View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2367_high_10 (Length: 235)
Name: NF2367_high_10
Description: NF2367
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2367_high_10 |
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Alignment Details
Target: chr4 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 11 - 219
Target Start/End: Original strand, 42027969 - 42028177
Alignment:
| Q |
11 |
ccaagaatattaaactatgatttgtaagtttcaccgattcgattgtggtccaattctaacaacattcattcaagaccatcattcatgatcatataagata |
110 |
Q |
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| T |
42027969 |
ccaacaatattaaactatgatttgtaagtttcaccgattcgattgtggtccaattctaacaacattcattcaagaccatcattcatgatcatataagata |
42028068 |
T |
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| Q |
111 |
tgcaggcagatacttacttacaatgaagggcatgaaaaggagtaaattaatttgtacatgaacatgacgaagaagaagttattattatatcataaacata |
210 |
Q |
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| T |
42028069 |
tgcaggcagatacttacttacattgatgggcatgaaaaggagtaaattaatttgtacatgaacatgacgaagaagaagttattattatatcataaacata |
42028168 |
T |
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| Q |
211 |
ggaacatat |
219 |
Q |
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| T |
42028169 |
ggaacatat |
42028177 |
T |
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