View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2363_high_8 (Length: 347)
Name: NF2363_high_8
Description: NF2363
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2363_high_8 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 316; Significance: 1e-178; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 13 - 332
Target Start/End: Original strand, 42150862 - 42151181
Alignment:
| Q |
13 |
aatatgaaatgattgtattttctcgtcaagtggcataaattggtcaacatataaaaataatgtctgtccatacagaacaacttgatgtagaagatatgaa |
112 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
42150862 |
aatatgaaatgattgtattttctcgtcaagtggcataaattggtcaacatataaaaataatgtctgtccatacagaaaaacttgatgtagaagatatgaa |
42150961 |
T |
|
| Q |
113 |
tttagtcttgctctcaatcatctcaaatcacttcctttcattctatgataattgaactatagtattctgtaaactatcatcaacgctacgcaaactatat |
212 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42150962 |
tttagtcttgctctcaatcatctcaaatcacttcctttcattctatgataattgaactatagtattctgtaaactatcatcaacgctacgcaaactatat |
42151061 |
T |
|
| Q |
213 |
aaatggaagtccaaaatatcacgaagggaattcactattatcctattgcattaaggatataaagaaactgacataggcaaagcaaactaacttaatatgg |
312 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42151062 |
aaatggaagtccaaaatatcacgaagggaattcactattatcctattgcattaaggatataaagaaactgacataggcaaagcaaactaacttaatatgg |
42151161 |
T |
|
| Q |
313 |
acacaagctttggagtcttt |
332 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
42151162 |
acacaagctttggagtcttt |
42151181 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 114 - 159
Target Start/End: Original strand, 42138980 - 42139025
Alignment:
| Q |
114 |
ttagtcttgctctcaatcatctcaaatcacttcctttcattctatg |
159 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||| ||||||| |
|
|
| T |
42138980 |
ttagtcttgctcttaatcatctcaaatcacttcctttctttctatg |
42139025 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University