacttcctaatttagcatgcttaaagagtgtcccgggggcactcgttaacaagaccctt 39912350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 328 - 391
Target Start/End: Original strand, 42573839 - 42573902
Alignment:
Q  328 ttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaa 391  Q
    |||| ||||||||||| |||| ||||| |||||||||||||||||||| | |||||||||||||    
T  42573839 ttttaaaagaataattacttaatttagcatgcttaaagagtgccccggaggcacttgttaacaa 42573902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 292 - 398
Target Start/End: Complemental strand, 2864214 - 2864109
Alignment:
Q  292 gtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaa 391  Q
    ||||||| |||| |||| |||| | |||| |||||||||| ||||||||||| || | | | | ||| |||||||||| |||||||||||| ||||||||    
T  2864214 gtgtattgaatgcattggaaattgtaatagttgacttttt-aaagaataattcctaaatatgggatgtttaaagagtgtcccggggacactcgttaacaa 2864116  T
Q  392 gaccctt 398  Q
    |||||||    
T  2864115 gaccctt 2864109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 316 - 398
Target Start/End: Complemental strand, 45584587 - 45584505
Alignment:
Q  316 aaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccctt 398  Q
    |||||||| ||||||| | | ||||||| ||| |||| |||| ||||||||||||||||||| || | |||||||||||||||    
T  45584587 aaatatttaacttttttataaaataatttcttcttttggaatccttaaagagtgccccgggggcattcgttaacaagaccctt 45584505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 307 - 368
Target Start/End: Original strand, 64875 - 64936
Alignment:
Q  307 tgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagt 368  Q
    ||||| ||||||||||| || |||| |||||||||||| ||||||||||||| |||||||||    
T  64875 tgaaattcgaaatatttaacgtttttaaagaataattgtttattttagaatgtttaaagagt 64936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 300 - 373
Target Start/End: Original strand, 6983032 - 6983105
Alignment:
Q  300 aatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgcccc 373  Q
    |||| ||||||||| ||||||||||||| ||| || |||||||| |||| ||| |||| |||||||||||||||    
T  6983032 aatgcattgaaaattgaaatatttgactcttttaatgaataatttcttaatttggaatacttaaagagtgcccc 6983105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 304 - 368
Target Start/End: Complemental strand, 2633091 - 2633027
Alignment:
Q  304 tattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagt 368  Q
    ||||| ||||||||| |||| ||||||| ||| ||| |||||||||||||||||| |||||||||    
T  2633091 tattggaaatcgaaacatttaacttttttaaaaaattattgcttattttagaatgtttaaagagt 2633027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 305 - 364
Target Start/End: Original strand, 7481421 - 7481481
Alignment:
Q  305 attgaaaatcgaaatatttgactttttg-aaagaataattgcttattttagaatgcttaaa 364  Q
    ||||||||||||| ||||| |||||||  |||||||||||||||||||||| |||||||||    
T  7481421 attgaaaatcgaagtatttaactttttttaaagaataattgcttattttagcatgcttaaa 7481481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 300 - 396
Target Start/End: Complemental strand, 40053357 - 40053261
Alignment:
Q  300 aatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccc 396  Q
    |||||||||||||| ||||  |||||| |||| |||||| |||| | || ||||||||||||||| ||||| |  | |||||| |||||||||||||    
T  40053357 aatgtattgaaaattgaaaactttgacatttttaaagaacaattacctaatttagaatgcttaaaaagtgcactagagacactcgttaacaagaccc 40053261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 300 - 371
Target Start/End: Original strand, 26322658 - 26322729
Alignment:
Q  300 aatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgcc 371  Q
    ||||| ||| |||||||||| ||||| |||||  |||||||||||||||||||| |  ||||||||||||||    
T  26322658 aatgtcttggaaatcgaaatgtttgattttttttaagaataattgcttattttaaatagcttaaagagtgcc 26322729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 310 - 369
Target Start/End: Complemental strand, 36621987 - 36621928
Alignment:
Q  310 aaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtg 369  Q
    ||||| |||||||| ||||||| ||||||||||||||||||||  |||| ||||||||||    
T  36621987 aaatcaaaatatttaacttttttaaagaataattgcttattttgaaatgtttaaagagtg 36621928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 398
Target Start/End: Complemental strand, 40377095 - 40377008
Alignment:
Q  311 aatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccctt 398  Q
    |||| |||||||||||||||| | | ||| ||| ||| |||| |||| ||||||||||||||  ||| |||| |||||||||||||||    
T  40377095 aatcaaaatatttgacttttttataaaattatttcttcttttggaatccttaaagagtgcccaaggggcactcgttaacaagaccctt 40377008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 300 - 373
Target Start/End: Original strand, 4039644 - 4039717
Alignment:
Q  300 aatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgcccc 373  Q
    |||| |||| |||||||||||||||||||||| | | |||||||  || |||| |||| |||||||||||||||    
T  4039644 aatgcattggaaatcgaaatatttgacttttttataaaataatttattcttttggaatccttaaagagtgcccc 4039717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 292 - 369
Target Start/End: Complemental strand, 5417779 - 5417703
Alignment:
Q  292 gtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtg 369  Q
    |||||||||||||||||||||| | ||||||| | |||||| | |||||||| |||| |||||||| |||||| ||||    
T  5417779 gtgtatttaatgtattgaaaattgtaatattttattttttg-atgaataatttcttaatttagaatccttaaaaagtg 5417703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 293 - 366
Target Start/End: Original strand, 5423781 - 5423854
Alignment:
Q  293 tgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaaga 366  Q
    ||||||||||| ||||||||| ||| ||||| ||||||| |||||||||||   || |||| ||||||||||||    
T  5423781 tgtatttaatgcattgaaaattgaactatttaacttttttaaagaataattttctaatttaaaatgcttaaaga 5423854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 292 - 369
Target Start/End: Original strand, 9221257 - 9221334
Alignment:
Q  292 gtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtg 369  Q
    ||||||| | || |||| |||||||||||||| ||||||  |||||||||||| |||||||| |||  ||||||||||    
T  9221257 gtgtattaattgcattggaaatcgaaatatttaacttttctaaagaataattgtttattttaaaatagttaaagagtg 9221334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 393
Target Start/End: Complemental strand, 8794463 - 8794388
Alignment:
Q  317 aatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaaga 393  Q
    |||| |||||||||| ||||||||||| || | ||||| |||||||||||||  ||| || ||||||||||||||||    
T  8794463 aatagttgactttttaaaagaataattactaaatttaggatgcttaaagagtatccc-ggaacacttgttaacaaga 8794388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 372
Target Start/End: Original strand, 36321667 - 36321739
Alignment:
Q  300 aatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccc 372  Q
    |||| |||| |||||||||| ||| ||||||  ||||||||||| ||| |||| | |||||||||||||||||    
T  36321667 aatgcattggaaatcgaaatgtttaacttttctaaagaataattacttgttttggtatgcttaaagagtgccc 36321739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 396
Target Start/End: Original strand, 39914639 - 39914743
Alignment:
Q  292 gtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaa 391  Q
    ||||||| | || ||||||||| | |||| |||||||||| |||||| ||||| | | ||| | |||||||||||||| |||||   |||| ||||||||    
T  39914639 gtgtattgagtgcattgaaaattgtaatagttgactttttaaaagaacaattgttaaatttggtatgcttaaagagtgtcccggaagcactcgttaacaa 39914738  T
Q  392 gaccc 396  Q
    |||||    
T  39914739 gaccc 39914743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 369
Target Start/End: Complemental strand, 48812008 - 48811928
Alignment:
Q  289 tgcgtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtg 369  Q
    |||||||| | |||| |||| | || ||||||||| ||||||| ||||||||||| |||||||||  | ||||||||||||    
T  48812008 tgcgtgtaatcaatgcattggagattgaaatattttactttttaaaagaataattacttattttaacaggcttaaagagtg 48811928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 308 - 395
Target Start/End: Complemental strand, 25095665 - 25095578
Alignment:
Q  308 gaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagacc 395  Q
    |||||| ||||||||||||||||| |   ||||||| ||| ||||||||| ||||||||||| |  || |||||| | ||||||||||    
T  25095665 gaaaattgaaatatttgacttttttatgaaataatttcttcttttagaatccttaaagagtgtcatggagacactcgctaacaagacc 25095578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 311 - 394
Target Start/End: Original strand, 31745460 - 31745543
Alignment:
Q  311 aatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagac 394  Q
    ||||||||||||||||||| | | | |||||||  || |||||||||  |||||||||||| ||| | |||| |||||||||||    
T  31745460 aatcgaaatatttgactttattataaaataatttattcttttagaatctttaaagagtgcctcggaggcactagttaacaagac 31745543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 302 - 393
Target Start/End: Original strand, 33791783 - 33791874
Alignment:
Q  302 tgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaaga 393  Q
    ||||||| |||| |||| ||||||| |||| ||||||||||| |||| ||||| || ||||||||||   |  |||||||| ||||||||||    
T  33791783 tgtattggaaattgaaaaatttgacattttaaaagaataattacttaatttagcatacttaaagagtagtctagggacactcgttaacaaga 33791874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 321 - 396
Target Start/End: Complemental strand, 48947247 - 48947172
Alignment:
Q  321 tttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccc 396  Q
    |||||| |||| ||| ||||||| |||| ||||| ||||||||||| |||||| ||| |||| |||||||| ||||    
T  48947247 tttgacatttttaaaaaataattacttaatttagtatgcttaaagaatgccccaggggcactcgttaacaaaaccc 48947172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 351 - 397
Target Start/End: Complemental strand, 3506993 - 3506947
Alignment:
Q  351 ttagaatgcttaaagagtgccccggggacacttgttaacaagaccct 397  Q
    |||||||||||||||||||||||| || |||| |||||| |||||||    
T  3506993 ttagaatgcttaaagagtgccccgcgggcactcgttaacgagaccct 3506947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 316 - 398
Target Start/End: Complemental strand, 31652670 - 31652589
Alignment:
Q  316 aaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccctt 398  Q
    |||||||||||||||| | | ||||||| ||| ||| | ||| |||||||||| | |||| |||||| |||||||||||||||    
T  31652670 aaatatttgacttttttataaaataatttcttttttga-aatccttaaagagttctccggagacactcgttaacaagaccctt 31652589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 292 - 398
Target Start/End: Complemental strand, 39156333 - 39156227
Alignment:
Q  292 gtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaa 391  Q
    ||||||| |||| |||| |||| | | || |||||||||| ||||||||||| || | |||   |||||||||||||| | | ||| |||| ||||||||    
T  39156333 gtgtattgaatgcattggaaattgtagtagttgactttttaaaagaataattactaaatttttgatgcttaaagagtgtctcaggggcactcgttaacaa 39156234  T
Q  392 gaccctt 398  Q
    |||||||    
T  39156233 gaccctt 39156227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 295 - 369
Target Start/End: Complemental strand, 43512846 - 43512772
Alignment:
Q  295 tatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtg 369  Q
    ||||||||| ||| |||||  |||||||||||||||| |||||||||||  ||| | | |||| |||||||||||    
T  43512846 tatttaatgcattaaaaatgaaaatatttgacttttttaaagaataattaattaatatggaatccttaaagagtg 43512772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 322 - 371
Target Start/End: Original strand, 3755992 - 3756041
Alignment:
Q  322 ttgactttttgaaagaataattgcttattttagaatgcttaaagagtgcc 371  Q
    |||||| ||| ||||||||||| |||||||||||||| ||||||| ||||    
T  3755992 ttgactcttttaaagaataatttcttattttagaatgtttaaagaatgcc 3756041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 354 - 395
Target Start/End: Original strand, 18114530 - 18114571
Alignment:
Q  354 gaatgcttaaagagtgccccggggacacttgttaacaagacc 395  Q
    ||||||||||||||||||||| || |||| ||||||||||||    
T  18114530 gaatgcttaaagagtgccccgcgggcactcgttaacaagacc 18114571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 337 - 398
Target Start/End: Complemental strand, 27396159 - 27396098
Alignment:
Q  337 aataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccctt 398  Q
    ||||||| ||||||||||||| |||||||| || | ||| |  |||||||||||||||||||    
T  27396159 aataatttcttattttagaattcttaaagaatgtctcggtggtacttgttaacaagaccctt 27396098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 328 - 393
Target Start/End: Original strand, 35259116 - 35259181
Alignment:
Q  328 ttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaaga 393  Q
    |||| ||| ||||||| |||| ||||| || |||||||||||||||| || |||| ||||||||||    
T  35259116 tttttaaaaaataatttcttaatttagcatacttaaagagtgccccgagggcactcgttaacaaga 35259181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 366
Target Start/End: Original strand, 38570389 - 38570462
Alignment:
Q  293 tgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaaga 366  Q
    |||| |||||| ||||||||| |||||||||||||||||||   ||| ||| ||| |||| | |||||||||||    
T  38570389 tgtaattaatgcattgaaaattgaaatatttgactttttgatgaaatcatttcttcttttgggatgcttaaaga 38570462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 310 - 395
Target Start/End: Complemental strand, 44719235 - 44719150
Alignment:
Q  310 aaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagacc 395  Q
    |||||| ||||||| ||||||| | | ||||||   || |||| |||| |||||| |||| |||||||||||| ||||||||||||    
T  44719235 aaatcggaatatttaacttttttataaaataatatatttttttggaatccttaaaaagtgtcccggggacactcgttaacaagacc 44719150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 388
Target Start/End: Original strand, 5250935 - 5251031
Alignment:
Q  292 gtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaa 388  Q
    |||||||||||  |||||||||  || | ||||||||||| ||||||||| | | || ||||| ||| ||||||||||| |||| | |||| |||||    
T  5250935 gtgtatttaatacattgaaaattaaactgtttgacttttttaaagaataacttcctaatttagtatgtttaaagagtgctccggaggcactcgttaa 5251031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 319 - 363
Target Start/End: Complemental strand, 6285891 - 6285847
Alignment:
Q  319 tatttgactttttgaaagaataattgcttattttagaatgcttaa 363  Q
    ||||||||||||| ||||||||||| ||||||||| ||| |||||    
T  6285891 tatttgacttttttaaagaataatttcttattttaaaatccttaa 6285847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 306 - 394
Target Start/End: Complemental strand, 9770272 - 9770184
Alignment:
Q  306 ttgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagac 394  Q
    ||||||||  |||||||||| ||||| ||| ||||||| || ||||| ||  |||||| |||||  | ||||||||| |||||||||||    
T  9770272 ttgaaaattaaaatatttgatttttttaaaaaataatttctaattttggatagcttaacgagtgttctggggacactagttaacaagac 9770184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 291 - 366
Target Start/End: Original strand, 12590662 - 12590738
Alignment:
Q  291 cgtgtatttaatgtattgaaaatcgaaatatttgactttttgaaaga-ataattgcttattttagaatgcttaaaga 366  Q
    |||||||| |||| |||||||||| |||||||| |||||||  || | ||||||| ||| |||| ||||||||||||    
T  12590662 cgtgtattcaatgcattgaaaatcaaaatatttaactttttttaatagataattgtttaatttaaaatgcttaaaga 12590738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 293 - 397
Target Start/End: Original strand, 48022388 - 48022492
Alignment:
Q  293 tgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaag 392  Q
    |||||| |||| ||||||||| | |||| || ||||||| ||| ||||||| || | | | | ||||||||||||| || | ||| |||| |||||||||    
T  48022388 tgtattgaatgcattgaaaattgcaatagttaactttttaaaacaataattactaaatatgggatgcttaaagagtaccacaggggcactcgttaacaag 48022487  T
Q  393 accct 397  Q
    |||||    
T  48022488 accct 48022492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 4e-20; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 300 - 398
Target Start/End: Complemental strand, 1360600 - 1360503
Alignment:
Q  300 aatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccctt 398  Q
    |||| |||| ||||||||| |||| ||||||| ||| ||||||| || ||||| |||||||||||||||| |||||||||||||| |||||||||||||    
T  1360600 aatgcattggaaatcgaaacatttaacttttttaaaaaataattactaattttggaatgcttaaagagtgtcccggggacacttg-taacaagaccctt 1360503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 300 - 394
Target Start/End: Original strand, 31902791 - 31902884
Alignment:
Q  300 aatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagac 394  Q
    |||||||||||||| ||||||||||||||| | || |||||||| ||||||||  | |||||||| |||||||| |||||||| |||||||||||    
T  31902791 aatgtattgaaaattgaaatatttgactttcttaaggaataatttcttattttgaattgcttaaaaagtgcccc-gggacactcgttaacaagac 31902884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 310 - 396
Target Start/End: Original strand, 44719448 - 44719534
Alignment:
Q  310 aaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccc 396  Q
    |||||||||| ||||||||||| ||| |||||||||| ||||| ||   |||||| |||||||||||| ||||||||||||||||||    
T  44719448 aaatcgaaatgtttgacttttttaaaaaataattgctaattttggataacttaaatagtgccccgggggcacttgttaacaagaccc 44719534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 300 - 369
Target Start/End: Original strand, 33887894 - 33887963
Alignment:
Q  300 aatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtg 369  Q
    |||| ||||||||| ||||||||||||||||| |||||||||||  ||||||| ||||||||||||||||    
T  33887894 aatgcattgaaaattgaaatatttgacttttttaaagaataattatttattttggaatgcttaaagagtg 33887963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 321 - 398
Target Start/End: Original strand, 34299806 - 34299883
Alignment:
Q  321 tttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccctt 398  Q
    |||||| |||| |||||||||||||||| | ||| ||||||||| |||||||||||| |||| |||||||||||||||    
T  34299806 tttgacatttttaaagaataattgcttaatctagcatgcttaaaaagtgccccgggggcactcgttaacaagaccctt 34299883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 292 - 396
Target Start/End: Complemental strand, 27123346 - 27123242
Alignment:
Q  292 gtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaa 391  Q
    ||||| |||||| |||| |||| | |||| |||||||||| ||||||| ||| || | ||| | |||||||||||||||||||||| |||| ||||||||    
T  27123346 gtgtacttaatgcattggaaattgtaatagttgactttttaaaagaatgattactaaatttgggatgcttaaagagtgccccgggggcactcgttaacaa 27123247  T
Q  392 gaccc 396  Q
    |||||    
T  27123246 gaccc 27123242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 292 - 396
Target Start/End: Complemental strand, 28770549 - 28770445
Alignment:
Q  292 gtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaa 391  Q
    ||||||| |||| |||| |||| | |||| |||||||||  ||||||||||| || ||||| | |||||||||||||||||||| | |||| ||||||||    
T  28770549 gtgtattgaatgcattggaaattgtaatagttgacttttcaaaagaataattactaattttgggatgcttaaagagtgccccggaggcactcgttaacaa 28770450  T
Q  392 gaccc 396  Q
    |||||    
T  28770449 gaccc 28770445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 292 - 396
Target Start/End: Complemental strand, 34681764 - 34681661
Alignment:
Q  292 gtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaa 391  Q
    |||||||||||| |||| |||| ||| ||||||||||||  ||| ||||||| | || ||||||||||||||||| |||||||||| |||| ||||| ||    
T  34681764 gtgtatttaatgcattggaaattgaactatttgacttttgtaaaaaataatttcctaatttagaatgcttaaagactgccccgggg-cactcgttaagaa 34681666  T
Q  392 gaccc 396  Q
    |||||    
T  34681665 gaccc 34681661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 300 - 394
Target Start/End: Original strand, 10031963 - 10032057
Alignment:
Q  300 aatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagac 394  Q
    |||| |||| ||||||||| |||| ||||||| ||| ||||||| || ||||| |||||||||||||||| ||||||| |||| |||||| ||||    
T  10031963 aatgcattggaaatcgaaacatttaactttttaaaaaaataattactaattttggaatgcttaaagagtgtcccgggggcactcgttaacgagac 10032057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 292 - 398
Target Start/End: Complemental strand, 25886242 - 25886136
Alignment:
Q  292 gtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaa 391  Q
    ||||||| |||||||||||||| | |||| |||||||| | | ||||||||| || | |||| |||| ||||||||| ||||| ||||||| ||||||||    
T  25886242 gtgtattaaatgtattgaaaattgtaatagttgactttctaagagaataatttctaaatttaaaatgtttaaagagtaccccgaggacactagttaacaa 25886143  T
Q  392 gaccctt 398  Q
     ||||||    
T  25886142 aaccctt 25886136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 292 - 396
Target Start/End: Original strand, 3256661 - 3256766
Alignment:
Q  292 gtgtatttaatgtattgaaaatcgaaatatttgactttttg-aaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaaca 390  Q
    ||||||| | || |||| ||||||||| ||||||||||||  ||||||||||||||||||||  |||||||||||| ||| | ||||| ||| ||||| |    
T  3256661 gtgtattcagtgcattggaaatcgaaacatttgactttttttaaagaataattgcttattttgaaatgcttaaagaatgcgcaggggatactcgttaata 3256760  T
Q  391 agaccc 396  Q
    ||||||    
T  3256761 agaccc 3256766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 306 - 366
Target Start/End: Complemental strand, 39316133 - 39316073
Alignment:
Q  306 ttgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaaga 366  Q
    |||||||||||||||||||||||    ||||||||||| ||||||||||||||||||||||    
T  39316133 ttgaaaatcgaaatatttgacttcaataaagaataattacttattttagaatgcttaaaga 39316073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 310 - 398
Target Start/End: Complemental strand, 47507664 - 47507576
Alignment:
Q  310 aaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccctt 398  Q
    |||| ||||| ||||| ||||| | | ||| ||| ||| ||||||||| ||||||||||||||||| |||||| |||||||||||||||    
T  47507664 aaattgaaatctttgatttttttataaaattatttcttcttttagaatccttaaagagtgccccggagacactcgttaacaagaccctt 47507576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 300 - 398
Target Start/End: Complemental strand, 8170095 - 8169997
Alignment:
Q  300 aatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccctt 398  Q
    ||||||| | ||||| |||||||||||||||| | | ||||||| ||| |||| |||| |||||||||||  |||||   |||||||||||||||||||    
T  8170095 aatgtatcggaaatcaaaatatttgacttttttataaaataatttcttcttttggaatccttaaagagtgttccgggagtacttgttaacaagaccctt 8169997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 292 - 370
Target Start/End: Complemental strand, 40722431 - 40722353
Alignment:
Q  292 gtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgc 370  Q
    ||||| |||||| ||||||||| ||||||||||||||| | ||||||||| | ||||||| ||| |||||||| |||||    
T  40722431 gtgtaattaatgcattgaaaattgaaatatttgactttcttaaagaataaattcttatttcagattgcttaaaaagtgc 40722353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 310 - 395
Target Start/End: Original strand, 23187248 - 23187333
Alignment:
Q  310 aaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagacc 395  Q
    |||| ||||||||| | ||| | ||||| ||||||||||||||| ||||||||||||||||   ||||||||| ||||| ||||||    
T  23187248 aaattgaaatatttaattttattaaagagtaattgcttattttaaaatgcttaaagagtgcattggggacactcgttaataagacc 23187333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 289 - 369
Target Start/End: Original strand, 24450535 - 24450614
Alignment:
Q  289 tgcgtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtg 369  Q
    |||||||||| |||| |||| |||||||||||||| ||||||  ||| ||| |||  ||||||||||||||||||||||||    
T  24450535 tgcgtgtattcaatgcattggaaatcgaaatattttacttttaaaaataattatt-attattttagaatgcttaaagagtg 24450614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 350 - 398
Target Start/End: Original strand, 27766778 - 27766826
Alignment:
Q  350 tttagaatgcttaaagagtgccccggggacacttgttaacaagaccctt 398  Q
    ||||||||||||||||||||||| |||| |||| |||||||||||||||    
T  27766778 tttagaatgcttaaagagtgccctgggggcactcgttaacaagaccctt 27766826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 246 - 394
Target Start/End: Original strand, 9097683 - 9097830
Alignment:
Q  246 ggggcattagttaaagaccataagtggtaggtatttnnnnnnntgcgtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgc 345  Q
    |||||| ||||||||||| | |||||||| ||||||       || ||||||| | || |||| |||| ||||||||||| |||||  || ||||||||     
T  9097683 ggggcactagttaaagactacaagtggtaagtatttatgaaaatgtgtgtattaattgcattggaaattgaaatatttgattttttttaa-aataattgt 9097781  T
Q  346 ttattttagaatgcttaaagagtgccccggggacacttgttaacaagac 394  Q
    |||| |||| |||||||||||||| ||||  | |||| |||||||||||    
T  9097782 ttatattagtatgcttaaagagtgacccgaaggcactcgttaacaagac 9097830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 292 - 395
Target Start/End: Complemental strand, 27338334 - 27338231
Alignment:
Q  292 gtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaa 391  Q
    ||||||||||| ||||| |||| ||| | ||||| ||||| |||||||||||   || ||||| ||||||||||||||||||  | ||||| ||| ||||    
T  27338334 gtgtatttaatatattggaaattgaactgtttgatttttttaaagaataattttctaatttagcatgcttaaagagtgccccaagaacactcgttcacaa 27338235  T
Q  392 gacc 395  Q
    ||||    
T  27338234 gacc 27338231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 300 - 391
Target Start/End: Original strand, 33922782 - 33922872
Alignment:
Q  300 aatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaa 391  Q
    |||| ||||||||| ||| ||||||||||||| |||||||||||   || ||||||||||||||| | ||||||| || |||| ||||||||    
T  33922782 aatgcattgaaaattgaactatttgacttttttaaagaataattttctaatttagaatgcttaaa-aatgccccgtgggcactcgttaacaa 33922872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 292 - 382
Target Start/End: Complemental strand, 36827658 - 36827570
Alignment:
Q  292 gtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacact 382  Q
    ||||||| |||| |||| ||||| ||||||  |||||||| || ||||||||||||||||  ||| | |||||||||||||||||| ||||    
T  36827658 gtgtattcaatgaattggaaatcaaaatat--gacttttttaatgaataattgcttatttcggaaagtttaaagagtgccccgggggcact 36827570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 305 - 364
Target Start/End: Complemental strand, 42911119 - 42911060
Alignment:
Q  305 attgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaa 364  Q
    ||||||||| ||||| || |||||||| |||||||||||||||||||||| || ||||||    
T  42911119 attgaaaattgaaatgttcgacttttttaaagaataattgcttattttagtatacttaaa 42911060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 293 - 364
Target Start/End: Complemental strand, 45869103 - 45869032
Alignment:
Q  293 tgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaa 364  Q
    ||||||||||||||||||||   |||||||||||||||| ||||||||||| |||  || ||||| ||||||    
T  45869103 tgtatttaatgtattgaaaactaaaatatttgacttttttaaagaataattacttgattaagaatccttaaa 45869032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 300 - 369
Target Start/End: Original strand, 676415 - 676483
Alignment:
Q  300 aatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtg 369  Q
    |||| ||| ||||||||||||||| ||||||| | | ||||||| |||||||||||||| ||||||||||    
T  676415 aatgcatttaaaatcgaaatatttaactttttaata-aataattacttattttagaatgtttaaagagtg 676483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 351 - 396
Target Start/End: Original strand, 47754600 - 47754645
Alignment:
Q  351 ttagaatgcttaaagagtgccccggggacacttgttaacaagaccc 396  Q
    |||||||||||||||||||||| |||| ||||| ||||||||||||    
T  47754600 ttagaatgcttaaagagtgccctgggggcactttttaacaagaccc 47754645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 328 - 368
Target Start/End: Complemental strand, 6392217 - 6392177
Alignment:
Q  328 ttttgaaagaataattgcttattttagaatgcttaaagagt 368  Q
    |||||||||||||||| |||| |||||||||||||||||||    
T  6392217 ttttgaaagaataatttcttaatttagaatgcttaaagagt 6392177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 372
Target Start/End: Complemental strand, 18926399 - 18926319
Alignment:
Q  292 gtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccc 372  Q
    ||||||| |||| ||||||||| ||| ||||| || |||| ||||||||||| | |  |||| ||||||||||||||||||    
T  18926399 gtgtattcaatgcattgaaaattgaactatttcacctttttaaagaataatttcatgatttaaaatgcttaaagagtgccc 18926319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 372
Target Start/End: Complemental strand, 35567186 - 35567106
Alignment:
Q  292 gtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccc 372  Q
    ||||||||||||||||| ||||  |||||||||||||||| ||| |||||||   || |||  |||||| |||||||||||    
T  35567186 gtgtatttaatgtattggaaattaaaatatttgacttttttaaaaaataattttctaatttgaaatgctaaaagagtgccc 35567106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 328 - 395
Target Start/End: Original strand, 3267680 - 3267747
Alignment:
Q  328 ttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagacc 395  Q
    |||| ||||||||||| |||  ||||| |||||||||||||| ||||| ||||| | |||||||||||    
T  3267680 ttttaaaagaataattactttatttagcatgcttaaagagtgtcccggagacacctattaacaagacc 3267747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 293 - 352
Target Start/End: Original strand, 37129847 - 37129906
Alignment:
Q  293 tgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttatttt 352  Q
    |||| ||||||| ||| |||| ||||||||| ||||||| ||||||||||| ||||||||    
T  37129847 tgtaattaatgtcttgtaaattgaaatatttaacttttttaaagaataatttcttatttt 37129906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 292 - 371
Target Start/End: Original strand, 39321016 - 39321095
Alignment:
Q  292 gtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgcc 371  Q
    ||||||| |||  ||||||||| | |||| |||||||||| |||||||||||| | | ||| | ||||||||||||||||    
T  39321016 gtgtattgaatacattgaaaattgtaatagttgactttttaaaagaataattgttaaatttggtatgcttaaagagtgcc 39321095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 322 - 377
Target Start/End: Original strand, 43224151 - 43224206
Alignment:
Q  322 ttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccgggg 377  Q
    |||||||||| ||||||||||  || ||||||| ||||||||||||||||| ||||    
T  43224151 ttgactttttaaaagaataatatctaattttaggatgcttaaagagtgcccggggg 43224206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 395
Target Start/End: Complemental strand, 5907851 - 5907794
Alignment:
Q  337 aataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagacc 395  Q
    ||||||| |||| |||||||||||||||||||||||  ||| |||| ||||||||||||    
T  5907851 aataattacttaatttagaatgcttaaagagtgccctaggg-cactcgttaacaagacc 5907794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 292 - 398
Target Start/End: Original strand, 22688985 - 22689089
Alignment:
Q  292 gtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaa 391  Q
    |||||||||||| ||| ||||| ||| |  |||||||||| ||||||||| | |||| ||||||||| ||||| |||||| ||||| |||  ||||||||    
T  22688985 gtgtatttaatgcattaaaaattgaattgattgacttttttaaagaataaattcttaatttagaatgtttaaa-agtgccacgggg-cacacgttaacaa 22689082  T
Q  392 gaccctt 398  Q
     ||||||    
T  22689083 aaccctt 22689089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 369
Target Start/End: Original strand, 28733827 - 28733869
Alignment:
Q  327 tttttgaaagaataattgcttattttagaatgcttaaagagtg 369  Q
    ||||| |||||||||||| |||||||| |||||||||||||||    
T  28733827 ttttttaaagaataattgtttattttaaaatgcttaaagagtg 28733869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 300 - 398
Target Start/End: Original strand, 35496615 - 35496713
Alignment:
Q  300 aatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccctt 398  Q
    |||| ||||||||| | |||| |||||||||| |||  ||| || || | ||| | ||||||||||||||| ||||||||| | || ||||||||||||    
T  35496615 aatgcattgaaaattgtaatagttgactttttaaaaatatagttactaaattttggatgcttaaagagtgctccggggacattcgtaaacaagaccctt 35496713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 293 - 395
Target Start/End: Original strand, 35599837 - 35599939
Alignment:
Q  293 tgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaag 392  Q
    |||||| |||| ||||||| | ||| ||||||| ||||| ||||||||||| | || ||||| ||| |||||||||  | ||| | |||| |||||||||    
T  35599837 tgtattcaatgcattgaaatttgaactatttgaattttttaaagaataatttcctaatttagtatgtttaaagagtatctcggaggcactcgttaacaag 35599936  T
Q  393 acc 395  Q
    |||    
T  35599937 acc 35599939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 295 - 396
Target Start/End: Complemental strand, 36973406 - 36973304
Alignment:
Q  295 tatttaatgtattgaaaatcgaaatatttgactttttg-aaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaaga 393  Q
    |||||| || |||| |||| ||| ||||||| |||||  ||||||||| | | || ||| ||||||||||||||||| |||| | |||| ||||||||||    
T  36973406 tatttattgcattggaaattgaattatttgattttttttaaagaataacttcctaatttggaatgcttaaagagtgcaccggaggcactcgttaacaaga 36973307  T
Q  394 ccc 396  Q
    |||    
T  36973306 ccc 36973304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 292 - 366
Target Start/End: Original strand, 37352445 - 37352519
Alignment:
Q  292 gtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaaga 366  Q
    ||||| |||||| |||| |||| ||||||||||||||||| |  |||||||| ||| |||| |||| ||||||||    
T  37352445 gtgtaattaatgcattggaaattgaaatatttgactttttaatggaataatttcttgtttttgaatccttaaaga 37352519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 396
Target Start/End: Original strand, 17157811 - 17157908
Alignment:
Q  300 aatgtattgaaaatcgaaatatttgactttttgaaag-aataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccc 396  Q
    |||| |||| |||| |||| ||||||||||||  | | ||||||| ||  |||| ||||||||||||||||||||  || |||| |||||||||||||    
T  17157811 aatgcattggaaattgaaacatttgactttttttatggaataatttctccttttggaatgcttaaagagtgccccaagggcactcgttaacaagaccc 17157908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 370
Target Start/End: Original strand, 43492277 - 43492314
Alignment:
Q  333 aaagaataattgcttattttagaatgcttaaagagtgc 370  Q
    ||||||||||| |||| |||||||||||||||||||||    
T  43492277 aaagaataattacttaatttagaatgcttaaagagtgc 43492314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 354 - 398
Target Start/End: Complemental strand, 17302901 - 17302857
Alignment:
Q  354 gaatgcttaaagagtgccccggggacacttgttaacaagaccctt 398  Q
    ||||||||||||||||  |||||| |||| |||||||||||||||    
T  17302901 gaatgcttaaagagtgtaccgggggcactcgttaacaagaccctt 17302857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 300 - 372
Target Start/End: Original strand, 26402824 - 26402896
Alignment:
Q  300 aatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccc 372  Q
    |||||||||||||| ||| | ||||||||||| || |||||||| |||  ||  |||| ||||||||||||||    
T  26402824 aatgtattgaaaattgaagtttttgacttttttaaggaataatttctttattaggaatccttaaagagtgccc 26402896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 336 - 396
Target Start/End: Complemental strand, 32829154 - 32829094
Alignment:
Q  336 gaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccc 396  Q
    |||||||| ||  |||| ||||||||||||| |||||| || ||||| |||||||||||||    
T  32829154 gaataatttctccttttggaatgcttaaagaatgccccaggaacactcgttaacaagaccc 32829094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 305 - 397
Target Start/End: Original strand, 36015052 - 36015144
Alignment:
Q  305 attgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagaccct 397  Q
    ||||||||| || |||||||| ||||| | | ||||||| ||| ||||  ||| |||||||| || ||||| |||| | ||||||||||||||    
T  36015052 attgaaaattgacatatttgatttttttataaaataatttctttttttgaaatccttaaagaatgtcccggagacattcgttaacaagaccct 36015144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 292 - 369
Target Start/End: Complemental strand, 189141 - 189064
Alignment:
Q  292 gtgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtg 369  Q
    ||||| ||||||||||  |||| ||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||    
T  189141 gtgtaattaatgtattagaaatagaaatatttaacttttttaaagaataattgcttattttaaaatgcttaaagagtg 189064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 302 - 393
Target Start/End: Original strand, 138072 - 138163
Alignment:
Q  302 tgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaaga 393  Q
    |||||||||||| ||||||||||| |||||  || |||||||||||||||  |||| |||||| ||||| ||||  ||||||||||||||||    
T  138072 tgtattgaaaattgaaatatttgatttttttgaataataattgcttatttaggaatacttaaaaagtgctccggaaacacttgttaacaaga 138163  T

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Target: scaffold0036 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 293 - 396
Target Start/End: Original strand, 62560 - 62663
Alignment:
Q  293 tgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaag 392  Q
    |||||| |||| ||||||||||| |||| |||||||||| ||||||||||| || | | |   ||||||||||||| ||| || |||||| |||||||||    
T  62560 tgtattgaatgcattgaaaatcgtaatagttgactttttaaaagaataattactaaatatgagatgcttaaagagtaccctggagacactcgttaacaag 62659  T
Q  393 accc 396  Q
    ||||    
T  62660 accc 62663  T

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Target: scaffold0011 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 293 - 366
Target Start/End: Complemental strand, 219261 - 219188
Alignment:
Q  293 tgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaaga 366  Q
    ||||||||||| |||| |||| ||| ||||||||||||  ||||||||||| | || |||| ||||||||||||    
T  219261 tgtatttaatgcattggaaattgaactatttgacttttgtaaagaataatttcctaatttaaaatgcttaaaga 219188  T

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Target: scaffold0010 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 393
Target Start/End: Complemental strand, 26760 - 26673
Alignment:
Q  305 attgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaaga 393  Q
    ||||||||| ||||  |||||| |||| ||| ||||||| |||| ||||| |||||||||||||| ||||||  |||||||||| ||||    
T  26760 attgaaaattgaaaactttgacattttaaaataataattacttaatttagcatgcttaaagagtg-cccgggagcacttgttaataaga 26673  T

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Target: scaffold0291 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 310 - 369
Target Start/End: Original strand, 11716 - 11775
Alignment:
Q  310 aaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtg 369  Q
    ||||||||| |||||||||||  ||| | ||||||||||||||  |||||||||||||||    
T  11716 aaatcgaaacatttgacttttctaaaaattaattgcttattttgaaatgcttaaagagtg 11775  T

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Target: scaffold0113 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 304 - 394
Target Start/End: Complemental strand, 13997 - 13910
Alignment:
Q  304 tattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaagac 394  Q
    |||||||||| ||||||||| |||||   || |||||||| ||||||||||| |||||||||||||   ||||| |||| |||||||||||    
T  13997 tattgaaaattgaaatatttaacttta--aatgaataattacttattttagattgcttaaagagtg-ttcgggggcactcgttaacaagac 13910  T

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Target: scaffold1681 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1681
Description:

Target: scaffold1681; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 369
Target Start/End: Complemental strand, 725 - 672
Alignment:
Q  316 aaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtg 369  Q
    |||||||| || |||| ||| | ||||| |||||||||||||||||||||||||    
T  725 aaatatttaacctttttaaacactaattacttattttagaatgcttaaagagtg 672  T

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Target: scaffold0192 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 369
Target Start/End: Original strand, 15937 - 16006
Alignment:
Q  300 aatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtg 369  Q
    ||||| |||||||||||||||||| || ||||  ||||||||||  | |||||| |||| ||||||||||    
T  15937 aatgttttgaaaatcgaaatatttaacatttttcaagaataattattaattttaaaatgtttaaagagtg 16006  T

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Target: scaffold0121 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 398
Target Start/End: Original strand, 28810 - 28915
Alignment:
Q  293 tgtatttaatgtattgaaaatcgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaacaag 392  Q
    |||||| |||| |||||||||  |||||||| | ||||| |  |||||||| ||| ||||| |||| ||||||||| | |  || ||||| |||||||||    
T  28810 tgtattcaatgcattgaaaattaaaatatttaatttttttatggaataatttcttcttttaaaatgtttaaagagtactctaggaacactcgttaacaag 28909  T
Q  393 accctt 398  Q
    ||||||    
T  28910 accctt 28915  T

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Target: scaffold0419 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 333 - 389
Target Start/End: Complemental strand, 1096 - 1040
Alignment:
Q  333 aaagaataattgcttattttagaatgcttaaagagtgccccggggacacttgttaac 389  Q
    ||||||||||| || ||||||  ||||||||||||||| || || ||||||||||||    
T  1096 aaagaataattactaattttatgatgcttaaagagtgcaccaggaacacttgttaac 1040  T

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