View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2364_low_11 (Length: 238)
Name: NF2364_low_11
Description: NF2364
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2364_low_11 |
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Alignment Details
Target: chr2 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 2252405 - 2252627
Alignment:
| Q |
1 |
caatttcaacttcctttttcgctaactacaacaattccaatctgtaacagttagttaagctcgcgcgtttt--tctttttgatttctgaagatggggaag |
98 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||||||| |
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| T |
2252405 |
caatttcaacttcctttttcgctaactacaacaattccaatctgtaacagttagttaagctcgcgcgttttatttttttttatttctgaagatggggaag |
2252504 |
T |
|
| Q |
99 |
aagcgtgtaatggtgccggcgaaggacgtagatttgtcttcaatcaaatacgaacctgaaattgttcaaggttattcattcattccactaactttaattg |
198 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2252505 |
aagcgtgtaatggtgccggcgaaggacgtagatttgtcttcaatcaaatacgaacctgaaattgttcaaggttattcattcattccactaactttaattg |
2252604 |
T |
|
| Q |
199 |
cttcttctttcgttaaccaattt |
221 |
Q |
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||||||||||||||||||||||| |
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|
| T |
2252605 |
cttcttctttcgttaaccaattt |
2252627 |
T |
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