View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2365_low_16 (Length: 261)
Name: NF2365_low_16
Description: NF2365
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2365_low_16 |
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Alignment Details
Target: chr3 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 14 - 245
Target Start/End: Complemental strand, 33252443 - 33252214
Alignment:
| Q |
14 |
aagaatatgattcccaatacctttcattccattctacttacatgagtttactcttattctaattaaaaaggtatttcatactcccaaggttattggccac |
113 |
Q |
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| T |
33252443 |
aagattatgattcctaatacctttcattccattctacttacatgagtttactcttattctaattaaaaaggtatttcatactcccaaggttattggccac |
33252344 |
T |
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| Q |
114 |
aatgaaccaagtttataaagattactgataaacctcaatgcaaatataattgcaacatcctatattttgagtagaatgactccttttcttaactcgtgag |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
33252343 |
aatgaaccaagtttataaagattactgataaacctcaatgcaaatataattgcaacatcctata--ttgagtagaatgactccttttcttaactcgtgag |
33252246 |
T |
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| Q |
214 |
tttcatatgacgatattccaatagatcgaaag |
245 |
Q |
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|||||||||||||||||| ||||||||||||| |
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| T |
33252245 |
tttcatatgacgatattcgaatagatcgaaag |
33252214 |
T |
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