View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2363_low_16 (Length: 280)

Name: NF2363_low_16
Description: NF2363
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2363_low_16
NF2363_low_16
[»] chr5 (36 HSPs)
chr5 (15-265)||(11250984-11251234)
chr5 (19-130)||(978082-978193)
chr5 (19-130)||(40156203-40156314)
chr5 (19-125)||(3472423-3472529)
chr5 (19-128)||(33587615-33587724)
chr5 (19-131)||(14634303-14634415)
chr5 (19-130)||(8086176-8086287)
chr5 (19-130)||(9502773-9502884)
chr5 (19-120)||(33387235-33387336)
chr5 (22-125)||(34111972-34112075)
chr5 (19-124)||(11785871-11785977)
chr5 (19-125)||(30355020-30355126)
chr5 (19-130)||(18094227-18094338)
chr5 (19-130)||(24992284-24992395)
chr5 (16-130)||(38916393-38916507)
chr5 (19-104)||(7224196-7224281)
chr5 (19-104)||(39776661-39776746)
chr5 (19-97)||(32017251-32017329)
chr5 (19-104)||(12456786-12456871)
chr5 (19-125)||(24916392-24916500)
chr5 (19-124)||(27109700-27109804)
chr5 (23-129)||(20692541-20692645)
chr5 (19-73)||(11761128-11761182)
chr5 (19-62)||(9050722-9050765)
chr5 (19-83)||(12447564-12447626)
chr5 (19-63)||(32400399-32400443)
chr5 (19-130)||(12007778-12007889)
chr5 (22-81)||(27579579-27579638)
chr5 (19-92)||(3422356-3422432)
chr5 (19-69)||(18998753-18998803)
chr5 (25-104)||(6996012-6996090)
chr5 (76-130)||(12448275-12448329)
chr5 (59-128)||(18598551-18598620)
chr5 (33-78)||(37495667-37495712)
chr5 (19-91)||(26387025-26387097)
chr5 (19-99)||(38698109-38698189)
[»] chr8 (36 HSPs)
chr8 (19-138)||(14237277-14237396)
chr8 (19-130)||(32998455-32998566)
chr8 (19-125)||(18044435-18044541)
chr8 (19-130)||(42587394-42587505)
chr8 (19-140)||(38957165-38957286)
chr8 (19-124)||(41263821-41263926)
chr8 (19-130)||(616788-616899)
chr8 (19-130)||(623181-623292)
chr8 (19-136)||(3100641-3100758)
chr8 (19-124)||(13216867-13216972)
chr8 (19-130)||(132022-132133)
chr8 (19-130)||(8394351-8394462)
chr8 (22-104)||(5878347-5878429)
chr8 (19-125)||(40494394-40494500)
chr8 (19-128)||(11637789-11637898)
chr8 (19-130)||(4270238-4270349)
chr8 (19-125)||(2766194-2766300)
chr8 (19-125)||(35403526-35403632)
chr8 (32-113)||(22489433-22489514)
chr8 (19-130)||(36642004-36642116)
chr8 (33-125)||(24524110-24524202)
chr8 (29-130)||(36167081-36167182)
chr8 (18-104)||(5173282-5173368)
chr8 (22-104)||(3370405-3370487)
chr8 (19-125)||(6414111-6414217)
chr8 (19-99)||(33700219-33700299)
chr8 (19-113)||(18090351-18090444)
chr8 (19-130)||(38497088-38497188)
chr8 (75-125)||(13217223-13217273)
chr8 (19-65)||(40716669-40716715)
chr8 (19-72)||(18035163-18035216)
chr8 (22-73)||(18020928-18020982)
chr8 (20-79)||(8058971-8059030)
chr8 (19-125)||(9632165-9632271)
chr8 (19-89)||(13138177-13138247)
chr8 (16-73)||(10982633-10982690)
[»] chr6 (39 HSPs)
chr6 (19-128)||(17257797-17257906)
chr6 (19-130)||(18668834-18668945)
chr6 (19-130)||(4147936-4148047)
chr6 (19-125)||(22054782-22054888)
chr6 (19-130)||(19088104-19088215)
chr6 (19-130)||(24624087-24624198)
chr6 (19-130)||(32414825-32414936)
chr6 (19-130)||(32671821-32671932)
chr6 (19-124)||(17213930-17214035)
chr6 (19-130)||(6563231-6563342)
chr6 (23-126)||(20226448-20226551)
chr6 (23-126)||(22120432-22120535)
chr6 (19-110)||(24955542-24955633)
chr6 (19-121)||(3989410-3989511)
chr6 (19-125)||(15383076-15383182)
chr6 (19-104)||(1040855-1040940)
chr6 (19-119)||(20437159-20437260)
chr6 (19-135)||(28477753-28477869)
chr6 (22-125)||(31569175-31569278)
chr6 (19-128)||(29790213-29790322)
chr6 (19-139)||(25475959-25476074)
chr6 (19-135)||(29693883-29693999)
chr6 (19-128)||(15337495-15337604)
chr6 (15-124)||(21540771-21540880)
chr6 (22-124)||(12225986-12226088)
chr6 (22-104)||(19240741-19240823)
chr6 (19-98)||(10298719-10298798)
chr6 (19-125)||(4440860-4440966)
chr6 (19-125)||(10520478-10520584)
chr6 (19-125)||(31869718-31869824)
chr6 (15-71)||(8101664-8101720)
chr6 (19-79)||(23158055-23158115)
chr6 (22-77)||(5495307-5495362)
chr6 (19-73)||(3623856-3623909)
chr6 (22-73)||(1260492-1260543)
chr6 (19-98)||(17155186-17155265)
chr6 (19-98)||(19788614-19788693)
chr6 (25-98)||(14214065-14214138)
chr6 (22-98)||(19762307-19762383)
[»] chr7 (55 HSPs)
chr7 (19-131)||(7438907-7439019)
chr7 (19-130)||(16778510-16778621)
chr7 (13-125)||(7457862-7457973)
chr7 (19-139)||(47156023-47156143)
chr7 (19-130)||(20885108-20885219)
chr7 (19-130)||(28061661-28061772)
chr7 (19-130)||(32431504-32431615)
chr7 (19-130)||(36623313-36623424)
chr7 (19-125)||(40256067-40256173)
chr7 (12-130)||(41897993-41898111)
chr7 (19-125)||(42890489-42890595)
chr7 (19-132)||(36585112-36585225)
chr7 (19-130)||(40090064-40090175)
chr7 (19-125)||(6174846-6174952)
chr7 (19-125)||(39130072-39130178)
chr7 (22-130)||(38851996-38852104)
chr7 (19-125)||(46479839-46479945)
chr7 (19-104)||(44732043-44732128)
chr7 (19-130)||(48602441-48602552)
chr7 (20-126)||(11502727-11502833)
chr7 (19-125)||(25566694-25566799)
chr7 (19-130)||(6766696-6766807)
chr7 (19-130)||(42877391-42877502)
chr7 (19-104)||(35117157-35117241)
chr7 (19-124)||(41088598-41088703)
chr7 (35-124)||(46322127-46322216)
chr7 (20-104)||(30342105-30342189)
chr7 (30-125)||(8683828-8683923)
chr7 (22-122)||(3851090-3851187)
chr7 (19-129)||(5788523-5788633)
chr7 (19-130)||(2198607-2198718)
chr7 (19-125)||(4131649-4131755)
chr7 (15-125)||(5529021-5529131)
chr7 (19-85)||(46103516-46103582)
chr7 (17-98)||(26161633-26161714)
chr7 (19-125)||(35570195-35570306)
chr7 (19-125)||(7169136-7169242)
chr7 (19-125)||(36341630-36341736)
chr7 (19-125)||(41134634-41134735)
chr7 (19-125)||(27045554-27045660)
chr7 (15-132)||(16870622-16870739)
chr7 (19-63)||(21379816-21379860)
chr7 (19-87)||(34750550-34750618)
chr7 (15-62)||(23707565-23707612)
chr7 (19-104)||(49101959-49102044)
chr7 (19-79)||(38767205-38767265)
chr7 (37-125)||(42662197-42662284)
chr7 (22-69)||(37467456-37467503)
chr7 (20-98)||(30462171-30462249)
chr7 (32-73)||(3785582-3785623)
chr7 (55-104)||(45331943-45331992)
chr7 (37-98)||(49110634-49110695)
chr7 (19-99)||(36515875-36515955)
chr7 (19-99)||(40348553-40348633)
chr7 (15-43)||(46321294-46321322)
[»] chr3 (43 HSPs)
chr3 (19-138)||(33803518-33803638)
chr3 (19-125)||(21797566-21797672)
chr3 (19-130)||(13499481-13499592)
chr3 (19-130)||(42490342-42490453)
chr3 (19-130)||(27010620-27010731)
chr3 (19-130)||(34912288-34912399)
chr3 (19-130)||(39866287-39866398)
chr3 (19-130)||(42761629-42761740)
chr3 (19-125)||(6910344-6910450)
chr3 (19-125)||(27334877-27334983)
chr3 (19-137)||(54507639-54507757)
chr3 (19-104)||(38137855-38137940)
chr3 (19-130)||(20765201-20765312)
chr3 (19-130)||(33415804-33415915)
chr3 (19-94)||(30213845-30213920)
chr3 (19-104)||(36227576-36227661)
chr3 (42-130)||(19823905-19823993)
chr3 (19-130)||(21005298-21005409)
chr3 (19-125)||(43467888-43467994)
chr3 (19-125)||(43181501-43181608)
chr3 (19-128)||(41252909-41253018)
chr3 (19-128)||(15332952-15333061)
chr3 (19-103)||(44561816-44561900)
chr3 (48-125)||(45613583-45613660)
chr3 (19-125)||(25527416-25527520)
chr3 (19-104)||(3430420-3430505)
chr3 (30-96)||(27813445-27813511)
chr3 (19-104)||(52167240-52167325)
chr3 (19-135)||(22786630-22786744)
chr3 (68-125)||(32220873-32220930)
chr3 (24-79)||(3017847-3017902)
chr3 (20-79)||(16434802-16434861)
chr3 (22-128)||(15568084-15568189)
chr3 (19-73)||(41751556-41751610)
chr3 (19-69)||(48334667-48334716)
chr3 (38-79)||(14412260-14412301)
chr3 (22-71)||(17643795-17643844)
chr3 (19-135)||(22782266-22782380)
chr3 (19-72)||(23940508-23940561)
chr3 (22-79)||(33128068-33128125)
chr3 (19-76)||(48143909-48143966)
chr3 (19-99)||(19327476-19327556)
chr3 (18-98)||(22755536-22755616)
[»] chr2 (38 HSPs)
chr2 (19-130)||(39358151-39358262)
chr2 (19-130)||(2183103-2183214)
chr2 (19-130)||(5405001-5405112)
chr2 (19-130)||(8042168-8042279)
chr2 (19-130)||(19141212-19141323)
chr2 (19-125)||(7608059-7608165)
chr2 (19-125)||(44365167-44365273)
chr2 (21-125)||(6223076-6223180)
chr2 (19-121)||(11841739-11841841)
chr2 (15-124)||(36072185-36072294)
chr2 (22-132)||(19262683-19262793)
chr2 (19-125)||(7799857-7799963)
chr2 (22-90)||(13125294-13125362)
chr2 (35-124)||(33607387-33607476)
chr2 (19-85)||(9172292-9172358)
chr2 (19-125)||(11931701-11931807)
chr2 (19-125)||(32774601-32774707)
chr2 (22-124)||(43444689-43444791)
chr2 (19-100)||(44644905-44644986)
chr2 (19-103)||(22839073-22839157)
chr2 (25-125)||(24251970-24252070)
chr2 (19-104)||(36177723-36177809)
chr2 (23-96)||(31610803-31610876)
chr2 (28-124)||(9006939-9007035)
chr2 (19-119)||(36719470-36719565)
chr2 (19-72)||(38839136-38839189)
chr2 (19-124)||(42133763-42133868)
chr2 (19-79)||(38292008-38292068)
chr2 (19-125)||(19165929-19166034)
chr2 (19-79)||(13117470-13117530)
chr2 (20-92)||(31904027-31904099)
chr2 (20-79)||(2831762-2831821)
chr2 (53-104)||(13598472-13598523)
chr2 (19-81)||(16865108-16865170)
chr2 (19-89)||(30708874-30708944)
chr2 (20-98)||(40471772-40471850)
chr2 (16-89)||(32886952-32887025)
chr2 (25-77)||(3837271-3837323)
[»] chr1 (38 HSPs)
chr1 (19-130)||(6402556-6402667)
chr1 (19-130)||(16120586-16120697)
chr1 (19-125)||(30003543-30003649)
chr1 (19-124)||(11641213-11641318)
chr1 (19-124)||(36757632-36757737)
chr1 (19-124)||(42788688-42788793)
chr1 (19-130)||(6766377-6766488)
chr1 (15-130)||(27292645-27292760)
chr1 (19-130)||(30701723-30701834)
chr1 (19-130)||(40771918-40772029)
chr1 (19-125)||(9342791-9342897)
chr1 (19-125)||(36399108-36399214)
chr1 (19-130)||(40977634-40977745)
chr1 (19-130)||(17305959-17306070)
chr1 (22-130)||(24321264-24321374)
chr1 (21-120)||(26910091-26910190)
chr1 (19-130)||(52024031-52024142)
chr1 (21-125)||(42735313-42735420)
chr1 (23-119)||(48375018-48375114)
chr1 (19-131)||(15912482-15912594)
chr1 (19-104)||(4302149-4302234)
chr1 (22-125)||(28030830-28030933)
chr1 (15-90)||(42367438-42367513)
chr1 (19-104)||(44647859-44647944)
chr1 (19-98)||(30385291-30385370)
chr1 (19-125)||(15382572-15382678)
chr1 (19-124)||(40800533-40800638)
chr1 (19-124)||(38153423-38153528)
chr1 (19-126)||(3485353-3485460)
chr1 (19-67)||(22575733-22575781)
chr1 (23-103)||(34634939-34635019)
chr1 (28-104)||(44644510-44644586)
chr1 (19-94)||(27984597-27984671)
chr1 (19-72)||(31444986-31445039)
chr1 (19-89)||(9881322-9881392)
chr1 (39-97)||(16689862-16689920)
chr1 (57-125)||(25170889-25170955)
chr1 (21-130)||(19711840-19711945)
[»] chr4 (55 HSPs)
chr4 (19-125)||(25296726-25296832)
chr4 (19-125)||(44232223-44232329)
chr4 (19-130)||(2760873-2760984)
chr4 (19-130)||(26169991-26170102)
chr4 (19-130)||(38416796-38416907)
chr4 (19-130)||(47386432-47386543)
chr4 (19-128)||(12240324-12240433)
chr4 (19-130)||(17610285-17610396)
chr4 (19-130)||(35686378-35686489)
chr4 (19-130)||(38716892-38717002)
chr4 (10-130)||(35381031-35381151)
chr4 (19-130)||(29830348-29830459)
chr4 (19-130)||(54330836-54330947)
chr4 (19-130)||(55209720-55209831)
chr4 (19-125)||(43967733-43967839)
chr4 (19-130)||(26125713-26125824)
chr4 (19-125)||(12625261-12625367)
chr4 (19-130)||(19433504-19433619)
chr4 (19-125)||(25918213-25918319)
chr4 (28-138)||(55800831-55800941)
chr4 (22-130)||(31010219-31010327)
chr4 (19-125)||(50620828-50620934)
chr4 (19-120)||(17446779-17446880)
chr4 (19-104)||(45291863-45291948)
chr4 (15-130)||(3036985-3037100)
chr4 (19-125)||(54610872-54610979)
chr4 (19-130)||(55191829-55191940)
chr4 (19-125)||(50205753-50205859)
chr4 (19-125)||(36523114-36523220)
chr4 (19-98)||(4467665-4467744)
chr4 (19-86)||(7614664-7614731)
chr4 (25-104)||(19595736-19595815)
chr4 (22-124)||(2571031-2571133)
chr4 (22-104)||(9029598-9029680)
chr4 (19-104)||(38721368-38721453)
chr4 (27-104)||(27407773-27407850)
chr4 (19-79)||(14144603-14144663)
chr4 (52-125)||(5428588-5428661)
chr4 (19-104)||(32871505-32871590)
chr4 (22-67)||(50181128-50181173)
chr4 (19-104)||(56297848-56297933)
chr4 (22-97)||(19903799-19903874)
chr4 (34-125)||(34652208-34652299)
chr4 (19-130)||(10550429-10550542)
chr4 (19-124)||(23360189-23360291)
chr4 (29-135)||(25101720-25101826)
chr4 (24-89)||(29051730-29051793)
chr4 (19-125)||(39307706-39307812)
chr4 (25-79)||(53304481-53304535)
chr4 (19-128)||(20875393-20875502)
chr4 (19-120)||(34316536-34316636)
chr4 (20-79)||(55631824-55631883)
chr4 (35-99)||(10181149-10181213)
chr4 (14-46)||(34652157-34652189)
chr4 (19-67)||(55091333-55091381)
[»] scaffold0022 (1 HSPs)
scaffold0022 (19-130)||(100793-100904)
[»] scaffold0003 (1 HSPs)
scaffold0003 (19-130)||(161983-162094)
[»] scaffold0056 (1 HSPs)
scaffold0056 (19-124)||(70972-71076)
[»] scaffold0295 (2 HSPs)
scaffold0295 (19-130)||(13863-13974)
scaffold0295 (75-130)||(9377-9432)
[»] scaffold0018 (1 HSPs)
scaffold0018 (19-125)||(67915-68021)
[»] scaffold0099 (1 HSPs)
scaffold0099 (19-104)||(28798-28884)
[»] scaffold0262 (1 HSPs)
scaffold0262 (19-104)||(22811-22896)
[»] scaffold0225 (1 HSPs)
scaffold0225 (19-104)||(8979-9064)
[»] scaffold0029 (1 HSPs)
scaffold0029 (19-104)||(138176-138261)
[»] scaffold0595 (1 HSPs)
scaffold0595 (22-93)||(3990-4061)
[»] scaffold0608 (1 HSPs)
scaffold0608 (22-67)||(1588-1633)
[»] scaffold0009 (2 HSPs)
scaffold0009 (19-125)||(217021-217128)
scaffold0009 (19-73)||(53566-53620)
[»] scaffold0024 (1 HSPs)
scaffold0024 (19-99)||(36463-36543)


Alignment Details
Target: chr5 (Bit Score: 231; Significance: 1e-127; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 15 - 265
Target Start/End: Complemental strand, 11251234 - 11250984
Alignment:
Q  15 aaataacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacata 114  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11251234 aaataacatcgtacatgctaatatttgtatttatacattagttaaaaagtatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacata 11251135  T
Q  115 tattttgaaacagaggaaataataacaatatttgatgtagatatttgatttgtcggctcaaaatcttatgcttatagttagatgaaaacaaaaattatga 214  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  11251134 tattttgaaccagaggaaataataacaatatttgatgtagatatttgatttgtcggctcaaaatcttatgctcatagttagatgaaaacaaaaattatga 11251035  T
Q  215 cattgtgcttgtttttccttattttgcatccattctatccctccaaatact 265  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11251034 cattgtgcttgtttttccttattttgcatccattctatccctccaaatact 11250984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 978193 - 978082
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| || |||||||||||| |||||||||| |||||||||||||||||||||||||||||| || ||||| ||||    
T  978193 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtatt 978094  T
Q  119 ttgaaacagagg 130  Q
    ||||||| ||||    
T  978093 ttgaaacggagg 978082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 40156314 - 40156203
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| ||||||| ||||||| |||||| ||| ||||||||||||||||||||||||||||||||| || || ||||    
T  40156314 aacatcttacatgctaatatttgtatttatacattaattaaaaattatggtaaaagtaagtcaagtgaatagtgcacattgcaaaagttggatatgtatt 40156215  T
Q  119 ttgaaacagagg 130  Q
    ||||||| ||||    
T  40156214 ttgaaacggagg 40156203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 3472423 - 3472529
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||||||| ||||||||||||||||||| ||  |||| ||||    
T  3472423 aacatcttacatgctaatatttgtatttattcattagttaaaaaatatggtcaaagtaagtcaagtaaatagtgcacattgcaaaaattgaacatgtatt 3472522  T
Q  119 ttgaaac 125  Q
    |||||||    
T  3472523 ttgaaac 3472529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 19 - 128
Target Start/End: Original strand, 33587615 - 33587724
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    ||||||||||||| |||||||||||||| || ||||||||||||||||||||||| |||||||| |||||| |||||||||||||| || ||||| ||||    
T  33587615 aacatcttacatgttaatatttgtatttatagattagttaaaaaatatggtcaaagtaagtcaaatgaataatgcacattgcaaaaattggacatgtatt 33587714  T
Q  119 ttgaaacaga 128  Q
    ||||||||||    
T  33587715 ttgaaacaga 33587724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 14634303 - 14634415
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| || |||||||||||| ||| |||||| |||||||||||| ||||||||||||||||| || ||||| ||||    
T  14634303 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatagtcaaagtaagtcaagtgactagtgcacattgcaaaaattggacatgtatt 14634402  T
Q  119 ttgaaacagagga 131  Q
    ||||||| |||||    
T  14634403 ttgaaacggagga 14634415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 8086176 - 8086287
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    ||||||||||||| |||||||||||||| || |||||||||||| ||| |||||| |||||||||||||||||||||||||||||| || ||||| ||||    
T  8086176 aacatcttacatgttaatatttgtatttatatattagttaaaaagtatagtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtatt 8086275  T
Q  119 ttgaaacagagg 130  Q
    ||||||| ||||    
T  8086276 ttgaaacggagg 8086287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 9502773 - 9502884
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| || |||||||||||| |||||||||| |||||||| ||||||||||||||||||||| ||| |||| ||||    
T  9502773 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacattgcaaaaattaaacatgtatt 9502872  T
Q  119 ttgaaacagagg 130  Q
    || |||| ||||    
T  9502873 ttaaaacggagg 9502884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 19 - 120
Target Start/End: Complemental strand, 33387336 - 33387235
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| || |||||||||||| ||| |||||| |||||||||||||||||||||||||||||| || ||||| ||||    
T  33387336 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatagtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtatt 33387237  T
Q  119 tt 120  Q
    ||    
T  33387236 tt 33387235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 22 - 125
Target Start/End: Complemental strand, 34112075 - 34111972
Alignment:
Q  22 atcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttg 121  Q
    |||||||||| |||||||||||||| || |||||| ||||||||| |||||| ||||||||||||||||||||||||||||||  ||||||| |||||||    
T  34112075 atcttacatgataatatttgtatttatagattagtaaaaaaatatagtcaaagtaagtcaagtgaatagtgcacattgcaaaaactagacatgtattttg 34111976  T
Q  122 aaac 125  Q
    ||||    
T  34111975 aaac 34111972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 124
Target Start/End: Original strand, 11785871 - 11785977
Alignment:
Q  19 aacatcttacatgctaatattt-gtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatat 117  Q
    ||||||||||||| |||||||| |||||| ||||||||||||||| |||| ||||| ||||||||||||||||| |||||||||||| ||| |||| |||    
T  11785871 aacatcttacatggtaatattttgtatttatacattagttaaaaagtatgatcaaagtaagtcaagtgaatagtacacattgcaaaaattaaacatgtat 11785970  T
Q  118 tttgaaa 124  Q
    |||||||    
T  11785971 tttgaaa 11785977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 30355020 - 30355126
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| || |||||||||||  |||||| ||| ||| |||||||||||||||| ||||||||| || ||||| ||||    
T  30355020 aacatcttacatgctaatatttgtatttatatattagttaaaatgtatggttaaagtaaatcaagtgaatagtgcatattgcaaaaattggacatgtatt 30355119  T
Q  119 ttgaaac 125  Q
    |||||||    
T  30355120 ttgaaac 30355126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 18094227 - 18094338
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||  | ||| ||||| ||||||||| |||||||||||||| ||  |||| ||||    
T  18094227 aacatcttacatgctaatatttgtatttatacattagttaaaaagtataattaaagtaagttaagtgaataatgcacattgcaaaaattgaacatgtatt 18094326  T
Q  119 ttgaaacagagg 130  Q
    ||||||| ||||    
T  18094327 ttgaaacggagg 18094338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 24992284 - 24992395
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    ||||||||| |||||||||||||||||| || ||||||||||||||||||||||| ||||  | ||||||||||||||||| |||| |  ||||| ||||    
T  24992284 aacatcttatatgctaatatttgtatttataaattagttaaaaaatatggtcaaagtaagctatgtgaatagtgcacattgtaaaactatgacatgtatt 24992383  T
Q  119 ttgaaacagagg 130  Q
    ||||||| ||||    
T  24992384 ttgaaacggagg 24992395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 38916393 - 38916507
Alignment:
Q  16 aataacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatat 115  Q
    |||||||||| ||||||||| |||||||||| ||  ||||||||||| ||||||||||  |||||| |||||||||||| | ||||||| |  ||||| |    
T  38916393 aataacatctcacatgctaacatttgtatttatatgttagttaaaaagtatggtcaaagcaagtcatgtgaatagtgcatactgcaaaaatgcgacatgt 38916492  T
Q  116 attttgaaacagagg 130  Q
    |||||||||| ||||    
T  38916493 attttgaaacggagg 38916507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 7224281 - 7224196
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaa 104  Q
    ||||| |||||||||||||||||||||| || |||||||| ||| |||||||||| |||||||| | |||||| ||||||||||||    
T  7224281 aacattttacatgctaatatttgtatttataaattagttagaaagtatggtcaaagtaagtcaattaaatagtacacattgcaaaa 7224196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 39776746 - 39776661
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaa 104  Q
    ||||| |||||||||||||||||||||| ||  ||||||||||| || ||||||||||||| | |||||||||| |||||||||||    
T  39776746 aacattttacatgctaatatttgtatttatatgttagttaaaaagtacggtcaaaataagttatgtgaatagtgtacattgcaaaa 39776661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 32017329 - 32017251
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacat 97  Q
    ||||||||||||||||| |||||||||| || ||||||||||||||||| ||||| ||||| | ||||||| |||||||    
T  32017329 aacatcttacatgctaacatttgtatttatatattagttaaaaaatatgatcaaagtaagttatgtgaatattgcacat 32017251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 104
Target Start/End: Original strand, 12456786 - 12456871
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaa 104  Q
    |||||||||||| |||| ||||||||||||| ||||||||||||||||| | ||| ||||| | || |||||||||||||| ||||    
T  12456786 aacatcttacatactaacatttgtatttgtatattagttaaaaaatatgattaaagtaagttatgtaaatagtgcacattgtaaaa 12456871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 24916392 - 24916500
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagtt--aaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatata 116  Q
    ||||||||| |||||||||||||||||| || |||||||  |||||||||||||||| ||||  | ||||||||| ||||||| |||| |  ||||| ||    
T  24916392 aacatcttatatgctaatatttgtatttataaattagttaaaaaaaatatggtcaaagtaagctatgtgaatagtacacattgtaaaattgtgacatgta 24916491  T
Q  117 ttttgaaac 125  Q
    |||||||||    
T  24916492 ttttgaaac 24916500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 124
Target Start/End: Complemental strand, 27109804 - 27109700
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| ||||||| ||||||| |||  ||||| |||||||| |||||| | || |||| |||| ||| | |||||||    
T  27109804 aacatcttacatgctaatatttgtatttttacattaattaaaaagtat-atcaaagtaagtcaaatgaataatacatattgtaaaaattaaatatatatt 27109706  T
Q  119 ttgaaa 124  Q
    ||||||    
T  27109705 ttgaaa 27109700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 23 - 129
Target Start/End: Original strand, 20692541 - 20692645
Alignment:
Q  23 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 122  Q
    ||||||||| |||||||||||||| ||  || |||||||| ||||||||||||| |||||||| ||| |||||||||||||| |  ||| | |||||| |    
T  20692541 tcttacatgttaatatttgtatttata--ttggttaaaaagtatggtcaaaatacgtcaagtggataatgcacattgcaaaaatgtgacgtgtattttaa 20692638  T
Q  123 aacagag 129  Q
    |||||||    
T  20692639 aacagag 20692645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 11761182 - 11761128
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaa 73  Q
    ||||||||||||| |||||||||||||| || |||||||||||||||||||||||    
T  11761182 aacatcttacatgttaatatttgtatttatatattagttaaaaaatatggtcaaa 11761128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 62
Target Start/End: Original strand, 9050722 - 9050765
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaa 62  Q
    |||||||||||||||||||||||||||| |||||||||||||||    
T  9050722 aacatcttacatgctaatatttgtatttatacattagttaaaaa 9050765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 83
Target Start/End: Original strand, 12447564 - 12447626
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaag 83  Q
    ||||||||||||||||||||  ||||||  |||||||||||||| |||||||||| |||||||||    
T  12447564 aacatcttacatgctaatat--gtatttaaacattagttaaaaagtatggtcaaagtaagtcaag 12447626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 32400443 - 32400399
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaa 63  Q
    |||||||||||||||||||||||||||| || |||||||||||||    
T  32400443 aacatcttacatgctaatatttgtatttatatattagttaaaaaa 32400399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 12007778 - 12007889
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    ||||| ||||||||||  |||||||||| || |||| ||||||| || ||||||| ||||||| || ||||||||||| |  |||| |  ||||| ||||    
T  12007778 aacattttacatgctagcatttgtatttatatattaattaaaaagtagggtcaaattaagtcatgtaaatagtgcacaatataaaaatgcgacatgtatt 12007877  T
Q  119 ttgaaacagagg 130  Q
    ||||||| ||||    
T  12007878 ttgaaacggagg 12007889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 81
Target Start/End: Original strand, 27579579 - 27579638
Alignment:
Q  22 atcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtca 81  Q
    |||||||||||||| |||||||||| || |||||||||||||||| || ||| |||||||    
T  27579579 atcttacatgctaacatttgtatttatatattagttaaaaaatatagttaaagtaagtca 27579638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 3422356 - 3422432
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagtt---aaaaaatatggtcaaaataagtcaagtgaatagtg 92  Q
    ||||||||||||||||| |||||||||| || |||||||   ||||||||| |||||| ||||| | ||||||||||    
T  3422356 aacatcttacatgctaacatttgtatttatatattagttaaaaaaaaatatagtcaaagtaagttatgtgaatagtg 3422432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 18998803 - 18998753
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggt 69  Q
    |||||||||||| |||| |||||||||| || |||||||||||||||||||    
T  18998803 aacatcttacatactaacatttgtatttatatattagttaaaaaatatggt 18998753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 25 - 104
Target Start/End: Complemental strand, 6996090 - 6996012
Alignment:
Q  25 ttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaa 104  Q
    ||||||| ||| |||| ||||| || |||||||||||||||| ||  |||||||| | |||||||||||||||| |||||    
T  6996090 ttacatggtaacatttatatttatatattagttaaaaaatatagt-taaataagttatgtgaatagtgcacattacaaaa 6996012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 130
Target Start/End: Original strand, 12448275 - 12448329
Alignment:
Q  76 aagtcaagtgaatagtgcacattgcaaaagttagacatatattttgaaacagagg 130  Q
    ||||||||||||||||||  ||| ||||| |||||||| ||||||||||| ||||    
T  12448275 aagtcaagtgaatagtgcgtattacaaaaattagacatgtattttgaaacggagg 12448329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 128
Target Start/End: Complemental strand, 18598620 - 18598551
Alignment:
Q  59 aaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttgaaacaga 128  Q
    |||| |||||||||| ||| ||| || |||| |||||||||||||| |  ||||| ||||||||||||||    
T  18598620 aaaagtatggtcaaagtaattcatgtcaataatgcacattgcaaaaatgcgacatgtattttgaaacaga 18598551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 78
Target Start/End: Complemental strand, 37495712 - 37495667
Alignment:
Q  33 taatatttgtatttgtacattagttaaaaaatatggtcaaaataag 78  Q
    |||||||||||||| || ||||||||||||||||| ||||| ||||    
T  37495712 taatatttgtatttatatattagttaaaaaatatgatcaaagtaag 37495667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 26387025 - 26387097
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagt 91  Q
    ||||||||| ||||||| |||| ||||| ||  |||||||||||||||| ||||| ||||  |||| ||||||    
T  26387025 aacatcttaaatgctaacatttatatttatatgttagttaaaaaatatgatcaaagtaagctaagtaaatagt 26387097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 38698109 - 38698189
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattg 99  Q
    ||||||||||||| || ||||  | |||||| |||||| |||||||||||||||| ||  |||||| |||| |||| ||||    
T  38698109 aacatcttacatgatattattcatctttgtaaattagtaaaaaaatatggtcaaagtatatcaagtcaataatgcatattg 38698189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 92; Significance: 1e-44; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 19 - 138
Target Start/End: Complemental strand, 14237396 - 14237277
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||| ||||    
T  14237396 aacatcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtatt 14237297  T
Q  119 ttgaaacagaggaaataata 138  Q
    ||||||| |||||| |||||    
T  14237296 ttgaaacggaggaagtaata 14237277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 32998566 - 32998455
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||| ||||    
T  32998566 aacatcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtatt 32998467  T
Q  119 ttgaaacagagg 130  Q
    ||||||| ||||    
T  32998466 ttgaaacggagg 32998455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 19 - 125
Target Start/End: Complemental strand, 18044541 - 18044435
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||| ||||    
T  18044541 aacatcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtatt 18044442  T
Q  119 ttgaaac 125  Q
    |||||||    
T  18044441 ttgaaac 18044435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 42587394 - 42587505
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| || ||||| ||||    
T  42587394 aacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtatt 42587493  T
Q  119 ttgaaacagagg 130  Q
    ||||||| ||||    
T  42587494 ttgaaacggagg 42587505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 38957286 - 38957165
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||| |||||| ||||||||||||||||||| || ||||||||||    
T  38957286 aacatcttacatgctaatatttgtatttatacgttagttaaaaaatatggtcaaagtaaatcaagttaatagtgcacattgcaaaaattggacatatatt 38957187  T
Q  119 ttgaaacagaggaaataataac 140  Q
    ||||||| || |||||| ||||    
T  38957186 ttgaaacggatgaaatattaac 38957165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 19 - 124
Target Start/End: Complemental strand, 41263926 - 41263821
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || || || ||||    
T  41263926 aacatcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggatatgtatt 41263827  T
Q  119 ttgaaa 124  Q
    ||||||    
T  41263826 ttgaaa 41263821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 616899 - 616788
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| || |||||||||||| |||||||||| |||||||||||||||||||||||||||||| || ||||| ||||    
T  616899 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtatt 616800  T
Q  119 ttgaaacagagg 130  Q
    ||||||| ||||    
T  616799 ttgaaacggagg 616788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 623292 - 623181
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| || |||||||||||| |||||||||| |||||||||||||||||||||||||||||| || ||||| ||||    
T  623292 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtatt 623193  T
Q  119 ttgaaacagagg 130  Q
    ||||||| ||||    
T  623192 ttgaaacggagg 623181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 19 - 136
Target Start/End: Original strand, 3100641 - 3100758
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||||||||| ||| |||||| ||||||||||||||||||| || ||||| ||||    
T  3100641 aacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaaatcaagtaaatagtgcacattgcaaaaattggacatgtatt 3100740  T
Q  119 ttgaaacagaggaaataa 136  Q
    ||||||| |||| |||||    
T  3100741 ttgaaacggagggaataa 3100758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 19 - 124
Target Start/End: Original strand, 13216867 - 13216972
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||| ||||||||||||| ||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| |||||||| ||||    
T  13216867 aacatctttcatgctaatatttatatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattagacatgtatt 13216966  T
Q  119 ttgaaa 124  Q
    ||||||    
T  13216967 ttgaaa 13216972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 132133 - 132022
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||  | ||||| ||||    
T  132133 aacatcttacatgctaatatttgtatttatacattagttaaaaaatatgatcaaagtaagtcaagtgaatagtgcacgttgcaaaaagtggacatgtatt 132034  T
Q  119 ttgaaacagagg 130  Q
    ||||||| ||||    
T  132033 ttgaaacggagg 132022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 8394462 - 8394351
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    ||||||||| || |||||||||||| || ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| |||||||| ||||    
T  8394462 aacatcttaaatactaatatttgtacttatacattagttaaaaaatttggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattagacatgtatt 8394363  T
Q  119 ttgaaacagagg 130  Q
    ||||||| ||||    
T  8394362 ttgaaacggagg 8394351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 5878429 - 5878347
Alignment:
Q  22 atcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaa 104  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  5878429 atcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattgcaaaa 5878347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 19 - 125
Target Start/End: Complemental strand, 40494500 - 40494394
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| || |||||||||||| |||||||||| ||||||||||||||||||||||||| |||| || ||||| ||||    
T  40494500 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattggaaaaattggacatgtatt 40494401  T
Q  119 ttgaaac 125  Q
    |||||||    
T  40494400 ttgaaac 40494394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 19 - 128
Target Start/End: Complemental strand, 11637898 - 11637789
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    ||||||||||||||||||| |||||||| |||| |||||||||| || ||||||||||||||||||||||||||||||||| |||| || |||||| |||    
T  11637898 aacatcttacatgctaatacttgtatttatacactagttaaaaagtacggtcaaaataagtcaagtgaatagtgcacattgtaaaaattggacatacatt 11637799  T
Q  119 ttgaaacaga 128  Q
    ||||||||||    
T  11637798 ttgaaacaga 11637789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 4270238 - 4270349
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    ||||| ||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| || ||||| ||||    
T  4270238 aacatattacatgttaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattacaaaaattggacatgtatt 4270337  T
Q  119 ttgaaacagagg 130  Q
    || |||| ||||    
T  4270338 ttaaaacggagg 4270349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 2766194 - 2766300
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||| ||||| ||||||||||||||| |||||||||| |||||||||| ||||||||||||||||||| || || || ||||    
T  2766194 aacatcttacatgctaatatttatatttatacattagttaaaaagtatggtcaaagtaagtcaagtaaatagtgcacattgcaaaaattggatatgtatt 2766293  T
Q  119 ttgaaac 125  Q
    |||||||    
T  2766294 ttgaaac 2766300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 125
Target Start/End: Complemental strand, 35403632 - 35403526
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    ||||||||||||| |||||| ||||||| ||||||||||||||| |||||||||| || ||||||||||||||||||||||||||| || ||||| ||||    
T  35403632 aacatcttacatgttaatatctgtatttatacattagttaaaaagtatggtcaaagtatgtcaagtgaatagtgcacattgcaaaaattggacatgtatt 35403533  T
Q  119 ttgaaac 125  Q
    |||||||    
T  35403532 ttgaaac 35403526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 22489433 - 22489514
Alignment:
Q  32 ctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacat 113  Q
    ||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  22489433 ctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattagacat 22489514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 36642004 - 36642116
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaata-tggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatat 117  Q
    |||||||||||||||||||||||||||| || || ||||||||| || |||||||| |||||||||||||||||||||||||||||| ||  |||| |||    
T  36642004 aacatcttacatgctaatatttgtatttatatataagttaaaaagtaatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattgaacatgtat 36642103  T
Q  118 tttgaaacagagg 130  Q
    |||||||| ||||    
T  36642104 tttgaaacggagg 36642116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 33 - 125
Target Start/End: Complemental strand, 24524202 - 24524110
Alignment:
Q  33 taatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttgaaac 125  Q
    |||||||||||||| ||||||||||||||| |||||||||| |||||||||| ||||||||||||||||||| ||  |||| |||||||||||    
T  24524202 taatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtaaatagtgcacattgcaaaatttgaacatgtattttgaaac 24524110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 29 - 130
Target Start/End: Complemental strand, 36167182 - 36167081
Alignment:
Q  29 atgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttgaaacaga 128  Q
    |||||||||||||||||| ||||||||| ||||| |||  ||||| ||||||||||||||||| |||||||||||| | | |||| |||||| |||| ||    
T  36167182 atgctaatatttgtatttatacattagtgaaaaagtataatcaaagtaagtcaagtgaatagtacacattgcaaaaatgatacatgtattttaaaacgga 36167083  T
Q  129 gg 130  Q
    ||    
T  36167082 gg 36167081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 5173368 - 5173282
Alignment:
Q  18 taacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaa 104  Q
    |||||||||||||| |||||||||||||| || |||||||||| |||||| ||||| ||| |||  |||||||| ||||||||||||    
T  5173368 taacatcttacatgttaatatttgtatttatatattagttaaataatatgatcaaagtaaatcatatgaatagtacacattgcaaaa 5173282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 3370405 - 3370487
Alignment:
Q  22 atcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaa 104  Q
    |||||||||  ||| |||||||||| || |||| |||||||||||||||||| ||||||| ||||| ||| ||||||||||||    
T  3370405 atcttacatattaacatttgtatttatatattaattaaaaaatatggtcaaagtaagtcatgtgaacagtccacattgcaaaa 3370487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 6414111 - 6414217
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    ||||| |||||| | ||| |||| |||| || |||| ||||||| |||||||||| ||||||| |||||||||||||||||||||| |  ||||| ||||    
T  6414111 aacattttacataccaatctttgcatttatatattatttaaaaagtatggtcaaagtaagtcatgtgaatagtgcacattgcaaaaatgtgacatttatt 6414210  T
Q  119 ttgaaac 125  Q
    || ||||    
T  6414211 ttaaaac 6414217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 33700219 - 33700299
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattg 99  Q
    |||||||||| | |||| |||||||||| || ||||||||||||||||||||||| ||||  | ||||||||||| |||||    
T  33700219 aacatcttacttactaacatttgtatttatatattagttaaaaaatatggtcaaagtaagctatgtgaatagtgcgcattg 33700299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 113
Target Start/End: Complemental strand, 18090444 - 18090351
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacat 113  Q
    ||||||||| ||||||| |||| ||||| || ||||||||||||||||| || ||||||||||  | |||||||||||||| |||| || |||||    
T  18090444 aacatcttatatgctaacatttatatttatatattagttaaaaaatatgatc-aaataagtcatataaatagtgcacattgaaaaaattcgacat 18090351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 38497188 - 38497088
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||| ||||||||||||||||||| ||||||||||||           ||| ||||||||||||||||||||||||| |||| ||  |||||||||    
T  38497188 aacatcttccatgctaatatttgtatttatacattagttaa-----------aaagtaagtcaagtgaatagtgcacattgtaaaaattgaacatatatt 38497100  T
Q  119 ttgaaacagagg 130  Q
    || |||| ||||    
T  38497099 ttaaaacggagg 38497088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 125
Target Start/End: Original strand, 13217223 - 13217273
Alignment:
Q  75 taagtcaagtgaatagtgcacattgcaaaagttagacatatattttgaaac 125  Q
    |||||||||||||||||| ||||||||||| || ||||| |||||||||||    
T  13217223 taagtcaagtgaatagtgtacattgcaaaaattggacatgtattttgaaac 13217273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 40716669 - 40716715
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaata 65  Q
    ||||||||||||||||| |||||||||| || |||||||||||||||    
T  40716669 aacatcttacatgctaaaatttgtatttatatattagttaaaaaata 40716715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 18035216 - 18035163
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaa 72  Q
    ||||||||||||||||| ||||| |||| || |||||||||||| |||||||||    
T  18035216 aacatcttacatgctaacatttgcatttatatattagttaaaaattatggtcaa 18035163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 73
Target Start/End: Complemental strand, 18020982 - 18020928
Alignment:
Q  22 atcttacatgctaata---tttgtatttgtacattagttaaaaaatatggtcaaa 73  Q
    |||||||||||||| |   |||||||||||| |||||||||||||||||||||||    
T  18020982 atcttacatgctaacacattttgtatttgtatattagttaaaaaatatggtcaaa 18020928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 8058971 - 8059030
Alignment:
Q  20 acatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagt 79  Q
    |||||||| ||| || ||||| | |||||| |||||| ||||||||||||||||||||||    
T  8058971 acatcttatatgatattatttatctttgtatattagtaaaaaaatatggtcaaaataagt 8059030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 125
Target Start/End: Complemental strand, 9632271 - 9632165
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    ||||||||||||||||| ||| |||||| ||  ||||| ||||||||||   |||||||   | ||||||||| ||||||| |||| |  ||||| ||||    
T  9632271 aacatcttacatgctaacattagtatttatatgttagtgaaaaaatatgactaaaataaactatgtgaatagtacacattgtaaaattgcgacatgtatt 9632172  T
Q  119 ttgaaac 125  Q
    |||||||    
T  9632171 ttgaaac 9632165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 89
Target Start/End: Complemental strand, 13138247 - 13138177
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaata 89  Q
    ||||||||||||| || ||||| | |||||  ||||||  |||||||||||||||||| ||||||| ||||    
T  13138247 aacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaaatatgtcaagtcaata 13138177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 10982633 - 10982690
Alignment:
Q  16 aataacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaa 73  Q
    ||||| |||||| || ||||||||||| ||| || ||| |||||||||||||||||||    
T  10982633 aataagatcttatatactaatatttgtttttatatattggttaaaaaatatggtcaaa 10982690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 90; Significance: 1e-43; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 19 - 128
Target Start/End: Original strand, 17257797 - 17257906
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||| |||||||| ||||    
T  17257797 aacatcttacatgctaatatttgtatttgtacattagttaaaaagtatggtcaaagtaagtcaagtgaataatgcacattgcaaaaattagacatgtatt 17257896  T
Q  119 ttgaaacaga 128  Q
    ||||||||||    
T  17257897 ttgaaacaga 17257906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 18668834 - 18668945
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| || ||||| ||||    
T  18668834 aacatcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagcaagtcaagtgaatagtgcacattgcaaaaattggacatgtatt 18668933  T
Q  119 ttgaaacagagg 130  Q
    ||||||| ||||    
T  18668934 ttgaaacggagg 18668945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 4148047 - 4147936
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||| || ||||| ||||    
T  4148047 aacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaataatgcacattgcaaaaattggacatgtatt 4147948  T
Q  119 ttgaaacagagg 130  Q
    ||||||| ||||    
T  4147947 ttgaaacggagg 4147936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 19 - 125
Target Start/End: Complemental strand, 22054888 - 22054782
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||| ||||||||| || ||||| ||||    
T  22054888 aacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcatattgcaaaaattggacatgtatt 22054789  T
Q  119 ttgaaac 125  Q
    |||||||    
T  22054788 ttgaaac 22054782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 19088104 - 19088215
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| || |||||||||||| | |||||||| |||||||||||||||||||||||||||||| || ||||| ||||    
T  19088104 aacatcttacatgctaatatttgtatttatatattagttaaaaagtttggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtatt 19088203  T
Q  119 ttgaaacagagg 130  Q
    ||||||| ||||    
T  19088204 ttgaaacggagg 19088215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 24624087 - 24624198
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| || |||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||  |||| ||||    
T  24624087 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattgaacatgtatt 24624186  T
Q  119 ttgaaacagagg 130  Q
    ||||||| ||||    
T  24624187 ttgaaacggagg 24624198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 32414825 - 32414936
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| || |||||||||||| |||||||||| ||||||||||||||||||||||||| |||| || ||||| ||||    
T  32414825 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgaaaaaattggacatgtatt 32414924  T
Q  119 ttgaaacagagg 130  Q
    ||||||| ||||    
T  32414925 ttgaaacggagg 32414936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 32671932 - 32671821
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    ||||||||||| |||||||||||||||| ||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||| || ||||| ||||    
T  32671932 aacatcttacacgctaatatttgtatttatacattagttaaaaattatggtcaaagtaagtgaagtgaatagtgcacattgcaaaaattggacatgtatt 32671833  T
Q  119 ttgaaacagagg 130  Q
    ||||||| ||||    
T  32671832 ttgaaacggagg 32671821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 19 - 124
Target Start/End: Original strand, 17213930 - 17214035
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| || |||||||||||| ||| |||||| |||||||| ||||||||||||||||||||| |||||||| ||||    
T  17213930 aacatcttacatgctaatatttgtatttataaattagttaaaaagtatagtcaaagtaagtcaaatgaatagtgcacattgcaaaaattagacatgtatt 17214029  T
Q  119 ttgaaa 124  Q
    ||||||    
T  17214030 ttgaaa 17214035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 6563342 - 6563231
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| || |||||||||||| |||||||||| |||||||||| ||||||||||||||||||| ||  |||| ||||    
T  6563342 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtaaatagtgcacattgcaaaaattgaacatgtatt 6563243  T
Q  119 ttgaaacagagg 130  Q
    ||||||| ||||    
T  6563242 ttgaaacggagg 6563231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 23 - 126
Target Start/End: Original strand, 20226448 - 20226551
Alignment:
Q  23 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 122  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||| ||  |||| ||||||||    
T  20226448 tcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacattgcaaaaattgtacatgtattttga 20226547  T
Q  123 aaca 126  Q
    ||||    
T  20226548 aaca 20226551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 23 - 126
Target Start/End: Original strand, 22120432 - 22120535
Alignment:
Q  23 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 122  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||| ||  |||| ||||||||    
T  22120432 tcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacattgcaaaaattgtacatgtattttga 22120531  T
Q  123 aaca 126  Q
    ||||    
T  22120532 aaca 22120535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 19 - 110
Target Start/End: Original strand, 24955542 - 24955633
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttaga 110  Q
    |||||||||||||||||||||||||||| | |||||||||||||||||| ||||||||||||||||||||| |||||||| ||||| |||||    
T  24955542 aacatcttacatgctaatatttgtatttattcattagttaaaaaatatgatcaaaataagtcaagtgaataatgcacattacaaaaattaga 24955633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 3989410 - 3989511
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    ||||||||||||||||||| ||||||||  |||||||||||||| |||||||||| |||||||||||||||||||||||||||||| || ||||| ||||    
T  3989410 aacatcttacatgctaatagttgtattta-acattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtatt 3989508  T
Q  119 ttg 121  Q
    |||    
T  3989509 ttg 3989511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 15383076 - 15383182
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| || |||||||||||| |||||| ||| |||||||| |||||| |||||||||||||| || ||||| ||||    
T  15383076 aacatcttacatgctaatatttgtatttatagattagttaaaaagtatggttaaagtaagtcaaatgaataatgcacattgcaaaaattggacatgtatt 15383175  T
Q  119 ttgaaac 125  Q
    |||||||    
T  15383176 ttgaaac 15383182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 1040940 - 1040855
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaa 104  Q
    ||||||||||||| |||||||||||||| ||||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||    
T  1040940 aacatcttacatgttaatatttgtatttatacattagttaaaaagtatggtcaaagtaaatcaagtgaatagtgcacattgcaaaa 1040855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 19 - 119
Target Start/End: Original strand, 20437159 - 20437260
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaa-tatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatat 117  Q
    ||||||||||||| | |||||||||||| |||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||| |||||||| |||    
T  20437159 aacatcttacatgttgatatttgtatttatacattagttaaaaaaatatgatcaaagtaagtcaagtgaatagtgcacattgcaaaaattagacatgtat 20437258  T
Q  118 tt 119  Q
    ||    
T  20437259 tt 20437260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 19 - 135
Target Start/End: Complemental strand, 28477869 - 28477753
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||| ||||||||||||||||||||||| || |||||||||||| ||||||||||  |||||| ||||||||| |||||||||||| |  ||||| ||||    
T  28477869 aacaacttacatgctaatatttgtatttatatattagttaaaaattatggtcaaagcaagtcatgtgaatagtacacattgcaaaattgtgacatgtatt 28477770  T
Q  119 ttgaaacagaggaaata 135  Q
    |||||| ||| ||||||    
T  28477769 ttgaaatagatgaaata 28477753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 22 - 125
Target Start/End: Original strand, 31569175 - 31569278
Alignment:
Q  22 atcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttg 121  Q
    ||||||||| ||||||||||||||| ||||||| | ||||| ||| |||||| ||||||||||||||| |||||||||||||| || ||||| |||||||    
T  31569175 atcttacattctaatatttgtatttatacattaataaaaaagtatagtcaaagtaagtcaagtgaataatgcacattgcaaaaattggacatgtattttg 31569274  T
Q  122 aaac 125  Q
    ||||    
T  31569275 aaac 31569278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 128
Target Start/End: Complemental strand, 29790322 - 29790213
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||| ||||||||||||||||||||||| || |||||||||||| ||||||| || ||||||| |||||||||  ||||||||||| |  ||||| ||||    
T  29790322 aacaacttacatgctaatatttgtatttatatattagttaaaaattatggtccaagtaagtcatgtgaatagtatacattgcaaaattgcgacatgtatt 29790223  T
Q  119 ttgaaacaga 128  Q
    ||||||||||    
T  29790222 ttgaaacaga 29790213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 19 - 139
Target Start/End: Original strand, 25475959 - 25476074
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    ||||||||||||||||||     ||||| ||||||||||||||| || ||||||| ||||||||||||||| |||||||||||||| || ||||| ||||    
T  25475959 aacatcttacatgctaat-----tatttatacattagttaaaaagtaaggtcaaagtaagtcaagtgaataatgcacattgcaaaaattggacatgtatt 25476053  T
Q  119 ttgaaacagaggaaataataa 139  Q
    ||||||| |||| | ||||||    
T  25476054 ttgaaacggagggagtaataa 25476074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 19 - 135
Target Start/End: Complemental strand, 29693999 - 29693883
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||| ||||||||||| ||||||||||| || |||||||||||| ||||||||||  |||||| ||||||||| |||||||||||| |  ||||| ||||    
T  29693999 aacaacttacatgctagtatttgtatttatatattagttaaaaattatggtcaaagcaagtcatgtgaatagtacacattgcaaaattgtgacatgtatt 29693900  T
Q  119 ttgaaacagaggaaata 135  Q
    |||||| ||| ||||||    
T  29693899 ttgaaatagatgaaata 29693883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 19 - 128
Target Start/End: Complemental strand, 15337604 - 15337495
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    ||||| |||||||||||||||||||||| || ||||||||||||||||||||||| ||||| | ||||||| |||| |||| |||| |  || || ||||    
T  15337604 aacattttacatgctaatatttgtatttatatattagttaaaaaatatggtcaaagtaagttatgtgaataatgcatattgtaaaattgtgaaatgtatt 15337505  T
Q  119 ttgaaacaga 128  Q
    ||||||||||    
T  15337504 ttgaaacaga 15337495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 15 - 124
Target Start/End: Original strand, 21540771 - 21540880
Alignment:
Q  15 aaataacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacata 114  Q
    ||||||||| ||||||  |||||||||||||| || | ||||| |||| |||||||||| |||||||| |||||||||||||||| |||| ||| ||||     
T  21540771 aaataacattttacattataatatttgtatttataaactagtttaaaagtatggtcaaagtaagtcaaatgaatagtgcacattgtaaaaattaaacatg 21540870  T
Q  115 tattttgaaa 124  Q
    ||||||||||    
T  21540871 tattttgaaa 21540880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 22 - 124
Target Start/End: Complemental strand, 12226088 - 12225986
Alignment:
Q  22 atcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttg 121  Q
    ||||||||||||||||||| ||||| ||||||||||||||| |||| |||||||||||| ||||||||| || |||   |||| ||||| || |||||||    
T  12226088 atcttacatgctaatatttatatttatacattagttaaaaagtatgatcaaaataagtccagtgaatagcgcgcatcataaaaattagatatgtattttg 12225989  T
Q  122 aaa 124  Q
    |||    
T  12225988 aaa 12225986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 19240741 - 19240823
Alignment:
Q  22 atcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaa 104  Q
    ||||||| ||| ||||||||||||| || ||||||||||||||||||||||||||||| | |||||||||  |||||||||||    
T  19240741 atcttacttgcaaatatttgtatttatatattagttaaaaaatatggtcaaaataagttatgtgaatagtatacattgcaaaa 19240823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 19 - 98
Target Start/End: Original strand, 10298719 - 10298798
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacatt 98  Q
    ||||| ||||||||||| |||||||||| || |||||| |||||||||||||||| ||||  | ||||||||||||||||    
T  10298719 aacattttacatgctaacatttgtatttatatattagtgaaaaaatatggtcaaattaagctatgtgaatagtgcacatt 10298798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 125
Target Start/End: Complemental strand, 4440966 - 4440860
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    ||||||||||||||||| |||||||||| ||  |||  |||||| |||||||||| ||||| |  ||||||||||||||| ||||| |   |||||||||    
T  4440966 aacatcttacatgctaacatttgtatttatatgttacctaaaaagtatggtcaaagtaagttatatgaatagtgcacattacaaaaatgcaacatatatt 4440867  T
Q  119 ttgaaac 125  Q
    |||||||    
T  4440866 ttgaaac 4440860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 125
Target Start/End: Complemental strand, 10520584 - 10520478
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    ||||| ||||||  |||||| ||||||| |||||||||||| |  |||||||||| |||||||| |||||| | |||||||||||| ||  |||| ||||    
T  10520584 aacattttacatattaatatctgtatttatacattagttaataggtatggtcaaagtaagtcaaatgaataatacacattgcaaaaattgaacatgtatt 10520485  T
Q  119 ttgaaac 125  Q
    |||||||    
T  10520484 ttgaaac 10520478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 125
Target Start/End: Complemental strand, 31869824 - 31869718
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    ||||||||||||||||| |||||||||| || ||||||||||||| ||||||||| ||| | | | |||||||| |||||| ||||    ||||| ||||    
T  31869824 aacatcttacatgctaacatttgtatttatatattagttaaaaaaaatggtcaaagtaaattatgggaatagtgtacattgtaaaatcgcgacatgtatt 31869725  T
Q  119 ttgaaac 125  Q
    |||||||    
T  31869724 ttgaaac 31869718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 71
Target Start/End: Complemental strand, 8101720 - 8101664
Alignment:
Q  15 aaataacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtca 71  Q
    ||||||||||||||||| ||| |||||||||| || |||||||||||||||||||||    
T  8101720 aaataacatcttacatgttaacatttgtatttatatattagttaaaaaatatggtca 8101664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 23158055 - 23158115
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagt 79  Q
    ||||||||||||| ||| |||||||||| || |||||||||||||| |||||||| |||||    
T  23158055 aacatcttacatgttaacatttgtatttatatattagttaaaaaatgtggtcaaagtaagt 23158115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 77
Target Start/End: Complemental strand, 5495362 - 5495307
Alignment:
Q  22 atcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataa 77  Q
    |||||||||||||| |||||||||| || ||||||||||||| ||| |||||||||    
T  5495362 atcttacatgctaacatttgtatttatatattagttaaaaaacatgatcaaaataa 5495307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 3623856 - 3623909
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaa 73  Q
    ||||||||||||||||| |||||||||| || ||||||| |||||||||||||||    
T  3623856 aacatcttacatgctaacatttgtatttatatattagtt-aaaaatatggtcaaa 3623909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 73
Target Start/End: Complemental strand, 1260543 - 1260492
Alignment:
Q  22 atcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaa 73  Q
    ||||||| |||||| | |||||||| || |||||||||||||||||||||||    
T  1260543 atcttacgtgctaacaattgtatttatatattagttaaaaaatatggtcaaa 1260492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 98
Target Start/End: Complemental strand, 17155265 - 17155186
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacatt 98  Q
    ||||||||||||||||| |||||||||| ||  |||||||  || |||| ||||| || |||| |||||||||| |||||    
T  17155265 aacatcttacatgctaacatttgtatttatatgttagttatgaagtatgatcaaagtaggtcatgtgaatagtgaacatt 17155186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 98
Target Start/End: Complemental strand, 19788693 - 19788614
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacatt 98  Q
    ||||||||||||| || ||||| |||||||| ||||||  ||||||||||| ||| || |||| || || ||||||||||    
T  19788693 aacatcttacatgatattatttatatttgtatattagtagaaaaatatggttaaagtatgtcaggtcaaaagtgcacatt 19788614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 14214065 - 14214138
Alignment:
Q  25 ttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacatt 98  Q
    ||||||||||| |||| ||||| || ||| ||||||||||| |||||||| |||||   |||||| ||||||||    
T  14214065 ttacatgctaacatttatatttatatattggttaaaaaatacggtcaaaacaagtcggatgaataatgcacatt 14214138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 98
Target Start/End: Complemental strand, 19762383 - 19762307
Alignment:
Q  22 atcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacatt 98  Q
    |||||||||| || ||||| |||||||| |||||| |||||||||||| ||| || |||| || || |||| |||||    
T  19762383 atcttacatgatattatttatatttgtatattagtaaaaaaatatggttaaactatgtcaggtcaaaagtgtacatt 19762307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 89; Significance: 6e-43; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 7439019 - 7438907
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||| ||||||||| |||||||| ||||    
T  7439019 aacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaaataagtcaagtgaataatgcatattgcaaaaattagacatgtatt 7438920  T
Q  119 ttgaaacagagga 131  Q
    |||||||||||||    
T  7438919 ttgaaacagagga 7438907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 16778621 - 16778510
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||||||||| |||| |||||||||||||||||||||||||||| ||||| ||||    
T  16778621 aacatcttacatgctaatatttgtatttatacattagttaaaaattatggtcaaagtaagccaagtgaatagtgcacattgcaaaagttggacatgtatt 16778522  T
Q  119 ttgaaacagagg 130  Q
    ||||||| ||||    
T  16778521 ttgaaacggagg 16778510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 13 - 125
Target Start/End: Original strand, 7457862 - 7457973
Alignment:
Q  13 tgaaataacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagaca 112  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||| |||||||    
T  7457862 tgaaacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagt-aagtgaatagtgcacattgcaaaacttagaca 7457960  T
Q  113 tatattttgaaac 125  Q
    | |||||||||||    
T  7457961 tgtattttgaaac 7457973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 19 - 139
Target Start/End: Complemental strand, 47156143 - 47156023
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| || |||||||||||| |||||||||| |||||||||||||||||||||||||||||| || ||||| ||||    
T  47156143 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtatt 47156044  T
Q  119 ttgaaacagaggaaataataa 139  Q
    ||||||| |||| | ||||||    
T  47156043 ttgaaacggagggagtaataa 47156023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 20885219 - 20885108
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||| |||| || ||||| ||||    
T  20885219 aacatcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaatagtccacattgtaaaaattggacatgtatt 20885120  T
Q  119 ttgaaacagagg 130  Q
    ||||||| ||||    
T  20885119 ttgaaacggagg 20885108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 28061661 - 28061772
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| || |||||||||||| |||||||||| |||||||||||||||||||||||||||||| || ||||| ||||    
T  28061661 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtatt 28061760  T
Q  119 ttgaaacagagg 130  Q
    ||||||| ||||    
T  28061761 ttgaaacggagg 28061772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 32431504 - 32431615
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||| ||||||||||||||| ||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||| || ||||||||||    
T  32431504 aacatcttacatactaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaataatgcacattgcaaaaatttgacatatatt 32431603  T
Q  119 ttgaaacagagg 130  Q
    ||||||| ||||    
T  32431604 ttgaaacggagg 32431615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 36623424 - 36623313
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| || |||||||||||| |||||||||| |||||||||||||||||||||||||||||| || ||||| ||||    
T  36623424 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtatt 36623325  T
Q  119 ttgaaacagagg 130  Q
    ||||||| ||||    
T  36623324 ttgaaacggagg 36623313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 19 - 125
Target Start/End: Complemental strand, 40256173 - 40256067
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||| ||||||||||||| || ||||| ||||    
T  40256173 aacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagagcacattgcaaaaattggacatgtatt 40256074  T
Q  119 ttgaaac 125  Q
    |||||||    
T  40256073 ttgaaac 40256067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 12 - 130
Target Start/End: Complemental strand, 41898111 - 41897993
Alignment:
Q  12 atgaaataacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagac 111  Q
    |||||| |||||||||||||||||||||||||||| || |||||||||||| |||| ||||| |||||||||||||||||||||||||||||| || |||    
T  41898111 atgaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatgatcaaagtaagtcaagtgaatagtgcacattgcaaaaattggac 41898012  T
Q  112 atatattttgaaacagagg 130  Q
    || ||||||||||| ||||    
T  41898011 atgtattttgaaacggagg 41897993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 42890489 - 42890595
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| || |||||||||||| ||||||||||||||||||| ||||||||||||||||||||| || ||||| ||||    
T  42890489 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaaataagtcaaatgaatagtgcacattgcaaaaattggacatgtatt 42890588  T
Q  119 ttgaaac 125  Q
    |||||||    
T  42890589 ttgaaac 42890595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 19 - 132
Target Start/End: Complemental strand, 36585225 - 36585112
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| |||||||||| |||| |||||| |||||||||||||||||||||||||||||||||| || || || ||||    
T  36585225 aacatcttacatgctaatatttgtatttatacattagtttaaaagtatggtaaaaataagtcaagtgaatagtgcacattgcaaaaattggatatgtatt 36585126  T
Q  119 ttgaaacagaggaa 132  Q
    ||||||| ||||||    
T  36585125 ttgaaacggaggaa 36585112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 40090064 - 40090175
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| || |||||||||||| |||||||||| ||||||||||||||||||||||||| |||| || ||||||||||    
T  40090064 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgaaaaaattggacatatatt 40090163  T
Q  119 ttgaaacagagg 130  Q
    || |||| ||||    
T  40090164 ttaaaacggagg 40090175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 19 - 125
Target Start/End: Complemental strand, 6174952 - 6174846
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||||||| | |||||||| |||||||||||| |||||||| || ||||||||||    
T  6174952 aacatcttacatgctaatgtttgtatttatacattagttaaaaaatatggtcacagtaagtcaaatgaatagtgcaccttgcaaaaattggacatatatt 6174853  T
Q  119 ttgaaac 125  Q
    |||||||    
T  6174852 ttgaaac 6174846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 39130072 - 39130178
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||| | || ||||    
T  39130072 aacatcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagaaagtcaagtgaatagtgcacattgcaaaaattaaagatgtatt 39130171  T
Q  119 ttgaaac 125  Q
    || ||||    
T  39130172 ttaaaac 39130178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 22 - 130
Target Start/End: Original strand, 38851996 - 38852104
Alignment:
Q  22 atcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttg 121  Q
    ||||||||||||||||||||||||| || |||||||||||| |||||||||| ||||||||||||||||||||||||| |||| || ||||| |||||||    
T  38851996 atcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattggaaaaattggacatgtattttg 38852095  T
Q  122 aaacagagg 130  Q
    |||| ||||    
T  38852096 aaacggagg 38852104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 125
Target Start/End: Complemental strand, 46479945 - 46479839
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| ||||||||||||||| | |||||||| ||||||||| ||||||||||||||| |||| ||| |||| ||||    
T  46479945 aacatcttacatgctaatatttgtatttatacattagttaaaaattttggtcaaagtaagtcaagcgaatagtgcacattgtaaaaattaaacatgtatt 46479846  T
Q  119 ttgaaac 125  Q
    |||||||    
T  46479845 ttgaaac 46479839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 44732128 - 44732043
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaa 104  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||| ||||| ||||||||||||||||||||||||||||||    
T  44732128 aacatcttacatgctaatatttgtatttatacattagttaaaaagtatgatcaaagtaagtcaagtgaatagtgcacattgcaaaa 44732043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 48602552 - 48602441
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| || |||||||||||| |||||||||| |||||||| |||||||||||||||| |||| || | ||| ||||    
T  48602552 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacattggaaaaattgggcatgtatt 48602453  T
Q  119 ttgaaacagagg 130  Q
    ||||||| ||||    
T  48602452 ttgaaacggagg 48602441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 11502727 - 11502833
Alignment:
Q  20 acatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattt 119  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||| ||||| ||||| |||| |||| |||||||| ||||| || ||||| |||||    
T  11502727 acatcttacatgctaatatttgtatttatacattagttaaaaagtatgatcaaagtaagttaagtcaataatgcacattacaaaaattggacatgtattt 11502826  T
Q  120 tgaaaca 126  Q
    |||||||    
T  11502827 tgaaaca 11502833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 25566694 - 25566799
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    ||||||| |||||||||||||||||||  ||||||||||| ||| |||||||||| ||||||||||||||||||||||||| |||| || ||||| ||||    
T  25566694 aacatctcacatgctaatatttgtatta-tacattagttagaaagtatggtcaaagtaagtcaagtgaatagtgcacattgtaaaaattggacatgtatt 25566792  T
Q  119 ttgaaac 125  Q
    |||||||    
T  25566793 ttgaaac 25566799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 6766696 - 6766807
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    ||||||||||||||||| ||||| |||| |||||||||||||||||||||||||||||||| | ||||||| |||| |||| |||| |  ||||| ||||    
T  6766696 aacatcttacatgctaacatttgcatttatacattagttaaaaaatatggtcaaaataagttatgtgaataatgcagattgtaaaattgcgacatgtatt 6766795  T
Q  119 ttgaaacagagg 130  Q
    ||||||| ||||    
T  6766796 ttgaaacggagg 6766807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 42877502 - 42877391
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||| ||||||||| ||||| ||||||||||||||| |||||||||| ||||| || | ||||||||||||| ||||| || ||||| ||||    
T  42877502 aacatcttacattctaatatttttatttatacattagttaaaaagtatggtcaaagtaagttaaattaatagtgcacattacaaaatttggacatgtatt 42877403  T
Q  119 ttgaaacagagg 130  Q
    ||||||| ||||    
T  42877402 ttgaaacggagg 42877391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 35117241 - 35117157
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaa 104  Q
    |||||||||||||||||||||| ||||| |||||||||| |||| |||||||||| |||||||||||||||||||| |||||||||    
T  35117241 aacatcttacatgctaatatttatatttatacattagtt-aaaagtatggtcaaagtaagtcaagtgaatagtgcatattgcaaaa 35117157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 124
Target Start/End: Complemental strand, 41088703 - 41088598
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    ||||||||||||| ||||||||| |||| |||||||||||||||||||||||||| |||||||  |||| |||||| |||| |||| || ||||| ||||    
T  41088703 aacatcttacatgttaatatttgcatttatacattagttaaaaaatatggtcaaagtaagtcagatgaacagtgcatattgtaaaatttggacatgtatt 41088604  T
Q  119 ttgaaa 124  Q
    ||||||    
T  41088603 ttgaaa 41088598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 35 - 124
Target Start/End: Original strand, 46322127 - 46322216
Alignment:
Q  35 atatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttgaaa 124  Q
    |||||||||||  ||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||| || ||||| ||||||||||    
T  46322127 atatttgtattgatacattagttaaaaagtatggtcaaagtaagtcaagtgaataatgcacattgcaaaaattggacatgtattttgaaa 46322216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 30342189 - 30342105
Alignment:
Q  20 acatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaa 104  Q
    ||||||||||| ||||||||||||||| ||||||||||||||| ||| |||||| ||| ||||||||||| ||||||||||||||    
T  30342189 acatcttacatactaatatttgtatttatacattagttaaaaagtatagtcaaagtaaatcaagtgaataatgcacattgcaaaa 30342105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 30 - 125
Target Start/End: Complemental strand, 8683923 - 8683828
Alignment:
Q  30 tgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttgaaac 125  Q
    ||||||||||||||||| || |||||||||||| |||||||||| ||||||||||||||| |||||||| ||||| || ||||| |||||| ||||    
T  8683923 tgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaataatgcacatttcaaaaattggacatgtattttaaaac 8683828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 122
Target Start/End: Complemental strand, 3851187 - 3851090
Alignment:
Q  22 atcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttg 121  Q
    ||||||| || |||||||||||||| ||||||||||||||| ||| |||||| |||||||||||||   |||||||||||||| || |||||||||||||    
T  3851187 atcttacgtgttaatatttgtatttatacattagttaaaaagtattgtcaaagtaagtcaagtgaa---tgcacattgcaaaaattggacatatattttg 3851091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 129
Target Start/End: Original strand, 5788523 - 5788633
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||| ||||||||||||||| ||||||||| ||||| |||| | ||| |||||||| |||||||||| |||  ||||| |||||||| ||||    
T  5788523 aacatcttacatactaatatttgtatttatacattagtaaaaaagtatgattaaagtaagtcaattgaatagtgctcatcacaaaaattagacatgtatt 5788622  T
Q  119 ttgaaacagag 129  Q
    || ||||||||    
T  5788623 tttaaacagag 5788633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 2198718 - 2198607
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||| || |||||||||||||| ||||||||||||||| |||| ||||||||| |||  |||||||| |||||||||||  ||| |||| ||||    
T  2198718 aacatcttacttgttaatatttgtatttatacattagttaaaaagtatgttcaaaataaatcagatgaatagtacacattgcaaatattacacatctatt 2198619  T
Q  119 ttgaaacagagg 130  Q
    || |||| ||||    
T  2198618 ttaaaacggagg 2198607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 4131649 - 4131755
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||  ||||||||| || ||||||||||||||||||| ||| ||||| | |||||||||  |||||| |||| |  ||||||||||    
T  4131649 aacatcttacatgctaacttttgtatttatatattagttaaaaaatatggttaaagtaagttatgtgaatagtatacattgtaaaattgcgacatatatt 4131748  T
Q  119 ttgaaac 125  Q
    |||||||    
T  4131749 ttgaaac 4131755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 5529131 - 5529021
Alignment:
Q  15 aaataacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacata 114  Q
    ||||||||||||||||||||| |||| |||||||| |||||||||||||||| ||||||||||   | || ||||||| |||||| |||| |  |||||     
T  5529131 aaataacatcttacatgctaacatttttatttgtatattagttaaaaaatatagtcaaaataatctacgtaaatagtgtacattgtaaaattaggacatg 5529032  T
Q  115 tattttgaaac 125  Q
    |||||||||||    
T  5529031 tattttgaaac 5529021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 46103516 - 46103582
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtg 85  Q
    |||||||||||||||||||||||||||| || |||||||||||| |||||||||| |||||||||||    
T  46103516 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtg 46103582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 98
Target Start/End: Complemental strand, 26161714 - 26161633
Alignment:
Q  17 ataacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacatt 98  Q
    ||||||| |||||||||||||||||||||| || ||||||||||||  ||||||||||||| ||| ||||||||||| ||||    
T  26161714 ataacattttacatgctaatatttgtatttatatattagttaaaaagcatggtcaaaataaatcatgtgaatagtgcgcatt 26161633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 35570195 - 35570306
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagtt-----aaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacat 113  Q
    ||||||||||||||||| ||||||||||||| |||||||     |||||||||||||||| |||||   ||||||||||||||||| |||| |  |||||    
T  35570195 aacatcttacatgctaaaatttgtatttgtatattagttaaaaaaaaaaatatggtcaaagtaagttttgtgaatagtgcacattgtaaaattgcgacat 35570294  T
Q  114 atattttgaaac 125  Q
     |||||||||||    
T  35570295 gtattttgaaac 35570306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 19 - 125
Target Start/End: Complemental strand, 7169242 - 7169136
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    ||||||||| ||| |||||||||||||| || |||||||||||||||| |||||| ||| ||| |||||||   |||||||||||| |  ||||| ||||    
T  7169242 aacatcttatatgttaatatttgtatttatatattagttaaaaaatatagtcaaagtaaatcatgtgaatatgacacattgcaaaattatgacatgtatt 7169143  T
Q  119 ttgaaac 125  Q
    |||||||    
T  7169142 ttgaaac 7169136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 19 - 125
Target Start/End: Complemental strand, 36341736 - 36341630
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||| |||| |||| ||||| ||  ||||||||||| ||| || ||| ||||||| |||||||||||||||||||||| |  ||||| ||||    
T  36341736 aacatcttacattctaacatttatatttatatgttagttaaaaagtatcgttaaattaagtcatgtgaatagtgcacattgcaaaaatgcgacatgtatt 36341637  T
Q  119 ttgaaac 125  Q
    |||||||    
T  36341636 ttgaaac 36341630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 41134634 - 41134735
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| ||||||||||     ||||||||||| |||||||| |||||||| ||||||| |||| ||  |||| ||||    
T  41134634 aacatcttacatgctaatatttgtatttatacattagtt-----atatggtcaaagtaagtcaaatgaatagtacacattgtaaaaattgaacatgtatt 41134728  T
Q  119 ttgaaac 125  Q
    || ||||    
T  41134729 ttaaaac 41134735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 27045554 - 27045660
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    ||||||||| ||||||| |||||||||| || ||||||||||||||||||||||| |||  || |||||||||  |||||| |||| |   |||| ||||    
T  27045554 aacatcttatatgctaacatttgtatttatatattagttaaaaaatatggtcaaagtaaaccatgtgaatagtatacattgtaaaattgcaacatgtatt 27045653  T
Q  119 ttgaaac 125  Q
    |||||||    
T  27045654 ttgaaac 27045660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 16870622 - 16870739
Alignment:
Q  15 aaataacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacata 114  Q
    ||||||||| |||| ||| || |||| ||||| || ||||||||| ||||||||||||| ||||| |  ||||||||||| |||| ||||    |||||     
T  16870622 aaataacattttacgtgcaaacatttatatttatatattagttaacaaatatggtcaaagtaagttatttgaatagtgcatattgtaaaaccgcgacatg 16870721  T
Q  115 tattttgaaacagaggaa 132  Q
    ||||||| ||||||||||    
T  16870722 tattttggaacagaggaa 16870739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 21379860 - 21379816
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaa 63  Q
    |||||||||||||||||||||||||||| |||||||| |||||||    
T  21379860 aacatcttacatgctaatatttgtatttatacattagctaaaaaa 21379816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 87
Target Start/End: Complemental strand, 34750618 - 34750550
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaa 87  Q
    ||||||||||||| ||| |||| |||||||| |||||||||||| || ||||||| ||||||| |||||    
T  34750618 aacatcttacatgttaacatttttatttgtatattagttaaaaagtagggtcaaagtaagtcatgtgaa 34750550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 62
Target Start/End: Original strand, 23707565 - 23707612
Alignment:
Q  15 aaataacatcttacatgctaatatttgtatttgtacattagttaaaaa 62  Q
    |||||| |||| |||||||||||||||||||| |||||||||||||||    
T  23707565 aaataatatctcacatgctaatatttgtatttatacattagttaaaaa 23707612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 104
Target Start/End: Original strand, 49101959 - 49102044
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaa 104  Q
    |||||||||||||| || |||||||||| |  |||||||||||||||||   ||||||||| |  ||||||||||| |||| ||||    
T  49101959 aacatcttacatgcaaaaatttgtatttatgtattagttaaaaaatatgacaaaaataagttatatgaatagtgcatattgtaaaa 49102044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 38767205 - 38767265
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagt 79  Q
    ||||||||| || || | |||||||||| || ||||||||||||||||||||||| |||||    
T  38767205 aacatcttatatactgacatttgtatttatatattagttaaaaaatatggtcaaagtaagt 38767265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 125
Target Start/End: Complemental strand, 42662284 - 42662197
Alignment:
Q  37 atttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttgaaac 125  Q
    |||||||||| || |||||||||||| |||||||||| ||||  | ||||||| | |||||||||||| |  ||||| |||||||||||    
T  42662284 atttgtatttatatattagttaaaaagtatggtcaaagtaag-aatgtgaataatacacattgcaaaattgcgacatgtattttgaaac 42662197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 69
Target Start/End: Original strand, 37467456 - 37467503
Alignment:
Q  22 atcttacatgctaatatttgtatttgtacattagttaaaaaatatggt 69  Q
    |||||| ||||||| |||||||||| || |||||||||||||||||||    
T  37467456 atcttaaatgctaacatttgtatttatatattagttaaaaaatatggt 37467503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 98
Target Start/End: Original strand, 30462171 - 30462249
Alignment:
Q  20 acatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacatt 98  Q
    |||||||| ||| || ||||| | |||||| |||||| |||||||||||||||| ||||| |||| || | ||||||||    
T  30462171 acatcttatatgatattatttatctttgtatattagtaaaaaaatatggtcaaagtaagttaagtcaaaattgcacatt 30462249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 73
Target Start/End: Complemental strand, 3785623 - 3785582
Alignment:
Q  32 ctaatatttgtatttgtacattagttaaaaaatatggtcaaa 73  Q
    |||| |||||||||| || |||||||||||||||||||||||    
T  3785623 ctaacatttgtatttatatattagttaaaaaatatggtcaaa 3785582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 104
Target Start/End: Complemental strand, 45331992 - 45331943
Alignment:
Q  55 gttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaa 104  Q
    ||||||||||||||||||| |||||||  |||||| |||| |||||||||    
T  45331992 gttaaaaaatatggtcaaagtaagtcatatgaataatgcatattgcaaaa 45331943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 98
Target Start/End: Original strand, 49110634 - 49110695
Alignment:
Q  37 atttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacatt 98  Q
    |||||||||  || ||||||||||||||||||||||| ||| |||  |||||||| ||||||    
T  49110634 atttgtattaatatattagttaaaaaatatggtcaaagtaaatcatttgaatagtacacatt 49110695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 36515955 - 36515875
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattg 99  Q
    ||||||||| || |||| |||||||||| || |||  |||||||||||||| ||| |||||   ||||||||| |||||||    
T  36515955 aacatcttatatactaacatttgtatttatatattgattaaaaaatatggttaaagtaagttgtgtgaatagtacacattg 36515875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 40348553 - 40348633
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattg 99  Q
    ||||||||| ||| || ||||| | |||||| ||||||  |||||||||||||||||| |||| || || |||||| ||||    
T  40348553 aacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaaatatgtcaggtcaaaagtgcaaattg 40348633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 43
Target Start/End: Original strand, 46321294 - 46321322
Alignment:
Q  15 aaataacatcttacatgctaatatttgta 43  Q
    |||||||||||||||||||||||||||||    
T  46321294 aaataacatcttacatgctaatatttgta 46321322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 85; Significance: 1e-40; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 19 - 138
Target Start/End: Complemental strand, 33803638 - 33803518
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaa-tatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatat 117  Q
    ||||||||||| |||||||||| ||||| |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| |||||||| |||    
T  33803638 aacatcttacaagctaatatttatatttatacattagttaaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattagacatgtat 33803539  T
Q  118 tttgaaacagaggaaataata 138  Q
    ||||||| |||||||||||||    
T  33803538 tttgaaatagaggaaataata 33803518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 19 - 125
Target Start/End: Complemental strand, 21797672 - 21797566
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| || ||||| ||||    
T  21797672 aacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaaataaatcaagtgaatagtgcacattgcaaaaattggacatgtatt 21797573  T
Q  119 ttgaaac 125  Q
    |||||||    
T  21797572 ttgaaac 21797566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 13499481 - 13499592
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| || |||||||||||| |||||||||| |||||||||||||||||||||||||||||| || ||||| ||||    
T  13499481 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtatt 13499580  T
Q  119 ttgaaacagagg 130  Q
    ||||||| ||||    
T  13499581 ttgaaacggagg 13499592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 42490342 - 42490453
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| || |||||||||||| |||||||||| |||||||||||||||||||||||||||||| || ||||| ||||    
T  42490342 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtatt 42490441  T
Q  119 ttgaaacagagg 130  Q
    ||||||| ||||    
T  42490442 ttgaaacggagg 42490453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 27010620 - 27010731
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| || |||||||||||| | |||||||| |||||||||||||||||||||||||||||| || ||||| ||||    
T  27010620 aacatcttacatgctaatatttgtatttatatattagttaaaaagtttggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtatt 27010719  T
Q  119 ttgaaacagagg 130  Q
    ||||||| ||||    
T  27010720 ttgaaacggagg 27010731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 34912288 - 34912399
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||  ||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| || ||||| ||||    
T  34912288 aacatcttacaatctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtatt 34912387  T
Q  119 ttgaaacagagg 130  Q
    ||||||| ||||    
T  34912388 ttgaaacggagg 34912399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 39866287 - 39866398
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| || |||||||||||| |||||||||| |||||||||||||||||||||||||||||| || ||||| ||||    
T  39866287 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtatt 39866386  T
Q  119 ttgaaacagagg 130  Q
    || |||| ||||    
T  39866387 ttaaaacggagg 39866398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 42761629 - 42761740
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| || |||||||||||| |||||||||| ||||||||||||||||||||||||| |||| || ||||| ||||    
T  42761629 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgtaaaaattggacatgtatt 42761728  T
Q  119 ttgaaacagagg 130  Q
    ||||||| ||||    
T  42761729 ttgaaacggagg 42761740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 19 - 125
Target Start/End: Complemental strand, 6910450 - 6910344
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||| |||||| ||||||| ||||| ||||    
T  6910450 aacatcttacatgttaatatttgtatttatacattagttaaaaaatatggttaaagtaagtcaagtgaatagtgtacattgtaaaagttggacatgtatt 6910351  T
Q  119 ttgaaac 125  Q
    |||||||    
T  6910350 ttgaaac 6910344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 27334877 - 27334983
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| || |||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||  |||| ||||    
T  27334877 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattgaacatgtatt 27334976  T
Q  119 ttgaaac 125  Q
    |||||||    
T  27334977 ttgaaac 27334983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 137
Target Start/End: Complemental strand, 54507757 - 54507639
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||| ||||||| ||||||||||||||| |||  |||||||||||||||||||||||||| ||||||||| || || || ||||    
T  54507757 aacatcttacatgctaatatctgtatttatacattagttaaaaagtataatcaaaataagtcaagtgaatagtgcatattgcaaaaattggatatgtatt 54507658  T
Q  119 ttgaaacagaggaaataat 137  Q
    ||||||| |||||| ||||    
T  54507657 ttgaaacggaggaagtaat 54507639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 38137940 - 38137855
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaa 104  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||    
T  38137940 aacatcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaaataaatcaagcgaatagtgcagattgcaaaa 38137855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 20765312 - 20765201
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    ||||||||||||| |||||||||||||| || |||||||||||| ||| |||||| |||||||||||||||||||||||||||||| || ||||| ||||    
T  20765312 aacatcttacatgttaatatttgtatttatatattagttaaaaagtatagtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtatt 20765213  T
Q  119 ttgaaacagagg 130  Q
    || |||| ||||    
T  20765212 ttaaaacggagg 20765201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 33415915 - 33415804
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| || |||||||||||| |||||||||| |||||||| | ||||  ||||||||||||| || ||||| ||||    
T  33415915 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaaataaataacgcacattgcaaaaattggacatgtatt 33415816  T
Q  119 ttgaaacagagg 130  Q
    ||||||||||||    
T  33415815 ttgaaacagagg 33415804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 30213920 - 30213845
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgca 94  Q
    |||||||||||||||||||||||||||| || |||||||||||| |||||||||||||||||||||||||||||||    
T  30213920 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaaataagtcaagtgaatagtgca 30213845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 36227661 - 36227576
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaa 104  Q
    |||||||||||||||||||||||||||| ||||||| || ||||||||||||||| |||||||| |||||||||| ||||||||||    
T  36227661 aacatcttacatgctaatatttgtatttatacattaattgaaaaatatggtcaaagtaagtcaaatgaatagtgcgcattgcaaaa 36227576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 42 - 130
Target Start/End: Complemental strand, 19823993 - 19823905
Alignment:
Q  42 tatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttgaaacagagg 130  Q
    ||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| || ||||| ||||||||||| ||||    
T  19823993 tatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaacggagg 19823905  T

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Target: chr3; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 21005409 - 21005298
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||| ||||| || |||| ||||||| |||||||||| ||||| ||||||||||||||| |||||||| ||  |||| ||||    
T  21005409 aacatcttacatgctaatatttatatttatatattaattaaaaagtatggtcaaagtaagtgaagtgaatagtgcacgttgcaaaaattgaacatgtatt 21005310  T
Q  119 ttgaaacagagg 130  Q
    ||||||| ||||    
T  21005309 ttgaaacggagg 21005298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 43467888 - 43467994
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||| |||||||||| | |||| ||||| ||||||||| |||||||||| ||||||||||||||||| |||||||||||| || | ||| ||||    
T  43467888 aacatcttacctgctaatattagaatttatacatcagttaaaaagtatggtcaaagtaagtcaagtgaatagtacacattgcaaaaattggtcatgtatt 43467987  T
Q  119 ttgaaac 125  Q
    |||||||    
T  43467988 ttgaaac 43467994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 43181501 - 43181608
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaa-tatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatat 117  Q
    |||||||||||| ||||||||| ||||| |||||||||||||||| |||||||||| ||| |||||||||||||||||||| | ||| ||| |||| |||    
T  43181501 aacatcttacatactaatatttatatttatacattagttaaaaaagtatggtcaaagtaaatcaagtgaatagtgcacattacgaaaattaaacatgtat 43181600  T
Q  118 tttgaaac 125  Q
    ||| ||||    
T  43181601 ttttaaac 43181608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 19 - 128
Target Start/End: Original strand, 41252909 - 41253018
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    ||||||||| ||||||| |||||||||| || ||||||||||||||||||| ||| ||||  |  |||||||||||||||| |||| |  ||||||||||    
T  41252909 aacatcttatatgctaacatttgtatttatatattagttaaaaaatatggttaaagtaagctatatgaatagtgcacattgtaaaattgcgacatatatt 41253008  T
Q  119 ttgaaacaga 128  Q
    ||||||||||    
T  41253009 ttgaaacaga 41253018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 128
Target Start/End: Original strand, 15332952 - 15333061
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    ||||||||||||||||| |||||||||| || |||||||||||||| ||||||||  |||  | ||||||||||||||||| |||| |  ||||| ||||    
T  15332952 aacatcttacatgctaacatttgtatttatatattagttaaaaaatttggtcaaagcaagctatgtgaatagtgcacattgtaaaattgcgacatgtatt 15333051  T
Q  119 ttgaaacaga 128  Q
    || |||||||    
T  15333052 ttaaaacaga 15333061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 44561900 - 44561816
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaa 103  Q
    |||||||||||||  || |||||||||| ||  ||||||||||| |||||||||| ||||||| |||||||||||||||||||||    
T  44561900 aacatcttacatgtcaacatttgtatttatatgttagttaaaaagtatggtcaaagtaagtcatgtgaatagtgcacattgcaaa 44561816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 48 - 125
Target Start/End: Complemental strand, 45613660 - 45613583
Alignment:
Q  48 tacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttgaaac 125  Q
    ||||||||||||||| ||| |||||| |||||||||| ||||||||||||||||||| || |||||  ||||||||||    
T  45613660 tacattagttaaaaagtatagtcaaagtaagtcaagtaaatagtgcacattgcaaaaattggacatgaattttgaaac 45613583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 19 - 125
Target Start/End: Complemental strand, 25527520 - 25527416
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    ||||||||||||| |||||||||||||| || || ||||||||||||||||| || ||||||| |||||||   |||||||||||| |  ||||| ||||    
T  25527520 aacatcttacatgttaatatttgtatttatatatcagttaaaaaatatggtcgaagtaagtcatgtgaata--tcacattgcaaaaatgcgacatgtatt 25527423  T
Q  119 ttgaaac 125  Q
    | |||||    
T  25527422 tcgaaac 25527416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 19 - 104
Target Start/End: Original strand, 3430420 - 3430505
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaa 104  Q
    ||||| |||||||||||||||| ||||  || ||||||||||||||||||||||| ||||| |  | |||||||||||||| ||||    
T  3430420 aacattttacatgctaatatttttattaatatattagttaaaaaatatggtcaaagtaagttatataaatagtgcacattgtaaaa 3430505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 27813445 - 27813511
Alignment:
Q  30 tgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcaca 96  Q
    |||||| |||||||||| || |||||||||||||||| |||||||||||  | ||||||||||||||    
T  27813445 tgctaacatttgtatttatatattagttaaaaaatatagtcaaaataagctatgtgaatagtgcaca 27813511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 52167325 - 52167240
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaa 104  Q
    ||||||||||||  |||||||||||||| || |||| ||||||| ||||||||||| ||||||  |||||| | |||||| |||||    
T  52167325 aacatcttacatattaatatttgtatttatatattaattaaaaagtatggtcaaaagaagtcatatgaataatacacattacaaaa 52167240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 135
Target Start/End: Complemental strand, 22786744 - 22786630
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||| || ||||||  || || |||||||||||||||  |||||| ||||  | ||||||||||||||||  |||| |  ||||| || |    
T  22786744 aacatcttacatgcaaacatttgt--ttatatattagttaaaaaatagagtcaaagtaagctatgtgaatagtgcacattaaaaaattgcgacatgtagt 22786647  T
Q  119 ttgaaacagaggaaata 135  Q
    ||||||| |||||||||    
T  22786646 ttgaaacggaggaaata 22786630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 125
Target Start/End: Complemental strand, 32220930 - 32220873
Alignment:
Q  68 gtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttgaaac 125  Q
    |||||| ||||||||||||||||| |||||||||||| ||| |||| |||||| ||||    
T  32220930 gtcaaagtaagtcaagtgaatagtacacattgcaaaaattaaacatgtattttaaaac 32220873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 3017902 - 3017847
Alignment:
Q  24 cttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagt 79  Q
    |||| ||||||| |||||||||| || | |||||||||||||||||||||| ||||    
T  3017902 cttatatgctaacatttgtatttatataatagttaaaaaatatggtcaaaacaagt 3017847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 16434802 - 16434861
Alignment:
Q  20 acatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagt 79  Q
    |||||||| ||| || ||||| | |||||| |||||| ||||||||||||||||||||||    
T  16434802 acatcttatatgatattatttatctttgtatattagtaaaaaaatatggtcaaaataagt 16434861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 128
Target Start/End: Original strand, 15568084 - 15568189
Alignment:
Q  22 atcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttg 121  Q
    |||||||| | ||| |||||||||| || ||||||||||||||||| ||||| |||   | || |||| ||||||||| |||| |  ||||| |||||||    
T  15568084 atcttacacggtaacatttgtatttatatattagttaaaaaatatgatcaaattaaactatgtaaataatgcacattgtaaaattgcgacat-tattttg 15568182  T
Q  122 aaacaga 128  Q
    |||||||    
T  15568183 aaacaga 15568189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 41751556 - 41751610
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaa 73  Q
    |||||| || ||||||| |||||||||| || ||||||||||||||||| |||||    
T  41751556 aacatcgtaaatgctaacatttgtatttatatattagttaaaaaatatgatcaaa 41751610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 48334667 - 48334716
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggt 69  Q
    |||||||||||||||||||||||||||| || | ||||||||||| |||||    
T  48334667 aacatcttacatgctaatatttgtatttatata-tagttaaaaaaaatggt 48334716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 14412260 - 14412301
Alignment:
Q  38 tttgtatttgtacattagttaaaaaatatggtcaaaataagt 79  Q
    ||||||||| || ||||||||||||||| |||||||||||||    
T  14412260 tttgtatttatatattagttaaaaaatacggtcaaaataagt 14412301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 17643844 - 17643795
Alignment:
Q  22 atcttacatgctaatatttgtatttgtacattagttaaaaaatatggtca 71  Q
    |||||||||||||| ||||||||||  | |||||||||||||||| ||||    
T  17643844 atcttacatgctaacatttgtatttacatattagttaaaaaatatagtca 17643795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 135
Target Start/End: Complemental strand, 22782380 - 22782266
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||| || ||||||  || ||  ||||||||||||||  |||||| ||||  | ||||||||||||||||  |||| |  ||||| || |    
T  22782380 aacatcttacatgcaaacatttgt--ttatattttagttaaaaaatagagtcaaagtaagctatgtgaatagtgcacattaaaaaattgcgacatgtagt 22782283  T
Q  119 ttgaaacagaggaaata 135  Q
    ||||||| |||||||||    
T  22782282 ttgaaacggaggaaata 22782266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 23940508 - 23940561
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaa 72  Q
    ||||||||||||| ||| |||| ||||| || ||||||||||||||| ||||||    
T  23940508 aacatcttacatgttaacatttttatttatatattagttaaaaaataaggtcaa 23940561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 79
Target Start/End: Original strand, 33128068 - 33128125
Alignment:
Q  22 atcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagt 79  Q
    |||||||||| |||||||| ||||| |  |||||||||||| |||| |||||||||||    
T  33128068 atcttacatgttaatatttatatttatgtattagttaaaaagtatgatcaaaataagt 33128125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 48143909 - 48143966
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaata 76  Q
    ||||||||||||| || ||||| | |||||| ||||||  ||||||||||||||||||    
T  48143909 aacatcttacatgatattatttatctttgtaaattagtagaaaaatatggtcaaaata 48143966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 19327476 - 19327556
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattg 99  Q
    ||||||||| || |||| |||||||| | |  |||||||||||||||||||  || ||||| | |||||||||||| ||||    
T  19327476 aacatcttagatcctaacatttgtatctatctattagttaaaaaatatggtttaagtaagttatgtgaatagtgcatattg 19327556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 98
Target Start/End: Complemental strand, 22755616 - 22755536
Alignment:
Q  18 taacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacatt 98  Q
    |||||||||| |||| |  |||||| |||||| || |||  |||||||||||||||| | || | ||||||||||||||||    
T  22755616 taacatcttatatgcaataatttgtctttgtatataagtagaaaaatatggtcaaaacatgttatgtgaatagtgcacatt 22755536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 84; Significance: 6e-40; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 39358262 - 39358151
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| || ||||| ||||    
T  39358262 aacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtatt 39358163  T
Q  119 ttgaaacagagg 130  Q
    ||||||| ||||    
T  39358162 ttgaaacggagg 39358151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 2183103 - 2183214
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||  ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| || ||||| ||||    
T  2183103 aacatcttacatgctaatatttgtattcatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtatt 2183202  T
Q  119 ttgaaacagagg 130  Q
    ||||||| ||||    
T  2183203 ttgaaacggagg 2183214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 5405112 - 5405001
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| || |||||||||||| |||||||||| |||||||||||||||||||||||||||||| || ||||| ||||    
T  5405112 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtatt 5405013  T
Q  119 ttgaaacagagg 130  Q
    ||||||| ||||    
T  5405012 ttgaaacggagg 5405001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 8042168 - 8042279
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| || |||||||||||| |||||||||| |||||||||||||||||||||||||||||| || ||||| ||||    
T  8042168 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtatt 8042267  T
Q  119 ttgaaacagagg 130  Q
    ||||||| ||||    
T  8042268 ttgaaacggagg 8042279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 19141212 - 19141323
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| || |||||||||||| |||||||||| |||||||||||||||||||||||||||||| || ||||| ||||    
T  19141212 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtatt 19141311  T
Q  119 ttgaaacagagg 130  Q
    ||||||| ||||    
T  19141312 ttgaaacggagg 19141323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 19 - 125
Target Start/End: Complemental strand, 7608165 - 7608059
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| || |||||||||||| |||||||||| |||||||||||||||||||||||||||||| || ||||| ||||    
T  7608165 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtatt 7608066  T
Q  119 ttgaaac 125  Q
    |||||||    
T  7608065 ttgaaac 7608059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 19 - 125
Target Start/End: Complemental strand, 44365273 - 44365167
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||| ||||||||| || ||||| ||||    
T  44365273 aacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcatattgcaaaaattggacatgtatt 44365174  T
Q  119 ttgaaac 125  Q
    |||||||    
T  44365173 ttgaaac 44365167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 21 - 125
Target Start/End: Complemental strand, 6223180 - 6223076
Alignment:
Q  21 catcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatttt 120  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||  |||| ||||||    
T  6223180 catcttacatgctaatatttgtatttatatattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattgaacatgtatttt 6223081  T
Q  121 gaaac 125  Q
    |||||    
T  6223080 gaaac 6223076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 11841739 - 11841841
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||| || ||||| ||||    
T  11841739 aacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacattgcaaaaattggacatgtatt 11841838  T
Q  119 ttg 121  Q
    |||    
T  11841839 ttg 11841841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 15 - 124
Target Start/End: Complemental strand, 36072294 - 36072185
Alignment:
Q  15 aaataacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacata 114  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||| |||||||| ||||||||||| |||| |||| || |||||     
T  36072294 aaataacatcttacatgctaatatttatatttatacattagttaaaaaatatgatcaaagtaagtcaaatgaatagtgcatattgtaaaaattggacatg 36072195  T
Q  115 tattttgaaa 124  Q
    ||||||||||    
T  36072194 tattttgaaa 36072185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 22 - 132
Target Start/End: Complemental strand, 19262793 - 19262683
Alignment:
Q  22 atcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttg 121  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||| || | |||||||||||||| |||| || ||||| |||||||    
T  19262793 atcttacatgctaatatttgtatttatatattagttaaaaaatatggtcaaagtaagttaaataaatagtgcacattgaaaaaattggacatgtattttg 19262694  T
Q  122 aaacagaggaa 132  Q
    |||| ||||||    
T  19262693 aaacggaggaa 19262683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 125
Target Start/End: Complemental strand, 7799963 - 7799857
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    ||||||||||||||||| |||||||||| || |||||||||||| || ||||||| ||||||| |||||||||||||||||||||| |  ||||| ||||    
T  7799963 aacatcttacatgctaacatttgtatttatatattagttaaaaagtagggtcaaagtaagtcatgtgaatagtgcacattgcaaaaatgcgacatgtatt 7799864  T
Q  119 ttgaaac 125  Q
    |||||||    
T  7799863 ttgaaac 7799857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 90
Target Start/End: Original strand, 13125294 - 13125362
Alignment:
Q  22 atcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatag 90  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||    
T  13125294 atcttagatgctaatatttgtatttatacattagttaaaaaatatggtgaaagtaagtcaagtgaatag 13125362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 35 - 124
Target Start/End: Complemental strand, 33607476 - 33607387
Alignment:
Q  35 atatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttgaaa 124  Q
    |||||||||||| ||||||||||||||| |||  ||||| |||||||| |||||||||||||||| |||| || ||||| ||||||||||    
T  33607476 atatttgtatttatacattagttaaaaagtataatcaaagtaagtcaaatgaatagtgcacattgtaaaaattggacatgtattttgaaa 33607387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 9172292 - 9172358
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtg 85  Q
    |||||||||||||||||  ||||||||| |||||||||||||||||||||||||| ||||| |||||    
T  9172292 aacatcttacatgctaacttttgtatttatacattagttaaaaaatatggtcaaagtaagtgaagtg 9172358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 19 - 125
Target Start/End: Complemental strand, 11931807 - 11931701
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    ||||||||| ||||||| |||||||||| || ||||||||||||||||||||||| ||||| |  |||||| |||| |||| |||| |  ||||| ||||    
T  11931807 aacatcttaaatgctaacatttgtatttatatattagttaaaaaatatggtcaaagtaagttatatgaataatgcatattgtaaaattgcgacatgtatt 11931708  T
Q  119 ttgaaac 125  Q
    |||||||    
T  11931707 ttgaaac 11931701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 19 - 125
Target Start/End: Complemental strand, 32774707 - 32774601
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    ||||||||||||  |||||||| ||| | || |||||||||||| |||||||||| |||||||||| |||||||||||||  |||| ||  |||| ||||    
T  32774707 aacatcttacatattaatatttatatgtatatattagttaaaaagtatggtcaaagtaagtcaagtaaatagtgcacattataaaacttgaacatgtatt 32774608  T
Q  119 ttgaaac 125  Q
    |||||||    
T  32774607 ttgaaac 32774601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 43444689 - 43444791
Alignment:
Q  22 atcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttg 121  Q
    |||||||||||||| |||||||||| || |||||||||||||||||||||||  || | | ||||||| ||||||||| |||| |  ||||| |||||||    
T  43444689 atcttacatgctaacatttgtatttatatattagttaaaaaatatggtcaaagaaaattatgtgaataatgcacattgtaaaattgcgacatgtattttg 43444788  T
Q  122 aaa 124  Q
    |||    
T  43444789 aaa 43444791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 44644986 - 44644905
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgc 100  Q
    ||||||||| ||| |||||||| ||||| || |||||||||||| |||||||||| |||| ||| |||||||||||||||||    
T  44644986 aacatcttatatgttaatatttatatttatatattagttaaaaagtatggtcaaagtaagacaattgaatagtgcacattgc 44644905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 103
Target Start/End: Original strand, 22839073 - 22839157
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaa 103  Q
    ||||||||| ||||||| ||||  |||| || | ||||||||||||||||||||| ||||| | |||||||||||||||||||||    
T  22839073 aacatcttatatgctaacattttaatttatatactagttaaaaaatatggtcaaagtaagttatgtgaatagtgcacattgcaaa 22839157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 24252070 - 24251970
Alignment:
Q  25 ttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttgaaa 124  Q
    ||||||||||| |||||||||| || ||||||||||||||||||||||||||||| | ||||||| | || |||| |||| |  || || ||||||||||    
T  24252070 ttacatgctaacatttgtatttatatattagttaaaaaatatggtcaaaataagttatgtgaataatacatattgtaaaattgtgaaatgtattttgaaa 24251971  T
Q  125 c 125  Q
    |    
T  24251970 c 24251970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 104
Target Start/End: Original strand, 36177723 - 36177809
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaa-aatatggtcaaaataagtcaagtgaatagtgcacattgcaaaa 104  Q
    ||||||||| ||| |||||||| ||||| || ||||||||||| |||||||||||||||| ||| ||||||| ||| ||||||||||    
T  36177723 aacatcttagatgttaatatttttatttatatattagttaaaaaaatatggtcaaaataaatcatgtgaataatgcgcattgcaaaa 36177809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 23 - 96
Target Start/End: Original strand, 31610803 - 31610876
Alignment:
Q  23 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcaca 96  Q
    |||||||| |||| |||||||||| || ||||||||||||| ||||| ||||||||| | ||||||||||||||    
T  31610803 tcttacattctaacatttgtatttatatattagttaaaaaaaatggtaaaaataagttatgtgaatagtgcaca 31610876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 124
Target Start/End: Original strand, 9006939 - 9007035
Alignment:
Q  28 catgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttgaaa 124  Q
    |||||||| |||||||||| || ||||||||||||||||||||||| ||||  |  |||||| ||||||||| |||| |  ||||| ||||||||||    
T  9006939 catgctaacatttgtatttataaattagttaaaaaatatggtcaaagtaagctacatgaataatgcacattgtaaaattgcgacatgtattttgaaa 9007035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 119
Target Start/End: Original strand, 36719470 - 36719565
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    ||||||||| |||||||||||||||||| |||     ||||||| |||||||||| |||||||||||||||||||   |||||||| || ||||| ||||    
T  36719470 aacatcttaaatgctaatatttgtatttatac-----ttaaaaagtatggtcaaagtaagtcaagtgaatagtgcttgttgcaaaaattggacatgtatt 36719564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 38839189 - 38839136
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaa 72  Q
    ||||||||| ||||||| |||||||||| || ||||||||||||||||||||||    
T  38839189 aacatcttatatgctaacatttgtatttatatattagttaaaaaatatggtcaa 38839136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 124
Target Start/End: Complemental strand, 42133868 - 42133763
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||| |||||||| |||||||||| || ||||||||||||||||| ||||| |||   |  |||||||||||||||  |||| |  ||||| ||||    
T  42133868 aacatctttcatgctaacatttgtatttatatattagttaaaaaatatgatcaaagtaaactatatgaatagtgcacattttaaaattacgacatgtatt 42133769  T
Q  119 ttgaaa 124  Q
    ||||||    
T  42133768 ttgaaa 42133763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 38292068 - 38292008
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagt 79  Q
    ||||||||||||| ||| |||||||||| || | ||||||||||||||||||||| |||||    
T  38292068 aacatcttacatgttaacatttgtatttatatactagttaaaaaatatggtcaaagtaagt 38292008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 19165929 - 19166034
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    ||||||||||||| ||| | |||||||| || |||| |||||||  ||| |||||| |||||| ||||||| ||||||||||||||    ||||||||||    
T  19165929 aacatcttacatgataacaattgtatttatatattaattaaaaaccatgatcaaaacaagtcatgtgaata-tgcacattgcaaaaacgcgacatatatt 19166027  T
Q  119 ttgaaac 125  Q
    || ||||    
T  19166028 ttaaaac 19166034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 13117470 - 13117530
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagt 79  Q
    ||||||||| || ||||||||| ||||| || || |||||||||||||||||||| |||||    
T  13117470 aacatcttagatactaatatttatatttatatatcagttaaaaaatatggtcaaagtaagt 13117530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 92
Target Start/End: Original strand, 31904027 - 31904099
Alignment:
Q  20 acatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtg 92  Q
    ||||||||| || |||||||| ||||| || ||||||||||||||||||||| | ||||  | ||||||||||    
T  31904027 acatcttacgtgataatatttatatttatatattagttaaaaaatatggtcagagtaagctatgtgaatagtg 31904099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 2831821 - 2831762
Alignment:
Q  20 acatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagt 79  Q
    |||||||||||| || ||||| |||||||| ||||||  ||||||||||||||| |||||    
T  2831821 acatcttacatgatattatttatatttgtatattagtagaaaaatatggtcaaagtaagt 2831762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 53 - 104
Target Start/End: Complemental strand, 13598523 - 13598472
Alignment:
Q  53 tagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaa 104  Q
    |||||||||| |||||||||| |||||||  |||||||||||||||| ||||    
T  13598523 tagttaaaaagtatggtcaaagtaagtcatatgaatagtgcacattgaaaaa 13598472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 16865170 - 16865108
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtca 81  Q
    |||| |||||||||||| |||||||||| ||  ||||||||||| ||| |||||| |||||||    
T  16865170 aacaacttacatgctaacatttgtatttatatgttagttaaaaagtatcgtcaaagtaagtca 16865108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 89
Target Start/End: Original strand, 30708874 - 30708944
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaata 89  Q
    ||||||||||||| || ||||| | |||||| ||||||  ||||||||||||||||||  |||||| ||||    
T  30708874 aacatcttacatgatattatttatctttgtaaattagtagaaaaatatggtcaaaatatatcaagtcaata 30708944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 98
Target Start/End: Complemental strand, 40471850 - 40471772
Alignment:
Q  20 acatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacatt 98  Q
    |||||||| ||| || ||||| | |||||| |||||| |||||||||| ||||||||||| |||| || | ||||||||    
T  40471850 acatcttatatgatattatttatctttgtatattagtaaaaaaatatgatcaaaataagttaagtcaaaattgcacatt 40471772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 32887025 - 32886952
Alignment:
Q  16 aataacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaata 89  Q
    ||||||||||||| || |||||||| ||||||||  ||||||| |||||||| | ||| ||||| | |||||||    
T  32887025 aataacatcttacgtgttaatatttatatttgtatgttagttagaaaatatgattaaagtaagttatgtgaata 32886952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 3837271 - 3837323
Alignment:
Q  25 ttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataa 77  Q
    ||||||||| |||||| ||||| || ||||||||||||||| ||| |||||||    
T  3837271 ttacatgctgatatttatatttatatattagttaaaaaatacggttaaaataa 3837323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 84; Significance: 6e-40; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 6402556 - 6402667
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| || |||||||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||| ||||    
T  6402556 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaaataagtcaagtgaatagtgcacattgcaaaaattggacatgtatt 6402655  T
Q  119 ttgaaacagagg 130  Q
    ||||||| ||||    
T  6402656 ttgaaacggagg 6402667  T

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Target: chr1; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 16120586 - 16120697
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||| || ||||| ||||    
T  16120586 aacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaataatgcacattgcaaaaattggacatgtatt 16120685  T
Q  119 ttgaaacagagg 130  Q
    ||||||| ||||    
T  16120686 ttgaaacggagg 16120697  T

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Target: chr1; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 19 - 125
Target Start/End: Complemental strand, 30003649 - 30003543
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||| || ||||| ||||    
T  30003649 aacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattacaaaaattggacatgtatt 30003550  T
Q  119 ttgaaac 125  Q
    |||||||    
T  30003549 ttgaaac 30003543  T

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Target: chr1; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 19 - 124
Target Start/End: Original strand, 11641213 - 11641318
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| || |||||||||||| |||||||||| |||||||||||||||||||||||||||||| || ||||| ||||    
T  11641213 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtatt 11641312  T
Q  119 ttgaaa 124  Q
    ||||||    
T  11641313 ttgaaa 11641318  T

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Target: chr1; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 19 - 124
Target Start/End: Original strand, 36757632 - 36757737
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| || |||||||||||| |||||||||| |||||||||||||||||||||||||||||| || ||||| ||||    
T  36757632 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtatt 36757731  T
Q  119 ttgaaa 124  Q
    ||||||    
T  36757732 ttgaaa 36757737  T

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Target: chr1; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 19 - 124
Target Start/End: Original strand, 42788688 - 42788793
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||| ||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||| || ||||||||||    
T  42788688 aacatcttacatgcaaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattacaaaaattggacatatatt 42788787  T
Q  119 ttgaaa 124  Q
    ||||||    
T  42788788 ttgaaa 42788793  T

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Target: chr1; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 6766488 - 6766377
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| || |||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||  |||| ||||    
T  6766488 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattgaacatgtatt 6766389  T
Q  119 ttgaaacagagg 130  Q
    ||||||| ||||    
T  6766388 ttgaaacggagg 6766377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 15 - 130
Target Start/End: Complemental strand, 27292760 - 27292645
Alignment:
Q  15 aaataacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacata 114  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||||| ||| |||||| ||| |||||||||||||||| ||||||||| || ||||||    
T  27292760 aaataacatcttacatgctaatatttgtatttatactttagttaaaaagtatagtcaaagtaaatcaagtgaatagtgcagattgcaaaaattggacata 27292661  T
Q  115 tattttgaaacagagg 130  Q
    ||||||||||| ||||    
T  27292660 tattttgaaacggagg 27292645  T

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Target: chr1; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 30701834 - 30701723
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    ||||||||||| |||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||| || ||||| ||||    
T  30701834 aacatcttacacgctaatatttgtatttatacattagttaaaaattatggtcaaagtaagtcaagtgaatagtgcacattacaaaaattggacatgtatt 30701735  T
Q  119 ttgaaacagagg 130  Q
    ||||||| ||||    
T  30701734 ttgaaacggagg 30701723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 40771918 - 40772029
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||||||||| ||| ||||||||||||||||||||| |||| || ||||| ||||    
T  40771918 aacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaaatcaagtgaatagtgcacattgtaaaaattggacatgtatt 40772017  T
Q  119 ttgaaacagagg 130  Q
    ||||||| ||||    
T  40772018 ttgaaacggagg 40772029  T

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Target: chr1; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 9342791 - 9342897
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||  ||||||||||||| |||||||| | ||    
T  9342791 aacatcttacatgctaatatttgtatttatacattagttaaaaaatatgatcaaagtaagtcaagtgaataacgcacattgcaaaaattagacatgtttt 9342890  T
Q  119 ttgaaac 125  Q
    |||||||    
T  9342891 ttgaaac 9342897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 19 - 125
Target Start/End: Complemental strand, 36399214 - 36399108
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    ||||||||||| |||||||||||||||| ||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||| || ||||| ||||    
T  36399214 aacatcttacacgctaatatttgtatttatacattagttaaaaattatggtcaaagtaagtgaagtgaatagtgcacattgcaaaaattggacatgtatt 36399115  T
Q  119 ttgaaac 125  Q
    |||||||    
T  36399114 ttgaaac 36399108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 40977634 - 40977745
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||||||||| | ||||||||||||||| |||||||||||| || ||||| ||||    
T  40977634 aacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagttagtcaagtgaatagtacacattgcaaaaattggacatgtatt 40977733  T
Q  119 ttgaaacagagg 130  Q
    ||| ||| ||||    
T  40977734 ttgcaacggagg 40977745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 17306070 - 17305959
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| || |||| ||||||| ||| |||||| |||||||||||||||||||||||||||||| || ||||| ||||    
T  17306070 aacatcttacatgctaatatttgtatttatatattaattaaaaagtatagtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtatt 17305971  T
Q  119 ttgaaacagagg 130  Q
    || |||| ||||    
T  17305970 ttaaaacggagg 17305959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 22 - 130
Target Start/End: Complemental strand, 24321374 - 24321264
Alignment:
Q  22 atcttacatgctaatatttgtatttgtacattagttaaaaa--atatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattt 119  Q
    ||||||||||||||||||||||||| |||||||||||||||  ||||||||||| ||| |||||||||||||||||||||||||| || ||||| |||||    
T  24321374 atcttacatgctaatatttgtatttatacattagttaaaaattatatggtcaaagtaaatcaagtgaatagtgcacattgcaaaaattcgacatgtattt 24321275  T
Q  120 tgaaacagagg 130  Q
    | |||| ||||    
T  24321274 taaaacggagg 24321264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 21 - 120
Target Start/End: Complemental strand, 26910190 - 26910091
Alignment:
Q  21 catcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatttt 120  Q
    |||||| |||| |||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||| |||| ||||||    
T  26910190 catcttgcatgttaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattatacatgtatttt 26910091  T

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Target: chr1; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 52024142 - 52024031
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    ||||||||||| |||||||||| ||||| ||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||| ||  |||| ||||    
T  52024142 aacatcttacacgctaatatttatatttatacattagttaaaaattatggtcaaagtaagtgaagtgaatagtgcacattgcaaaaattgaacatgtatt 52024043  T
Q  119 ttgaaacagagg 130  Q
    ||||||| ||||    
T  52024042 ttgaaacggagg 52024031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 21 - 125
Target Start/End: Original strand, 42735313 - 42735420
Alignment:
Q  21 catcttacatgctaatatttgtatttgtacattagttaaaaaa---tatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatat 117  Q
    |||||||||||||||||||||||||| || |||||||||||||   |||||||||| |||||||||||||||||||||||||||| | ||  |||| |||    
T  42735313 catcttacatgctaatatttgtatttatatattagttaaaaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaataattgaacatgtat 42735412  T
Q  118 tttgaaac 125  Q
    ||||||||    
T  42735413 tttgaaac 42735420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 23 - 119
Target Start/End: Complemental strand, 48375114 - 48375018
Alignment:
Q  23 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattt 119  Q
    |||||||||||||||||||||||| || ||||||||||||||||| ||||||||||| ||||||||| || ||||||||||| ||  ||||||||||    
T  48375114 tcttacatgctaatatttgtatttataaattagttaaaaaatatgatcaaaataagttaagtgaataatgtacattgcaaaaattgaacatatattt 48375018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 15912482 - 15912594
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    ||||||||||||||||||||||||||||  | || | | ||||| |||||||||| ||||||||||||||||||||||||| |||| || ||||| ||||    
T  15912482 aacatcttacatgctaatatttgtatttaaaaataaataaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgtaaaaattggacatgtatt 15912581  T
Q  119 ttgaaacagagga 131  Q
    |||| ||| ||||    
T  15912582 ttgagacatagga 15912594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 4302234 - 4302149
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaa 104  Q
    |||||||||||||||||||||| ||||| |||||||||||||||| ||  ||||| |||||||||| ||||||| |||||||||||    
T  4302234 aacatcttacatgctaatatttatatttatacattagttaaaaaacattatcaaagtaagtcaagtaaatagtgtacattgcaaaa 4302149  T

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Target: chr1; HSP #22
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 22 - 125
Target Start/End: Original strand, 28030830 - 28030933
Alignment:
Q  22 atcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttg 121  Q
    |||||||||||||| |||||||||| ||  ||||||||||| |||||||||||||||||| || |||| |||||||||||||| |   |||| |||||||    
T  28030830 atcttacatgctaacatttgtatttatatgttagttaaaaagtatggtcaaaataagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttg 28030929  T
Q  122 aaac 125  Q
    ||||    
T  28030930 aaac 28030933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 42367438 - 42367513
Alignment:
Q  15 aaataacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatag 90  Q
    ||||||||||||||||| || ||||||||||| ||||||||||||||| |||| ||||| ||||||||||||||||    
T  42367438 aaataacatcttacatgttagtatttgtatttatacattagttaaaaattatgatcaaagtaagtcaagtgaatag 42367513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 104
Target Start/End: Original strand, 44647859 - 44647944
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaa 104  Q
    ||||||||||||||||| |||||||||| || ||| ||||||||||||| ||||||||||||| ||||||| | ||||||| ||||    
T  44647859 aacatcttacatgctaacatttgtatttatatatttgttaaaaaatatgatcaaaataagtcatgtgaataatacacattgaaaaa 44647944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 19 - 98
Target Start/End: Original strand, 30385291 - 30385370
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacatt 98  Q
    |||||||||||| |||| |||||||||| || ||||||||||||||||||||||| |||   | ||||||||||||||||    
T  30385291 aacatcttacatactaacatttgtatttatatattagttaaaaaatatggtcaaagtaaactatgtgaatagtgcacatt 30385370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 15382572 - 15382678
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||| ||||||||||||||| || |||| ||||||||  |||||| | ||||| | |||||||||| |||||| |||| |  ||||| ||||    
T  15382572 aacatcttacatactaatatttgtatttatatattatttaaaaaaattggtcagagtaagttatgtgaatagtgtacattgtaaaattgcgacatgtatt 15382671  T
Q  119 ttgaaac 125  Q
    |||||||    
T  15382672 ttgaaac 15382678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 124
Target Start/End: Original strand, 40800533 - 40800638
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaa-aatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatat 117  Q
    ||||||||||||||||| |||||||||  || ||||||||||| |||||||||||| ||||| | |||| || ||||||||| |||| |  |||||||||    
T  40800533 aacatcttacatgctaacatttgtatta-tatattagttaaaaaaatatggtcaaagtaagttatgtgattaatgcacattgtaaaattacgacatatat 40800631  T
Q  118 tttgaaa 124  Q
    |||||||    
T  40800632 tttgaaa 40800638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 19 - 124
Target Start/End: Original strand, 38153423 - 38153528
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    ||||||||||||| ||| |||||||||| ||  ||||||||||| |||||| | | ||||||| ||||||||||||||||  |||| |  ||||| ||||    
T  38153423 aacatcttacatgataacatttgtatttatatgttagttaaaaagtatggtaacagtaagtcatgtgaatagtgcacattataaaaatgcgacatgtatt 38153522  T
Q  119 ttgaaa 124  Q
    ||||||    
T  38153523 ttgaaa 38153528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 126
Target Start/End: Original strand, 3485353 - 3485460
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||| |||||||| ||| |||||||||| || ||||||||||||||||| ||||| ||||| | | |||||||||| |||| |||| |  ||||| ||||    
T  3485353 aacaccttacatgataacatttgtatttatatattagttaaaaaatatgatcaaagtaagttatgcgaatagtgcatattgtaaaattacgacatgtatt 3485452  T
Q  119 ttgaaaca 126  Q
    || |||||    
T  3485453 ttaaaaca 3485460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 22575733 - 22575781
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatg 67  Q
    ||||||||||||||||| |||||||||| || |||||||||||||||||    
T  22575733 aacatcttacatgctaacatttgtatttatatattagttaaaaaatatg 22575781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 103
Target Start/End: Complemental strand, 34635019 - 34634939
Alignment:
Q  23 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaa 103  Q
    ||||||||| ||| |||||||||| || ||||||||||||||||  ||||||||||| | ||||| | | |||||||||||    
T  34635019 tcttacatgttaacatttgtatttatatattagttaaaaaatattatcaaaataagttatgtgaaaacttcacattgcaaa 34634939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 44644510 - 44644586
Alignment:
Q  28 catgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaa 104  Q
    |||||||| |||||||||| || ||| ||||||||||||| ||||| ||||||| ||||||| | ||||||| ||||    
T  44644510 catgctaacatttgtatttatatatttgttaaaaaatatgatcaaagtaagtcatgtgaataatacacattgaaaaa 44644586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 27984671 - 27984597
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgca 94  Q
    ||||||||||| ||||| ||||||||| ||| |||||||| |||||||||||||| ||||  | ||||||||||||    
T  27984671 aacatcttacaagctaacatttgtattcgtatattagtta-aaaatatggtcaaagtaagcaatgtgaatagtgca 27984597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 31445039 - 31444986
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaa 72  Q
    |||||||||||||| || |||||| ||| || ||||||||||||||||||||||    
T  31445039 aacatcttacatgcaaacatttgtgtttatatattagttaaaaaatatggtcaa 31444986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 89
Target Start/End: Complemental strand, 9881392 - 9881322
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaata 89  Q
    ||||||||||||| ||| |||| ||| | || |||||||||||| |||||| ||||||||| | |||||||    
T  9881392 aacatcttacatgataacatttatatgtatatattagttaaaaattatggttaaaataagttatgtgaata 9881322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 97
Target Start/End: Complemental strand, 16689920 - 16689862
Alignment:
Q  39 ttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacat 97  Q
    |||||||| || |||||||| |||||||| ||||| ||||| | |||||||||||||||    
T  16689920 ttgtatttatatattagttagaaaatatgatcaaagtaagttatgtgaatagtgcacat 16689862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 125
Target Start/End: Complemental strand, 25170955 - 25170889
Alignment:
Q  57 taaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttgaaac 125  Q
    ||||||||||||||||| ||||||||  ||||||||| |||| || || |||||||| |||||| ||||    
T  25170955 taaaaaatatggtcaaagtaagtcaa--gaatagtgcgcattacagaaattagacatgtattttaaaac 25170889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 130
Target Start/End: Original strand, 19711840 - 19711945
Alignment:
Q  21 catcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatttt 120  Q
    ||||||||||||||  | |||||||| ||  ||||||||||||||| || |    |||||| || |||||||||| |||||||| |  || || ||||||    
T  19711840 catcttacatgctatcacttgtatttatatgttagttaaaaaatatagtta----aagtcacgtaaatagtgcacgttgcaaaaatgcgatatgtatttt 19711935  T
Q  121 gaaacagagg 130  Q
    ||||||||||    
T  19711936 gaaacagagg 19711945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 83; Significance: 2e-39; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 25296726 - 25296832
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||| || ||||    
T  25296726 aacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattagatatgtatt 25296825  T
Q  119 ttgaaac 125  Q
    |||||||    
T  25296826 ttgaaac 25296832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 44232223 - 44232329
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| || |||||||||||| |||||||||| |||||||||||||||||||||||||||||| |||||||| ||||    
T  44232223 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattagacatgtatt 44232322  T
Q  119 ttgaaac 125  Q
    |||||||    
T  44232323 ttgaaac 44232329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 2760873 - 2760984
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||| |||| || ||||| ||||    
T  2760873 aacatcttacatgctaatatttgtatttatatattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattgtaaaaattggacatgtatt 2760972  T
Q  119 ttgaaacagagg 130  Q
    ||||||| ||||    
T  2760973 ttgaaacggagg 2760984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 26170102 - 26169991
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||||||||| ||| |||||||||||||||||||||||||| || ||||| ||||    
T  26170102 aacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaaatcaagtgaatagtgcacattgcaaaaattggacatgtatt 26170003  T
Q  119 ttgaaacagagg 130  Q
    ||||||| ||||    
T  26170002 ttgaaacggagg 26169991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 38416796 - 38416907
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| || |||||||||||| |||||||||| |||||||||||||||||||||||||||||| || ||||| ||||    
T  38416796 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtatt 38416895  T
Q  119 ttgaaacagagg 130  Q
    ||||||| ||||    
T  38416896 ttgaaacggagg 38416907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 47386432 - 47386543
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||  | ||||| ||||    
T  47386432 aacatcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattccaaaaagtggacatgtatt 47386531  T
Q  119 ttgaaacagagg 130  Q
    ||||||| ||||    
T  47386532 ttgaaacggagg 47386543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 19 - 128
Target Start/End: Original strand, 12240324 - 12240433
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||| |||||||||||||||| |||| || ||||| ||||    
T  12240324 aacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacattgtaaaaattggacatgtatt 12240423  T
Q  119 ttgaaacaga 128  Q
    ||||||||||    
T  12240424 ttgaaacaga 12240433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 17610396 - 17610285
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||| || ||||| ||||    
T  17610396 aacatcttacatgctaatatttgtatttatacattagctaaaaaatatggtcaaagtaagtcaagtgaatagtgcatattgcaaaaattggacatgtatt 17610297  T
Q  119 ttgaaacagagg 130  Q
    || |||| ||||    
T  17610296 ttaaaacggagg 17610285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 35686489 - 35686378
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    ||||||||||||| |||||||||||||| ||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||| || ||||| ||||    
T  35686489 aacatcttacatgataatatttgtatttatacattagttaaaaagtatggtcaaagtaagttaagtgaatagtgcacattgcaaaaattggacatgtatt 35686390  T
Q  119 ttgaaacagagg 130  Q
    ||||||| ||||    
T  35686389 ttgaaactgagg 35686378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 38717002 - 38716892
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||| | ||||||||||||||||||| || ||||| ||||    
T  38717002 aacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaa-ttaatagtgcacattgcaaaaattggacatgtatt 38716904  T
Q  119 ttgaaacagagg 130  Q
    ||||||||||||    
T  38716903 ttgaaacagagg 38716892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 10 - 130
Target Start/End: Original strand, 35381031 - 35381151
Alignment:
Q  10 agatgaaataacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttag 109  Q
    |||| ||| |||||||||||||||||||||||||||| || |||||||||||| |||||||||| |||||||| |||||||||||||||| |||| || |    
T  35381031 agatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacattgtaaaaattgg 35381130  T
Q  110 acatatattttgaaacagagg 130  Q
    |||| ||||||||||| ||||    
T  35381131 acatgtattttgaaacggagg 35381151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 29830459 - 29830348
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| || |||||||||||| |||||||||| ||||||||||||||||||||||||  |||| || ||||| ||||    
T  29830459 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattaaaaaaattggacatgtatt 29830360  T
Q  119 ttgaaacagagg 130  Q
    ||||||| ||||    
T  29830359 ttgaaacggagg 29830348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 54330836 - 54330947
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| || |||||||||||| |||||||||| |||||||||||||||| ||||||||||||| || ||||| ||||    
T  54330836 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagcgcacattgcaaaaattggacatgtatt 54330935  T
Q  119 ttgaaacagagg 130  Q
    | ||||| ||||    
T  54330936 tcgaaacggagg 54330947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 55209720 - 55209831
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| || |||||||||||| |||||||||| ||| ||||||||||||||||||||| |||| || ||||| ||||    
T  55209720 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaaatcaagtgaatagtgcacattggaaaaattggacatgtatt 55209819  T
Q  119 ttgaaacagagg 130  Q
    ||||||| ||||    
T  55209820 ttgaaacggagg 55209831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 125
Target Start/End: Complemental strand, 43967839 - 43967733
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| || |||||||||||| |||||||||| |||||||||| ||||||||||||||||||| ||  |||| ||||    
T  43967839 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagttaatagtgcacattgcaaaaattgaacatgtatt 43967740  T
Q  119 ttgaaac 125  Q
    |||||||    
T  43967739 ttgaaac 43967733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 26125824 - 26125713
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||| |||| |||| ||  |  ||||||    
T  26125824 aacatcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaataatgcatattgtaaaaattgaatttatatt 26125725  T
Q  119 ttgaaacagagg 130  Q
    ||||||| ||||    
T  26125724 ttgaaacggagg 26125713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 19 - 125
Target Start/End: Complemental strand, 12625367 - 12625261
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||  ||||||||||| ||||||||| ||  |||| ||||    
T  12625367 aacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcagatgaatagtgcatattgcaaaaattgaacatgtatt 12625268  T
Q  119 ttgaaac 125  Q
    |||||||    
T  12625267 ttgaaac 12625261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 19433504 - 19433619
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaa----atatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacata 114  Q
    |||||||||||||||||||||||||||| |||| ||||||||||    ||||||||||| ||||||||||||| |||||||||||||||| ||  ||||     
T  19433504 aacatcttacatgctaatatttgtatttatacaatagttaaaaagtatatatggtcaaagtaagtcaagtgaaaagtgcacattgcaaaaattgaacatg 19433603  T
Q  115 tattttgaaacagagg 130  Q
    ||||||||||||||||    
T  19433604 tattttgaaacagagg 19433619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 19 - 125
Target Start/End: Complemental strand, 25918319 - 25918213
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||| ||||| |||||| |||||||| || ||||||||||| |||||||||||||||||||||||||| || ||||| ||||    
T  25918319 aacatcttacatgctaatatttatatttatacattggttaaaaagtagggtcaaaataattcaagtgaatagtgcacattgcaaaaattggacatgtatt 25918220  T
Q  119 ttgaaac 125  Q
    || ||||    
T  25918219 ttaaaac 25918213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 28 - 138
Target Start/End: Complemental strand, 55800941 - 55800831
Alignment:
Q  28 catgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttgaaacag 127  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||  | || ||| ||||||| |    
T  55800941 catgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattgaagatgtatattgaaacgg 55800842  T
Q  128 aggaaataata 138  Q
    ||| |||||||    
T  55800841 agggaataata 55800831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 22 - 130
Target Start/End: Complemental strand, 31010327 - 31010219
Alignment:
Q  22 atcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttg 121  Q
    ||||||||||||||||||| ||||| ||||||||||||||| |||||||||| |||||||| ||||||||||||||| ||||| || || || |||||||    
T  31010327 atcttacatgctaatatttttatttatacattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacattacaaaaattggatatgtattttg 31010228  T
Q  122 aaacagagg 130  Q
    |||| ||||    
T  31010227 aaaccgagg 31010219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 50620828 - 50620934
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    ||||||||||||||||||||| |||||| ||||||||||||||  |||||||||| ||||| |||||||||||||| ||||| ||| || ||||||||||    
T  50620828 aacatcttacatgctaatattagtatttatacattagttaaaatgtatggtcaaagtaagttaagtgaatagtgcatattgctaaaattggacatatatt 50620927  T
Q  119 ttgaaac 125  Q
    || ||||    
T  50620928 ttaaaac 50620934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 17446779 - 17446880
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    ||||||||||||| |||||||||||||| ||||||||||||||  |||||||||| | |||||| |||||||||||||||| |||| || ||||||||||    
T  17446779 aacatcttacatgttaatatttgtatttatacattagttaaaatgtatggtcaaagttagtcaaatgaatagtgcacattgtaaaaattggacatatatt 17446878  T
Q  119 tt 120  Q
    ||    
T  17446879 tt 17446880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 45291948 - 45291863
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaa 104  Q
    |||||||||||||||||||||||||||| || |||||||||||| |||| ||||| ||||||||||||||||||||||||| ||||    
T  45291948 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatgatcaaagtaagtcaagtgaatagtgcacattggaaaa 45291863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 15 - 130
Target Start/End: Complemental strand, 3037100 - 3036985
Alignment:
Q  15 aaataacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacata 114  Q
    |||||| || |||||||||||||||||||||| || |||||||||||| |||||||||| ||||||| ||||||||| ||||||| | || |  |||||     
T  3037100 aaataatattttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcatgtgaatagtacacattgtataattacgacatg 3037001  T
Q  115 tattttgaaacagagg 130  Q
    ||||||||||||||||    
T  3037000 tattttgaaacagagg 3036985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 125
Target Start/End: Complemental strand, 54610979 - 54610872
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaat-agtgcacattgcaaaagttagacatatat 117  Q
    |||||||||||| ||||||| ||||||| ||||||| |||||||||||| | ||| |||||||||||||| |||| ||||||||||| ||| ||||||||    
T  54610979 aacatcttacatactaatatctgtatttatacattaattaaaaaatatgattaaagtaagtcaagtgaataagtgtacattgcaaaaattaaacatatat 54610880  T
Q  118 tttgaaac 125  Q
    ||||||||    
T  54610879 tttgaaac 54610872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 55191940 - 55191829
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    ||||| || |||||||||||||||||||  |||||| ||||||| ||| |||||| |||||||| ||||||||||||||||||||| ||  |||||||||    
T  55191940 aacattttgcatgctaatatttgtatttacacattaattaaaaagtatagtcaaagtaagtcaaatgaatagtgcacattgcaaaaattgaacatatatt 55191841  T
Q  119 ttgaaacagagg 130  Q
    ||||||| ||||    
T  55191840 ttgaaacggagg 55191829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 19 - 125
Target Start/End: Complemental strand, 50205859 - 50205753
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    ||||||||||  |||||||||||||||| || |||||||||||| |||||||||| |||||||| ||||||||||||||| |||||  | ||||| ||||    
T  50205859 aacatcttacgagctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacattacaaaaacttgacatgtatt 50205760  T
Q  119 ttgaaac 125  Q
    |||||||    
T  50205759 ttgaaac 50205753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 36523114 - 36523220
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    ||||||||||||| ||| |||||||||| || |||||||||||| ||| |||||| ||||||| || ||||||||| ||||||||| |  ||||||||||    
T  36523114 aacatcttacatgttaacatttgtatttatatattagttaaaaagtatagtcaaagtaagtcatgtaaatagtgcatattgcaaaaatgcgacatatatt 36523213  T
Q  119 ttgaaac 125  Q
    |||||||    
T  36523214 ttgaaac 36523220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 19 - 98
Target Start/End: Original strand, 4467665 - 4467744
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacatt 98  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||  ||||||||| |||| ||||||||    
T  4467665 aacatcttacatgctaatatttgtatttatacattagttaaaaagtatagtcaaagcaagtcaagtaaataatgcacatt 4467744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 7614731 - 7614664
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtga 86  Q
    ||||||||||||||||| |||||||||| || ||||||||||||||||||||||||||||||| ||||    
T  7614731 aacatcttacatgctaacatttgtatttatatattagttaaaaaatatggtcaaaataagtcatgtga 7614664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 25 - 104
Target Start/End: Complemental strand, 19595815 - 19595736
Alignment:
Q  25 ttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaa 104  Q
    |||||||||||||||||||||| ||||||||||||| | |||||| ||| |||||||||||||||||||| |||| ||||    
T  19595815 ttacatgctaatatttgtatttatacattagttaaagagtatggttaaagtaagtcaagtgaatagtgcatattgtaaaa 19595736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 2571031 - 2571133
Alignment:
Q  22 atcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttg 121  Q
    |||||||||||||| |||||||||| || |||||||||||||||| |||||||||| ||| ||||||| ||||||||  |||| |  ||||| |||||||    
T  2571031 atcttacatgctaacatttgtatttatatattagttaaaaaatatagtcaaaataaatcatgtgaataatgcacattataaaaatgtgacatgtattttg 2571130  T
Q  122 aaa 124  Q
    |||    
T  2571131 aaa 2571133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 9029598 - 9029680
Alignment:
Q  22 atcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaa 104  Q
    ||||||| ||||||||||||||||| ||||||||||||||| |||||||||| ||||| |||| |||||| || |||||||||    
T  9029598 atcttacgtgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagttaagtaaatagtacagattgcaaaa 9029680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 38721453 - 38721368
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaa 104  Q
    ||||||||||||||||| |||||||||| || ||| ||||||||||||| ||||||||||||| ||||||| | ||||||| ||||    
T  38721453 aacatcttacatgctaacatttgtatttatatatttgttaaaaaatatgatcaaaataagtcatgtgaataatacacattgaaaaa 38721368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 27 - 104
Target Start/End: Original strand, 27407773 - 27407850
Alignment:
Q  27 acatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaa 104  Q
    |||||||||||||||||||| || |||||||||||| || ||||||| ||||| | ||||||||| |||| |||||||    
T  27407773 acatgctaatatttgtatttatatattagttaaaaagtagggtcaaagtaagttatgtgaatagttcacactgcaaaa 27407850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 14144603 - 14144663
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagt 79  Q
    |||||||||||| ||||||||||||||| || |||||||||||||| |||||||| |||||    
T  14144603 aacatcttacatactaatatttgtatttatatattagttaaaaaatgtggtcaaagtaagt 14144663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 125
Target Start/End: Complemental strand, 5428661 - 5428588
Alignment:
Q  52 ttagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttgaaac 125  Q
    ||||||||||| |||||||||  ||||||| |||||||||||||||||| ||| |  ||||| |||||||||||    
T  5428661 ttagttaaaaagtatggtcaacgtaagtcatgtgaatagtgcacattgccaaaatgcgacatgtattttgaaac 5428588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 104
Target Start/End: Original strand, 32871505 - 32871590
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaa 104  Q
    |||||| ||||| || | ||||||||||  | ||||||||||||||||| |||||| ||||||||||||||| ||| ||| |||||    
T  32871505 aacatcctacatacttacatttgtatttacatattagttaaaaaatatgatcaaaacaagtcaagtgaatagagcatattacaaaa 32871590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 50181173 - 50181128
Alignment:
Q  22 atcttacatgctaatatttgtatttgtacattagttaaaaaatatg 67  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||    
T  50181173 atcttacatgctaatatttgtatttatacattaattaaaaaatatg 50181128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 104
Target Start/End: Original strand, 56297848 - 56297933
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaa 104  Q
    ||||| ||| ||||||| |||||||||| || ||||||||| |||||||||||||| |||| | ||||||| || |||||| ||||    
T  56297848 aacattttatatgctaacatttgtatttatatattagttaataaatatggtcaaaacaagttatgtgaataatgtacattgtaaaa 56297933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 97
Target Start/End: Original strand, 19903799 - 19903874
Alignment:
Q  22 atcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacat 97  Q
    |||| ||||||||| |||||||||| || ||||||||||| ||||||||||| ||| | | |||||| ||||||||    
T  19903799 atctcacatgctaacatttgtatttatatattagttaaaatatatggtcaaagtaaattatgtgaatcgtgcacat 19903874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 125
Target Start/End: Original strand, 34652208 - 34652299
Alignment:
Q  34 aatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttgaaac 125  Q
    ||||||||||||| ||  ||||||||||||||||||| || ||||||  || |||||| |||||| ||||| |  ||||| |||||||||||    
T  34652208 aatatttgtatttatatgttagttaaaaaatatggtcgaagtaagtcgtgtaaatagtacacattacaaaaatgtgacatgtattttgaaac 34652299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 10550542 - 10550429
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaa--aaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatata 116  Q
    ||||||||||||||||| |||| ||||| || |||||||||  |||||||||| ||| |||  || |||||||||||| |||| |||| |   ||| |||    
T  10550542 aacatcttacatgctaacatttttatttatatattagttaaaaaaaatatggttaaagtaaaccatgtgaatagtgcatattgtaaaattgcaacagata 10550443  T
Q  117 ttttgaaacagagg 130  Q
    |||| |||||||||    
T  10550442 ttttaaaacagagg 10550429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 124
Target Start/End: Complemental strand, 23360291 - 23360189
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||| ||| ||| || |||||||||  || ||||||||||||||| ||||||| |||||||  ||||||||||| ||||||||| |  ||||| ||||    
T  23360291 aacatcatacttgccaacatttgtattcatatattagttaaaaaata-ggtcaaagtaagtca--tgaatagtgcatattgcaaaaatgcgacatgtatt 23360195  T
Q  119 ttgaaa 124  Q
    ||||||    
T  23360194 ttgaaa 23360189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 135
Target Start/End: Complemental strand, 25101826 - 25101720
Alignment:
Q  29 atgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttgaaacaga 128  Q
    ||||||||||||| |||| ||  ||||||||||| |||||||||||||| |||  | |||| | |||||||||||| |   |||| |||||||||| |||    
T  25101826 atgctaatatttgaatttatatgttagttaaaaagtatggtcaaaataaatcatataaataatacacattgcaaaaatgcaacatgtattttgaaataga 25101727  T
Q  129 ggaaata 135  Q
    || ||||    
T  25101726 gggaata 25101720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 89
Target Start/End: Complemental strand, 29051793 - 29051730
Alignment:
Q  24 cttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaata 89  Q
    |||||||||||||  |||||||| || ||||||||||||||||||||||| ||||| | |||||||    
T  29051793 cttacatgctaat--ttgtatttatatattagttaaaaaatatggtcaaagtaagttatgtgaata 29051730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 125
Target Start/End: Complemental strand, 39307812 - 39307706
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    ||||| |||||| |||| |||||||||| || |||||||||||| ||   ||||| ||||||| |||||||| | | ||||||||| |  ||||| ||||    
T  39307812 aacattttacatactaacatttgtatttatatattagttaaaaagtagcatcaaagtaagtcatgtgaatagggtatattgcaaaaatgcgacatgtatt 39307713  T
Q  119 ttgaaac 125  Q
    |||||||    
T  39307712 ttgaaac 39307706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 53304535 - 53304481
Alignment:
Q  25 ttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagt 79  Q
    |||||||||||||||| |||||||| ||||||| ||||||||| ||||| |||||    
T  53304535 ttacatgctaatatttatatttgtatattagtttaaaaatatgatcaaagtaagt 53304481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 128
Target Start/End: Original strand, 20875393 - 20875502
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    ||||||||| |||| || ||||  |||| || ||||||||||||||||||||||| ||| | |  |||||||||||||||  |||| |   |||| ||||    
T  20875393 aacatcttatatgcaaacatttacatttatatattagttaaaaaatatggtcaaagtaaattatatgaatagtgcacattttaaaattacaacatgtatt 20875492  T
Q  119 ttgaaacaga 128  Q
    ||||||||||    
T  20875493 ttgaaacaga 20875502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 120
Target Start/End: Complemental strand, 34316636 - 34316536
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    ||||||||| ||||||| |||||||||| || ||||||||| || |||| ||||| |||||||  | ||||||||||| || |||| |  ||||||||||    
T  34316636 aacatcttatatgctaacatttgtatttatatattagttaacaa-tatgatcaaagtaagtcatataaatagtgcacactgtaaaaatacgacatatatt 34316538  T
Q  119 tt 120  Q
    ||    
T  34316537 tt 34316536  T

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Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 55631824 - 55631883
Alignment:
Q  20 acatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagt 79  Q
    |||||||| ||| || ||||| | |||||| |||||| ||||||||||||||||||||||    
T  55631824 acatcttatatgatattatttatctttgtatattagtaaaaaaatatggtcaaaataagt 55631883  T

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Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 99
Target Start/End: Original strand, 10181149 - 10181213
Alignment:
Q  35 atatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattg 99  Q
    |||||| | |||||| ||||||  |||||| ||||||||||| || |||| ||||||||||||||    
T  10181149 atatttatctttgtatattagtagaaaaatgtggtcaaaatatgttaagtcaatagtgcacattg 10181213  T

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Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 34652157 - 34652189
Alignment:
Q  14 gaaataacatcttacatgctaatatttgtattt 46  Q
    |||| ||||||||||||||||||||||||||||    
T  34652157 gaaacaacatcttacatgctaatatttgtattt 34652189  T

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Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 55091333 - 55091381
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatg 67  Q
    |||||||||||| |||| |||||||||| || |||| ||||||||||||    
T  55091333 aacatcttacatactaacatttgtatttatatattaattaaaaaatatg 55091381  T

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Target: scaffold0022 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 100793 - 100904
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    ||||||||||| |||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||  |||| ||||    
T  100793 aacatcttacacgctaatatttgtatttatacattagttaaaaattatggtcaaagtaagtcaagtgaatagtgcacattgcaaaagttgaacatgtatt 100892  T
Q  119 ttgaaacagagg 130  Q
    ||||||| ||||    
T  100893 ttgaaacggagg 100904  T

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Target: scaffold0003 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 161983 - 162094
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||||||||  |||||||||||||||||||||||| ||||| |||||||| ||||    
T  161983 aacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaatgtaagtcaagtgaatagtgcacattacaaaaattagacatgtatt 162082  T
Q  119 ttgaaacagagg 130  Q
    ||||||| ||||    
T  162083 ttgaaacggagg 162094  T

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Target: scaffold0056 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 19 - 124
Target Start/End: Complemental strand, 71076 - 70972
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    ||||||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| || ||||| ||||    
T  71076 aacatcttaaatgctaatatttgtatttatacattagttaaaaa-tatggtcaaaataagtcaagtgaatagtgcatattgcaaaaattggacatgtatt 70978  T
Q  119 ttgaaa 124  Q
    ||||||    
T  70977 ttgaaa 70972  T

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Target: scaffold0295 (Bit Score: 72; Significance: 8e-33; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 13863 - 13974
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    |||||||||||||||||||||| ||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||  |||||||| ||||    
T  13863 aacatcttacatgctaatatttatatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattacaaatattagacatgtatt 13962  T
Q  119 ttgaaacagagg 130  Q
    || |||| ||||    
T  13963 ttaaaacggagg 13974  T

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Target: scaffold0295; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 75 - 130
Target Start/End: Complemental strand, 9432 - 9377
Alignment:
Q  75 taagtcaagtgaatagtgcacattgcaaaagttagacatatattttgaaacagagg 130  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||    
T  9432 taagtcaagtgaatagtgcacattgcaaaaattagacatgtattttgaaacggagg 9377  T

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Target: scaffold0018 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 67915 - 68021
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 118  Q
    ||||||||||||| |||||||||||||| ||||||||||||||| |||||||||| |||||||| ||||||||||||||| ||||| || ||||| ||||    
T  67915 aacatcttacatgttaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacatttcaaaaattggacatgtatt 68014  T
Q  119 ttgaaac 125  Q
    |||||||    
T  68015 ttgaaac 68021  T

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Target: scaffold0099 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 19 - 104
Target Start/End: Original strand, 28798 - 28884
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatag-tgcacattgcaaaa 104  Q
    ||||||||| |||||||||||||||||| || ||||||||||||||||||||||| ||||  | |||||||| ||||||||| ||||    
T  28798 aacatcttatatgctaatatttgtatttataaattagttaaaaaatatggtcaaagtaagctatgtgaatagttgcacattgtaaaa 28884  T

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Target: scaffold0262 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 22896 - 22811
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaa 104  Q
    ||||||||||||||||| |||||||||| || || ||||||||||| |||||||||||||| | ||||||| |||| |||| ||||    
T  22896 aacatcttacatgctaacatttgtatttatatatgagttaaaaaatgtggtcaaaataagttatgtgaataatgcatattgtaaaa 22811  T

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Target: scaffold0225 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 104
Target Start/End: Original strand, 8979 - 9064
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaa 104  Q
    ||||||||||||||||| |||||||||| || |||||||||||||| |||||||| ||||| | ||||||| |||| |||| ||||    
T  8979 aacatcttacatgctaacatttgtatttatatattagttaaaaaatgtggtcaaagtaagttatgtgaataatgcatattgtaaaa 9064  T

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Target: scaffold0029 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 104
Target Start/End: Original strand, 138176 - 138261
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaa 104  Q
    ||||||||||||||||| |||||||||| || |||||||||||||| |||||||| ||||| | ||||||| |||| |||| ||||    
T  138176 aacatcttacatgctaacatttgtatttatatattagttaaaaaatgtggtcaaagtaagttatgtgaataatgcatattgtaaaa 138261  T

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Target: scaffold0595 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0595
Description:

Target: scaffold0595; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 22 - 93
Target Start/End: Complemental strand, 4061 - 3990
Alignment:
Q  22 atcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgc 93  Q
    |||||||||||||| |||||||||| || ||||||||||||||||||||||| ||||  | |||||||||||    
T  4061 atcttacatgctaacatttgtatttatatattagttaaaaaatatggtcaaagtaagctatgtgaatagtgc 3990  T

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Target: scaffold0608 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 1633 - 1588
Alignment:
Q  22 atcttacatgctaatatttgtatttgtacattagttaaaaaatatg 67  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||    
T  1633 atcttacatgctaatatttgtatttatacattaattaaaaaatatg 1588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 217021 - 217128
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaa-aatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatat 117  Q
    ||||||||| ||||||| |||||||||| || |||| |||||| ||||||||||| |||||| | | ||||| ||||||||| |||| |  ||| | |||    
T  217021 aacatcttatatgctaacatttgtatttatatattacttaaaaaaatatggtcaacataagttatgagaatattgcacattgtaaaattgcgacttgtat 217120  T
Q  118 tttgaaac 125  Q
    ||||||||    
T  217121 tttgaaac 217128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 53566 - 53620
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaa 73  Q
    |||||||| |||||||| ||||||| || || ||||||||||||||||| |||||    
T  53566 aacatcttgcatgctaaaatttgtaattatatattagttaaaaaatatgatcaaa 53620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 36463 - 36543
Alignment:
Q  19 aacatcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattg 99  Q
    ||||||||| ||| |||||||| | |||||| |||| ||||||||||| || |||||| |||| || || |||||||||||    
T  36463 aacatcttatatgataatatttatctttgtatattaattaaaaaatatagttaaaatatgtcaggtcaaaagtgcacattg 36543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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