View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2365_low_10 (Length: 375)
Name: NF2365_low_10
Description: NF2365
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2365_low_10 |
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Alignment Details
Target: chr6 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 56 - 359
Target Start/End: Original strand, 34883324 - 34883632
Alignment:
| Q |
56 |
ctactgttaccttgttttactacctacaaaatctagtctagtctatctaggaacatagtaatacttgtcaccgttggattttccttagacaaggatcatt |
155 |
Q |
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| T |
34883324 |
ctactgttaccttgttttgctacctacaaaatctagtctagtctatctaggaacatagtaatact-gtcaccgttggattttccttagacaaggatcatt |
34883422 |
T |
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| Q |
156 |
catgactgagtttgtgatttacatgcatattacgtggcttcttatcctctttccatctcattgttgttta------acttccatacatatattgctattt |
249 |
Q |
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||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| |
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| T |
34883423 |
catgagtgagtttgtgatttacatgcatattacgtggcttcttatcctctttccatctcattgttgtttaatttccaattccatacatatattgctattt |
34883522 |
T |
|
| Q |
250 |
tcacccctcacttttcctaatcattaatagagtaacacaaatagcatccgttttaacgtattctttctaaaatttactttttcattagataaaatatata |
349 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||| |
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| T |
34883523 |
tcacccctcacttttcctaatcattaatagagtaacacaaatagcatccattttaacgtattctttctcaaatttactttttcattagataaaacatata |
34883622 |
T |
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| Q |
350 |
tgggtcttac |
359 |
Q |
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|||||||||| |
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| T |
34883623 |
tgggtcttac |
34883632 |
T |
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