View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2365_low_13 (Length: 289)
Name: NF2365_low_13
Description: NF2365
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2365_low_13 |
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Alignment Details
Target: chr5 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 15 - 275
Target Start/End: Complemental strand, 29559051 - 29558791
Alignment:
| Q |
15 |
attattctatccaacaagacatcttttataaaggacaaaatcgtaaggatttatacaagacccaatggagacagtagcttcgctcataaatgtagtgctt |
114 |
Q |
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| T |
29559051 |
attattctatccatcaagacatcatttataaagggcaaaatcgtaaggatttacacaagacccaaaggagacagtagtttggctcataaatgtagtgttg |
29558952 |
T |
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| Q |
115 |
caagcttgaagtcggcaaatggtctaccaagtagaagtcaaatatatttcatacgcttcatagcttacaaacactctagtcccttaaattcgatcagtag |
214 |
Q |
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| T |
29558951 |
cgagcttgaggtcggaaaatggtctaccaagtagaagtcaaacatatttcatacgcttcatagcttacaaacactctagtcccttagattcgatcagtag |
29558852 |
T |
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| Q |
215 |
ttattgttccgctagaccaaaactttaagtctcatattgtttaaaaattaaatgtaaatat |
275 |
Q |
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| T |
29558851 |
ttattgttccgctagaccaaaactttaagtctcatattgtttaaaaattaaatgtaaatat |
29558791 |
T |
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