View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2367_high_9 (Length: 251)

Name: NF2367_high_9
Description: NF2367
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2367_high_9
NF2367_high_9
[»] chr7 (95 HSPs)
chr7 (1-238)||(4818659-4818896)
chr7 (1-238)||(4785659-4785896)
chr7 (1-127)||(39786283-39786409)
chr7 (1-130)||(36251443-36251573)
chr7 (5-124)||(4996032-4996151)
chr7 (174-236)||(10937597-10937660)
chr7 (175-233)||(15869591-15869650)
chr7 (2-128)||(19008620-19008744)
chr7 (175-236)||(9864367-9864429)
chr7 (9-119)||(38737170-38737279)
chr7 (164-236)||(3329699-3329772)
chr7 (175-238)||(10587063-10587127)
chr7 (177-236)||(31492928-31492988)
chr7 (1-76)||(17038300-17038375)
chr7 (175-236)||(5797507-5797569)
chr7 (175-236)||(7318269-7318331)
chr7 (1-119)||(9334458-9334576)
chr7 (175-236)||(23099993-23100055)
chr7 (164-236)||(2563803-2563875)
chr7 (5-130)||(7809540-7809665)
chr7 (196-236)||(8979047-8979087)
chr7 (181-236)||(13759901-13759957)
chr7 (178-236)||(8054099-8054158)
chr7 (164-237)||(6042446-6042519)
chr7 (179-236)||(18662441-18662499)
chr7 (164-236)||(2350788-2350861)
chr7 (178-238)||(8054528-8054589)
chr7 (164-236)||(9731668-9731741)
chr7 (181-226)||(21102344-21102389)
chr7 (1-78)||(30908404-30908481)
chr7 (174-227)||(33035468-33035521)
chr7 (5-78)||(48525723-48525796)
chr7 (196-236)||(3734614-3734654)
chr7 (1-53)||(14553693-14553745)
chr7 (181-236)||(17153195-17153251)
chr7 (5-88)||(9412405-9412488)
chr7 (175-237)||(9574403-9574466)
chr7 (1-76)||(22701595-22701670)
chr7 (1-76)||(39465565-39465640)
chr7 (1-119)||(40417284-40417400)
chr7 (196-238)||(8313434-8313476)
chr7 (186-231)||(10648585-10648631)
chr7 (175-236)||(14755171-14755233)
chr7 (5-75)||(16849253-16849323)
chr7 (5-75)||(21305660-21305730)
chr7 (178-235)||(1848269-1848325)
chr7 (99-132)||(4676395-4676428)
chr7 (5-58)||(6474973-6475026)
chr7 (201-238)||(11803103-11803140)
chr7 (174-234)||(18449237-18449298)
chr7 (175-227)||(21230308-21230361)
chr7 (5-78)||(21993697-21993770)
chr7 (5-70)||(27724972-27725037)
chr7 (5-78)||(36610098-36610171)
chr7 (5-58)||(45001134-45001187)
chr7 (179-238)||(11221203-11221263)
chr7 (181-236)||(16365707-16365763)
chr7 (175-238)||(1584541-1584603)
chr7 (174-217)||(7782556-7782599)
chr7 (174-236)||(9866582-9866644)
chr7 (174-236)||(9916561-9916624)
chr7 (174-236)||(9924473-9924536)
chr7 (162-232)||(16306677-16306748)
chr7 (174-236)||(26134789-26134851)
chr7 (15-78)||(27241320-27241383)
chr7 (5-52)||(29675024-29675071)
chr7 (12-127)||(31176549-31176664)
chr7 (19-78)||(41385928-41385987)
chr7 (175-232)||(1587677-1587735)
chr7 (175-236)||(1872781-1872843)
chr7 (163-236)||(5108550-5108623)
chr7 (175-236)||(6013589-6013651)
chr7 (182-236)||(7492304-7492358)
chr7 (178-236)||(7748127-7748184)
chr7 (198-236)||(8877441-8877479)
chr7 (175-236)||(10584527-10584589)
chr7 (196-226)||(18369031-18369061)
chr7 (179-236)||(18661590-18661648)
chr7 (5-55)||(20536188-20536238)
chr7 (5-127)||(34728943-34729065)
chr7 (5-51)||(41755561-41755607)
chr7 (5-70)||(2750150-2750215)
chr7 (5-70)||(21094211-21094276)
chr7 (5-50)||(21766399-21766444)
chr7 (174-226)||(23093305-23093357)
chr7 (5-78)||(25834322-25834395)
chr7 (175-226)||(4986551-4986603)
chr7 (175-226)||(4990649-4990701)
chr7 (5-53)||(7525634-7525682)
chr7 (196-232)||(21227197-21227233)
chr7 (177-232)||(21912525-21912581)
chr7 (10-78)||(23050274-23050342)
chr7 (5-53)||(27241200-27241248)
chr7 (101-129)||(27509380-27509408)
chr7 (5-53)||(37546596-37546644)
[»] chr6 (62 HSPs)
chr6 (1-124)||(23124178-23124301)
chr6 (1-127)||(9341219-9341345)
chr6 (162-236)||(21672476-21672551)
chr6 (164-238)||(23143707-23143782)
chr6 (162-236)||(21679892-21679967)
chr6 (175-236)||(9726018-9726080)
chr6 (167-236)||(17729140-17729210)
chr6 (1-98)||(9894609-9894706)
chr6 (164-236)||(12183372-12183445)
chr6 (5-130)||(32333480-32333605)
chr6 (1-119)||(26306460-26306578)
chr6 (162-227)||(14079494-14079560)
chr6 (175-236)||(27737730-27737792)
chr6 (164-227)||(5624625-5624689)
chr6 (196-236)||(22566203-22566243)
chr6 (1-76)||(13240907-13240982)
chr6 (175-236)||(8241273-8241335)
chr6 (5-127)||(14964986-14965108)
chr6 (175-236)||(21907428-21907490)
chr6 (175-236)||(25927344-25927406)
chr6 (180-236)||(9516786-9516843)
chr6 (175-227)||(21932102-21932155)
chr6 (1-78)||(31994310-31994387)
chr6 (164-235)||(18075430-18075502)
chr6 (175-226)||(20145111-20145163)
chr6 (175-226)||(22187676-22187728)
chr6 (181-232)||(23844510-23844562)
chr6 (184-234)||(23645810-23645861)
chr6 (175-232)||(7543005-7543063)
chr6 (175-236)||(11176946-11177008)
chr6 (196-238)||(22410366-22410408)
chr6 (196-234)||(23232026-23232064)
chr6 (180-232)||(20005924-20005977)
chr6 (5-117)||(31204265-31204378)
chr6 (3-78)||(14426398-14426474)
chr6 (184-227)||(17299881-17299925)
chr6 (174-236)||(20722218-20722279)
chr6 (181-228)||(26587622-26587670)
chr6 (5-53)||(27226932-27226980)
chr6 (5-69)||(30254532-30254596)
chr6 (25-76)||(2959304-2959355)
chr6 (5-52)||(6001572-6001619)
chr6 (18-129)||(11646254-11646365)
chr6 (1-44)||(17942296-17942339)
chr6 (196-227)||(19244603-19244634)
chr6 (5-52)||(28188735-28188782)
chr6 (174-232)||(28586075-28586134)
chr6 (5-76)||(30233100-30233171)
chr6 (14-60)||(4965751-4965797)
chr6 (175-232)||(15466366-15466423)
chr6 (5-55)||(34352592-34352642)
chr6 (1-30)||(14912272-14912301)
chr6 (7-52)||(28548525-28548570)
chr6 (5-53)||(1190393-1190441)
chr6 (175-226)||(2586717-2586769)
chr6 (89-121)||(14691079-14691111)
chr6 (176-219)||(20002440-20002484)
chr6 (12-76)||(21254714-21254778)
chr6 (7-51)||(24062117-24062161)
chr6 (179-238)||(24251516-24251576)
chr6 (204-236)||(28933701-28933733)
chr6 (181-216)||(34092327-34092363)
[»] chr2 (66 HSPs)
chr2 (164-236)||(25618542-25618614)
chr2 (1-128)||(27912812-27912939)
chr2 (164-236)||(15339223-15339296)
chr2 (165-236)||(29719272-29719344)
chr2 (5-76)||(42444369-42444440)
chr2 (1-130)||(16039090-16039219)
chr2 (164-236)||(25888261-25888334)
chr2 (164-228)||(20173347-20173411)
chr2 (174-236)||(8503111-8503174)
chr2 (178-236)||(17743517-17743576)
chr2 (178-236)||(27909160-27909219)
chr2 (1-76)||(37867430-37867505)
chr2 (175-236)||(20174676-20174738)
chr2 (196-238)||(25196028-25196070)
chr2 (175-236)||(32085459-32085521)
chr2 (180-236)||(11382794-11382851)
chr2 (5-72)||(27649131-27649198)
chr2 (1-132)||(31555701-31555832)
chr2 (5-128)||(35156018-35156141)
chr2 (1-76)||(39809274-39809349)
chr2 (6-128)||(7603884-7604006)
chr2 (1-127)||(24836486-24836611)
chr2 (1-127)||(25915390-25915516)
chr2 (178-223)||(28925521-28925566)
chr2 (164-227)||(26603400-26603464)
chr2 (12-131)||(40499551-40499668)
chr2 (174-236)||(8447091-8447153)
chr2 (201-236)||(27418389-27418424)
chr2 (5-128)||(31593723-31593846)
chr2 (1-124)||(40301810-40301932)
chr2 (1-122)||(3171650-3171768)
chr2 (5-79)||(20950046-20950120)
chr2 (1-51)||(21566045-21566095)
chr2 (200-238)||(25530469-25530507)
chr2 (200-238)||(25535296-25535334)
chr2 (164-237)||(31804940-31805014)
chr2 (5-130)||(27597034-27597159)
chr2 (1-73)||(1071337-1071409)
chr2 (178-237)||(17635815-17635875)
chr2 (5-117)||(24004777-24004888)
chr2 (19-130)||(36817720-36817832)
chr2 (5-53)||(41633512-41633560)
chr2 (1-60)||(360041-360100)
chr2 (170-236)||(9774376-9774440)
chr2 (196-239)||(28770481-28770524)
chr2 (5-128)||(41384775-41384898)
chr2 (1-44)||(44857064-44857107)
chr2 (1-39)||(22278181-22278219)
chr2 (196-238)||(30411696-30411738)
chr2 (5-51)||(33134218-33134264)
chr2 (12-58)||(33312785-33312831)
chr2 (5-127)||(42185020-42185142)
chr2 (175-220)||(45553126-45553172)
chr2 (5-70)||(3357914-3357979)
chr2 (1-78)||(9243859-9243936)
chr2 (95-128)||(15508298-15508331)
chr2 (164-236)||(17349343-17349414)
chr2 (5-53)||(9192333-9192381)
chr2 (5-53)||(9245344-9245392)
chr2 (175-226)||(12953345-12953397)
chr2 (178-237)||(17675670-17675730)
chr2 (26-78)||(19133121-19133173)
chr2 (5-53)||(24100507-24100555)
chr2 (5-53)||(35126142-35126190)
chr2 (12-76)||(39271835-39271899)
chr2 (196-232)||(45621926-45621962)
[»] chr5 (58 HSPs)
chr5 (165-238)||(25550543-25550617)
chr5 (1-128)||(9616431-9616558)
chr5 (5-76)||(27174967-27175038)
chr5 (5-130)||(17916253-17916378)
chr5 (181-236)||(19086220-19086276)
chr5 (1-76)||(35583398-35583473)
chr5 (175-236)||(15469932-15469994)
chr5 (175-236)||(24266996-24267057)
chr5 (175-236)||(24343627-24343688)
chr5 (5-70)||(7464297-7464362)
chr5 (178-238)||(15375921-15375982)
chr5 (174-226)||(23014660-23014712)
chr5 (178-236)||(19004267-19004326)
chr5 (175-236)||(18208290-18208351)
chr5 (198-236)||(23388879-23388917)
chr5 (1-78)||(16312779-16312856)
chr5 (35-124)||(18524624-18524713)
chr5 (175-231)||(24167630-24167687)
chr5 (180-236)||(24245585-24245642)
chr5 (178-238)||(34128636-34128696)
chr5 (1-78)||(38099016-38099093)
chr5 (5-58)||(43369956-43370009)
chr5 (5-53)||(8839659-8839707)
chr5 (5-130)||(13998972-13999099)
chr5 (162-233)||(19051532-19051604)
chr5 (196-236)||(20315471-20315511)
chr5 (5-76)||(22702079-22702148)
chr5 (196-235)||(24140460-24140499)
chr5 (5-52)||(31796439-31796486)
chr5 (5-56)||(35627441-35627492)
chr5 (5-76)||(36226304-36226375)
chr5 (10-53)||(42521879-42521922)
chr5 (175-236)||(17171594-17171656)
chr5 (196-238)||(17185481-17185523)
chr5 (180-237)||(17431884-17431942)
chr5 (5-55)||(19289006-19289056)
chr5 (175-236)||(24852213-24852275)
chr5 (100-130)||(36226216-36226246)
chr5 (5-51)||(38697180-38697226)
chr5 (5-58)||(1384496-1384549)
chr5 (1-58)||(15341450-15341507)
chr5 (175-235)||(15690774-15690834)
chr5 (5-58)||(17065121-17065174)
chr5 (5-58)||(24007323-24007376)
chr5 (5-78)||(25524440-25524513)
chr5 (14-127)||(30841429-30841541)
chr5 (6-58)||(8990150-8990202)
chr5 (181-217)||(15492955-15492991)
chr5 (200-236)||(17315141-17315177)
chr5 (196-236)||(19283896-19283936)
chr5 (175-234)||(22755517-22755577)
chr5 (5-77)||(24250744-24250816)
chr5 (175-238)||(25402376-25402440)
chr5 (175-238)||(26110501-26110564)
chr5 (175-238)||(26121363-26121426)
chr5 (196-236)||(34487656-34487695)
chr5 (5-53)||(36954222-36954270)
chr5 (5-53)||(42718594-42718642)
[»] chr1 (74 HSPs)
chr1 (1-129)||(15596685-15596813)
chr1 (162-234)||(17359145-17359218)
chr1 (5-76)||(898712-898783)
chr1 (163-236)||(21449073-21449147)
chr1 (1-130)||(23773567-23773700)
chr1 (5-128)||(16823797-16823920)
chr1 (164-236)||(13345377-13345450)
chr1 (1-119)||(777347-777465)
chr1 (178-235)||(15544008-15544066)
chr1 (175-236)||(17837513-17837575)
chr1 (5-127)||(21343661-21343783)
chr1 (5-127)||(21348526-21348648)
chr1 (175-236)||(24281273-24281335)
chr1 (175-235)||(22664202-22664263)
chr1 (178-238)||(24306344-24306405)
chr1 (1-129)||(42676451-42676579)
chr1 (5-76)||(9978262-9978333)
chr1 (178-236)||(12208600-12208659)
chr1 (7-78)||(12266732-12266803)
chr1 (1-60)||(13309222-13309281)
chr1 (174-236)||(26540891-26540953)
chr1 (175-236)||(147627-147689)
chr1 (1-79)||(6045045-6045123)
chr1 (175-236)||(12012841-12012903)
chr1 (175-236)||(23038053-23038114)
chr1 (178-238)||(14779564-14779625)
chr1 (180-236)||(17610297-17610354)
chr1 (178-238)||(18736279-18736340)
chr1 (175-227)||(32383048-32383101)
chr1 (175-234)||(9787922-9787982)
chr1 (175-226)||(27117769-27117821)
chr1 (1-36)||(18115750-18115785)
chr1 (5-76)||(18227158-18227229)
chr1 (178-236)||(25405671-25405730)
chr1 (5-76)||(43019734-43019805)
chr1 (175-236)||(3591694-3591756)
chr1 (175-236)||(16787767-16787829)
chr1 (198-236)||(21666649-21666687)
chr1 (1-78)||(13281223-13281300)
chr1 (5-54)||(14258933-14258982)
chr1 (178-234)||(29242518-29242575)
chr1 (91-128)||(47401591-47401628)
chr1 (175-234)||(17121523-17121582)
chr1 (178-233)||(21988026-21988082)
chr1 (175-234)||(22620258-22620318)
chr1 (175-234)||(24267825-24267885)
chr1 (196-236)||(34480987-34481027)
chr1 (1-124)||(7491574-7491696)
chr1 (1-44)||(8209628-8209671)
chr1 (5-76)||(10172167-10172238)
chr1 (5-48)||(13315394-13315437)
chr1 (178-236)||(18825655-18825713)
chr1 (198-233)||(22622910-22622945)
chr1 (174-217)||(33712659-33712702)
chr1 (1-60)||(43416089-43416148)
chr1 (5-51)||(17605571-17605617)
chr1 (175-236)||(21847630-21847691)
chr1 (183-236)||(33190681-33190735)
chr1 (7-56)||(9417187-9417236)
chr1 (13-126)||(15874767-15874880)
chr1 (5-70)||(16143653-16143718)
chr1 (182-234)||(16179010-16179063)
chr1 (5-70)||(24162642-24162707)
chr1 (175-219)||(26649028-26649073)
chr1 (5-58)||(37706227-37706280)
chr1 (5-70)||(49162496-49162561)
chr1 (200-236)||(727489-727525)
chr1 (92-128)||(5256998-5257034)
chr1 (5-53)||(8573841-8573889)
chr1 (12-76)||(15476236-15476300)
chr1 (198-238)||(16069590-16069630)
chr1 (178-233)||(21334763-21334819)
chr1 (5-69)||(34969542-34969606)
chr1 (35-75)||(44922869-44922909)
[»] chr8 (68 HSPs)
chr8 (1-111)||(13369349-13369459)
chr8 (3-79)||(2079507-2079583)
chr8 (175-238)||(29382400-29382464)
chr8 (1-76)||(11941395-11941470)
chr8 (164-236)||(24110696-24110769)
chr8 (164-238)||(24114321-24114396)
chr8 (181-234)||(17101936-17101990)
chr8 (176-237)||(24904630-24904692)
chr8 (180-226)||(26615293-26615339)
chr8 (1-79)||(30134297-30134375)
chr8 (1-78)||(15044486-15044563)
chr8 (1-77)||(16243512-16243588)
chr8 (175-234)||(30806540-30806600)
chr8 (175-234)||(34497111-34497171)
chr8 (1-124)||(9187314-9187437)
chr8 (175-236)||(5850937-5850999)
chr8 (175-236)||(14528145-14528207)
chr8 (198-236)||(17509266-17509304)
chr8 (1-78)||(23085740-23085815)
chr8 (1-130)||(9788476-9788604)
chr8 (174-226)||(26008018-26008071)
chr8 (184-236)||(30783782-30783835)
chr8 (5-76)||(4438077-4438148)
chr8 (1-44)||(11929823-11929866)
chr8 (174-236)||(14006090-14006153)
chr8 (1-76)||(29905870-29905945)
chr8 (1-39)||(4535793-4535831)
chr8 (175-236)||(15238795-15238857)
chr8 (175-236)||(17976615-17976677)
chr8 (175-236)||(30122196-30122257)
chr8 (184-236)||(2637603-2637656)
chr8 (27-76)||(4418170-4418219)
chr8 (5-78)||(12838370-12838443)
chr8 (164-236)||(13315033-13315105)
chr8 (166-238)||(24269585-24269657)
chr8 (175-234)||(19786727-19786787)
chr8 (175-234)||(28276801-28276860)
chr8 (191-238)||(21314636-21314683)
chr8 (5-52)||(26169773-26169820)
chr8 (5-44)||(32856815-32856854)
chr8 (7-78)||(45356665-45356735)
chr8 (175-236)||(5052962-5053024)
chr8 (5-79)||(15837822-15837896)
chr8 (198-236)||(24723482-24723520)
chr8 (12-70)||(26527893-26527951)
chr8 (12-70)||(28969850-28969908)
chr8 (175-220)||(30235373-30235419)
chr8 (5-51)||(33480691-33480737)
chr8 (5-51)||(38498157-38498203)
chr8 (5-51)||(39534449-39534495)
chr8 (101-130)||(3739295-3739324)
chr8 (5-70)||(15898632-15898697)
chr8 (5-58)||(16822938-16822991)
chr8 (5-58)||(25722622-25722675)
chr8 (174-234)||(31288353-31288413)
chr8 (8-53)||(32345334-32345379)
chr8 (8-53)||(32361942-32361987)
chr8 (5-58)||(36343440-36343493)
chr8 (5-70)||(36802173-36802238)
chr8 (1-54)||(42862457-42862510)
chr8 (99-132)||(43921934-43921967)
chr8 (5-50)||(45488797-45488842)
chr8 (102-130)||(1170258-1170286)
chr8 (196-236)||(14075612-14075652)
chr8 (200-232)||(23893246-23893278)
chr8 (189-232)||(27659455-27659499)
chr8 (196-232)||(28317432-28317467)
chr8 (14-70)||(32889070-32889126)
[»] chr3 (87 HSPs)
chr3 (164-236)||(21301903-21301976)
chr3 (164-236)||(2167658-2167730)
chr3 (1-76)||(19468244-19468319)
chr3 (175-236)||(6289899-6289961)
chr3 (164-236)||(16245770-16245843)
chr3 (5-124)||(27397886-27398005)
chr3 (175-236)||(12805931-12805993)
chr3 (1-123)||(29626023-29626145)
chr3 (174-231)||(51119289-51119346)
chr3 (175-234)||(13908269-13908328)
chr3 (181-236)||(17438472-17438527)
chr3 (175-236)||(10917914-10917976)
chr3 (12-122)||(17438954-17439064)
chr3 (1-119)||(35380135-35380253)
chr3 (7-127)||(5907502-5907621)
chr3 (1-69)||(23267824-23267892)
chr3 (179-237)||(11518001-11518060)
chr3 (174-236)||(12759382-12759445)
chr3 (162-236)||(21303395-21303470)
chr3 (162-232)||(41508350-41508421)
chr3 (174-236)||(21083306-21083368)
chr3 (175-227)||(10744898-10744951)
chr3 (5-78)||(19224696-19224769)
chr3 (180-236)||(22349410-22349467)
chr3 (5-58)||(28391118-28391171)
chr3 (1-78)||(49758603-49758680)
chr3 (196-236)||(821555-821595)
chr3 (177-236)||(12411149-12411209)
chr3 (1-113)||(21969329-21969441)
chr3 (1-113)||(21991765-21991877)
chr3 (178-236)||(8770019-8770077)
chr3 (166-236)||(18458465-18458536)
chr3 (5-76)||(27400250-27400321)
chr3 (174-236)||(28728939-28729002)
chr3 (1-76)||(34667256-34667330)
chr3 (6-53)||(51006000-51006047)
chr3 (6-124)||(18956711-18956829)
chr3 (175-236)||(21325336-21325398)
chr3 (5-127)||(24487571-24487693)
chr3 (14-75)||(4578033-4578094)
chr3 (5-130)||(7791470-7791595)
chr3 (5-53)||(261062-261110)
chr3 (175-238)||(3116458-3116521)
chr3 (196-236)||(8557170-8557210)
chr3 (7-75)||(13367776-13367844)
chr3 (5-69)||(19559103-19559167)
chr3 (181-236)||(27542956-27543011)
chr3 (5-53)||(40360150-40360198)
chr3 (1-113)||(45879547-45879659)
chr3 (99-130)||(12565816-12565847)
chr3 (99-130)||(13155735-13155766)
chr3 (99-130)||(13260219-13260250)
chr3 (1-44)||(21967212-21967255)
chr3 (1-44)||(21989648-21989691)
chr3 (5-52)||(24171160-24171207)
chr3 (189-236)||(52517834-52517880)
chr3 (1-47)||(2513595-2513641)
chr3 (196-238)||(4650249-4650291)
chr3 (175-236)||(5508332-5508393)
chr3 (200-238)||(8889191-8889229)
chr3 (12-58)||(12673169-12673215)
chr3 (24-78)||(21030806-21030860)
chr3 (175-236)||(21825910-21825971)
chr3 (5-78)||(10824036-10824109)
chr3 (5-58)||(14899626-14899679)
chr3 (12-77)||(15522151-15522216)
chr3 (175-239)||(18736710-18736774)
chr3 (5-78)||(21092180-21092253)
chr3 (1-77)||(28310131-28310208)
chr3 (1-78)||(54982312-54982388)
chr3 (5-53)||(796264-796312)
chr3 (12-76)||(12565733-12565797)
chr3 (12-76)||(13155659-13155723)
chr3 (12-76)||(13260136-13260200)
chr3 (19-71)||(14418823-14418875)
chr3 (5-69)||(15569544-15569608)
chr3 (5-49)||(18387131-18387175)
chr3 (196-236)||(19171875-19171915)
chr3 (196-232)||(20429728-20429764)
chr3 (17-73)||(21080428-21080484)
chr3 (17-73)||(21085017-21085073)
chr3 (5-53)||(21595326-21595374)
chr3 (5-53)||(21824623-21824671)
chr3 (5-53)||(22525931-22525979)
chr3 (5-53)||(28370230-28370278)
chr3 (5-53)||(28378048-28378096)
chr3 (5-53)||(28385870-28385918)
[»] chr4 (88 HSPs)
chr4 (1-75)||(6788371-6788445)
chr4 (175-236)||(13692710-13692772)
chr4 (162-236)||(24639495-24639569)
chr4 (1-78)||(47044477-47044553)
chr4 (1-78)||(53451038-53451115)
chr4 (175-238)||(14648891-14648955)
chr4 (1-124)||(893646-893769)
chr4 (162-236)||(17671985-17672060)
chr4 (1-68)||(20818389-20818456)
chr4 (1-127)||(24637659-24637786)
chr4 (164-219)||(40227762-40227817)
chr4 (179-236)||(13908854-13908912)
chr4 (1-127)||(26510435-26510561)
chr4 (1-126)||(54983015-54983139)
chr4 (196-236)||(7582315-7582355)
chr4 (4-76)||(52793959-52794031)
chr4 (1-128)||(2011911-2012038)
chr4 (178-236)||(17216816-17216875)
chr4 (5-76)||(54856168-54856239)
chr4 (163-236)||(13992917-13992991)
chr4 (179-236)||(20315000-20315058)
chr4 (1-79)||(34409971-34410049)
chr4 (5-78)||(143647-143720)
chr4 (181-237)||(11093966-11094023)
chr4 (164-236)||(12578307-12578380)
chr4 (5-58)||(19438029-19438082)
chr4 (180-236)||(19492741-19492798)
chr4 (164-236)||(19562219-19562292)
chr4 (175-238)||(11490528-11490592)
chr4 (175-226)||(12318429-12318481)
chr4 (175-226)||(13128925-13128977)
chr4 (179-226)||(17709757-17709805)
chr4 (174-236)||(19900575-19900637)
chr4 (5-76)||(21954704-21954775)
chr4 (176-226)||(22176013-22176064)
chr4 (7-130)||(35603330-35603453)
chr4 (5-68)||(37143524-37143587)
chr4 (175-236)||(3774821-3774882)
chr4 (175-232)||(5679201-5679259)
chr4 (5-67)||(19545396-19545458)
chr4 (164-226)||(19636637-19636699)
chr4 (2-44)||(30859561-30859603)
chr4 (174-222)||(1833648-1833697)
chr4 (1-130)||(4609118-4609247)
chr4 (2-51)||(5661919-5661968)
chr4 (164-209)||(11935176-11935221)
chr4 (176-236)||(19929716-19929777)
chr4 (6-123)||(48737632-48737748)
chr4 (5-58)||(50412746-50412799)
chr4 (175-234)||(17951339-17951399)
chr4 (175-234)||(17955191-17955251)
chr4 (1-53)||(32006980-32007032)
chr4 (1-53)||(34334757-34334809)
chr4 (5-69)||(43491282-43491346)
chr4 (175-225)||(9737561-9737612)
chr4 (99-130)||(20702108-20702139)
chr4 (175-217)||(20829798-20829841)
chr4 (5-52)||(21020676-21020723)
chr4 (6-53)||(31691082-31691129)
chr4 (5-52)||(40314820-40314867)
chr4 (5-52)||(40324896-40324943)
chr4 (28-78)||(10250346-10250396)
chr4 (185-219)||(10589719-10589753)
chr4 (175-236)||(11700610-11700672)
chr4 (175-232)||(15047124-15047182)
chr4 (175-232)||(15107242-15107300)
chr4 (175-232)||(19882636-19882694)
chr4 (175-236)||(21323916-21323978)
chr4 (1-43)||(34659082-34659124)
chr4 (5-70)||(12214765-12214830)
chr4 (174-222)||(15050138-15050186)
chr4 (174-222)||(15104238-15104286)
chr4 (189-234)||(17337178-17337223)
chr4 (175-227)||(19092291-19092344)
chr4 (184-236)||(22526369-22526422)
chr4 (35-124)||(29656369-29656458)
chr4 (5-58)||(43317433-43317486)
chr4 (5-53)||(4589765-4589813)
chr4 (162-233)||(9052657-9052728)
chr4 (126-158)||(9828518-9828550)
chr4 (101-129)||(10249082-10249110)
chr4 (181-236)||(11521232-11521288)
chr4 (5-77)||(12114840-12114912)
chr4 (5-53)||(13265386-13265434)
chr4 (171-222)||(13787192-13787244)
chr4 (5-53)||(23431993-23432041)
chr4 (5-76)||(27376532-27376604)
chr4 (5-53)||(48508958-48509006)
[»] scaffold0005 (1 HSPs)
scaffold0005 (175-238)||(168337-168401)
[»] scaffold0154 (1 HSPs)
scaffold0154 (1-76)||(32822-32897)
[»] scaffold0001 (1 HSPs)
scaffold0001 (169-236)||(69072-69139)
[»] scaffold0638 (1 HSPs)
scaffold0638 (181-234)||(866-919)
[»] scaffold0128 (1 HSPs)
scaffold0128 (1-130)||(43321-43450)
[»] scaffold0622 (1 HSPs)
scaffold0622 (175-226)||(724-776)
[»] scaffold0008 (2 HSPs)
scaffold0008 (175-238)||(54856-54920)
scaffold0008 (178-232)||(48235-48290)
[»] scaffold0136 (1 HSPs)
scaffold0136 (158-236)||(15506-15585)
[»] scaffold0650 (1 HSPs)
scaffold0650 (175-236)||(6283-6345)
[»] scaffold0118 (1 HSPs)
scaffold0118 (14-76)||(14370-14432)
[»] scaffold0043 (1 HSPs)
scaffold0043 (175-232)||(89899-89956)
[»] scaffold0056 (1 HSPs)
scaffold0056 (201-238)||(21299-21336)
[»] scaffold0672 (1 HSPs)
scaffold0672 (196-238)||(1752-1794)
[»] scaffold0016 (1 HSPs)
scaffold0016 (198-236)||(3551-3589)
[»] scaffold0013 (2 HSPs)
scaffold0013 (1-131)||(101253-101383)
scaffold0013 (5-130)||(41739-41864)
[»] scaffold0957 (1 HSPs)
scaffold0957 (164-236)||(3138-3210)
[»] scaffold0838 (1 HSPs)
scaffold0838 (180-236)||(2371-2428)
[»] scaffold0832 (1 HSPs)
scaffold0832 (180-236)||(2402-2459)
[»] scaffold0193 (1 HSPs)
scaffold0193 (1-128)||(21711-21835)
[»] scaffold0041 (1 HSPs)
scaffold0041 (14-119)||(32336-32441)
[»] scaffold1869 (1 HSPs)
scaffold1869 (179-238)||(428-488)
[»] scaffold0734 (1 HSPs)
scaffold0734 (5-53)||(4221-4269)
[»] scaffold0155 (1 HSPs)
scaffold0155 (196-236)||(36036-36076)
[»] scaffold0024 (1 HSPs)
scaffold0024 (196-236)||(39602-39642)
[»] scaffold0002 (2 HSPs)
scaffold0002 (99-130)||(151222-151253)
scaffold0002 (12-76)||(151265-151329)
[»] scaffold0712 (1 HSPs)
scaffold0712 (5-119)||(5574-5688)
[»] scaffold0709 (1 HSPs)
scaffold0709 (5-119)||(5592-5706)
[»] scaffold0143 (1 HSPs)
scaffold0143 (5-51)||(5943-5989)
[»] scaffold0054 (1 HSPs)
scaffold0054 (181-226)||(72074-72120)
[»] scaffold0543 (1 HSPs)
scaffold0543 (5-78)||(5067-5140)
[»] scaffold0526 (1 HSPs)
scaffold0526 (5-78)||(9435-9508)
[»] scaffold0492 (1 HSPs)
scaffold0492 (5-78)||(6613-6686)
[»] scaffold0394 (1 HSPs)
scaffold0394 (174-222)||(13963-14011)
[»] scaffold0102 (1 HSPs)
scaffold0102 (164-236)||(35522-35595)
[»] scaffold1578 (1 HSPs)
scaffold1578 (5-53)||(1379-1427)
[»] scaffold0620 (1 HSPs)
scaffold0620 (181-216)||(7661-7697)
[»] scaffold0035 (1 HSPs)
scaffold0035 (177-236)||(69911-69971)
[»] scaffold0019 (1 HSPs)
scaffold0019 (204-232)||(11266-11294)
[»] scaffold0014 (1 HSPs)
scaffold0014 (5-53)||(21304-21352)


Alignment Details
Target: chr7 (Bit Score: 230; Significance: 1e-127; HSPs: 95)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 4818659 - 4818896
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  4818659 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaaggg 4818758  T
Q  101 gttattttctttatatatagtatagatataaaggaccaagtttgattgaaaaaggttaacaactgatgtgcggtttaggcaagtgtatcaaatcgttacc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4818759 gttattttctttatatatagtatagatataaaggaccaagtttgattgaaaaaggttaacaactgatgtgcggtttaggcaagtgtatcaaatcgttacc 4818858  T
Q  201 aagtaataaagtgataagtagagtatcatatccacagg 238  Q
    |||||||||||||||||||||||||||| |||||||||    
T  4818859 aagtaataaagtgataagtagagtatcacatccacagg 4818896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 4785659 - 4785896
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  4785659 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttagaaagagaaaaagttggcacaaaaaatccaaaaggg 4785758  T
Q  101 gttattttctttatatatagtatagatataaaggaccaagtttgattgaaaaaggttaacaactgatgtgcggtttaggcaagtgtatcaaatcgttacc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4785759 gttattttctttatatatagtatagatataaaggaccaagtttgattgaaaaaggttaacaactgatgtgcggtttaggcaagtgtatcaaatcgttacc 4785858  T
Q  201 aagtaataaagtgataagtagagtatcatatccacagg 238  Q
    |||||||||||||||||||||||||||| |||||||||    
T  4785859 aagtaataaagtgataagtagagtatcacatccacagg 4785896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 39786409 - 39786283
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgg 100  Q
    ||||||||||||||||||||||| ||||||||| |||||||||| ||| |||| |||| | |||||||||||||||||  || ||||| |  || |||      
T  39786409 tttgaatttactcttatctatttgttatatgtgttatttgtattgaaagttgagggtagttttggaaagagaaaaagtcagcccaaaagagtcagaacat 39786310  T
Q  101 gttattttctttatatatagtatagat 127  Q
    | |||||||||||||||||||||||||    
T  39786309 gctattttctttatatatagtatagat 39786283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 36251573 - 36251443
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgg 100  Q
    ||||||||||||||||||||||| ||||||||| |||||||||| ||| ||||||||||| || |||| | |||||||  || ||||||| | |||||      
T  36251573 tttgaatttactcttatctatttgttatatgtgttatttgtattgaaagttgaaggtaattttagaaaaataaaaagtcagctcaaaaaagctaaaacaa 36251474  T
Q  101 gttattttc-tttatatatagtatagatata 130  Q
    ||  ||||| |||||||||||||||||||||    
T  36251473 gtcgttttcttttatatatagtatagatata 36251443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 124
Target Start/End: Complemental strand, 4996151 - 4996032
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgggtta 104  Q
    ||||||||||||||||||| ||||||||| ||| | |||||||| ||||   |||| |||||||||||||| ||| || ||||| |  ||||||  ||||    
T  4996151 aatttactcttatctatttgttatatgtgttatctctattaaaagttgagactaattttggaaagagaaaacgttagctcaaaagaggcaaaacatgtta 4996052  T
Q  105 ttttctttatatatagtata 124  Q
    |||| |||||||||||||||    
T  4996051 ttttttttatatatagtata 4996032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 174 - 236
Target Start/End: Original strand, 10937597 - 10937660
Alignment:
Q  174 tttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| |||||| ||||||||    
T  10937597 tttaggcaagtgtatcaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccaca 10937660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 175 - 233
Target Start/End: Original strand, 15869591 - 15869650
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatcc 233  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  15869591 ttaggcaagtgtatcaaatcgtttaccaagtaataaagtgataagtagagtatcgtatcc 15869650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 128
Target Start/End: Original strand, 19008620 - 19008744
Alignment:
Q  2 ttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacggg 101  Q
    |||||||| ||||||||| ||| |||| |||  |||||||||| ||| || | |||||| ||| ||||| |||||||  || ||||||| |||||||  |    
T  19008620 ttgaattttctcttatctctttgttatgtgt--tatttgtattgaaagtttatggtaattttgaaaagataaaaagtcagcccaaaaaaaccaaaacatg 19008717  T
Q  102 ttattttctttatatatagtatagata 128  Q
    |||||||||||||||||||||||||||    
T  19008718 ttattttctttatatatagtatagata 19008744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 175 - 236
Target Start/End: Complemental strand, 9864429 - 9864367
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    ||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  9864429 ttaggcaagtgtaccaaattgtttaccaagtaataaagtgataagtagagtatcatatccaca 9864367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 9 - 119
Target Start/End: Complemental strand, 38737279 - 38737170
Alignment:
Q  9 tactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgggttatttt 108  Q
    ||||||||||||||||||||||||||||||||| || ||| |||| |||||| | | |||||||||||||  || |||||||  |||||  |||||||||    
T  38737279 tactcttatctatttattatatgtgctatttgtgtttaaagttgagggtaatttggaaaagagaaaaagtcagcccaaaaaagtcaaaa-aggttatttt 38737181  T
Q  109 ctttatatata 119  Q
    |||| ||||||    
T  38737180 ctttttatata 38737170  T

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Target: chr7; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 164 - 236
Target Start/End: Complemental strand, 3329772 - 3329699
Alignment:
Q  164 tgatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||||||||| ||||| |||||||||||||  || |||||||||||||||||||||||||||||| ||||||||    
T  3329772 tgatgtgcggattaggtaagtgtatcaaattatttaccaagtaataaagtgataagtagagtatcgtatccaca 3329699  T

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Target: chr7; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 238
Target Start/End: Complemental strand, 10587127 - 10587063
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagg 238  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||||||||| |||| |||||    
T  10587127 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatctacagg 10587063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 177 - 236
Target Start/End: Original strand, 31492928 - 31492988
Alignment:
Q  177 aggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||    
T  31492928 aggcaagtgtatcaaatcgtttaccaggtaataaagtgataagtagagtatcgtatccaca 31492988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 17038375 - 17038300
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaa 76  Q
    ||||||||||||||||||||||| |||||||||| ||||||||| ||| ||||  ||||| ||| |||||||||||    
T  17038375 tttgaatttactcttatctatttgttatatgtgcaatttgtattgaaagttgattgtaattttgaaaagagaaaaa 17038300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 5797507 - 5797569
Alignment:
Q  175 ttaggcaagtgtatcaaatcg-ttaccaagtaataaagtgataagtagagtatcatatccaca 236  Q
    ||||||||||||| ||||||| ||||||||||||||||| |||||||||||||| ||||||||    
T  5797507 ttaggcaagtgtaacaaatcgcttaccaagtaataaagtaataagtagagtatcgtatccaca 5797569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 7318269 - 7318331
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    ||||||||||||| || |||||| |||||||||||||||||||||||||||||| ||||||||    
T  7318269 ttaggcaagtgtaccatatcgtttaccaagtaataaagtgataagtagagtatcgtatccaca 7318331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 9334576 - 9334458
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgg 100  Q
    ||||||| |||| |||||||||| |||||| |  |||||||||| |||||||| |||||| ||| |||||||||| ||  || ||||| |  ||||||      
T  9334576 tttgaatctacttttatctatttgttatatatattatttgtattgaaaattgagggtaattttgaaaagagaaaatgtcagcccaaaagagtcaaaacat 9334477  T
Q  101 gttattttctttatatata 119  Q
    |||||||||||||||||||    
T  9334476 gttattttctttatatata 9334458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 175 - 236
Target Start/End: Complemental strand, 23100055 - 23099993
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    ||||||||||||| ||||||||| ||||| |||||||||||||||||||||||| ||||||||    
T  23100055 ttaggcaagtgtaccaaatcgtttaccaaataataaagtgataagtagagtatcgtatccaca 23099993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 164 - 236
Target Start/End: Original strand, 2563803 - 2563875
Alignment:
Q  164 tgatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||||||||| ||| ||||||||| ||||||||| |||||||||||||||| ||||||||||||| ||||||||    
T  2563803 tgatgtgcggattatgcaagtgtaccaaatcgtttaccaagtaataaagtg-taagtagagtatcgtatccaca 2563875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 130
Target Start/End: Complemental strand, 7809665 - 7809540
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgggtta 104  Q
    ||||||||||||||| ||| |||||| |  |||||||||| ||||||||||| ||| ||| || |||||||||    | ||||| | ||||||  || ||    
T  7809665 aatttactcttatctgtttgttatatatattatttgtattgaaaattgaaggcaattttgtaaggagaaaaagacaacccaaaagagccaaaataggcta 7809566  T
Q  105 ttttctttatatatagtatagatata 130  Q
    ||||||| ||||||||||||||||||    
T  7809565 ttttcttaatatatagtatagatata 7809540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 196 - 236
Target Start/End: Complemental strand, 8979087 - 8979047
Alignment:
Q  196 ttaccaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  8979087 ttaccaagtaataaagtgataagtagagtatcatatccaca 8979047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 236
Target Start/End: Complemental strand, 13759957 - 13759901
Alignment:
Q  181 aagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    ||||||| ||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  13759957 aagtgtaccaaatcgtttaccaattaataaagtgataagtagagtatcatatccaca 13759901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 178 - 236
Target Start/End: Complemental strand, 8054158 - 8054099
Alignment:
Q  178 ggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||||||||| ||||||||| |||||||||||||||||||| ||||||||| ||||||||    
T  8054158 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataattagagtatcgtatccaca 8054099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 237
Target Start/End: Original strand, 6042446 - 6042519
Alignment:
Q  164 tgatgtgcggtttaggcaagtgtatcaaatcg-ttaccaagtaataaagtgataagtagagtatcatatccacag 237  Q
    |||||||||| |||| |||||||||||||||| |||||| |||||||| || ||||||||||||| |||||||||    
T  6042446 tgatgtgcggattagacaagtgtatcaaatcgtttaccatgtaataaaatg-taagtagagtatcgtatccacag 6042519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 18662441 - 18662499
Alignment:
Q  179 gcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    ||||||||||||||||||| |||||| | ||||||||||||||||||||| ||||||||    
T  18662441 gcaagtgtatcaaatcgtttaccaagcactaaagtgataagtagagtatcgtatccaca 18662499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 164 - 236
Target Start/End: Complemental strand, 2350861 - 2350788
Alignment:
Q  164 tgatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||||||||| ||||||||||||| |||||| || ||||||||||||| || |||||||| |||| ||||||||    
T  2350861 tgatgtgcggattaggcaagtgtaccaaatcatttaccaagtaataaactgctaagtagattatcgtatccaca 2350788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 178 - 238
Target Start/End: Complemental strand, 8054589 - 8054528
Alignment:
Q  178 ggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagg 238  Q
    |||||||||| ||||||||| ||||| |||||||||||||||||||||||| ||| ||||||    
T  8054589 ggcaagtgtaccaaatcgtttaccaaataataaagtgataagtagagtatcgtattcacagg 8054528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 164 - 236
Target Start/End: Complemental strand, 9731741 - 9731668
Alignment:
Q  164 tgatgtgcggtttaggcaagtgtatcaaatcg-ttaccaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||||||||| ||||||||||||| ||||||| |||  ||||| ||||||||||||||||||||| || |||||    
T  9731741 tgatgtgcggattaggcaagtgtaccaaatcgtttaaaaagtagtaaagtgataagtagagtatcgtaaccaca 9731668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 181 - 226
Target Start/End: Complemental strand, 21102389 - 21102344
Alignment:
Q  181 aagtgtatcaaatcgttaccaagtaataaagtgataagtagagtat 226  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||    
T  21102389 aagtgtattgaatcgttaccaagtaataaagtgataagtagagtat 21102344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 30908481 - 30908404
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagt 78  Q
    |||||||||||| |||||||||||||||||||| |||||||||| ||| |||  | |||| ||  |||||||||||||    
T  30908481 tttgaatttacttttatctatttattatatgtgttatttgtattgaaagttgtggataattttaaaaagagaaaaagt 30908404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 227
Target Start/End: Original strand, 33035468 - 33035521
Alignment:
Q  174 tttaggcaagtgtatcaaatcgttaccaagtaataaagtgataagtagagtatc 227  Q
    ||||||||||||||||||||||||  | ||||||||||||||| ||||||||||    
T  33035468 tttaggcaagtgtatcaaatcgtttaccagtaataaagtgataggtagagtatc 33035521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 48525796 - 48525723
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagt 78  Q
    |||||| |||||||||||| ||| ||||| |||||||||| |||||||| |||| | ||||||| |||||||||    
T  48525796 aatttattcttatctatttgttacatgtgttatttgtattgaaaattgagggtatttttggaaaaagaaaaagt 48525723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 196 - 236
Target Start/End: Original strand, 3734614 - 3734654
Alignment:
Q  196 ttaccaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  3734614 ttaccaagtaataaagtgataagtagagtatcgtatccaca 3734654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 14553693 - 14553745
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattga 53  Q
    |||||||||||| |||||||||| |||||||||||||||||||| ||| ||||    
T  14553693 tttgaatttacttttatctatttgttatatgtgctatttgtatttaaagttga 14553745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 181 - 236
Target Start/End: Complemental strand, 17153251 - 17153195
Alignment:
Q  181 aagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    ||||||||||||| ||| ||||||||| |||||||||||||||||||| ||||||||    
T  17153251 aagtgtatcaaatagtttaccaagtaagaaagtgataagtagagtatcgtatccaca 17153195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 88
Target Start/End: Complemental strand, 9412488 - 9412405
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaa 88  Q
    |||||| |||||||||||| ||||||||| |||||||||| |||||||||  || | || ||||||||||| | |||| |||||    
T  9412488 aatttattcttatctatttgttatatgtgttatttgtattgaaaattgaatatatttttagaaagagaaaaggctggcccaaaa 9412405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 237
Target Start/End: Original strand, 9574403 - 9574466
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacag 237  Q
    |||||||||||||  |||||||| |||||| ||||||||||||||||||||||| |||| ||||    
T  9574403 ttaggcaagtgtactaaatcgtttaccaaggaataaagtgataagtagagtatcgtatctacag 9574466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 22701670 - 22701595
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaa 76  Q
    ||||||||||||||||||||||| ||||||||| |||| | | | ||| |||| |||||| |||||| ||||||||    
T  22701670 tttgaatttactcttatctatttgttatatgtgatattcgcaatgaaagttgagggtaattttggaaggagaaaaa 22701595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 39465565 - 39465640
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaa 76  Q
    |||||||||||| |||||||||| ||||||||  |||||||||| ||| |||| |||||| ||| || ||||||||    
T  39465565 tttgaatttacttttatctatttgttatatgtattatttgtattgaaagttgagggtaattttgaaaggagaaaaa 39465640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 40417400 - 40417284
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgg 100  Q
    |||| |||||||||||||||||| |  |||||| |||||||||| ||||||||  ||||| ||| |||||||| || |||||  |||| | ||||||| |    
T  40417400 tttgcatttactcttatctatttgt--tatgtgttatttgtattgaaaattgagcgtaattttgaaaagagaataaattggcttaaaagaaccaaaacag 40417303  T
Q  101 gttattttctttatatata 119  Q
      |||||||||| ||||||    
T  40417302 actattttctttttatata 40417284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 196 - 238
Target Start/End: Complemental strand, 8313476 - 8313434
Alignment:
Q  196 ttaccaagtaataaagtgataagtagagtatcatatccacagg 238  Q
    ||||||||||||||||||||||||||| |||| ||||||||||    
T  8313476 ttaccaagtaataaagtgataagtagattatcgtatccacagg 8313434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 186 - 231
Target Start/End: Original strand, 10648585 - 10648631
Alignment:
Q  186 tatcaaatcgtt-accaagtaataaagtgataagtagagtatcatat 231  Q
    |||||||||||| |||||||||||||||||||| |||||||||||||    
T  10648585 tatcaaatcgtttaccaagtaataaagtgataaatagagtatcatat 10648631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 236
Target Start/End: Complemental strand, 14755233 - 14755171
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||| |||||||| ||||||||| | |||||| |||||||| |||||||||||||||||||||    
T  14755233 ttagacaagtgtaccaaatcgtttatcaagtagtaaagtgagaagtagagtatcatatccaca 14755171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 16849253 - 16849323
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaa 75  Q
    |||||| |||||||||||||||| ||||| | ||| |||| ||||||||||||| | |||||||| |||||    
T  16849253 aatttattcttatctatttattacatgtgttgtttttattgaaaattgaaggtatttttggaaagggaaaa 16849323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 21305660 - 21305730
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaa 75  Q
    |||||| |||||||||||||||| ||||| |||||||||| |||||||| || ||| ||  ||||||||||    
T  21305660 aatttattcttatctatttattacatgtgttatttgtattgaaaattgagggcaattttaaaaagagaaaa 21305730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 235
Target Start/End: Complemental strand, 1848325 - 1848269
Alignment:
Q  178 ggcaagtgtatcaaatcgttaccaagtaataaagtgataagtagagtatcatatccac 235  Q
    |||||||||| ||||| || ||||||||||||||||||||||| |||||| |||||||    
T  1848325 ggcaagtgtaccaaattgt-accaagtaataaagtgataagtacagtatcgtatccac 1848269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 132
Target Start/End: Original strand, 4676395 - 4676428
Alignment:
Q  99 gggttattttctttatatatagtatagatataaa 132  Q
    ||||||||||||||||||||||||||||||||||    
T  4676395 gggttattttctttatatatagtatagatataaa 4676428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 6474973 - 6475026
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggta 58  Q
    |||||| |||||||||||||||| |||||  ||||||||| |||||||||||||    
T  6474973 aatttattcttatctatttattacatgtgtcatttgtatttaaaattgaaggta 6475026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 201 - 238
Target Start/End: Original strand, 11803103 - 11803140
Alignment:
Q  201 aagtaataaagtgataagtagagtatcatatccacagg 238  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  11803103 aagtaataaagtgataagtagagtatcgtatccacagg 11803140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 18449237 - 18449298
Alignment:
Q  174 tttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatcca 234  Q
    |||||||||||||||||||| ||| ||||||||||||||||| ||||| | |||| ||||||    
T  18449237 tttaggcaagtgtatcaaattgtttaccaagtaataaagtgagaagtataatatcgtatcca 18449298  T

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Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 175 - 227
Target Start/End: Original strand, 21230308 - 21230361
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatc 227  Q
    |||||||||| |||||||||||| ||||| ||||||| ||||||||||||||||    
T  21230308 ttaggcaagtatatcaaatcgtttaccaaataataaaatgataagtagagtatc 21230361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 21993697 - 21993770
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagt 78  Q
    |||||| ||||||| |||||||| || || |||||||||| |||||||| |||| | || ||||||||||||||    
T  21993697 aatttattcttatcaatttattacatctgttatttgtattgaaaattgagggtatttttagaaagagaaaaagt 21993770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 27724972 - 27725037
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaaga 70  Q
    |||||| |||||||||||| ||| || || ||||||||||||||||||| |||| | |||||||||    
T  27724972 aatttattcttatctatttgttacatatgttatttgtattaaaaattgagggtatttttggaaaga 27725037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 36610098 - 36610171
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagt 78  Q
    |||||| | |||||||||| ||| ||||| |||||||||| ||||||||| ||| | ||| |||||||||||||    
T  36610098 aatttatttttatctatttgttacatgtgttatttgtattgaaaattgaatgtatttttgaaaagagaaaaagt 36610171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 45001134 - 45001187
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggta 58  Q
    |||||| |||||||||||||||| ||||  |||||||||| |||||||||||||    
T  45001134 aatttattcttatctatttattacatgtattatttgtattgaaaattgaaggta 45001187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 238
Target Start/End: Complemental strand, 11221263 - 11221203
Alignment:
Q  179 gcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagg 238  Q
    ||||||||| ||||||||| || |||||||||| |||||||||||||||  ||||||||||    
T  11221263 gcaagtgtaccaaatcgtttactaagtaataaattgataagtagagtattgtatccacagg 11221203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 236
Target Start/End: Original strand, 16365707 - 16365763
Alignment:
Q  181 aagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    ||||||| ||||||||| ||||||||||||||| | |||||||||||| ||||||||    
T  16365707 aagtgtaccaaatcgtttaccaagtaataaagtaaaaagtagagtatcgtatccaca 16365763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 238
Target Start/End: Original strand, 1584541 - 1584603
Alignment:
Q  175 ttaggcaagtgtatcaaatcgttaccaagtaataaagtgataagtagagtatcatatccacagg 238  Q
    ||||||||||||| |||    |||||||||||||||||||||||| ||||||| ||||||||||    
T  1584541 ttaggcaagtgtaccaatcatttaccaagtaataaagtgataagt-gagtatcgtatccacagg 1584603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 217
Target Start/End: Original strand, 7782556 - 7782599
Alignment:
Q  174 tttaggcaagtgtatcaaatcgttaccaagtaataaagtgataa 217  Q
    ||||||| |||||| |||||||||||| ||||||||||||||||    
T  7782556 tttaggcgagtgtaccaaatcgttacccagtaataaagtgataa 7782599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 236
Target Start/End: Complemental strand, 9866644 - 9866582
Alignment:
Q  174 tttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||| ||||||||| ||||| ||| ||||| |||||||||| ||||||||||||||||||||||    
T  9866644 tttacgcaagtgtaccaaattgtttaccaaataataaagtg-taagtagagtatcatatccaca 9866582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 236
Target Start/End: Original strand, 9916561 - 9916624
Alignment:
Q  174 tttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    ||||||||||| || |||||| || |||| |||||||||| |||||||||||||| ||||||||    
T  9916561 tttaggcaagtataccaaatcatttaccacgtaataaagtaataagtagagtatcgtatccaca 9916624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 236
Target Start/End: Original strand, 9924473 - 9924536
Alignment:
Q  174 tttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    ||||||||||| || |||||| || |||| |||||||||| |||||||||||||| ||||||||    
T  9924473 tttaggcaagtataccaaatcatttaccacgtaataaagtaataagtagagtatcgtatccaca 9924536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 232
Target Start/End: Original strand, 16306677 - 16306748
Alignment:
Q  162 actgatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatc 232  Q
    |||||||  ||| |||| ||||||||| ||||| || | |||||||||||||||||||||||||||| ||||    
T  16306677 actgatggtcggattagacaagtgtataaaatcctttaacaagtaataaagtgataagtagagtatcgtatc 16306748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 236
Target Start/End: Complemental strand, 26134851 - 26134789
Alignment:
Q  174 tttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    ||||| |||||||| ||||||||| ||||||||||||| || ||||||||||||| ||||||||    
T  26134851 tttagacaagtgtaccaaatcgtttaccaagtaataaaatg-taagtagagtatcgtatccaca 26134789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 78
Target Start/End: Original strand, 27241320 - 27241383
Alignment:
Q  15 tatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagt 78  Q
    ||||||||| ||| ||||| |||||||||| |||||||| || | | |||||||||||||||||    
T  27241320 tatctatttgttacatgtgttatttgtattgaaaattgagggcatttttggaaagagaaaaagt 27241383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 29675071 - 29675024
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattg 52  Q
    |||||| |||||||||||| ||| ||||| ||||||||||||||||||    
T  29675071 aatttattcttatctatttgttacatgtgttatttgtattaaaaattg 29675024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 127
Target Start/End: Complemental strand, 31176664 - 31176549
Alignment:
Q  12 tcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgggttattttctt 111  Q
    |||||||||||| ||| ||||| ||||||||||  ||||||| || | | ||||| | | |||||||| || ||||| | |  |||||| || |||||||    
T  31176664 tcttatctatttgttacatgtgttatttgtattccaaattgagggcatttttggagaaaaaaaaagttagcccaaaagagcttaaacggattgttttctt 31176565  T
Q  112 tatatatagtatagat 127  Q
    | ||||||||||||||    
T  31176564 tgtatatagtatagat 31176549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 41385928 - 41385987
Alignment:
Q  19 tatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagt 78  Q
    ||||| ||||||||| |||||||||||||| |||| |||||| ||| ||||| |||||||    
T  41385928 tatttgttatatgtgttatttgtattaaaagttgatggtaattttgaaaagataaaaagt 41385987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 232
Target Start/End: Original strand, 1587677 - 1587735
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatc 232  Q
    |||||||| |||| ||||||||| || ||||| ||||||||||| ||||||||||||||    
T  1587677 ttaggcaaatgtaccaaatcgtttactaagtagtaaagtgataattagagtatcatatc 1587735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 1872781 - 1872843
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    ||||||||||||  ||||||||| || |||||||| | |||||||||||||||| ||||||||    
T  1872781 ttaggcaagtgtgacaaatcgttcactaagtaatacaatgataagtagagtatcgtatccaca 1872843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 5108550 - 5108623
Alignment:
Q  163 ctgatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||||||| || || |||||||||| |||||  || |||||||||||||||| ||||||||||||| ||||||||    
T  5108550 ctgatgtgtggatttggcaagtgtaccaaattatttaccaagtaataaagtg-taagtagagtatcgtatccaca 5108623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 6013589 - 6013651
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    ||||||||||||| |||||| || | |||||| | ||||||||||||||||||| ||||||||    
T  6013589 ttaggcaagtgtaccaaatcatttatcaagtacttaagtgataagtagagtatcgtatccaca 6013651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 236
Target Start/End: Complemental strand, 7492358 - 7492304
Alignment:
Q  182 agtgtatcaaatcgttaccaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||||| ||||| |||| | ||||||||| |||||||||||||||| ||||||||    
T  7492358 agtgtaccaaattgttatccagtaataaaatgataagtagagtatcgtatccaca 7492304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 236
Target Start/End: Complemental strand, 7748184 - 7748127
Alignment:
Q  178 ggcaagtgtatcaaatcgttaccaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||||||||||||||||||||   || ||||||||||||||| ||||||| ||||||||    
T  7748184 ggcaagtgtatcaaatcgttatttagaaataaagtgataagt-gagtatcgtatccaca 7748127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 236
Target Start/End: Original strand, 8877441 - 8877479
Alignment:
Q  198 accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||||||||||| ||||||||||||||||| ||||||||    
T  8877441 accaagtaataaggtgataagtagagtatcgtatccaca 8877479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 236
Target Start/End: Complemental strand, 10584589 - 10584527
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||| |||||||| ||||||||| | ||||||||||||||||||| | |||||| ||||||||    
T  10584589 ttagacaagtgtaccaaatcgtttatcaagtaataaagtgataagcaaagtatcgtatccaca 10584527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 226
Target Start/End: Complemental strand, 18369061 - 18369031
Alignment:
Q  196 ttaccaagtaataaagtgataagtagagtat 226  Q
    |||||||||||||||||||||||||||||||    
T  18369061 ttaccaagtaataaagtgataagtagagtat 18369031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 18661590 - 18661648
Alignment:
Q  179 gcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    ||||||||| ||||||||| |||||  ||||||||||||||||||||||  ||||||||    
T  18661590 gcaagtgtaccaaatcgtttaccaaacaataaagtgataagtagagtattgtatccaca 18661648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 20536238 - 20536188
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaag 55  Q
    |||||| |||||||||||| ||| ||||| |||||||||| ||||||||||    
T  20536238 aatttattcttatctatttgttagatgtgttatttgtattgaaaattgaag 20536188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 127
Target Start/End: Complemental strand, 34729065 - 34728943
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgggtta 104  Q
    |||||| |||||||||||| ||| ||||| ||||| |||| |||||||| || | | ||| |||||||||||||  |  ||||| |    ||| | ||||    
T  34729065 aatttattcttatctatttgttacatgtgttatttatattgaaaattgagggcatttttgcaaagagaaaaagtcagttcaaaagagttgaaatgagtta 34728966  T
Q  105 ttttctttatatatagtatagat 127  Q
    ||||||||||||||||| |||||    
T  34728965 ttttctttatatatagtttagat 34728943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 41755561 - 41755607
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaatt 51  Q
    |||||| |||||||||||| ||||||||| |||||||||| ||||||    
T  41755561 aatttattcttatctatttgttatatgtgttatttgtatttaaaatt 41755607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 2750150 - 2750215
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaaga 70  Q
    |||||| |||||||||||| ||| || || ||||| |||| ||||||||||||| | |||||||||    
T  2750150 aatttattcttatctatttgttacatatgttatttatattgaaaattgaaggtatttttggaaaga 2750215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 21094211 - 21094276
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaaga 70  Q
    |||||| |||||||| ||| ||| |||| ||||||||||| |||||||| |||| | |||||||||    
T  21094211 aatttattcttatctgtttgttacatgtactatttgtattgaaaattgagggtatttttggaaaga 21094276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 21766399 - 21766444
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaat 50  Q
    |||||| |||||||||||| ||| ||||| ||||||||||||||||    
T  21766399 aatttattcttatctatttgttacatgtgttatttgtattaaaaat 21766444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 23093305 - 23093357
Alignment:
Q  174 tttaggcaagtgtatcaaatcg-ttaccaagtaataaagtgataagtagagtat 226  Q
    |||||||||||||| ||||||| |||| ||||||||||||| ||||||||||||    
T  23093305 tttaggcaagtgtaccaaatcgtttactaagtaataaagtg-taagtagagtat 23093357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 25834395 - 25834322
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagt 78  Q
    |||||| |||||||||||| ||| || || |||||||||| |||||| |||| | | ||| |||||||||||||    
T  25834395 aatttattcttatctatttgttacatatgttatttgtattgaaaatttaaggcatttttgaaaagagaaaaagt 25834322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 226
Target Start/End: Original strand, 4986551 - 4986603
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtat 226  Q
    |||| |||||||| ||||||||| |||||||||||||||| | ||||||||||    
T  4986551 ttagacaagtgtaccaaatcgtttaccaagtaataaagtgctgagtagagtat 4986603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 226
Target Start/End: Original strand, 4990649 - 4990701
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtat 226  Q
    |||| |||||||| ||||||||| |||||||||||||||| | ||||||||||    
T  4990649 ttagacaagtgtaccaaatcgtttaccaagtaataaagtgctgagtagagtat 4990701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 7525682 - 7525634
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattga 53  Q
    |||||| |||||||||||| ||| ||||| |||||||||| ||||||||    
T  7525682 aatttattcttatctatttgttacatgtgttatttgtattgaaaattga 7525634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 232
Target Start/End: Original strand, 21227197 - 21227233
Alignment:
Q  196 ttaccaagtaataaagtgataagtagagtatcatatc 232  Q
    |||| ||||||||||||||||||||||||||| ||||    
T  21227197 ttacaaagtaataaagtgataagtagagtatcgtatc 21227233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #91
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 21912581 - 21912525
Alignment:
Q  177 aggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatc 232  Q
    ||||||||||||||||| ||| | ||| |||||||||||||||| ||||||| ||||    
T  21912581 aggcaagtgtatcaaattgtttatcaaataataaagtgataagttgagtatcgtatc 21912525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #92
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 78
Target Start/End: Complemental strand, 23050342 - 23050274
Alignment:
Q  10 actcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagt 78  Q
    |||||| ||||||| ||| ||||  |||||||||| |||||||| | || | |||||||||||||||||    
T  23050342 actcttttctatttgttacatgtattatttgtatttaaaattgaggatatttttggaaagagaaaaagt 23050274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #93
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 27241200 - 27241248
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattga 53  Q
    |||||| |||||||||||| ||| ||||| |||||||||| ||||||||    
T  27241200 aatttattcttatctatttgttacatgtgttatttgtattgaaaattga 27241248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #94
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 129
Target Start/End: Complemental strand, 27509408 - 27509380
Alignment:
Q  101 gttattttctttatatatagtatagatat 129  Q
    |||||||||||||||||||||||||||||    
T  27509408 gttattttctttatatatagtatagatat 27509380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #95
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 37546596 - 37546644
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattga 53  Q
    |||||| |||||||||||| ||| ||||| |||||||||| ||||||||    
T  37546596 aatttattcttatctattttttacatgtgttatttgtatttaaaattga 37546644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 72; Significance: 7e-33; HSPs: 62)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 23124301 - 23124178
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgg 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||||| | |||||| |||||||||||||||||   | ||||| | |||||||      
T  23124301 tttgaatttactcttatctatttgttatatgtgctatttgtattgaaaattaagggtaattttggaaagagaaaaagtcatcccaaaagaaccaaaacat 23124202  T
Q  101 gttattttctttatatatagtata 124  Q
    ||||||||||||||||||||||||    
T  23124201 gttattttctttatatatagtata 23124178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 9341219 - 9341345
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgg 100  Q
    |||||||||| |||||||||||||||||||||  ||||||||||||||||||| |||||| || |||||||||||||||  | ||||| |  ||| ||      
T  9341219 tttgaatttattcttatctatttattatatgtattatttgtattaaaaattgagggtaattttagaaagagaaaaagttatcccaaaagagtcaacacat 9341318  T
Q  101 gttattttctttatatatagtatagat 127  Q
    | |||||||||||||||||||||||||    
T  9341319 gctattttctttatatatagtatagat 9341345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 162 - 236
Target Start/End: Complemental strand, 21672551 - 21672476
Alignment:
Q  162 actgatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||||||||||| ||||||||||| | ||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  21672551 actgatgtgcggattaggcaagtgcaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccaca 21672476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 164 - 238
Target Start/End: Original strand, 23143707 - 23143782
Alignment:
Q  164 tgatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagg 238  Q
    |||||||||| ||||||||||||| |||||| || ||||| |||||||||||||||||||||||||||||||||||    
T  23143707 tgatgtgcggattaggcaagtgtaccaaatcatttaccaattaataaagtgataagtagagtatcatatccacagg 23143782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 162 - 236
Target Start/End: Complemental strand, 21679967 - 21679892
Alignment:
Q  162 actgatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||||||||||| ||||||||||| | ||||||||| || ||||||||||||||||||||||||||| ||||||||    
T  21679967 actgatgtgcggattaggcaagtgcaccaaatcgtttactaagtaataaagtgataagtagagtatcgtatccaca 21679892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 9726018 - 9726080
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  9726018 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccaca 9726080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 167 - 236
Target Start/End: Original strand, 17729140 - 17729210
Alignment:
Q  167 tgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    ||||||| ||||| ||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  17729140 tgtgcggattaggtaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccaca 17729210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 9894609 - 9894706
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaac 98  Q
    |||||||||||| |||||||||| ||||||||| || ||||||| ||| |||| |||||| || ||||||||||||| | |||||||| | |||||||    
T  9894609 tttgaatttacttttatctatttcttatatgtgatagttgtattgaaagttgagggtaatttttgaaagagaaaaaggttgcacaaaagagccaaaac 9894706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 164 - 236
Target Start/End: Complemental strand, 12183445 - 12183372
Alignment:
Q  164 tgatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||||||||| ||| ||||||||| ||||||||| ||||||||||||||||||||||| |||||| ||||||||    
T  12183445 tgatgtgcggattatgcaagtgtaccaaatcgtttaccaagtaataaagtgataagtacagtatcgtatccaca 12183372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 130
Target Start/End: Original strand, 32333480 - 32333605
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgggtta 104  Q
    |||||| |||||| ||||| ||| || || |||||||||| |||||||| || | | ||| |||||||||||||  || ||||||| | |||| || |||    
T  32333480 aatttattcttatttatttgttacatatgttatttgtattgaaaattgagggcatttttgaaaagagaaaaagtcagctcaaaaaagctaaaagggatta 32333579  T
Q  105 ttttctttatatatagtatagatata 130  Q
    |||||||||||||||||||| |||||    
T  32333580 ttttctttatatatagtataaatata 32333605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 26306460 - 26306578
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagag-aaaaagttggcacaaaaaatccaaaacg 99  Q
    ||||||||||||||||||||||| |||||| || |||||||||| |||||||| |||||| || ||||| | |||||||   | ||||| |  ||||| |    
T  26306460 tttgaatttactcttatctatttgttatatttgttatttgtatttaaaattgagggtaat-ttagaaagggaaaaaagtcaactcaaaagagacaaaatg 26306558  T
Q  100 ggttattttctttatatata 119  Q
    ||||||||||||||||||||    
T  26306559 ggttattttctttatatata 26306578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 162 - 227
Target Start/End: Complemental strand, 14079560 - 14079494
Alignment:
Q  162 actgatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatc 227  Q
    |||||||||||  ||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||    
T  14079560 actgatgtgcgaattaggcaagtgtaccaaatcgtttaccaagttataaagtgataagtagagtatc 14079494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 175 - 236
Target Start/End: Complemental strand, 27737792 - 27737730
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||||||||||||  |||||||| ||||||||||||||||||||||||||||||||| |||||    
T  27737792 ttaggcaagtgtactaaatcgtttaccaagtaataaagtgataagtagagtatcatacccaca 27737730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 164 - 227
Target Start/End: Original strand, 5624625 - 5624689
Alignment:
Q  164 tgatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatc 227  Q
    |||||||||  |||||||| |||| ||||||||| ||||||||||||||||||||||||||||||    
T  5624625 tgatgtgcgtattaggcaaatgtaccaaatcgtttaccaagtaataaagtgataagtagagtatc 5624689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 196 - 236
Target Start/End: Complemental strand, 22566243 - 22566203
Alignment:
Q  196 ttaccaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  22566243 ttaccaagtaataaagtgataagtagagtatcatatccaca 22566203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 13240907 - 13240982
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaa 76  Q
    ||||||||||||||||||||||| |||||| || |||||||||| ||| |||||| || | || ||||||||||||    
T  13240907 tttgaatttactcttatctatttgttatatatgttatttgtattgaaagttgaagttagttttagaaagagaaaaa 13240982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 8241273 - 8241335
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    ||||||||||||| ||||||||| || |||||| |||||||||||||||||||| ||||||||    
T  8241273 ttaggcaagtgtaccaaatcgtttacgaagtaagaaagtgataagtagagtatcgtatccaca 8241335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 127
Target Start/End: Complemental strand, 14965108 - 14964986
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgggtta 104  Q
    |||||| |||||||||||| ||| |||||  ||||||||| ||||||||||| | | || |||||||||||||      ||||| | |  ||| ||||||    
T  14965108 aatttattcttatctatttgttacatgtgtaatttgtattgaaaattgaaggcatttttagaaagagaaaaagacattccaaaagagctgaaaagggtta 14965009  T
Q  105 ttttctttatatatagtatagat 127  Q
    |||||||||||||||||||||||    
T  14965008 ttttctttatatatagtatagat 14964986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 21907428 - 21907490
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||||||||| || ||||||||| ||||||||||||||||||||||| |||||| ||||||||    
T  21907428 ttaggcaagtataccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 21907490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 175 - 236
Target Start/End: Complemental strand, 25927406 - 25927344
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    ||||||||||||| |||| |||| ||||||||||||||||||||||||| |||| ||||||||    
T  25927406 ttaggcaagtgtaccaaaacgtttaccaagtaataaagtgataagtagaatatcgtatccaca 25927344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 9516786 - 9516843
Alignment:
Q  180 caagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||||||| ||||||||| ||| |||||||||||||||||||||||||| ||||||||    
T  9516786 caagtgtaccaaatcgtttacctagtaataaagtgataagtagagtatcgtatccaca 9516843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 175 - 227
Target Start/End: Complemental strand, 21932155 - 21932102
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatc 227  Q
    ||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||    
T  21932155 ttaggcaagtgtaccaaattgtttaccaagtaataaagtgataagtagagtatc 21932102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 31994387 - 31994310
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagt 78  Q
    |||||||||||| |||| ||||| ||||||||| |||| ||||||||| |||| | |||| ||| |||||||||||||    
T  31994387 tttgaatttacttttatttatttgttatatgtgttattagtattaaaagttgaggataattttgaaaagagaaaaagt 31994310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 18075502 - 18075430
Alignment:
Q  164 tgatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccac 235  Q
    |||||||||| ||||| |||||||  |||| ||| ||||||||||||||||||||| |||||||| |||||||    
T  18075502 tgatgtgcggattaggaaagtgtacgaaattgtttaccaagtaataaagtgataagcagagtatcgtatccac 18075430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 175 - 226
Target Start/End: Complemental strand, 20145163 - 20145111
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtat 226  Q
    ||||||||||||| ||||| ||| |||||||||||||||||||||||||||||    
T  20145163 ttaggcaagtgtaccaaattgttcaccaagtaataaagtgataagtagagtat 20145111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 175 - 226
Target Start/End: Original strand, 22187676 - 22187728
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtat 226  Q
    ||||||||||||| ||||| ||| |||||||||||||||||||||||||||||    
T  22187676 ttaggcaagtgtaccaaattgttcaccaagtaataaagtgataagtagagtat 22187728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 181 - 232
Target Start/End: Complemental strand, 23844562 - 23844510
Alignment:
Q  181 aagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatc 232  Q
    ||||||| ||||||||| ||||||||||||| |||||||||||||||||||||    
T  23844562 aagtgtaccaaatcgtttaccaagtaataaaatgataagtagagtatcatatc 23844510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 234
Target Start/End: Complemental strand, 23645861 - 23645810
Alignment:
Q  184 tgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatcca 234  Q
    |||| ||||||||| |||||||||||||||||||||||||||||| ||||||    
T  23645861 tgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatcca 23645810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 232
Target Start/End: Complemental strand, 7543063 - 7543005
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatc 232  Q
    |||||||| |||||||||| ||| ||||||||||||||||||||||| |||||| ||||    
T  7543063 ttaggcaaatgtatcaaattgtttaccaagtaataaagtgataagtaaagtatcgtatc 7543005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 11176946 - 11177008
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    ||||||||||||| | ||||||| ||| |||| ||||||||||||||||||||| ||||||||    
T  11176946 ttaggcaagtgtacccaatcgtttaccgagtactaaagtgataagtagagtatcgtatccaca 11177008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 196 - 238
Target Start/End: Complemental strand, 22410408 - 22410366
Alignment:
Q  196 ttaccaagtaataaagtgataagtagagtatcatatccacagg 238  Q
    ||||||||||||||| |||||||||||||||| ||||||||||    
T  22410408 ttaccaagtaataaaatgataagtagagtatcgtatccacagg 22410366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 196 - 234
Target Start/End: Complemental strand, 23232064 - 23232026
Alignment:
Q  196 ttaccaagtaataaagtgataagtagagtatcatatcca 234  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  23232064 ttaccaagtaataaagtgataagtagggtatcatatcca 23232026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 232
Target Start/End: Complemental strand, 20005977 - 20005924
Alignment:
Q  180 caagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatc 232  Q
    |||||||| ||||||||| ||||||||||||||||||||| |||||||| ||||    
T  20005977 caagtgtaccaaatcgtttaccaagtaataaagtgataagcagagtatcgtatc 20005924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 31204265 - 31204378
Alignment:
Q  5 aatttactcttatctattt-attatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgggtt 103  Q
    ||||||||| ||||||||| |||||||||| |||| | ||| ||||||||  ||||| ||| |||  ||||||||  ||  ||||||| ||||||  |||    
T  31204265 aatttactcctatctatttgattatatgtgatattagcattgaaaattgagagtaattttgaaaactgaaaaagtcagcctaaaaaattcaaaacatgtt 31204364  T
Q  104 attttctttatata 117  Q
    ||||||||||||||    
T  31204365 attttctttatata 31204378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 14426474 - 14426398
Alignment:
Q  3 tgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaa-tcttggaaagagaaaaagt 78  Q
    ||||||||||||||||||||| ||| ||||| |||||||||| ||| || | ||||| | ||| |||||||||||||    
T  14426474 tgaatttactcttatctatttgttacatgtgttatttgtattgaaagttaagggtaatttttgaaaagagaaaaagt 14426398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 227
Target Start/End: Complemental strand, 17299925 - 17299881
Alignment:
Q  184 tgtatcaaatcgtt-accaagtaataaagtgataagtagagtatc 227  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||    
T  17299925 tgtagcaaatcgtttaccaagtaataaagtgataagtagagtatc 17299881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 236
Target Start/End: Complemental strand, 20722279 - 20722218
Alignment:
Q  174 tttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    ||||||||| |||| ||||||||| |||||||||||||||  |||||||||||| |||||||||    
T  20722279 tttaggcaaatgtaccaaatcgtttaccaagtaataaagt--taagtagagtataatatccaca 20722218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 228
Target Start/End: Original strand, 26587622 - 26587670
Alignment:
Q  181 aagtgtatcaaatcgt-taccaagtaataaagtgataagtagagtatca 228  Q
    |||||||||||||||| ||||| ||||||||||||||||||| ||||||    
T  26587622 aagtgtatcaaatcgtataccacgtaataaagtgataagtagggtatca 26587670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 27226980 - 27226932
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattga 53  Q
    |||||| |||||||||||||||| ||||| |||||||||| ||||||||    
T  27226980 aatttattcttatctatttattacatgtgttatttgtattgaaaattga 27226932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 30254532 - 30254596
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaag 69  Q
    |||||||| |||| ||||| ||||||||| ||||||||||||||||| | |||||| || |||||    
T  30254532 aatttacttttatttatttgttatatgtgttatttgtattaaaaattaagggtaattttagaaag 30254596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 76
Target Start/End: Complemental strand, 2959355 - 2959304
Alignment:
Q  25 ttatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaa 76  Q
    ||||||||||||||| |||||||| ||||||||||| ||| |||||| ||||    
T  2959355 ttatatgtgctatttatattaaaagttgaaggtaattttgaaaagaggaaaa 2959304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 6001572 - 6001619
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattg 52  Q
    |||||| |||||||||||||||| ||||| |||||||||| |||||||    
T  6001572 aatttattcttatctatttattacatgtgttatttgtattgaaaattg 6001619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 11646365 - 11646254
Alignment:
Q  18 ctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgggttattttctttatata 117  Q
    |||||| ||||||||| |||||||||| ||| || | |||||| ||| |||||||||||||   | ||||  |  ||||||   ||||||||||||| ||    
T  11646365 ctatttgttatatgtgttatttgtattgaaatttaagggtaattttgaaaagagaaaaagtcaacccaaatgaggcaaaacatattattttctttatgta 11646266  T
Q  118 tagtatagatat 129  Q
    ||||||||||||    
T  11646265 tagtatagatat 11646254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 17942339 - 17942296
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtatt 44  Q
    |||||||| ||||||||||||||||||||| || ||||||||||    
T  17942339 tttgaattcactcttatctatttattatatttgttatttgtatt 17942296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 227
Target Start/End: Original strand, 19244603 - 19244634
Alignment:
Q  196 ttaccaagtaataaagtgataagtagagtatc 227  Q
    ||||||||||||||||||||||||||||||||    
T  19244603 ttaccaagtaataaagtgataagtagagtatc 19244634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 28188735 - 28188782
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattg 52  Q
    |||||| |||||||||||| ||| ||||| ||||||||||||||||||    
T  28188735 aatttattcttatctatttgttacatgtgttatttgtattaaaaattg 28188782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 232
Target Start/End: Complemental strand, 28586134 - 28586075
Alignment:
Q  174 tttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatc 232  Q
    ||||| ||||| || ||||||||| ||| ||||||||| |||||||||||||||||||||    
T  28586134 tttagacaagtataccaaatcgtttaccgagtaataaattgataagtagagtatcatatc 28586075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 30233171 - 30233100
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaa 76  Q
    |||||| |||||||||||| |||  |||| ||||||||||||||||||| | || | ||| |||||||||||    
T  30233171 aatttattcttatctatttgttacgtgtgttatttgtattaaaaattgaggctatttttgaaaagagaaaaa 30233100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 4965751 - 4965797
Alignment:
Q  14 ttatctatttattatatgtgctatttgtattaaaaattgaaggtaat 60  Q
    |||||||||| |||||||||||||||||||| ||| |||| ||||||    
T  4965751 ttatctatttgttatatgtgctatttgtattgaaagttgagggtaat 4965797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 232
Target Start/End: Original strand, 15466366 - 15466423
Alignment:
Q  175 ttaggcaagtgtatcaaatcg-ttaccaagtaataaagtgataagtagagtatcatatc 232  Q
    ||||||||||||| ||||||| |||||||||||||||||| || |||||||||| ||||    
T  15466366 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtg-tacgtagagtatcgtatc 15466423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 34352592 - 34352642
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaag 55  Q
    |||||| | |||||||||||||| ||||| |||||||||| ||||||||||    
T  34352592 aatttatttttatctatttattacatgtgttatttgtattgaaaattgaag 34352642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 14912272 - 14912301
Alignment:
Q  1 tttgaatttactcttatctatttattatat 30  Q
    ||||||||||||||||||||||||||||||    
T  14912272 tttgaatttactcttatctatttattatat 14912301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 28548570 - 28548525
Alignment:
Q  7 tttactcttatctatttattatatgtgctatttgtattaaaaattg 52  Q
    |||| |||||||||||||||| ||||| |||||||||| |||||||    
T  28548570 tttattcttatctatttattacatgtgttatttgtattgaaaattg 28548525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 1190441 - 1190393
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattga 53  Q
    |||||| |||||||||||| ||| ||||| |||||||||| ||||||||    
T  1190441 aatttattcttatctatttgttacatgtgttatttgtattgaaaattga 1190393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 226
Target Start/End: Original strand, 2586717 - 2586769
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtat 226  Q
    ||||||||||||| ||||| ||| |||||||||| |||||||||||| |||||    
T  2586717 ttaggcaagtgtaccaaattgtttaccaagtaatgaagtgataagtatagtat 2586769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 121
Target Start/End: Original strand, 14691079 - 14691111
Alignment:
Q  89 aatccaaaacgggttattttctttatatatagt 121  Q
    |||||||||||| ||||||||||||||||||||    
T  14691079 aatccaaaacggcttattttctttatatatagt 14691111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 219
Target Start/End: Complemental strand, 20002484 - 20002440
Alignment:
Q  176 taggcaagtgtatcaaatcg-ttaccaagtaataaagtgataagt 219  Q
    |||||||||||| ||||||  ||||||||||||||||||||||||    
T  20002484 taggcaagtgtaccaaatcaattaccaagtaataaagtgataagt 20002440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 76
Target Start/End: Original strand, 21254714 - 21254778
Alignment:
Q  12 tcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaa 76  Q
    |||||||||||| ||| ||||| |||||| ||| |||||| |||||| | ||||||| |||||||    
T  21254714 tcttatctatttgttacatgtgttatttgcattgaaaattaaaggtatttttggaaaaagaaaaa 21254778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 24062161 - 24062117
Alignment:
Q  7 tttactcttatctatttattatatgtgctatttgtattaaaaatt 51  Q
    |||| |||||||||||||||| ||||| |||||||||| ||||||    
T  24062161 tttattcttatctatttattacatgtgttatttgtattgaaaatt 24062117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 238
Target Start/End: Original strand, 24251516 - 24251576
Alignment:
Q  179 gcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagg 238  Q
    ||||||||||||| ||||| ||||||||||||||| ||||| |||| |||  |||||||||    
T  24251516 gcaagtgtatcaattcgtttaccaagtaataaagtcataagcagaggatcgcatccacagg 24251576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 236
Target Start/End: Complemental strand, 28933733 - 28933701
Alignment:
Q  204 taataaagtgataagtagagtatcatatccaca 236  Q
    |||||||||||||||||||||||| ||||||||    
T  28933733 taataaagtgataagtagagtatcgtatccaca 28933701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 216
Target Start/End: Complemental strand, 34092363 - 34092327
Alignment:
Q  181 aagtgtatcaaatcgtt-accaagtaataaagtgata 216  Q
    ||||||||||||||||| |||||||||||||||||||    
T  34092363 aagtgtatcaaatcgtttaccaagtaataaagtgata 34092327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 1e-28; HSPs: 66)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 164 - 236
Target Start/End: Original strand, 25618542 - 25618614
Alignment:
Q  164 tgatgtgcggtttaggcaagtgtatcaaatcgttaccaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25618542 tgatgtgcggattaggcaagcgtatcaaatcgttaccaagtaataaagtgataagtagagtatcatatccaca 25618614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 27912939 - 27912812
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgg 100  Q
    ||||||||||||||||||||||| ||| ||||| | ||||||||||||||| | |||||| ||||||||||||||| |   | ||||| | |||||||      
T  27912939 tttgaatttactcttatctatttgttacatgtggtttttgtattaaaaatttagggtaattttggaaagagaaaaaatcatcccaaaagagccaaaacaa 27912840  T
Q  101 gttattttctttatatatagtatagata 128  Q
      ||||||||||||||||||||||||||    
T  27912839 actattttctttatatatagtatagata 27912812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 164 - 236
Target Start/End: Original strand, 15339223 - 15339296
Alignment:
Q  164 tgatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||||||||| ||||||||||||| |||||| || ||||||||||||||||| |||||||||||||||||||||    
T  15339223 tgatgtgcggattaggcaagtgtaccaaatcatttaccaagtaataaagtgaaaagtagagtatcatatccaca 15339296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 165 - 236
Target Start/End: Complemental strand, 29719344 - 29719272
Alignment:
Q  165 gatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    ||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||| |||| ||||||||    
T  29719344 gatgtgcggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagattatcgtatccaca 29719272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 42444440 - 42444369
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaa 76  Q
    ||||||||||||| ||||| |||||||||||||||||||| ||| ||||||||| | |||||||||||||||    
T  42444440 aatttactcttatttatttgttatatgtgctatttgtattgaaagttgaaggtatttttggaaagagaaaaa 42444369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 16039219 - 16039090
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgg 100  Q
    ||||||| |||||||||| |||| ||||||||| |||||||||| ||| |||| |||||| || |||||  |||||||  || ||||| |  ||||||      
T  16039219 tttgaatctactcttatcaatttgttatatgtgttatttgtattgaaagttgagggtaattttagaaaggaaaaaagtcagcccaaaagaatcaaaacat 16039120  T
Q  101 gttattttctttatatatagtatagatata 130  Q
    |||||||||| |||||||||||||| ||||    
T  16039119 gttattttctctatatatagtataggtata 16039090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 164 - 236
Target Start/End: Complemental strand, 25888334 - 25888261
Alignment:
Q  164 tgatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||||||||| ||||||||||||| ||||| ||| ||||||||||||||||||||||| |||||| ||||||||    
T  25888334 tgatgtgcggattaggcaagtgtaccaaattgtttaccaagtaataaagtgataagtacagtatcgtatccaca 25888261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 164 - 228
Target Start/End: Complemental strand, 20173411 - 20173347
Alignment:
Q  164 tgatgtgcggtttaggcaagtgtatcaaatcgttaccaagtaataaagtgataagtagagtatca 228  Q
    |||||||||| ||||| ||||||| |||||||||||||||| ||||||||||||| |||||||||    
T  20173411 tgatgtgcggattaggaaagtgtaccaaatcgttaccaagttataaagtgataagcagagtatca 20173347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 174 - 236
Target Start/End: Complemental strand, 8503174 - 8503111
Alignment:
Q  174 tttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||||||||||||| ||||||||| |||||||||||| ||||||||||||| ||||||||||||    
T  8503174 tttaggcaagtgtaccaaatcgtttaccaagtaataacgtgataagtagaggatcatatccaca 8503111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 178 - 236
Target Start/End: Complemental strand, 17743576 - 17743517
Alignment:
Q  178 ggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  17743576 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccaca 17743517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 178 - 236
Target Start/End: Complemental strand, 27909219 - 27909160
Alignment:
Q  178 ggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  27909219 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccaca 27909160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 37867505 - 37867430
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaa 76  Q
    ||||||||||||||||| ||||| ||||||||| ||||| |||| ||| |||| |||||| |||||||||||||||    
T  37867505 tttgaatttactcttatttatttgttatatgtgttatttttattgaaagttgagggtaattttggaaagagaaaaa 37867430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 175 - 236
Target Start/End: Complemental strand, 20174738 - 20174676
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    ||||| ||||||| ||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  20174738 ttaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcatttccaca 20174676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 196 - 238
Target Start/End: Original strand, 25196028 - 25196070
Alignment:
Q  196 ttaccaagtaataaagtgataagtagagtatcatatccacagg 238  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  25196028 ttaccaagtaataaagtgataagtagagtatcatatccacagg 25196070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 32085459 - 32085521
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    ||||| ||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  32085459 ttaggtaagtgtaccaaattgtttaccaagtaataaagtgataagtagagtatcatatccaca 32085521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 11382851 - 11382794
Alignment:
Q  180 caagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||    
T  11382851 caagtgtatcaaatcgtttaccagataataaagtgataagtagagtatcatatccaca 11382794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 72
Target Start/End: Complemental strand, 27649198 - 27649131
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagaga 72  Q
    |||||| |||||||||||| ||| |||||||||||||||| ||| |||| |||||| |||||||||||    
T  27649198 aatttattcttatctatttgttacatgtgctatttgtattgaaagttgagggtaattttggaaagaga 27649131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 31555701 - 31555832
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgg 100  Q
    ||||||||||| ||||| ||||| |||||| || |||||||||| ||||||||||||||| ||| |  |||||||| |  || ||||| |  ||| |  |    
T  31555701 tttgaatttacacttatttatttgttatatatgttatttgtattgaaaattgaaggtaattttgcatggagaaaaaataagcccaaaagagtcaagaaag 31555800  T
Q  101 gttattttctttatatatagtatagatataaa 132  Q
      ||||||||||||||||||||||||| ||||    
T  31555801 actattttctttatatatagtatagatttaaa 31555832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 128
Target Start/End: Complemental strand, 35156141 - 35156018
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgggtta 104  Q
    |||||| |||||||||||| ||| ||||| ||||||||||||||||||| || | | ||| ||||||||||||   || ||||| | |  |||  | |||    
T  35156141 aatttattcttatctatttgttacatgtgttatttgtattaaaaattgagggcatttttgaaaagagaaaaagccagcccaaaagagctgaaagagatta 35156042  T
Q  105 ttttctttatatatagtatagata 128  Q
    |||| |||||||||||||||||||    
T  35156041 ttttttttatatatagtatagata 35156018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 39809274 - 39809349
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaa 76  Q
    |||||||||||||||||||||||  |||||||||||||| |||| ||  |||| |||||| | |||||||||||||    
T  39809274 tttgaatttactcttatctatttgatatatgtgctatttatatttaatgttgagggtaatttgggaaagagaaaaa 39809349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 7603884 - 7604006
Alignment:
Q  6 atttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgggttat 105  Q
    ||||| |||||| ||||| ||| ||||  |||||||||| ||||||||||  | | |||||||||||||||||  || ||||| | | |||| |  ||||    
T  7603884 atttattcttatttatttgttacatgtattatttgtatttaaaattgaagccatttttggaaagagaaaaagtcagcccaaaagagctaaaatgatttat 7603983  T
Q  106 tttctttatatatagtatagata 128  Q
    |||||||||| ||||||||||||    
T  7603984 tttctttataaatagtatagata 7604006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 24836486 - 24836611
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgg 100  Q
    ||||||| || | ||||| |||| |||||||||||||||||||| ||| |||| |||||| ||||||| || ||||||   | | ||| |  ||||||      
T  24836486 tttgaatatatttttatcaatttgttatatgtgctatttgtattgaaagttgagggtaatattggaaatag-aaaagtcatcccgaaagagacaaaacat 24836584  T
Q  101 gttattttctttatatatagtatagat 127  Q
    |||||||||||||||||||||||||||    
T  24836585 gttattttctttatatatagtatagat 24836611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 25915390 - 25915516
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgg 100  Q
    |||||||||| |||||||||||||||||||||| ||||||| |  ||| |||| ||| || |||| ||||||||||       ||||| | | ||||  |    
T  25915390 tttgaatttattcttatctatttattatatgtgttatttgtttcgaaagttgagggtgattttgggaagagaaaaaaccaaaccaaaagagctaaaagag 25915489  T
Q  101 gttattttctttatatatagtatagat 127  Q
    |||||||||||||||||||||||||||    
T  25915490 gttattttctttatatatagtatagat 25915516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 178 - 223
Target Start/End: Original strand, 28925521 - 28925566
Alignment:
Q  178 ggcaagtgtatcaaatcgttaccaagtaataaagtgataagtagag 223  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||    
T  28925521 ggcaagtgtactaaatcgttaccaagtaataaagtgataagtagag 28925566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 164 - 227
Target Start/End: Complemental strand, 26603464 - 26603400
Alignment:
Q  164 tgatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatc 227  Q
    |||||||||| ||||||||||||| ||||| ||| | ||||||| ||||||||||||||||||||    
T  26603464 tgatgtgcggattaggcaagtgtaccaaattgtttatcaagtaaaaaagtgataagtagagtatc 26603400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 40499551 - 40499668
Alignment:
Q  12 tcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgggttattttctt 111  Q
    |||||||||||| ||| ||||  |||||||||| |||||||| || | | ||| |||||  ||||||   | ||||||||   ||| |||||||||||||    
T  40499551 tcttatctatttgttacatgtattatttgtattcaaaattgagggcatttttgaaaaga--aaaagtcatcccaaaaaatttgaaaggggttattttctt 40499648  T
Q  112 tatatatagtatagatataa 131  Q
    ||||||||||||||||||||    
T  40499649 tatatatagtatagatataa 40499668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 236
Target Start/End: Complemental strand, 8447153 - 8447091
Alignment:
Q  174 tttaggcaagtgtatcaaatcg-ttaccaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||||||||||||| ||||||| ||||||||||||||||| ||||||||| |||| ||||||||    
T  8447153 tttaggcaagtgtaccaaatcgtttaccaagtaataaagt-ataagtagattatcgtatccaca 8447091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 201 - 236
Target Start/End: Original strand, 27418389 - 27418424
Alignment:
Q  201 aagtaataaagtgataagtagagtatcatatccaca 236  Q
    ||||||||||||||||||||||||||||||||||||    
T  27418389 aagtaataaagtgataagtagagtatcatatccaca 27418424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 128
Target Start/End: Original strand, 31593723 - 31593846
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgggtta 104  Q
    |||||| |||||||||||| ||| | ||| |||||||||| |||| | ||||||   ||| |||||||||||||  ||  |||||| | ||||   |||     
T  31593723 aatttattcttatctatttgttacacgtgttatttgtattgaaaaataaaggtatgtttgaaaagagaaaaagtcagcctaaaaaaactaaaagaagttg 31593822  T
Q  105 ttttctttatatatagtatagata 128  Q
    ||||||||||||||||||||||||    
T  31593823 ttttctttatatatagtatagata 31593846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 40301810 - 40301932
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgg 100  Q
    ||||||||||||||||||||||| | ||||||||||||| |||| ||| |||  |||||  || |||| |||||||||  || || ||||  |||||       
T  40301810 tttgaatttactcttatctatttgtcatatgtgctatttatattgaaagttgggggtaaatttagaaaaagaaaaagtcagctcagaaaa-gcaaaatat 40301908  T
Q  101 gttattttctttatatatagtata 124  Q
     |||||||||||||||||||||||    
T  40301909 attattttctttatatatagtata 40301932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 3171650 - 3171768
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgg 100  Q
    ||||||||||||||||| ||||| ||||||||  ||||||| || ||||||  || |||| ||| |||||||||||||  ||  |||||   ||||||      
T  3171650 tttgaatttactcttatttatttgttatatgt--tatttgttttgaaaatt-cagataattttgaaaagagaaaaagtcagcttaaaaaggtcaaaacat 3171746  T
Q  101 gttattttctttatatatagta 122  Q
    ||||||||||||||||||||||    
T  3171747 gttattttctttatatatagta 3171768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 20950046 - 20950120
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagtt 79  Q
    |||||| |||||||||||| |||  |||| ||||||||||||||||||  |||||| ||| |||||| |||||||    
T  20950046 aatttattcttatctatttgttacctgtgttatttgtattaaaaattgtgggtaattttgaaaagagtaaaagtt 20950120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 21566045 - 21566095
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaatt 51  Q
    |||||||||||| |||| ||||| ||||||||| |||||||||||||||||    
T  21566045 tttgaatttactattatttatttgttatatgtgttatttgtattaaaaatt 21566095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 200 - 238
Target Start/End: Original strand, 25530469 - 25530507
Alignment:
Q  200 caagtaataaagtgataagtagagtatcatatccacagg 238  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  25530469 caagtaataaagtgataagtagagtatcgtatccacagg 25530507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 200 - 238
Target Start/End: Original strand, 25535296 - 25535334
Alignment:
Q  200 caagtaataaagtgataagtagagtatcatatccacagg 238  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  25535296 caagtaataaagtgataagtagagtatcgtatccacagg 25535334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 237
Target Start/End: Complemental strand, 31805014 - 31804940
Alignment:
Q  164 tgatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacag 237  Q
    |||||||||  ||||| ||||||| ||||| ||| ||||| |||||||||||||||||||||||  |||||||||    
T  31805014 tgatgtgcgaattaggaaagtgtaccaaattgtttaccaaataataaagtgataagtagagtattgtatccacag 31804940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 130
Target Start/End: Complemental strand, 27597159 - 27597034
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgggtta 104  Q
    |||||| |||||||||||||||| ||||| |||||||||| |||||| | || | | ||| ||||||||||||    | ||||| | |  ||   |||||    
T  27597159 aatttattcttatctatttattacatgtgttatttgtattgaaaattaagggcatttttgaaaagagaaaaagccaacccaaaagagctgaagtaggtta 27597060  T
Q  105 ttttctttatatatagtatagatata 130  Q
    |||||| |||||||||||||||||||    
T  27597059 ttttctatatatatagtatagatata 27597034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 1071337 - 1071409
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaa 73  Q
    ||||||| ||||||||||||||| ||| ||||| |||||||||| ||| |||| | |||  ||||||||||||    
T  1071337 tttgaatctactcttatctatttgttacatgtgttatttgtattgaaatttgatgttaaatttggaaagagaa 1071409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 237
Target Start/End: Complemental strand, 17635875 - 17635815
Alignment:
Q  178 ggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacag 237  Q
    ||||| |||| ||||||||| |||||||||||||| || |||||||| |||||||||||||    
T  17635875 ggcaaatgtagcaaatcgtttaccaagtaataaagagaaaagtagagaatcatatccacag 17635815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 24004777 - 24004888
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgggtta 104  Q
    |||||| |||||||||||| | | || ||||||||||||| |||||||| |||| | ||| |||||||||||||  || ||||||  |  ||| |||||     
T  24004777 aatttattcttatctatttgt-acatttgctatttgtattgaaaattgagggtatttttgaaaagagaaaaagtcagcccaaaaagactgaaaagggttg 24004875  T
Q  105 ttttctttatata 117  Q
    |||||||||||||    
T  24004876 ttttctttatata 24004888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 36817720 - 36817832
Alignment:
Q  19 tatttattatatgtgctatttgtattaaaaattgaagg-taatcttggaaagagaaaaagttggcacaaaaaatccaaaacgggttattttctttatata 117  Q
    ||||| ||||||||| |||||||||| | | ||| ||| |||| ||| ||||||||| |||   | ||||| |  ||||||  |||||||||||||||||    
T  36817720 tatttgttatatgtgatatttgtattgagagttgtagggtaattttgaaaagagaaagagtcacctcaaaataggcaaaacatgttattttctttatata 36817819  T
Q  118 tagtatagatata 130  Q
    |||||||||||||    
T  36817820 tagtatagatata 36817832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 41633560 - 41633512
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattga 53  Q
    |||||| |||||||||||||||| ||||| |||||||||| ||||||||    
T  41633560 aatttattcttatctatttattacatgtgttatttgtattgaaaattga 41633512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 360100 - 360041
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaat 60  Q
    |||||| |||||||||||||||| | ||||| |||||||||||| ||| |||| ||||||    
T  360100 tttgaacttactcttatctatttctcatatgagctatttgtatttaaagttgatggtaat 360041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 236
Target Start/End: Complemental strand, 9774440 - 9774376
Alignment:
Q  170 gcggtttaggcaagtgtatcaaatcgttaccaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||| |||||||| |||||| || |||||||||| |||||||||||  |||||||||| ||||||||    
T  9774440 gcggattaggcaaatgtatcgaaccgttaccaaggaataaagtgat--gtagagtatcgtatccaca 9774376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 28770524 - 28770481
Alignment:
Q  196 ttaccaagtaataaagtgataagtagagtatcatatccacaggt 239  Q
    ||||||| |||||||||||||||||||||||| |||||| ||||    
T  28770524 ttaccaaataataaagtgataagtagagtatcgtatccataggt 28770481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 128
Target Start/End: Original strand, 41384775 - 41384898
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgggtta 104  Q
    |||||| |||||||||||| |||  |||| |||||||||| ||||||||  ||| | ||||||| |||||||| | |  ||||| | |  |||   ||||    
T  41384775 aatttattcttatctatttgttacgtgtgttatttgtattgaaaattgagagtattgttggaaaaagaaaaagctaggtcaaaagagctgaaaaatgtta 41384874  T
Q  105 ttttctttatatatagtatagata 128  Q
    |||||||| |||||||||||||||    
T  41384875 ttttctttgtatatagtatagata 41384898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 44857107 - 44857064
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtatt 44  Q
    |||||||||||| |||||||||||||||| ||| ||||||||||    
T  44857107 tttgaatttactattatctatttattataagtgttatttgtatt 44857064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 22278181 - 22278219
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctattt 39  Q
    |||||||||||| |||||||||| |||||||||||||||    
T  22278181 tttgaatttacttttatctattttttatatgtgctattt 22278219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 238
Target Start/End: Original strand, 30411696 - 30411738
Alignment:
Q  196 ttaccaagtaataaagtgataagtagagtatcatatccacagg 238  Q
    |||||| ||||||||||||||||||||||||| |||| |||||    
T  30411696 ttaccatgtaataaagtgataagtagagtatcgtatcaacagg 30411738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 33134218 - 33134264
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaatt 51  Q
    |||||| |||||||||||| ||||||||| |||||||||| ||||||    
T  33134218 aatttattcttatctattttttatatgtgttatttgtattgaaaatt 33134264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 33312831 - 33312785
Alignment:
Q  12 tcttatctatttattatatgtgctatttgtattaaaaattgaaggta 58  Q
    |||||||||||| ||| ||||| ||||||||||||||||||| ||||    
T  33312831 tcttatctatttgttacatgtgttatttgtattaaaaattgagggta 33312785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 127
Target Start/End: Complemental strand, 42185142 - 42185020
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgggtta 104  Q
    |||||| |||||||| ||| ||| ||||| |||||||||| |||||| | || | | |||||||||||||||||  |  |||||||    |||  | |||    
T  42185142 aatttattcttatctttttgttacatgtgttatttgtattgaaaattaagggcatttttggaaagagaaaaagtcagtccaaaaaaggggaaagagatta 42185043  T
Q  105 ttttctttatatatagtatagat 127  Q
    ||||||||||||||| |||||||    
T  42185042 ttttctttatatatattatagat 42185020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 220
Target Start/End: Original strand, 45553126 - 45553172
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagta 220  Q
    ||||||||||||| ||||||||| | |||||||||||||||||||||    
T  45553126 ttaggcaagtgtaccaaatcgtttatcaagtaataaagtgataagta 45553172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 3357914 - 3357979
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaaga 70  Q
    |||||| |||||||||||| ||| ||||| |||||||||| |||||| | |||| | |||||||||    
T  3357914 aatttattcttatctatttgttacatgtgttatttgtattgaaaattaagggtatttttggaaaga 3357979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 9243859 - 9243936
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagt 78  Q
    |||||||||| | |||||||||| ||||||||  |||||||||| ||| |||| |  ||| ||| |||||||||||||    
T  9243859 tttgaatttatttttatctatttgttatatgtattatttgtattgaaagttgatgacaattttgaaaagagaaaaagt 9243936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 128
Target Start/End: Complemental strand, 15508331 - 15508298
Alignment:
Q  95 aaacgggttattttctttatatatagtatagata 128  Q
    |||||||||| |||||||||||||||||||||||    
T  15508331 aaacgggttactttctttatatatagtatagata 15508298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 236
Target Start/End: Original strand, 17349343 - 17349414
Alignment:
Q  164 tgatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||||||| | |||||||| ||||  |||||||| |||||||||||||||| ||||||||||||| ||||||||    
T  17349343 tgatgtgcagattaggcaa-tgtactaaatcgtttaccaagtaataaagtg-taagtagagtatcgtatccaca 17349414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 9192333 - 9192381
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattga 53  Q
    |||||| |||||||||||| ||| ||||| |||||||||| ||||||||    
T  9192333 aatttattcttatctatttgttacatgtgttatttgtattgaaaattga 9192381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 9245344 - 9245392
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattga 53  Q
    |||||| |||||||||||| ||| ||||  |||||||||||||||||||    
T  9245344 aatttattcttatctatttgttacatgtattatttgtattaaaaattga 9245392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 226
Target Start/End: Complemental strand, 12953397 - 12953345
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtat 226  Q
    ||||||||||||| |||||| || | ||||||||||||| |||||||||||||    
T  12953397 ttaggcaagtgtaccaaatcatttatcaagtaataaagtaataagtagagtat 12953345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 237
Target Start/End: Complemental strand, 17675730 - 17675670
Alignment:
Q  178 ggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacag 237  Q
    ||||| |||| ||||||||| |||||||||||||| || |||||||| |||||||| ||||    
T  17675730 ggcaaatgtagcaaatcgtttaccaagtaataaagagaaaagtagagaatcatatcaacag 17675670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 78
Target Start/End: Complemental strand, 19133173 - 19133121
Alignment:
Q  26 tatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagt 78  Q
    |||||||| |||||||||| ||| |||| |||||| ||| |||||||||||||    
T  19133173 tatatgtgttatttgtattgaaagttgatggtaattttgaaaagagaaaaagt 19133121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 24100555 - 24100507
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattga 53  Q
    |||||| |||||||||||| ||| ||||| |||||||||| ||||||||    
T  24100555 aatttattcttatctatttgttacatgtgttatttgtattgaaaattga 24100507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 35126142 - 35126190
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattga 53  Q
    |||||| |||||||||||| ||||||||  |||||||||| ||||||||    
T  35126142 aatttattcttatctatttgttatatgtattatttgtattgaaaattga 35126190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 76
Target Start/End: Original strand, 39271835 - 39271899
Alignment:
Q  12 tcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaa 76  Q
    |||||| ||||| ||| ||||| |||||||||| ||||||||  ||| | |||||||||||||||    
T  39271835 tcttatatatttgttacatgtgttatttgtattgaaaattgagagtatttttggaaagagaaaaa 39271899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 232
Target Start/End: Complemental strand, 45621962 - 45621926
Alignment:
Q  196 ttaccaagtaataaagtgataagtagagtatcatatc 232  Q
    ||||||||||||||||||| |||||||||||| ||||    
T  45621962 ttaccaagtaataaagtgagaagtagagtatcgtatc 45621926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 4e-25; HSPs: 58)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 165 - 238
Target Start/End: Complemental strand, 25550617 - 25550543
Alignment:
Q  165 gatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagg 238  Q
    ||||||| | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  25550617 gatgtgcagattaggcaagtgtatcaaatcgtttaccaagtaataaagtgataagtagagtatcatatccacagg 25550543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 9616431 - 9616558
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgg 100  Q
    |||||||||||| ||||||||| |||||||||| |||||||||| ||| |||| |||||| | ||||||||||||| |  |||||||| | ||||||  |    
T  9616431 tttgaatttacttttatctattgattatatgtgttatttgtatttaaagttgatggtaatttaggaaagagaaaaaatcagcacaaaagaaccaaaagtg 9616530  T
Q  101 gttattttctttatatatagtatagata 128  Q
     |||||||||||||| ||| ||||||||    
T  9616531 attattttctttatacataatatagata 9616558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 27175038 - 27174967
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaa 76  Q
    |||||||| |||||||||| |||||||||||||||||||| ||||||||||||||| ||| |||||||||||    
T  27175038 aatttacttttatctatttgttatatgtgctatttgtattgaaaattgaaggtaattttgaaaagagaaaaa 27174967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 130
Target Start/End: Original strand, 17916253 - 17916378
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgggtta 104  Q
    |||||| |||||||||||| ||| ||||| |||||||||| ||||||  ||||| | | ||||||| |||||||  |||||||||| |  |||   ||||    
T  17916253 aatttattcttatctatttgttacatgtgttatttgtattgaaaattataggtattttcggaaagaaaaaaagtcagcacaaaaaagctgaaaatagtta 17916352  T
Q  105 ttttctttatatatagtatagatata 130  Q
    ||||||||||||||| ||||||||||    
T  17916353 ttttctttatatataatatagatata 17916378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 236
Target Start/End: Complemental strand, 19086276 - 19086220
Alignment:
Q  181 aagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  19086276 aagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtattatatccaca 19086220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 35583398 - 35583473
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaa 76  Q
    |||||||||| |||||||| ||| ||||||||| |||||||||| |||||| | |||||| || ||||||||||||    
T  35583398 tttgaatttaatcttatctttttgttatatgtgttatttgtattgaaaattaatggtaattttagaaagagaaaaa 35583473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 15469932 - 15469994
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    ||||||||||||| ||||||||| ||||||||||||||||||| || ||||||| ||||||||    
T  15469932 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataggtcgagtatcgtatccaca 15469994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 175 - 236
Target Start/End: Complemental strand, 24267057 - 24266996
Alignment:
Q  175 ttaggcaagtgtatcaaatcg-ttaccaagtaataaagtgataagtagagtatcatatccaca 236  Q
    ||||||||||||| ||||||| |||||||||||||||||| ||||||||||||| ||||||||    
T  24267057 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtg-taagtagagtatcgtatccaca 24266996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 175 - 236
Target Start/End: Complemental strand, 24343688 - 24343627
Alignment:
Q  175 ttaggcaagtgtatcaaatcg-ttaccaagtaataaagtgataagtagagtatcatatccaca 236  Q
    ||||||||||||| ||||||| |||||||||||||||||| ||||||||||||| ||||||||    
T  24343688 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtg-taagtagagtatcgtatccaca 24343627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 7464297 - 7464362
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaaga 70  Q
    |||||| |||||||||||| ||| ||||| |||||||||| ||||||||||||| | |||||||||    
T  7464297 aatttattcttatctatttgttacatgtgttatttgtattgaaaattgaaggtatttttggaaaga 7464362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 178 - 238
Target Start/End: Complemental strand, 15375982 - 15375921
Alignment:
Q  178 ggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagg 238  Q
    |||||||||| ||||||||| ||||| ||||||| |||||||||||||||| ||||||||||    
T  15375982 ggcaagtgtaccaaatcgtttaccaaataataaaatgataagtagagtatcctatccacagg 15375921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 23014712 - 23014660
Alignment:
Q  174 tttaggcaagtgtatcaaatcgttaccaagtaataaagtgataagtagagtat 226  Q
    ||||||||||||||||||||  ||| ||| |||||||||||||||||||||||    
T  23014712 tttaggcaagtgtatcaaatgattatcaaataataaagtgataagtagagtat 23014660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 178 - 236
Target Start/End: Complemental strand, 19004326 - 19004267
Alignment:
Q  178 ggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    ||||||||||  |||||||| |||||||||||||||||||||| ||||||| ||||||||    
T  19004326 ggcaagtgtactaaatcgtttaccaagtaataaagtgataagtggagtatcgtatccaca 19004267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 236
Target Start/End: Complemental strand, 18208351 - 18208290
Alignment:
Q  175 ttaggcaagtgtatcaaatcg-ttaccaagtaataaagtgataagtagagtatcatatccaca 236  Q
    ||||||||||||| ||||||| |||| ||||||||||||| ||||||||||||| ||||||||    
T  18208351 ttaggcaagtgtaccaaatcgtttacaaagtaataaagtg-taagtagagtatcgtatccaca 18208290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 198 - 236
Target Start/End: Complemental strand, 23388917 - 23388879
Alignment:
Q  198 accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  23388917 accaagtaataaagtgataagtagagtatcgtatccaca 23388879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 16312856 - 16312779
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagt 78  Q
    |||||||||||| |||||||||| |||||| || |||||||||||||| | || | |||| || |||| |||||||||    
T  16312856 tttgaatttacttttatctatttgttatatatgttatttgtattaaaagtggaggataattttagaaaaagaaaaagt 16312779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 124
Target Start/End: Complemental strand, 18524713 - 18524624
Alignment:
Q  35 tatttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgggttattttctttatatatagtata 124  Q
    |||||||||| |||||||| | || | ||| |||||||||||||  |||||||| | |  |||  |||||||||||||||||||||||||    
T  18524713 tatttgtattgaaaattgatgatatttttgaaaagagaaaaagtcagcacaaaatagctgaaagaggttattttctttatatatagtata 18524624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 24167687 - 24167630
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatat 231  Q
    ||||| |||||||| |||||||| |||||||||||||||  |||||||||||||||||    
T  24167687 ttaggtaagtgtattaaatcgtttaccaagtaataaagtagtaagtagagtatcatat 24167630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 24245642 - 24245585
Alignment:
Q  180 caagtgtatcaaatcg-ttaccaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||||||  ||||||| |||||| ||||||||||||||||||||||||| ||||||||    
T  24245642 caagtgtcacaaatcgcttaccatgtaataaagtgataagtagagtatcgtatccaca 24245585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 238
Target Start/End: Original strand, 34128636 - 34128696
Alignment:
Q  178 ggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagg 238  Q
    |||||||||| ||| ||||| ||||||||||||||||||||||||| |||| ||||||||||    
T  34128636 ggcaagtgtaccaa-tcgttgaccaagtaataaagtgataagtagaatatcgtatccacagg 34128696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 38099016 - 38099093
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagt 78  Q
    ||||||||||||||||||||||||| |||||||  ||||| ||| ||| |||| ||||||  || || ||||||||||    
T  38099016 tttgaatttactcttatctatttatcatatgtgtgatttgcattgaaagttgagggtaattctgaaaggagaaaaagt 38099093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 43370009 - 43369956
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggta 58  Q
    |||||| |||||||||||||||| ||||| |||||||||| |||||||| ||||    
T  43370009 aatttattcttatctatttattacatgtgttatttgtattgaaaattgagggta 43369956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 8839707 - 8839659
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattga 53  Q
    ||||||||||||||||||| ||| ||||| |||||||||| ||||||||    
T  8839707 aatttactcttatctatttgttacatgtgttatttgtattgaaaattga 8839659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 130
Target Start/End: Complemental strand, 13999099 - 13998972
Alignment:
Q  5 aatttactcttatctatttattatatgtgctat--ttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgggt 102  Q
    |||||| |||||||||||| ||| ||||| |||  ||||||| |||||||| || | | |||||||||||||||||  |  ||||| |    |||  |||    
T  13999099 aatttattcttatctatttgttacatgtgttatatttgtattgaaaattgagggcacttttggaaagagaaaaagtcagtccaaaagagttgaaagaggt 13999000  T
Q  103 tattttctttatatatagtatagatata 130  Q
    |||||||| |||||||||||||||||||    
T  13998999 tattttctctatatatagtatagatata 13998972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 233
Target Start/End: Original strand, 19051532 - 19051604
Alignment:
Q  162 actgatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatcc 233  Q
    |||||||||||| ||||  ||||||| ||||||||| || ||||||||||||||||||| |||| || |||||    
T  19051532 actgatgtgcggattagaaaagtgtaccaaatcgtttacaaagtaataaagtgataagttgagtgtcgtatcc 19051604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 236
Target Start/End: Complemental strand, 20315511 - 20315471
Alignment:
Q  196 ttaccaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||||||||||||| ||||||||||||||||| ||||||||    
T  20315511 ttaccaagtaataatgtgataagtagagtatcgtatccaca 20315471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 22702148 - 22702079
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaa 76  Q
    |||||| |||||||||||||||| ||||  |||||||||| |||||||| | || | |||||||||||||||    
T  22702148 aatttattcttatctatttattacatgt--tatttgtattgaaaattgaggctatttttggaaagagaaaaa 22702079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 235
Target Start/End: Original strand, 24140460 - 24140499
Alignment:
Q  196 ttaccaagtaataaagtgataagtagagtatcatatccac 235  Q
    |||||||||||||||||||||||||||||||  |||||||    
T  24140460 ttaccaagtaataaagtgataagtagagtattgtatccac 24140499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 31796439 - 31796486
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattg 52  Q
    |||||| |||||||||||| ||| ||||| ||||||||||||||||||    
T  31796439 aatttattcttatctatttgttacatgtgttatttgtattaaaaattg 31796486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 35627441 - 35627492
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaagg 56  Q
    |||||| |||||||||||| ||| ||||| |||||||||| |||||||||||    
T  35627441 aatttattcttatctatttgttacatgtgttatttgtattgaaaattgaagg 35627492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 36226375 - 36226304
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaa 76  Q
    |||||| |||||||||||| ||| || || |||||||||| |||||||| | || | |||||||||||||||    
T  36226375 aatttattcttatctatttgttacatttgttatttgtattgaaaattgaggatatttttggaaagagaaaaa 36226304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 42521922 - 42521879
Alignment:
Q  10 actcttatctatttattatatgtgctatttgtattaaaaattga 53  Q
    |||||||||||||||||| ||||| |||||||||| ||||||||    
T  42521922 actcttatctatttattacatgtgttatttgtattcaaaattga 42521879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 236
Target Start/End: Complemental strand, 17171656 - 17171594
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    ||||| ||||||| |||||| || | |||||||||||||||||||||||| ||| ||||||||    
T  17171656 ttaggtaagtgtaccaaatcttttatcaagtaataaagtgataagtagagcatcgtatccaca 17171594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 238
Target Start/End: Original strand, 17185481 - 17185523
Alignment:
Q  196 ttaccaagtaataaagtgataagtagagtatcatatccacagg 238  Q
    ||||||| |||||||||||||||||||||||| |||| |||||    
T  17185481 ttaccaaataataaagtgataagtagagtatcgtatctacagg 17185523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 237
Target Start/End: Original strand, 17431884 - 17431942
Alignment:
Q  180 caagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacag 237  Q
    ||||||||  |||||||| ||||||||||||||||  |||||||||||| |||||||||    
T  17431884 caagtgtactaaatcgtttaccaagtaataaagtggaaagtagagtatcgtatccacag 17431942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 19289006 - 19289056
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaag 55  Q
    |||||| |||||||||||| |||||| || |||||||||| ||||||||||    
T  19289006 aatttattcttatctatttgttatatatgttatttgtattgaaaattgaag 19289056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 236
Target Start/End: Complemental strand, 24852275 - 24852213
Alignment:
Q  175 ttaggcaagtgtatcaaatcg-ttaccaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||||||||| ||  |||||| ||||||||||||||| ||||||||| |||||| ||||||||    
T  24852275 ttaggcaagtctactaaatcgattaccaagtaataaaatgataagtatagtatcgtatccaca 24852213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 130
Target Start/End: Complemental strand, 36226246 - 36226216
Alignment:
Q  100 ggttattttctttatatatagtatagatata 130  Q
    |||||||||||||||||||||||||||||||    
T  36226246 ggttattttctttatatatagtatagatata 36226216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 38697180 - 38697226
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaatt 51  Q
    |||||| |||||||||||| ||| ||||| |||||||||||||||||    
T  38697180 aatttattcttatctatttgttacatgtgttatttgtattaaaaatt 38697226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 1384549 - 1384496
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggta 58  Q
    |||||| |||||| ||||||||||||||  |||||||||| |||||||| ||||    
T  1384549 aatttattcttatttatttattatatgttttatttgtattgaaaattgagggta 1384496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 15341507 - 15341450
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggta 58  Q
    ||||||||||||||||| ||||| ||||| | |  ||||||||| |||||||||||||    
T  15341507 tttgaatttactcttatttatttgttatacgagtcatttgtattgaaaattgaaggta 15341450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 175 - 235
Target Start/End: Original strand, 15690774 - 15690834
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccac 235  Q
    ||||| |||| || ||||||||| ||||| |||||||||||||||||||||||| |||||||    
T  15690774 ttaggtaagtttaccaaatcgtttaccaa-taataaagtgataagtagagtatcgtatccac 15690834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 17065121 - 17065174
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggta 58  Q
    |||||| ||||||||||||||||  |||| |||||||||| |||||||| ||||    
T  17065121 aatttattcttatctatttattacgtgtgttatttgtattgaaaattgagggta 17065174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 24007376 - 24007323
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggta 58  Q
    |||||| |||||||||||| ||| ||||| |||||||||| |||||||| ||||    
T  24007376 aatttattcttatctatttgttacatgtgttatttgtattcaaaattgagggta 24007323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 25524513 - 25524440
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagt 78  Q
    |||||| |||||||||||||||| || || | |||||||| |||||||| |||| | ||| |||| ||||||||    
T  25524513 aatttattcttatctatttattacatttgttgtttgtattgaaaattgagggtatttttgaaaagtgaaaaagt 25524440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 127
Target Start/End: Complemental strand, 30841541 - 30841429
Alignment:
Q  14 ttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgggttattttcttta 113  Q
    |||||||||||||| || || |||||||||| |||||||| || | | || ||||||||||||    ||  |||| | |  ||| |||||||||||||||    
T  30841541 ttatctatttatta-atatgttatttgtattgaaaattgagggcattttttgaaagagaaaaaaccagccgaaaataacttaaatgggttattttcttta 30841443  T
Q  114 tatatagtatagat 127  Q
    ||||||||||||||    
T  30841442 tatatagtatagat 30841429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 8990202 - 8990150
Alignment:
Q  6 atttactcttatctatttattatatgtgctatttgtattaaaaattgaaggta 58  Q
    ||||| |||||||||||| ||| ||||| |||||||||| |||||| ||||||    
T  8990202 atttattcttatctatttgttacatgtgttatttgtattgaaaattaaaggta 8990150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 217
Target Start/End: Complemental strand, 15492991 - 15492955
Alignment:
Q  181 aagtgtatcaaatcgttaccaagtaataaagtgataa 217  Q
    ||||||| |||||||||||||||| ||||||||||||    
T  15492991 aagtgtaccaaatcgttaccaagtgataaagtgataa 15492955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 236
Target Start/End: Complemental strand, 17315177 - 17315141
Alignment:
Q  200 caagtaataaagtgataagtagagtatcatatccaca 236  Q
    ||||||||||||||||||||| |||||| ||||||||    
T  17315177 caagtaataaagtgataagtaaagtatcgtatccaca 17315141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 236
Target Start/End: Complemental strand, 19283936 - 19283896
Alignment:
Q  196 ttaccaagtaataaagtgataagtagagtatcatatccaca 236  Q
    ||||||| |||||||||||||||||||||||  ||||||||    
T  19283936 ttaccaaataataaagtgataagtagagtattgtatccaca 19283896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 22755517 - 22755577
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatcca 234  Q
    |||| |||||||| | ||||||| |||||||||| ||| ||||||||||||||| ||||||    
T  22755517 ttagacaagtgtaccgaatcgtttaccaagtaatgaagagataagtagagtatcgtatcca 22755577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 24250816 - 24250744
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaag 77  Q
    |||||| |||||| ||||| ||| ||| | |||||||||| ||||||||||| | | || |||||||||||||    
T  24250816 aatttattcttatatatttgttacatgagttatttgtattcaaaattgaaggcatttttagaaagagaaaaag 24250744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 238
Target Start/End: Complemental strand, 25402440 - 25402376
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtta-ccaagtaataaagtgataagtagagtatcatatccacagg 238  Q
    ||||||||||||| ||||| |||  ||||||||  ||||||||||||||||||  ||||||||||    
T  25402440 ttaggcaagtgtaccaaattgtttgccaagtaaggaagtgataagtagagtattgtatccacagg 25402376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 238
Target Start/End: Complemental strand, 26110564 - 26110501
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagg 238  Q
    ||||||||||||| | ||||||| | ||||||||||| || |||||||||||| |||||||||||    
T  26110564 ttaggcaagtgtaccgaatcgtttatcaagtaataaaatg-taagtagagtataatatccacagg 26110501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 238
Target Start/End: Complemental strand, 26121426 - 26121363
Alignment:
Q  175 ttaggcaagtgtatcaaatcg-ttaccaagtaataaagtgataagtagagtatcatatccacagg 238  Q
    ||||||||||||| ||||||| ||| ||||||||||| || ||||||||||||  ||||||||||    
T  26121426 ttaggcaagtgtaccaaatcgtttagcaagtaataaaatg-taagtagagtatagtatccacagg 26121363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 236
Target Start/End: Original strand, 34487656 - 34487695
Alignment:
Q  196 ttaccaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||||||||||||||||| |||||||| |||||||||||||    
T  34487656 ttaccaagtaataaagtg-taagtagaatatcatatccaca 34487695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 36954222 - 36954270
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattga 53  Q
    |||||| |||||||||||| ||| ||||| |||||||||| ||||||||    
T  36954222 aatttattcttatctatttgttacatgtgttatttgtattgaaaattga 36954270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 42718642 - 42718594
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattga 53  Q
    |||||| |||||||||||| ||| ||||| |||||||||| ||||||||    
T  42718642 aatttattcttatctatttgttacatgtgttatttgtattgaaaattga 42718594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 7e-24; HSPs: 74)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 15596813 - 15596685
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgg 100  Q
    ||||||||||||||||||||||| ||||||||  |||||||||| ||| ||||||||||| |  ||||||||||||||   | ||||||  | |||| |     
T  15596813 tttgaatttactcttatctatttgttatatgtattatttgtatttaaagttgaaggtaatttaagaaagagaaaaagtcaacccaaaaatactaaaatga 15596714  T
Q  101 gttattttctttatatatagtatagatat 129  Q
    |||||||||||||||||||||||| ||||    
T  15596713 gttattttctttatatatagtataaatat 15596685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 162 - 234
Target Start/End: Original strand, 17359145 - 17359218
Alignment:
Q  162 actgatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatcca 234  Q
    |||||||||||| ||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||    
T  17359145 actgatgtgcggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagttgagtatcatatcca 17359218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 898783 - 898712
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaa 76  Q
    ||||||||||||||||||| |||||||||||||||||||| ||  ||||||||||| |||||||||||||||    
T  898783 aatttactcttatctatttgttatatgtgctatttgtattgaatgttgaaggtaattttggaaagagaaaaa 898712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 21449073 - 21449147
Alignment:
Q  163 ctgatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    ||||||||||| | ||||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  21449073 ctgatgtgcggatcaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccaca 21449147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 23773567 - 23773700
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtg----ctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaa 96  Q
    ||||||||||||||||||||||| ||||||||     ||||||||||| ||| |||| | |||| ||||||||||||||||   || ||||| |  | ||    
T  23773567 tttgaatttactcttatctatttgttatatgtttgttctatttgtattgaaatttgaggataattttggaaagagaaaaagacagctcaaaagaatcgaa 23773666  T
Q  97 acgggttattttctttatatatagtatagatata 130  Q
    ||  ||||||||||||||||||||||||||||||    
T  23773667 acatgttattttctttatatatagtatagatata 23773700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 128
Target Start/End: Original strand, 16823797 - 16823920
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgggtta 104  Q
    |||||| |||||||||||| ||| ||||  |||||||||| |||||||| |||| | ||| |||||||||| || ||| |||||||  |  ||  |||||    
T  16823797 aatttattcttatctatttgttacatgtattatttgtattgaaaattgatggtatttttgaaaagagaaaatgtcggcccaaaaaaaactgaagaggtta 16823896  T
Q  105 ttttctttatatatagtatagata 128  Q
    ||||||||||||||||||||||||    
T  16823897 ttttctttatatatagtatagata 16823920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 164 - 236
Target Start/End: Complemental strand, 13345450 - 13345377
Alignment:
Q  164 tgatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    ||||||| || || |||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  13345450 tgatgtgtggattgggcaagtgtaccaaattgtttaccaagtaataaagtgataagtagagtatcatatccaca 13345377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 777347 - 777465
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgg 100  Q
    |||||||||||| ||||||||  |||||||||  |||||||||| |||||||| ||||||||| ||| ||||||||||  || ||||  | |||||| ||    
T  777347 tttgaatttacttttatctatacattatatgtattatttgtattcaaaattgagggtaatcttagaaggagaaaaagtcagcccaaatgagccaaaaggg 777446  T
Q  101 gttattttctttatatata 119  Q
       ||||||||||||||||    
T  777447 aaaattttctttatatata 777465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 178 - 235
Target Start/End: Complemental strand, 15544066 - 15544008
Alignment:
Q  178 ggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccac 235  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||    
T  15544066 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccac 15544008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 17837513 - 17837575
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    ||||||||||||| ||||| ||| ||||||||||||||| |||||||||||||||||||||||    
T  17837513 ttaggcaagtgtaccaaattgtttaccaagtaataaagttataagtagagtatcatatccaca 17837575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 127
Target Start/End: Complemental strand, 21343783 - 21343661
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgggtta 104  Q
    |||||| |||||||||||| ||||||| | ||| ||||||||||||||| |||| | ||| |||| ||||| ||  || ||||||  |  ||| ||||||    
T  21343783 aatttattcttatctatttgttatatgcgttatatgtattaaaaattgagggtatttttgaaaagggaaaaggtcagcccaaaaatgcttaaaagggtta 21343684  T
Q  105 ttttctttatatatagtatagat 127  Q
    ||||||||||| |||||||||||    
T  21343683 ttttctttatagatagtatagat 21343661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 127
Target Start/End: Complemental strand, 21348648 - 21348526
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgggtta 104  Q
    |||||| |||||||||||| ||||||| | ||| ||||||||||||||| |||| | ||| |||| ||||| ||  || ||||||  |  ||| ||||||    
T  21348648 aatttattcttatctatttgttatatgcgttatatgtattaaaaattgagggtatttttgaaaagggaaaaggtcagcccaaaaatgcttaaaagggtta 21348549  T
Q  105 ttttctttatatatagtatagat 127  Q
    ||||||||||| |||||||||||    
T  21348548 ttttctttatagatagtatagat 21348526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 24281273 - 24281335
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||||||| |||| ||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  24281273 ttaggcaaatgtaccaaatcgtttaccaagtaataaagtgataagtagattatcatatccaca 24281335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 175 - 235
Target Start/End: Original strand, 22664202 - 22664263
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccac 235  Q
    |||||||| |||| ||||||||| |||||||||||||||||||||||||||||| |||||||    
T  22664202 ttaggcaaatgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcttatccac 22664263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 178 - 238
Target Start/End: Complemental strand, 24306405 - 24306344
Alignment:
Q  178 ggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagg 238  Q
    |||||||||| ||| ||||| |||||||||||||||||||||||||||||| ||||||||||    
T  24306405 ggcaagtgtaccaagtcgtttaccaagtaataaagtgataagtagagtatcgtatccacagg 24306344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 42676579 - 42676451
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgg 100  Q
    ||||||||||| ||||||||||| ||||||||  |||||||||||||| |||| |||||| || ||||||  |||| |  || ||||| |   |||||      
T  42676579 tttgaatttacccttatctatttgttatatgtagtatttgtattaaaagttgagggtaatttttgaaagatgaaaaatcagcccaaaatagataaaacat 42676480  T
Q  101 gttattttctttatatatagtatagatat 129  Q
    |||||||||||||||| |||||| |||||    
T  42676479 gttattttctttatatgtagtattgatat 42676451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 9978333 - 9978262
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaa 76  Q
    ||||||||||||| ||||| ||||| ||| |||||||||||||| |||| |||||| |||||||||| ||||    
T  9978333 aatttactcttatttatttgttatacgtgttatttgtattaaaagttgacggtaattttggaaagaggaaaa 9978262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 178 - 236
Target Start/End: Original strand, 12208600 - 12208659
Alignment:
Q  178 ggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    ||||||||||  |||||||| ||||||||||||||||||||||||| |||||||||||||    
T  12208600 ggcaagtgtactaaatcgtttaccaagtaataaagtgataagtagaatatcatatccaca 12208659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 78
Target Start/End: Complemental strand, 12266803 - 12266732
Alignment:
Q  7 tttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagt 78  Q
    ||||||||||||||||| ||||||||| |||||||||||||| |||| ||||   ||| |||||||||||||    
T  12266803 tttactcttatctatttgttatatgtgttatttgtattaaaagttgagggtagatttgaaaagagaaaaagt 12266732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 13309281 - 13309222
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaat 60  Q
    ||||||||| ||||||||||||||||||||||| |||||||||| ||| |||| ||||||    
T  13309281 tttgaattttctcttatctatttattatatgtgttatttgtattgaaagttgagggtaat 13309222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 174 - 236
Target Start/End: Original strand, 26540891 - 26540953
Alignment:
Q  174 tttaggcaagtgtatcaaatcg-ttaccaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||||||||||||| ||||||| |||||||||||||||||| ||||||||||||| ||||||||    
T  26540891 tttaggcaagtgtaccaaatcgtttaccaagtaataaagtg-taagtagagtatcgtatccaca 26540953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 147627 - 147689
Alignment:
Q  175 ttaggcaagtgtatcaaatcgttac-caagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||| |||||||||||||||||| | |||||||||||||||||||| ||||||||||| ||||    
T  147627 ttagacaagtgtatcaaatcgtttcacaagtaataaagtgataagtggagtatcatattcaca 147689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 6045045 - 6045123
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagtt 79  Q
    |||||||||||| || ||||||| |||| |||||||||||||| |||| |||| | |||| ||| ||||||||||||||    
T  6045045 tttgaatttactattgtctatttgttatgtgtgctatttgtataaaaagttgatgataattttgaaaagagaaaaagtt 6045123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 175 - 236
Target Start/End: Complemental strand, 12012903 - 12012841
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    ||||||||||||||||||||||| | |||||| ||||||||||||||||||||  ||||||||    
T  12012903 ttaggcaagtgtatcaaatcgtttatcaagtattaaagtgataagtagagtattgtatccaca 12012841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 175 - 236
Target Start/End: Complemental strand, 23038114 - 23038053
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||| ||||||| ||||||||    
T  23038114 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagt-gagtatcgtatccaca 23038053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 178 - 238
Target Start/End: Original strand, 14779564 - 14779625
Alignment:
Q  178 ggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagg 238  Q
    |||||||||| |||||| || |||||||||||| ||||||| ||||||||||||||||||||    
T  14779564 ggcaagtgtaccaaatcatttaccaagtaataatgtgataattagagtatcatatccacagg 14779625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 17610354 - 17610297
Alignment:
Q  180 caagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||||||| ||||||||| ||||||||||||||| |||||||||||||| ||||||||    
T  17610354 caagtgtaccaaatcgtttaccaagtaataaagttataagtagagtatcgtatccaca 17610297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 178 - 238
Target Start/End: Complemental strand, 18736340 - 18736279
Alignment:
Q  178 ggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagg 238  Q
    |||||||||| ||||||||| | |||||||||||||||||||||| ||||| ||||||||||    
T  18736340 ggcaagtgtaccaaatcgtttaacaagtaataaagtgataagtagtgtatcgtatccacagg 18736279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 175 - 227
Target Start/End: Complemental strand, 32383101 - 32383048
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatc 227  Q
    ||||||||||||| ||||||||| |||||||||||||||||||| |||||||||    
T  32383101 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataaatagagtatc 32383048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 9787982 - 9787922
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatcca 234  Q
    ||||||||||||| |||||| || | |||||||||||||||||||||||||||| ||||||    
T  9787982 ttaggcaagtgtaccaaatcatttagcaagtaataaagtgataagtagagtatcgtatcca 9787922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 175 - 226
Target Start/End: Complemental strand, 27117821 - 27117769
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtat 226  Q
    |||||||||| || ||||||||| |||||||||||||||||||||||||||||    
T  27117821 ttaggcaagtttaccaaatcgtttaccaagtaataaagtgataagtagagtat 27117769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 18115785 - 18115750
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgcta 36  Q
    ||||||||||||||||||||||||||||||||||||    
T  18115785 tttgaatttactcttatctatttattatatgtgcta 18115750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 76
Target Start/End: Original strand, 18227158 - 18227229
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaa 76  Q
    |||||||| |||| ||||||||||||||| |||| ||||| |||| ||| | |||| |||||||||||||||    
T  18227158 aatttacttttatatatttattatatgtgttattagtattgaaaactgaggctaattttggaaagagaaaaa 18227229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 178 - 236
Target Start/End: Complemental strand, 25405730 - 25405671
Alignment:
Q  178 ggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||||||||| ||| ||||| ||||||||||||||||||||||| |||||| ||||||||    
T  25405730 ggcaagtgtaccaagtcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 25405671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 43019805 - 43019734
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaa 76  Q
    ||||||||||||||||||||||||||||| |||| ||||| ||| |||| | |||| ||| || ||||||||    
T  43019805 aatttactcttatctatttattatatgtgatattcgtattgaaagttgaggataattttgaaaggagaaaaa 43019734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 236
Target Start/End: Complemental strand, 3591756 - 3591694
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||||||||||||  |||||||| | |||||||||||||||||| ||||||||| ||||||||    
T  3591756 ttaggcaagtgtacaaaatcgtttatcaagtaataaagtgataaatagagtatcgtatccaca 3591694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 236
Target Start/End: Complemental strand, 16787829 - 16787767
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    ||||||||| | ||||||||||| | |||||||||||||||||||||||||||| ||| ||||    
T  16787829 ttaggcaagggaatcaaatcgtttatcaagtaataaagtgataagtagagtatcgtattcaca 16787767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 198 - 236
Target Start/End: Complemental strand, 21666687 - 21666649
Alignment:
Q  198 accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  21666687 accaagtaataaagtgataagtagagtatcgtatccaca 21666649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 13281223 - 13281300
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagt 78  Q
    ||||||||||||||||| ||||| |||||| || |||||||||| |||  | |||||||| ||| ||||| |||||||    
T  13281223 tttgaatttactcttatttatttgttatatatgatatttgtattcaaagataaaggtaattttgaaaagataaaaagt 13281300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 14258933 - 14258982
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaa 54  Q
    |||||| |||||||||||| ||| ||||| ||||||||||||||||||||    
T  14258933 aatttattcttatctatttgttacatgtgttatttgtattaaaaattgaa 14258982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 234
Target Start/End: Original strand, 29242518 - 29242575
Alignment:
Q  178 ggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatcca 234  Q
    |||||||||| ||||| ||| | |||||||||||||||||||||||||||| ||||||    
T  29242518 ggcaagtgtaccaaattgtttatcaagtaataaagtgataagtagagtatcgtatcca 29242575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 128
Target Start/End: Original strand, 47401591 - 47401628
Alignment:
Q  91 tccaaaacgggttattttctttatatatagtatagata 128  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  47401591 tccaaaaggggttattttctttatatatagtatagata 47401628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 17121582 - 17121523
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatcca 234  Q
    |||| |||||||||||||| ||| | |||||||||||||| ||||||||||||||||||||    
T  17121582 ttagacaagtgtatcaaattgtttatcaagtaataaagtg-taagtagagtatcatatcca 17121523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 233
Target Start/End: Complemental strand, 21988082 - 21988026
Alignment:
Q  178 ggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatcc 233  Q
    |||||||||| |||||| || ||||| |||||||||||||||||||||||| |||||    
T  21988082 ggcaagtgtaccaaatcctttaccaaataataaagtgataagtagagtatcgtatcc 21988026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 22620258 - 22620318
Alignment:
Q  175 ttaggcaagtgtatcaaat-cgttaccaagtaataaagtgataagtagagtatcatatcca 234  Q
    ||||||||||||||||||| | |||  ||||||||||||||||| ||||||||| ||||||    
T  22620258 ttaggcaagtgtatcaaattctttaaaaagtaataaagtgataactagagtatcgtatcca 22620318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 24267885 - 24267825
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatcca 234  Q
    |||| ||||||||||||||| || | ||||||||||| ||||||||| |||||||||||||    
T  24267885 ttagacaagtgtatcaaatcatttatcaagtaataaaatgataagtatagtatcatatcca 24267825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 236
Target Start/End: Original strand, 34480987 - 34481027
Alignment:
Q  196 ttaccaagtaataaagtgataagtagagtatcatatccaca 236  Q
    ||||||||||||||||||||||||||| ||| |||||||||    
T  34480987 ttaccaagtaataaagtgataagtagaatattatatccaca 34481027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 7491574 - 7491696
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgg 100  Q
    ||||||||||||||||||||||| |  ||||  ||||||||||| ||| | || |||||| ||| |||||||||||     ||||||| | |||||||      
T  7491574 tttgaatttactcttatctattt-tgttatgaactatttgtattgaaagtagagggtaattttgaaaagagaaaaaaccaacacaaaagagccaaaacat 7491672  T
Q  101 gttattttctttatatatagtata 124  Q
    |||||||| |||||||| ||||||    
T  7491673 gttattttatttatatacagtata 7491696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 8209628 - 8209671
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtatt 44  Q
    |||||||||| |||||| ||||| ||||||||||||||||||||    
T  8209628 tttgaatttattcttatgtatttgttatatgtgctatttgtatt 8209671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 10172238 - 10172167
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaa 76  Q
    |||||| |||||||||||| ||| ||||| ||||| ||||||||||||| || | | ||| |||||||||||    
T  10172238 aatttattcttatctatttgttacatgtgttatttctattaaaaattgagggcatttttgaaaagagaaaaa 10172167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 48
Target Start/End: Original strand, 13315394 - 13315437
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaa 48  Q
    ||||||||||||||||||| |||||| || ||||||||||||||    
T  13315394 aatttactcttatctatttgttatatatgttatttgtattaaaa 13315437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 236
Target Start/End: Original strand, 18825655 - 18825713
Alignment:
Q  178 ggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||||||||| ||| ||||| ||||||||||||||||||||||| |||||| ||||||||    
T  18825655 ggcaagtgtaccaa-tcgttgaccaagtaataaagtgataagtaaagtatcgtatccaca 18825713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 198 - 233
Target Start/End: Original strand, 22622910 - 22622945
Alignment:
Q  198 accaagtaataaagtgataagtagagtatcatatcc 233  Q
    |||||||||||||||||| |||||||||||||||||    
T  22622910 accaagtaataaagtgattagtagagtatcatatcc 22622945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 217
Target Start/End: Original strand, 33712659 - 33712702
Alignment:
Q  174 tttaggcaagtgtatcaaatcgttaccaagtaataaagtgataa 217  Q
    |||||||||||||| |||||| ||||||| ||||||||||||||    
T  33712659 tttaggcaagtgtaccaaatctttaccaaataataaagtgataa 33712702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 43416089 - 43416148
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaat 60  Q
    |||||||||||||||||| |||| ||||||||| |||||| ||| ||| |||| ||||||    
T  43416089 tttgaatttactcttatcaatttgttatatgtgttatttgcattgaaagttgagggtaat 43416148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 17605571 - 17605617
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaatt 51  Q
    |||||| |||||||||||||||| ||||| |||||||||| ||||||    
T  17605571 aatttattcttatctatttattacatgtggtatttgtatttaaaatt 17605617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 21847630 - 21847691
Alignment:
Q  175 ttaggcaagtgtatcaaatcg-ttaccaagtaataaagtgataagtagagtatcatatccaca 236  Q
    ||||||||||||| ||||||| |||||||||||||||||  ||||||||||||  ||||||||    
T  21847630 ttaggcaagtgtaccaaatcgtttaccaagtaataaagt-ctaagtagagtattgtatccaca 21847691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 236
Target Start/End: Original strand, 33190681 - 33190735
Alignment:
Q  183 gtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    ||||| ||||||||| | ||||||||||| ||||||||||||||| |||||||||    
T  33190681 gtgtaccaaatcgtttatcaagtaataaaatgataagtagagtataatatccaca 33190735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 9417236 - 9417187
Alignment:
Q  7 tttactcttatctatttattatatgtgctatttgtattaaaaattgaagg 56  Q
    |||| |||||||||||| ||||||||| |||||||||| ||| |||||||    
T  9417236 tttattcttatctatttgttatatgtgttatttgtattgaaatttgaagg 9417187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 126
Target Start/End: Complemental strand, 15874880 - 15874767
Alignment:
Q  13 cttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgggttattttcttt 112  Q
    ||||||||||| ||| ||||| |||||| ||| |||||||| | || | ||||||||||||||||   ||  |||| | |  |||  |||||||||||||    
T  15874880 cttatctatttgttacatgtgttatttgaattgaaaattgaggatatttttggaaagagaaaaaggcagcctaaaagaactgaaagaggttattttcttt 15874781  T
Q  113 atatatagtataga 126  Q
    ||||||| ||||||    
T  15874780 atatataatataga 15874767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 16143653 - 16143718
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaaga 70  Q
    |||||| |||||||||||| ||| ||||| |||||||||| |||||||| | || | |||||||||    
T  16143653 aatttattcttatctatttgttaaatgtgttatttgtattgaaaattgaggatatttttggaaaga 16143718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 16179010 - 16179063
Alignment:
Q  182 agtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatcca 234  Q
    |||||| ||||||||| | ||||||||||| |||||||||||||||| ||||||    
T  16179010 agtgtaccaaatcgtttaacaagtaataaactgataagtagagtatcgtatcca 16179063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 24162642 - 24162707
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaaga 70  Q
    |||||| |||||| ||||| ||| ||||| |||||||||| |||||| | |||| |||||||||||    
T  24162642 aatttattcttatatatttgttacatgtgttatttgtatttaaaattaagggtattcttggaaaga 24162707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 175 - 219
Target Start/End: Complemental strand, 26649073 - 26649028
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagt 219  Q
    |||| |||||||||||||||||| ||||||||||||| ||||||||    
T  26649073 ttagacaagtgtatcaaatcgtttaccaagtaataaaatgataagt 26649028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 37706227 - 37706280
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggta 58  Q
    |||||| |||||||||||| ||| ||||| |||||||||| |||||||| ||||    
T  37706227 aatttattcttatctatttgttacatgtgttatttgtattgaaaattgagggta 37706280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 49162561 - 49162496
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaaga 70  Q
    |||||| |||||||||||| ||| ||||| |||||| ||| |||||||| |||| | |||||||||    
T  49162561 aatttattcttatctatttgttacatgtgttatttgcattgaaaattgagggtattgttggaaaga 49162496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 236
Target Start/End: Original strand, 727489 - 727525
Alignment:
Q  200 caagtaataaagtgataagtagagtatcatatccaca 236  Q
    ||||||||||||||||||||||||||||  |||||||    
T  727489 caagtaataaagtgataagtagagtatcgcatccaca 727525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 128
Target Start/End: Complemental strand, 5257034 - 5256998
Alignment:
Q  92 ccaaaacgggttattttctttatatatagtatagata 128  Q
    |||||||||  ||||||||||||||||||||||||||    
T  5257034 ccaaaacggtctattttctttatatatagtatagata 5256998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 8573889 - 8573841
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattga 53  Q
    |||||| |||||||||||| ||| ||||| |||||||||| ||||||||    
T  8573889 aatttattcttatctatttgttacatgtgttatttgtattgaaaattga 8573841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 76
Target Start/End: Complemental strand, 15476300 - 15476236
Alignment:
Q  12 tcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaa 76  Q
    |||||||||||| ||| ||||| |||||||||| |||||||||| || | ||  |||||||||||    
T  15476300 tcttatctatttgttacatgtgttatttgtattgaaaattgaagatattttttaaaagagaaaaa 15476236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 238
Target Start/End: Complemental strand, 16069630 - 16069590
Alignment:
Q  198 accaagtaataaagtgataagtagagtatcatatccacagg 238  Q
    ||||||||||||||||||||||| | |||||||| ||||||    
T  16069630 accaagtaataaagtgataagtaaaatatcatatacacagg 16069590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 233
Target Start/End: Complemental strand, 21334819 - 21334763
Alignment:
Q  178 ggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatcc 233  Q
    ||||| ||||||||||| || | ||||||||||||||||||||| |||||| |||||    
T  21334819 ggcaaatgtatcaaatcatttatcaagtaataaagtgataagtatagtatcgtatcc 21334763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 34969542 - 34969606
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaag 69  Q
    |||||| |||||||||||| ||| ||||| ||||| |||| |||||||| |||| | ||||||||    
T  34969542 aatttattcttatctatttgttacatgtgttatttatattgaaaattgagggtatttttggaaag 34969606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 75
Target Start/End: Original strand, 44922869 - 44922909
Alignment:
Q  35 tatttgtattaaaaattgaaggtaatcttggaaagagaaaa 75  Q
    |||||||||| ||||||||||||| | ||||||||||||||    
T  44922869 tatttgtattgaaaattgaaggtatttttggaaagagaaaa 44922909  T

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Target: chr8 (Bit Score: 55; Significance: 1e-22; HSPs: 68)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 13369349 - 13369459
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgg 100  Q
    ||||||| ||||||||||||||||||||||||| |||||||||| ||| |||| |||||| ||| |||||||||||||  || ||||| | |||||||      
T  13369349 tttgaatgtactcttatctatttattatatgtgttatttgtattgaaagttgagggtaattttgaaaagagaaaaagtaagctcaaaagagccaaaacat 13369448  T
Q  101 gttattttctt 111  Q
    |||||||||||    
T  13369449 gttattttctt 13369459  T

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Target: chr8; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 2079507 - 2079583
Alignment:
Q  3 tgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagtt 79  Q
    |||||||||| |||||||||| ||||||||| |||||||||||||| |||| | |||| ||||||||||||||||||    
T  2079507 tgaatttacttttatctatttgttatatgtgttatttgtattaaaagttgaggctaattttggaaagagaaaaagtt 2079583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 175 - 238
Target Start/End: Complemental strand, 29382464 - 29382400
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagg 238  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  29382464 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacagg 29382400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 11941470 - 11941395
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaa 76  Q
    ||||||||||||||||||||||| ||||||||| |||||||||| ||| |||| |||||| ||| |||||||||||    
T  11941470 tttgaatttactcttatctatttgttatatgtgttatttgtattgaaagttgagggtaattttgaaaagagaaaaa 11941395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 164 - 236
Target Start/End: Complemental strand, 24110769 - 24110696
Alignment:
Q  164 tgatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||||||||| ||| |||||||||||||||| || ||||||||||||| |||||||||||||||| ||||||||    
T  24110769 tgatgtgcggattatgcaagtgtatcaaatcatttaccaagtaataaaatgataagtagagtatcgtatccaca 24110696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 238
Target Start/End: Complemental strand, 24114396 - 24114321
Alignment:
Q  164 tgatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagg 238  Q
    |||||||||| ||||||||||||| ||||| ||| ||||||||||||| |||||||||||||||| ||||| ||||    
T  24114396 tgatgtgcggattaggcaagtgtaccaaattgtttaccaagtaataaaatgataagtagagtatcgtatccgcagg 24114321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 181 - 234
Target Start/End: Complemental strand, 17101990 - 17101936
Alignment:
Q  181 aagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatcca 234  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  17101990 aagtgtatcaaatcgtttaccaagtaataaagtgataagtagagtatcgtatcca 17101936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 176 - 237
Target Start/End: Original strand, 24904630 - 24904692
Alignment:
Q  176 taggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacag 237  Q
    |||||||||||| |||||| || ||||| ||||||||||||||||||||||||||||||||||    
T  24904630 taggcaagtgtaccaaatcatttaccaaataataaagtgataagtagagtatcatatccacag 24904692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 180 - 226
Target Start/End: Complemental strand, 26615339 - 26615293
Alignment:
Q  180 caagtgtatcaaatcgttaccaagtaataaagtgataagtagagtat 226  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  26615339 caagtgtatcaaatcgttaccaactaataaagtgataagtagagtat 26615293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 30134375 - 30134297
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagtt 79  Q
    |||||| |||| | ||||||||| ||||||||| |||||||||| |||||||||| |||| ||| ||||||||||||||    
T  30134375 tttgaagttacacctatctatttgttatatgtgttatttgtattgaaaattgaagttaattttgcaaagagaaaaagtt 30134297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 15044486 - 15044563
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagt 78  Q
    |||||||||| |||||||||||| ||||||||| |||||||||| ||| |||| |||||| | ||||| |||||||||    
T  15044486 tttgaatttaatcttatctatttgttatatgtgttatttgtattgaaagttgagggtaatttcggaaaaagaaaaagt 15044563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 16243588 - 16243512
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaag 77  Q
    ||||||||||||||||||||||| ||| ||||| |||||||| | |||||||| |||| | || |||||||||||||    
T  16243588 tttgaatttactcttatctattttttacatgtgttatttgtactgaaaattgagggtattttttgaaagagaaaaag 16243512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 30806600 - 30806540
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatcca 234  Q
    ||||||||||||||||||||||| |  ||||||||||||||||||||||||||| ||||||    
T  30806600 ttaggcaagtgtatcaaatcgtttattaagtaataaagtgataagtagagtatcgtatcca 30806540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 34497111 - 34497171
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatcca 234  Q
    |||||||||| |||||||||||| |||||||||||||||||| ||||||||||| ||||||    
T  34497111 ttaggcaagtctatcaaatcgtttaccaagtaataaagtgattagtagagtatcgtatcca 34497171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 9187437 - 9187314
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgg 100  Q
    |||||||||||  |||||||||| |||||| || |||||||||| ||  |||| ||| || |||||| ||||||||||  |||||||  | ||||||  |    
T  9187437 tttgaatttacctttatctatttgttatatatgttatttgtattgaatgttgatggtgattttggaatgagaaaaagtcagcacaaatgagccaaaagag 9187338  T
Q  101 gttattttctttatatatagtata 124  Q
      ||||||||||||||||||||||    
T  9187337 actattttctttatatatagtata 9187314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 5850937 - 5850999
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||| |||||||| | ||||||| |||||||||||||||||||||||||||||| ||||||||    
T  5850937 ttagtcaagtgtacctaatcgtttaccaagtaataaagtgataagtagagtatcgtatccaca 5850999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 14528145 - 14528207
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    ||||||||||||  ||||||||| ||||||||||||||||||| |||||||||| ||||||||    
T  14528145 ttaggcaagtgtgccaaatcgtttaccaagtaataaagtgatacgtagagtatcgtatccaca 14528207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 198 - 236
Target Start/End: Original strand, 17509266 - 17509304
Alignment:
Q  198 accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||||||||||||||||||||||||||||||||||||||    
T  17509266 accaagtaataaagtgataagtagagtatcatatccaca 17509304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 23085815 - 23085740
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagt 78  Q
    |||||||| |||||||||||||| |||| |||  |||||||||||||||||||||| | | || ||||||||||||||    
T  23085815 tttgaattgactcttatctatttgttatgtgt--tatttgtattaaaaattgaaggcatttttagaaagagaaaaagt 23085740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 9788604 - 9788476
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgg 100  Q
    |||||||||||| |||||||||| |||||| | ||||||| ||| ||| |||| |||| || ||||| ||||||||||   | ||||| | ||||||  |    
T  9788604 tttgaatttactattatctatttgttatatttcctatttgcattgaaagttgagggtattc-tggaaggagaaaaagtcaacccaaaatagccaaaagag 9788506  T
Q  101 gttattttctttatatatagtatagatata 130  Q
      |||||| |||||||||||||||||||||    
T  9788505 actattttttttatatatagtatagatata 9788476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 26008018 - 26008071
Alignment:
Q  174 tttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtat 226  Q
    |||||||||||||| |||||| || |||||||||||||||||||||||||||||    
T  26008018 tttaggcaagtgtaccaaatcatttaccaagtaataaagtgataagtagagtat 26008071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 30783835 - 30783782
Alignment:
Q  184 tgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||| ||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  30783835 tgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccaca 30783782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 76
Target Start/End: Original strand, 4438077 - 4438148
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaa 76  Q
    |||||| ||||||||||||||||| |||| | |||||||| ||||||||| ||| | ||| |||||||||||    
T  4438077 aatttattcttatctatttattatgtgtgttgtttgtatttaaaattgaaagtatttttgaaaagagaaaaa 4438148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 11929823 - 11929866
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtatt 44  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||    
T  11929823 tttgaatttactcttatctatttgttatatgtgttatttgtatt 11929866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 236
Target Start/End: Original strand, 14006090 - 14006153
Alignment:
Q  174 tttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||||| |||||||||| ||| || ||||||||||||| |||||||||||||||||||| ||||    
T  14006090 tttaggtaagtgtatcatatcatttaccaagtaataaaatgataagtagagtatcatattcaca 14006153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 29905945 - 29905870
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaa 76  Q
    ||||||||||| ||||||||| | |||||||| ||||| ||||| ||| |||| | |||| |||||||||||||||    
T  29905945 tttgaatttacacttatctatatgttatatgttctattggtattgaaagttgaggttaattttggaaagagaaaaa 29905870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 4535831 - 4535793
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctattt 39  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  4535831 tttgaatttactcttatctatttattatatgtgttattt 4535793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 15238795 - 15238857
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    ||||||||||||||||||| ||| ||||||||| ||| ||||||||||| |||| ||||||||    
T  15238795 ttaggcaagtgtatcaaattgtttaccaagtaagaaaatgataagtagattatcgtatccaca 15238857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 17976615 - 17976677
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    ||||||||||||  |||||| || | |||||||||||||||||||||||||||| ||||||||    
T  17976615 ttaggcaagtgtgccaaatcatttatcaagtaataaagtgataagtagagtatcgtatccaca 17976677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 236
Target Start/End: Complemental strand, 30122257 - 30122196
Alignment:
Q  175 ttaggcaagtgtatcaaatcg-ttaccaagtaataaagtgataagtagagtatcatatccaca 236  Q
    ||||||||||||| ||||||  || ||||||||||||||| ||||||||||||||||||||||    
T  30122257 ttaggcaagtgtaccaaatcactttccaagtaataaagtg-taagtagagtatcatatccaca 30122196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 2637603 - 2637656
Alignment:
Q  184 tgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||||||||| ||| | |||||||||||||||||||||||||||| ||||||||    
T  2637603 tgtatcaaattgtttatcaagtaataaagtgataagtagagtatcgtatccaca 2637656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 76
Target Start/End: Complemental strand, 4418219 - 4418170
Alignment:
Q  27 atatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaa 76  Q
    ||||||| |||||||||||||| |||| |||||| |||||||||||||||    
T  4418219 atatgtgttatttgtattaaaagttgagggtaattttggaaagagaaaaa 4418170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 12838443 - 12838370
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagt 78  Q
    |||||| | |||||||||| ||||||||  |||||||||| |||||||| |||| | ||| |||||||||||||    
T  12838443 aatttatttttatctatttgttatatgtattatttgtattgaaaattgagggtatttttgaaaagagaaaaagt 12838370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 236
Target Start/End: Complemental strand, 13315105 - 13315033
Alignment:
Q  164 tgatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||||||||| ||||| ||||||| || ||| || ||||||||||||||||||||||| |||||| ||||||||    
T  13315105 tgatgtgcggattagg-aagtgtaccagatcatttaccaagtaataaagtgataagtatagtatcgtatccaca 13315033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 238
Target Start/End: Original strand, 24269585 - 24269657
Alignment:
Q  166 atgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagg 238  Q
    |||||| | ||||||||||||| |||||  || |||||||||||||||| ||||||||||||| ||||||||||    
T  24269585 atgtgcagattaggcaagtgtaccaaattatttaccaagtaataaagtg-taagtagagtatcgtatccacagg 24269657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 19786727 - 19786787
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatcca 234  Q
    |||| ||||| || ||||||||| ||||||||||||||||| ||||| |||||||||||||    
T  19786727 ttagacaagtataccaaatcgtttaccaagtaataaagtgacaagtaaagtatcatatcca 19786787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 28276860 - 28276801
Alignment:
Q  175 ttaggcaagtgtatcaaatcg-ttaccaagtaataaagtgataagtagagtatcatatcca 234  Q
    ||||||||||||||||||||| ||||||| ||| |||||||||||| ||||||| ||||||    
T  28276860 ttaggcaagtgtatcaaatcgtttaccaaataaaaaagtgataagt-gagtatcgtatcca 28276801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 191 - 238
Target Start/End: Original strand, 21314636 - 21314683
Alignment:
Q  191 aatcgttaccaagtaataaagtgataagtagagtatcatatccacagg 238  Q
    |||| |||||||||||||||||||||||||| ||||| |||| |||||    
T  21314636 aatcattaccaagtaataaagtgataagtagtgtatcgtatctacagg 21314683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 26169820 - 26169773
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattg 52  Q
    |||||| |||||||||||| ||| ||||| ||||||||||||||||||    
T  26169820 aatttattcttatctatttgttacatgtgttatttgtattaaaaattg 26169773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 32856815 - 32856854
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtatt 44  Q
    |||||| | |||||||||||||||||||||||||||||||    
T  32856815 aatttaattttatctatttattatatgtgctatttgtatt 32856854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 78
Target Start/End: Original strand, 45356665 - 45356735
Alignment:
Q  7 tttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagt 78  Q
    ||||||||||||||||| ||| ||||| | |||||||| ||| || | |||||| |||||||||||||||||    
T  45356665 tttactcttatctatttgttacatgtgtt-tttgtatttaaagttaagggtaattttggaaagagaaaaagt 45356735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 236
Target Start/End: Complemental strand, 5053024 - 5052962
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    ||||||||||||| ||||||||| |||  ||||||||||| ||||||||||||  ||||||||    
T  5053024 ttaggcaagtgtaccaaatcgtttaccgggtaataaagtgctaagtagagtattgtatccaca 5052962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 15837822 - 15837896
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagtt 79  Q
    |||||| | ||||| |||||||| ||||| ||||| |||| |||||||| |||| | ||| ||||||||||||||    
T  15837822 aatttatttttatcaatttattaaatgtgttatttttattgaaaattgagggtatttttgaaaagagaaaaagtt 15837896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 236
Target Start/End: Complemental strand, 24723520 - 24723482
Alignment:
Q  198 accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    ||||||||||||||||||||||| |||||| ||||||||    
T  24723520 accaagtaataaagtgataagtaaagtatcgtatccaca 24723482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 26527893 - 26527951
Alignment:
Q  12 tcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaaga 70  Q
    |||||||||||| ||| ||||| | |||||||| |||||||| |||||| |||||||||    
T  26527893 tcttatctatttgttacatgtgttgtttgtattgaaaattgagggtaattttggaaaga 26527951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 28969850 - 28969908
Alignment:
Q  12 tcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaaga 70  Q
    |||||||||||| ||||||||| |||||||||| |||||| | |||| | |||||||||    
T  28969850 tcttatctatttgttatatgtgttatttgtattgaaaatttagggtatttttggaaaga 28969908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 220
Target Start/End: Original strand, 30235373 - 30235419
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagta 220  Q
    |||||||||||||  |||||||| |||||||||||||||||||||||    
T  30235373 ttaggcaagtgtacaaaatcgtttaccaagtaataaagtgataagta 30235419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 33480737 - 33480691
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaatt 51  Q
    |||||| |||||||||||||||| ||||| |||||||||| ||||||    
T  33480737 aatttattcttatctatttattacatgtgttatttgtattgaaaatt 33480691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 38498203 - 38498157
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaatt 51  Q
    |||||| ||||||||||||| || ||||| |||||||||||||||||    
T  38498203 aatttattcttatctatttaatacatgtgttatttgtattaaaaatt 38498157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 39534449 - 39534495
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaatt 51  Q
    |||||| |||||||||||||||| ||||| |||||||||| ||||||    
T  39534449 aatttattcttatctatttattacatgtgttatttgtatttaaaatt 39534495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 130
Target Start/End: Complemental strand, 3739324 - 3739295
Alignment:
Q  101 gttattttctttatatatagtatagatata 130  Q
    ||||||||||||||||||||||||||||||    
T  3739324 gttattttctttatatatagtatagatata 3739295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 15898697 - 15898632
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaaga 70  Q
    |||||| |||||| ||||| ||| ||| | ||||||||||||||||||| |||| | |||||||||    
T  15898697 aatttattcttatttatttgttacatgggttatttgtattaaaaattgagggtatttttggaaaga 15898632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 16822938 - 16822991
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggta 58  Q
    |||||| |||||||||||| ||| ||||| |||||||||| |||||||| ||||    
T  16822938 aatttattcttatctatttgttacatgtgttatttgtattgaaaattgagggta 16822991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 25722675 - 25722622
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggta 58  Q
    |||||| |||||||||||| ||| ||||| |||||||||| |||||| ||||||    
T  25722675 aatttattcttatctatttgttacatgtgttatttgtattgaaaattaaaggta 25722622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 31288353 - 31288413
Alignment:
Q  174 tttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatcca 234  Q
    |||||| ||||||| ||||||||| |||||||||||||||| |||||| |||||| ||||||    
T  31288353 tttaggaaagtgtaccaaatcgtttaccaagtaataaagtg-taagtaaagtatcgtatcca 31288413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 32345334 - 32345379
Alignment:
Q  8 ttactcttatctatttattatatgtgctatttgtattaaaaattga 53  Q
    ||||| |||||||||| |||||||||||||||||||| ||| ||||    
T  32345334 ttacttttatctattttttatatgtgctatttgtattgaaagttga 32345379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 32361942 - 32361987
Alignment:
Q  8 ttactcttatctatttattatatgtgctatttgtattaaaaattga 53  Q
    ||||| |||||||||| |||||||||||||||||||| ||| ||||    
T  32361942 ttacttttatctattttttatatgtgctatttgtattgaaagttga 32361987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 36343440 - 36343493
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggta 58  Q
    |||||| || ||||||||| ||| ||||| ||||||||||||||||||| ||||    
T  36343440 aatttattcatatctatttgttacatgtgttatttgtattaaaaattgagggta 36343493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 36802238 - 36802173
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaaga 70  Q
    |||||| |||||| ||||| ||| ||||| | ||||||||||||||| |||||| | |||||||||    
T  36802238 aatttattcttatttatttgttacatgtgttgtttgtattaaaaattaaaggtatttttggaaaga 36802173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 42862510 - 42862457
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaa 54  Q
    ||||||||||||||||| ||||| ||||||||| ||||| || || ||||||||    
T  42862510 tttgaatttactcttatttatttgttatatgtgttatttatagtagaaattgaa 42862457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 132
Target Start/End: Complemental strand, 43921967 - 43921934
Alignment:
Q  99 gggttattttctttatatatagtatagatataaa 132  Q
    ||||| ||||||||||||||||||||||||||||    
T  43921967 gggttgttttctttatatatagtatagatataaa 43921934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 45488842 - 45488797
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaat 50  Q
    |||||| |||||||||||| ||| ||||| ||||||||||||||||    
T  45488842 aatttattcttatctatttgttacatgtgttatttgtattaaaaat 45488797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 130
Target Start/End: Complemental strand, 1170286 - 1170258
Alignment:
Q  102 ttattttctttatatatagtatagatata 130  Q
    |||||||||||||||||||||||||||||    
T  1170286 ttattttctttatatatagtatagatata 1170258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 236
Target Start/End: Original strand, 14075612 - 14075652
Alignment:
Q  196 ttaccaagtaataaagtgataagtagagtatcatatccaca 236  Q
    ||||||||||| ||||||||||||||| |||| ||||||||    
T  14075612 ttaccaagtaagaaagtgataagtagactatcgtatccaca 14075652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 232
Target Start/End: Complemental strand, 23893278 - 23893246
Alignment:
Q  200 caagtaataaagtgataagtagagtatcatatc 232  Q
    |||||||| ||||||||||||||||||||||||    
T  23893278 caagtaatgaagtgataagtagagtatcatatc 23893246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 232
Target Start/End: Original strand, 27659455 - 27659499
Alignment:
Q  189 caaatcgttacc-aagtaataaagtgataagtagagtatcatatc 232  Q
    |||||||||| | ||||||||||||||||||||||||||| ||||    
T  27659455 caaatcgttagcgaagtaataaagtgataagtagagtatcgtatc 27659499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 232
Target Start/End: Original strand, 28317432 - 28317467
Alignment:
Q  196 ttaccaagtaataaagtgataagtagagtatcatatc 232  Q
    |||||||||||||||||| ||||||||||||||||||    
T  28317432 ttaccaagtaataaagtg-taagtagagtatcatatc 28317467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 32889126 - 32889070
Alignment:
Q  14 ttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaaga 70  Q
    |||| ||||||||||||||| |||||||||| |||||| | |||| | |||||||||    
T  32889126 ttatatatttattatatgtgttatttgtatttaaaattaagggtatttttggaaaga 32889070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 4e-22; HSPs: 87)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 164 - 236
Target Start/End: Original strand, 21301903 - 21301976
Alignment:
Q  164 tgatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||||||||| ||||||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  21301903 tgatgtgcggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccaca 21301976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 164 - 236
Target Start/End: Complemental strand, 2167730 - 2167658
Alignment:
Q  164 tgatgtgcggtttaggcaagtgtatcaaatcgttaccaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||||||| | |||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  2167730 tgatgtgcagattagacaagtgtaccaaatcgttaccaagtaataaagtgataagtagagtatcgtatccaca 2167658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 19468244 - 19468319
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaa 76  Q
    |||||||||||||||||||| || |||||||||||||||||||| ||| |||| |||||| |||||||||||||||    
T  19468244 tttgaatttactcttatctaattgttatatgtgctatttgtattgaaagttgagggtaatattggaaagagaaaaa 19468319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 6289899 - 6289961
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  6289899 ttaggcaaatgtatcaaatcgtttaccaagtaataaagtgataagtagagtatcatatccaca 6289961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 164 - 236
Target Start/End: Complemental strand, 16245843 - 16245770
Alignment:
Q  164 tgatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||||||||| |||| |||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  16245843 tgatgtgcggattagacaagtgtaccaactcgtttaccaagtaataaagtgataagtagagtatcatatccaca 16245770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 124
Target Start/End: Complemental strand, 27398005 - 27397886
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgggtta 104  Q
    ||||||||||||| ||||| ||||||||  |||||||||| ||| || | |||||| ||||||||||||| | |   | ||||||| |||||||  ||||    
T  27398005 aatttactcttatttatttgttatatgtcttatttgtattgaaagtttagggtaatattggaaagagaaataatcaacccaaaaaagccaaaacatgtta 27397906  T
Q  105 ttttctttatatatagtata 124  Q
    ||||||||||||||||||||    
T  27397905 ttttctttatatatagtata 27397886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 175 - 236
Target Start/End: Complemental strand, 12805993 - 12805931
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    ||||||||||||| |||||| || |||||||||||||||||||||||||||||||||||||||    
T  12805993 ttaggcaagtgtaccaaatcatttaccaagtaataaagtgataagtagagtatcatatccaca 12805931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 29626023 - 29626145
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgg 100  Q
    ||||| |||| | |||| ||||| ||||||||| |||||||||| ||| |||||| |||| |||||||||||||||||  || ||||| |  |||| |      
T  29626023 tttgattttattattatatatttgttatatgtgttatttgtattgaaagttgaagataattttggaaagagaaaaagtcagcccaaaagagtcaaagcat 29626122  T
Q  101 gttattttctttatatatagtat 123  Q
    |||||||||||||||||||||||    
T  29626123 gttattttctttatatatagtat 29626145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 174 - 231
Target Start/End: Complemental strand, 51119346 - 51119289
Alignment:
Q  174 tttaggcaagtgtatcaaatcgttaccaagtaataaagtgataagtagagtatcatat 231  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  51119346 tttatgcaagtgtatcaaatcgttaccaaataataaagtgataagtaaagtatcatat 51119289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 13908328 - 13908269
Alignment:
Q  175 ttaggcaagtgtatcaaatcgttaccaagtaataaagtgataagtagagtatcatatcca 234  Q
    ||||| ||||||| |||||| || ||||||||||||||||||||||||||||||||||||    
T  13908328 ttaggaaagtgtaccaaatcttttccaagtaataaagtgataagtagagtatcatatcca 13908269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 181 - 236
Target Start/End: Complemental strand, 17438527 - 17438472
Alignment:
Q  181 aagtgtatcaaatcgttaccaagtaataaagtgataagtagagtatcatatccaca 236  Q
    ||||||| |||||||||||||||| ||||| |||||||||||||||||||||||||    
T  17438527 aagtgtaccaaatcgttaccaagttataaaatgataagtagagtatcatatccaca 17438472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 10917914 - 10917976
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    ||||||||||||| ||||||||| ||||| |||||||||||||||||||||||| ||||||||    
T  10917914 ttaggcaagtgtaccaaatcgtttaccaaataataaagtgataagtagagtatcgtatccaca 10917976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 122
Target Start/End: Original strand, 17438954 - 17439064
Alignment:
Q  12 tcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgggttattttctt 111  Q
    |||||||||||| ||| ||||| |||||||||| |||||||| |||||| ||||||||||  ||||   || ||||| | | ||||  ||||||||||||    
T  17438954 tcttatctatttgttacatgtgttatttgtattgaaaattgagggtaattttggaaagaggtaaagccagcccaaaagagctaaaagaggttattttctt 17439053  T
Q  112 tatatatagta 122  Q
    |||||||||||    
T  17439054 tatatatagta 17439064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 35380253 - 35380135
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgg 100  Q
    |||||| ||||| |||| ||||| |||||||||||||||||| | ||| ||||||||||| |||||||| ||||||  | |  ||||| | || |||||     
T  35380253 tttgaacttacttttatttatttgttatatgtgctatttgtaatgaaagttgaaggtaattttggaaagcgaaaaaaatagtccaaaagagccgaaacgt 35380154  T
Q  101 gttattttctttatatata 119  Q
    || ||||||||||||||||    
T  35380153 gtcattttctttatatata 35380135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 127
Target Start/End: Original strand, 5907502 - 5907621
Alignment:
Q  7 tttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgggttatt 106  Q
    |||| |||||||||||| ||||||||  |||||||||||||| ||||  | | | ||| |||||| |||||| ||| ||||||| |  ||| ||||| ||    
T  5907502 tttattcttatctatttgttatatgtattatttgtattaaaatttgagagcatttttgaaaagag-aaaagtcggcccaaaaaagctgaaaggggttgtt 5907600  T
Q  107 ttctttatatatagtatagat 127  Q
    |||||||||||||||||||||    
T  5907601 ttctttatatatagtatagat 5907621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 23267892 - 23267824
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaag 69  Q
    ||||||||||||||||||||||| ||||||||| |||||||||| |||||| |  ||||| ||||||||    
T  23267892 tttgaatttactcttatctatttgttatatgtgttatttgtattgaaaatttagagtaattttggaaag 23267824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 179 - 237
Target Start/End: Complemental strand, 11518060 - 11518001
Alignment:
Q  179 gcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacag 237  Q
    ||||||||| ||||||||| | ||||||||||||||||||||||| ||||||||||||||    
T  11518060 gcaagtgtaccaaatcgttcatcaagtaataaagtgataagtagaatatcatatccacag 11518001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 174 - 236
Target Start/End: Original strand, 12759382 - 12759445
Alignment:
Q  174 tttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    ||||| |||||||| ||||| ||| |||||||||||||||||||||||||||||| ||||||||    
T  12759382 tttagacaagtgtaccaaattgtttaccaagtaataaagtgataagtagagtatcgtatccaca 12759445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 162 - 236
Target Start/End: Complemental strand, 21303470 - 21303395
Alignment:
Q  162 actgatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||| ||||||| ||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| || |||||    
T  21303470 actggtgtgcggattatgcaagtgtatcaaatcgtttaccaaataataaaatgataagtagagtatcgtagccaca 21303395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 162 - 232
Target Start/End: Original strand, 41508350 - 41508421
Alignment:
Q  162 actgatgtgcggtttaggcaagtgtatcaaatcg-ttaccaagtaataaagtgataagtagagtatcatatc 232  Q
    |||||||||||| ||||||||||||| ||||||| ||| ||||||||||||||||| ||||| |||| ||||    
T  41508350 actgatgtgcggattaggcaagtgtaccaaatcgtttatcaagtaataaagtgataggtagaatatcgtatc 41508421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 236
Target Start/End: Original strand, 21083306 - 21083368
Alignment:
Q  174 tttaggcaagtgtatcaaatcgttaccaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||||||||||||| |||||||||||||| ||||||| ||| ||||| |||||| ||||||||    
T  21083306 tttaggcaagtgtaacaaatcgttaccaaataataaaatgacaagtaaagtatcgtatccaca 21083368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 175 - 227
Target Start/End: Original strand, 10744898 - 10744951
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatc 227  Q
    |||||||||| || ||||||||| ||||||||||||||||||||||||||||||    
T  10744898 ttaggcaagtttaccaaatcgtttaccaagtaataaagtgataagtagagtatc 10744951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 19224769 - 19224696
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagt 78  Q
    ||||||||||||||||  | ||||||||| ||||||||| |||||||||||||||| | |||| || |||||||    
T  19224769 aatttactcttatctacatgttatatgtgatatttgtatcaaaaattgaaggtaatttaggaaggaaaaaaagt 19224696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 22349410 - 22349467
Alignment:
Q  180 caagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||||||| ||||||||| ||||| |||||||||||||||||||||||| ||||||||    
T  22349410 caagtgtaccaaatcgtttaccaaataataaagtgataagtagagtatcgtatccaca 22349467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 28391171 - 28391118
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggta 58  Q
    |||||| |||| ||||||||||||||||| ||||||||||||||||||| ||||    
T  28391171 aatttattcttgtctatttattatatgtgttatttgtattaaaaattgagggta 28391118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 49758603 - 49758680
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagt 78  Q
    ||||||||||||||||||||||| ||||||||| ||||||| || ||| |||| | |||| || |||| |||||||||    
T  49758603 tttgaatttactcttatctatttgttatatgtgttatttgttttgaaagttgaggataattttagaaacagaaaaagt 49758680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 196 - 236
Target Start/End: Complemental strand, 821595 - 821555
Alignment:
Q  196 ttaccaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  821595 ttaccaagtaataaagtgataagtagagtatcgtatccaca 821555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 177 - 236
Target Start/End: Original strand, 12411149 - 12411209
Alignment:
Q  177 aggcaagtgtatcaaatcg-ttaccaagtaataaagtgataagtagagtatcatatccaca 236  Q
    ||||||||||| ||||||  |||||||||||||||||||| ||||||||||| ||||||||    
T  12411149 aggcaagtgtaccaaatcacttaccaagtaataaagtgattagtagagtatcgtatccaca 12411209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 21969441 - 21969329
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgg 100  Q
    ||||||||||||||||| ||||| |||| ||| ||||||||||| ||| |||| |||||| || ||||||  ||||||   | ||||| | |||||||      
T  21969441 tttgaatttactcttatatatttgttatgtgttctatttgtattgaaagttgagggtaattttagaaagatgaaaagtcaacccaaaatagccaaaacat 21969342  T
Q  101 gttattttcttta 113  Q
    |||||||||||||    
T  21969341 gttattttcttta 21969329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 21991877 - 21991765
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgg 100  Q
    ||||||||||||||||| ||||| |||| ||| ||||||||||| ||| |||| |||||| || ||||||  ||||||   | ||||| | |||||||      
T  21991877 tttgaatttactcttatatatttgttatgtgttctatttgtattgaaagttgagggtaattttagaaagatgaaaagtcaacccaaaatagccaaaacat 21991778  T
Q  101 gttattttcttta 113  Q
    |||||||||||||    
T  21991777 gttattttcttta 21991765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 178 - 236
Target Start/End: Original strand, 8770019 - 8770077
Alignment:
Q  178 ggcaagtgtatcaaatcgtta-ccaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||||||||| ||| |||||| |||||||||||||||||||||| |||||||||||||||    
T  8770019 ggcaagtgtaccaa-tcgttaaccaagtaataaagtgataagtaaagtatcatatccaca 8770077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 236
Target Start/End: Complemental strand, 18458536 - 18458465
Alignment:
Q  166 atgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    ||||| || |||| |||||||| ||||| ||| | |||||||||||||||||||||||||||| ||||||||    
T  18458536 atgtgtggattagacaagtgtaccaaattgtttatcaagtaataaagtgataagtagagtatcgtatccaca 18458465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 76
Target Start/End: Original strand, 27400250 - 27400321
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaa 76  Q
    |||||| |||||||||||| ||| ||||| |||||||| |||||||| | |||| | |||||||||||||||    
T  27400250 aatttattcttatctatttgttacatgtgttatttgtagtaaaaatttagggtatttttggaaagagaaaaa 27400321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 236
Target Start/End: Original strand, 28728939 - 28729002
Alignment:
Q  174 tttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    ||||||||||||| ||||||  || | |||||||||||||||||||||||||||| ||||||||    
T  28728939 tttaggcaagtgtgtcaaataatttatcaagtaataaagtgataagtagagtatcgtatccaca 28729002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 34667330 - 34667256
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaa 76  Q
    |||||||||| | |||||||||| ||||||| |||||||||||| ||| |||| |||||| |||| ||||||||||    
T  34667330 tttgaatttatttttatctatttgttatatgcgctatttgtattgaaagttgatggtaattttgg-aagagaaaaa 34667256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 53
Target Start/End: Complemental strand, 51006047 - 51006000
Alignment:
Q  6 atttactcttatctatttattatatgtgctatttgtattaaaaattga 53  Q
    ||||| |||||||||||| ||||||||| |||||||||||||||||||    
T  51006047 atttattcttatctatttgttatatgtgttatttgtattaaaaattga 51006000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 124
Target Start/End: Complemental strand, 18956829 - 18956711
Alignment:
Q  6 atttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgggttat 105  Q
    ||||| |||||||||||| ||| ||||| |||||||||| |||||||| || | | ||||||| |||||| ||   | ||||| | |  |||  ||||||    
T  18956829 atttattcttatctatttgttacatgtgttatttgtattgaaaattgatggcatttttggaaatagaaaaggtcaacccaaaagagctgaaagaggttat 18956730  T
Q  106 tttctttatatatagtata 124  Q
    |||||||||||||||||||    
T  18956729 tttctttatatatagtata 18956711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 21325336 - 21325398
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    ||||||||||||| ||||| ||| ||||||||||||| ||||||||| |||||| ||||||||    
T  21325336 ttaggcaagtgtaccaaattgtttaccaagtaataaactgataagtatagtatcgtatccaca 21325398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 127
Target Start/End: Complemental strand, 24487693 - 24487571
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgggtta 104  Q
    |||||| |||||||||||| ||| ||||| |||||||||| |||||||| |  | | ||  ||||||||||||| |||  |||| | |  ||| | |||     
T  24487693 aatttattcttatctatttgttacatgtgttatttgtattgaaaattgaggacattttttaaaagagaaaaagtcggcctaaaagagcttaaatgagttg 24487594  T
Q  105 ttttctttatatatagtatagat 127  Q
    |||||||||||||||||||||||    
T  24487593 ttttctttatatatagtatagat 24487571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 75
Target Start/End: Original strand, 4578033 - 4578094
Alignment:
Q  14 ttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaa 75  Q
    |||||||||||||| ||||| ||||| |||| |||||||| |||| | ||||||||||||||    
T  4578033 ttatctatttattacatgtgttatttatattgaaaattgagggtatttttggaaagagaaaa 4578094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 130
Target Start/End: Original strand, 7791470 - 7791595
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgggtta 104  Q
    ||||||||||||| ||||| | ||||||| |||||||||  ||| ||||  ||||| | | |||||||||||| |    ||||| |   |||||  ||||    
T  7791470 aatttactcttatatatttgtcatatgtgatatttgtatcgaaagttgagtgtaatttcgtaaagagaaaaagctaatccaaaagaggaaaaacatgtta 7791569  T
Q  105 ttttctttatatatagtatagatata 130  Q
    ||||||||||||||||||||||||||    
T  7791570 ttttctttatatatagtatagatata 7791595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 261110 - 261062
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattga 53  Q
    |||||| |||||||||||||||| ||||| |||||||||| ||||||||    
T  261110 aatttattcttatctatttattacatgtgttatttgtattgaaaattga 261062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 238
Target Start/End: Complemental strand, 3116521 - 3116458
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagg 238  Q
    ||||||||||||| ||||| ||| |||||||||||||||||||||| ||||||  ||||||||||    
T  3116521 ttaggcaagtgtaccaaattgtttaccaagtaataaagtgataagt-gagtatagtatccacagg 3116458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 236
Target Start/End: Complemental strand, 8557210 - 8557170
Alignment:
Q  196 ttaccaagtaataaagtgataagtagagtatcatatccaca 236  Q
    ||||| |||||||||||||||||||||||||| ||||||||    
T  8557210 ttaccgagtaataaagtgataagtagagtatcgtatccaca 8557170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 13367776 - 13367844
Alignment:
Q  7 tttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaa 75  Q
    ||||||||||||  ||| |||||| || |||||||||| ||| ||||||||||| ||| ||||||||||    
T  13367776 tttactcttatcagtttgttatatatgttatttgtatttaaagttgaaggtaattttgaaaagagaaaa 13367844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 19559167 - 19559103
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaag 69  Q
    |||||| ||||||||||||||||  |||| |||||||||||||||| || |||| | ||||||||    
T  19559167 aatttattcttatctatttattacctgtgttatttgtattaaaaatagagggtatttttggaaag 19559103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 236
Target Start/End: Complemental strand, 27543011 - 27542956
Alignment:
Q  181 aagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    ||||||||||||||||| |||||| |||||||| |||||||||||||| ||||||||    
T  27543011 aagtgtatcaaatcgtttaccaagaaataaagt-ataagtagagtatcgtatccaca 27542956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 40360198 - 40360150
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattga 53  Q
    |||||| |||||||||||||||| ||||| |||||||||| ||||||||    
T  40360198 aatttattcttatctatttattacatgtgttatttgtattgaaaattga 40360150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 45879659 - 45879547
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgg 100  Q
    |||||||||||||| || ||||| |||||| | ||||||||||| ||| | || |||||| ||  |||||||||||||   ||||||| | |||||||      
T  45879659 tttgaatttactctaatatatttgttatatatactatttgtattgaaagtcgagggtaattttaaaaagagaaaaagtcaacacaaaatagccaaaacat 45879560  T
Q  101 gttattttcttta 113  Q
    | |||||||||||    
T  45879559 gctattttcttta 45879547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 12565816 - 12565847
Alignment:
Q  99 gggttattttctttatatatagtatagatata 130  Q
    ||||||||||||||||||||||||||||||||    
T  12565816 gggttattttctttatatatagtatagatata 12565847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 13155735 - 13155766
Alignment:
Q  99 gggttattttctttatatatagtatagatata 130  Q
    ||||||||||||||||||||||||||||||||    
T  13155735 gggttattttctttatatatagtatagatata 13155766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 13260219 - 13260250
Alignment:
Q  99 gggttattttctttatatatagtatagatata 130  Q
    ||||||||||||||||||||||||||||||||    
T  13260219 gggttattttctttatatatagtatagatata 13260250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 21967255 - 21967212
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtatt 44  Q
    |||||||||||| |||||||||| ||||||||| ||||||||||    
T  21967255 tttgaatttacttttatctatttgttatatgtgttatttgtatt 21967212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 21989691 - 21989648
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtatt 44  Q
    |||||||||||| |||||||||| ||||||||| ||||||||||    
T  21989691 tttgaatttacttttatctatttgttatatgtgttatttgtatt 21989648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 24171207 - 24171160
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattg 52  Q
    |||||| |||||||||||| ||| ||||| ||||||||||||||||||    
T  24171207 aatttattcttatctatttgttacatgtgttatttgtattaaaaattg 24171160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 236
Target Start/End: Complemental strand, 52517880 - 52517834
Alignment:
Q  189 caaatcgttaccaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||||||||| |||||||||||||||||||| ||||||| ||||||||    
T  52517880 caaatcgttatcaagtaataaagtgataagt-gagtatcgtatccaca 52517834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 2513595 - 2513641
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaa 47  Q
    ||||||||| ||||||||||||| ||| ||||||||||| |||||||    
T  2513595 tttgaattttctcttatctatttgttacatgtgctatttatattaaa 2513641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 238
Target Start/End: Original strand, 4650249 - 4650291
Alignment:
Q  196 ttaccaagtaataaagtgataagtagagtatcatatccacagg 238  Q
    |||||||||||||||||||| |||| |||||| ||||||||||    
T  4650249 ttaccaagtaataaagtgatgagtaaagtatcgtatccacagg 4650291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 5508332 - 5508393
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtta-ccaagtaataaagtgataagtagagtatcatatccaca 236  Q
    ||||||||||||| |||||| ||  ||||||||||||||||||||| |||||| |||||||||    
T  5508332 ttaggcaagtgtaccaaatcatttgccaagtaataaagtgataagt-gagtataatatccaca 5508393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 238
Target Start/End: Complemental strand, 8889229 - 8889191
Alignment:
Q  200 caagtaataaagtgataagtagagtatcatatccacagg 238  Q
    |||||||||||||||||||||||||||  ||||||||||    
T  8889229 caagtaataaagtgataagtagagtattgtatccacagg 8889191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 12673215 - 12673169
Alignment:
Q  12 tcttatctatttattatatgtgctatttgtattaaaaattgaaggta 58  Q
    ||||||| |||| ||| ||||| ||||||||||||||||||||||||    
T  12673215 tcttatcaatttgttacatgtgttatttgtattaaaaattgaaggta 12673169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 21030806 - 21030860
Alignment:
Q  24 attatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagt 78  Q
    |||| |||||||||||||||| ||||||||||||| | || ||||||| ||||||    
T  21030806 attacatgtgctatttgtattgaaaattgaaggtatttttagaaagagtaaaagt 21030860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 236
Target Start/End: Complemental strand, 21825971 - 21825910
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    ||||| ||||||| ||||||||| ||| |||||||||||| ||||||||||||| ||||||||    
T  21825971 ttaggtaagtgtaccaaatcgtttaccgagtaataaagtg-taagtagagtatcgtatccaca 21825910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 10824109 - 10824036
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagt 78  Q
    |||||| | |||||||||| ||| ||||| |||||||||| |||||||| || | | ||| |||||||||||||    
T  10824109 aatttatttttatctatttgttacatgtgttatttgtattgaaaattgatggcatttttgaaaagagaaaaagt 10824036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 14899679 - 14899626
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggta 58  Q
    |||||| |||||||||||| ||| ||||| |||||||||| |||||||| ||||    
T  14899679 aatttattcttatctatttgttacatgtgttatttgtattcaaaattgagggta 14899626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 77
Target Start/End: Original strand, 15522151 - 15522216
Alignment:
Q  12 tcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaag 77  Q
    |||||| ||||| ||| ||||| ||||||||||||||||| | || ||| ||| ||||||||||||    
T  15522151 tcttatgtatttgttacatgtgttatttgtattaaaaattaagggcaattttgaaaagagaaaaag 15522216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 175 - 239
Target Start/End: Complemental strand, 18736774 - 18736710
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacaggt 239  Q
    |||| |||||||| ||||||||| ||||||||||||||| ||||||||| |||| |||| ||||||    
T  18736774 ttagacaagtgtaccaaatcgtttaccaagtaataaagt-ataagtagaatatcgtatctacaggt 18736710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 21092180 - 21092253
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagt 78  Q
    |||||| |||| |||||||  || |||||||||||||||| |||||||| |||| | ||| ||| |||||||||    
T  21092180 aatttattcttgtctatttgctacatgtgctatttgtatttaaaattgagggtatttttgaaaaaagaaaaagt 21092253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 28310131 - 28310208
Alignment:
Q  1 tttgaattta-ctcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaag 77  Q
    |||||||||| || |||||||||| |||||||||||||||  ||| |||||||| | |||| | | ||||||||||||    
T  28310131 tttgaatttaacttttatctatttgttatatgtgctatttaaatttaaaattgaggataatttagaaaagagaaaaag 28310208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 54982388 - 54982312
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagt 78  Q
    ||||||||||||||||| ||||| |||| |||  | |||||||| ||| |||| |||||| | |||||||||||||||    
T  54982388 tttgaatttactcttatatatttgttatgtgttat-tttgtatttaaatttgagggtaatttaggaaagagaaaaagt 54982312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 796312 - 796264
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattga 53  Q
    |||||| |||||||||||||||| ||||| | ||| |||||||||||||    
T  796312 aatttattcttatctatttattacatgtgttctttctattaaaaattga 796264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 76
Target Start/End: Original strand, 12565733 - 12565797
Alignment:
Q  12 tcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaa 76  Q
    |||||||||||| | ||||||| || ||||||| |||||||| ||||   |||||||||||||||    
T  12565733 tcttatctatttgtaatatgtgttaattgtattgaaaattgagggtatatttggaaagagaaaaa 12565797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 76
Target Start/End: Original strand, 13155659 - 13155723
Alignment:
Q  12 tcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaa 76  Q
    |||||||||||| ||||||||| || ||||||| ||||||||  |||   |||||||||||||||    
T  13155659 tcttatctatttgttatatgtgttaattgtattgaaaattgagagtatatttggaaagagaaaaa 13155723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 76
Target Start/End: Original strand, 13260136 - 13260200
Alignment:
Q  12 tcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaa 76  Q
    |||||||||||| | ||||||| || ||||||| |||||||| ||||   |||||||||||||||    
T  13260136 tcttatctatttgtaatatgtgttaattgtattgaaaattgagggtatatttggaaagagaaaaa 13260200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 14418875 - 14418823
Alignment:
Q  19 tatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagag 71  Q
    ||||||||||||||||||||||||||  || |||| |||||| ||| ||||||    
T  14418875 tatttattatatgtgctatttgtattgcaagttgacggtaattttgaaaagag 14418823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 15569608 - 15569544
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaag 69  Q
    |||||| |||||| ||||| ||| ||||| ||||| ||||||||||||| |||| | ||||||||    
T  15569608 aatttattcttatttatttgttacatgtgttatttatattaaaaattgagggtatttttggaaag 15569544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 18387131 - 18387175
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaa 49  Q
    ||||||||||||| ||||| ||||||||| ||| |||||||||||    
T  18387131 aatttactcttatatatttgttatatgtgttatatgtattaaaaa 18387175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 236
Target Start/End: Complemental strand, 19171915 - 19171875
Alignment:
Q  196 ttaccaagtaataaagtgataagtagagtatcatatccaca 236  Q
    ||||||||||||||||||||||| |||| ||||||| ||||    
T  19171915 ttaccaagtaataaagtgataagcagaggatcatattcaca 19171875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 232
Target Start/End: Original strand, 20429728 - 20429764
Alignment:
Q  196 ttaccaagtaataaagtgataagtagagtatcatatc 232  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  20429728 ttaccaagtaataaaatgataagtagagtatcgtatc 20429764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 21080484 - 21080428
Alignment:
Q  17 tctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaa 73  Q
    ||||||| |||||||||||||||| ||||||  |||| |||||| |||||| |||||    
T  21080484 tctatttgttatatgtgctatttgcattaaatgttgagggtaattttggaaggagaa 21080428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 21085073 - 21085017
Alignment:
Q  17 tctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaa 73  Q
    ||||||| |||||||||||||||| ||||||  |||| |||||| |||||| |||||    
T  21085073 tctatttgttatatgtgctatttgcattaaatgttgagggtaattttggaaggagaa 21085017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 21595326 - 21595374
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattga 53  Q
    |||||| |||||||||||| ||| ||||| |||||||||| ||||||||    
T  21595326 aatttattcttatctatttgttacatgtgttatttgtattgaaaattga 21595374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 21824623 - 21824671
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattga 53  Q
    |||||| |||||||||||| ||| ||||| |||||||||| ||||||||    
T  21824623 aatttattcttatctatttgttacatgtgttatttgtatttaaaattga 21824671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 22525979 - 22525931
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattga 53  Q
    |||||| |||||||||||| ||| ||||| ||||| |||||||||||||    
T  22525979 aatttattcttatctatttgttacatgtgttatttctattaaaaattga 22525931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 28370278 - 28370230
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattga 53  Q
    |||||| |||| ||||||||||||||||  |||||||||| ||||||||    
T  28370278 aatttattcttgtctatttattatatgtattatttgtattgaaaattga 28370230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 28378096 - 28378048
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattga 53  Q
    |||||| |||| ||||||||||||||||  |||||||||| ||||||||    
T  28378096 aatttattcttgtctatttattatatgtattatttgtattgaaaattga 28378048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 28385918 - 28385870
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattga 53  Q
    |||||| |||| ||||||||||||||||  |||||||||| ||||||||    
T  28385918 aatttattcttgtctatttattatatgtattatttgtattgaaaattga 28385870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 2e-20; HSPs: 88)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 6788445 - 6788371
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaa 75  Q
    |||||||||||||||||||||||| |||||||||||||| |||| |||||||| |||||| || |||||||||||    
T  6788445 tttgaatttactcttatctatttaatatatgtgctatttttattgaaaattgagggtaattttagaaagagaaaa 6788371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 175 - 236
Target Start/End: Complemental strand, 13692772 - 13692710
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  13692772 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcatatccaca 13692710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 162 - 236
Target Start/End: Complemental strand, 24639569 - 24639495
Alignment:
Q  162 actgatgtgcggtttaggcaagtgtatcaaatcgttaccaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||||||||| | ||||  |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  24639569 actgatgtgctgattagagaagtgtatcaaatcattaccaagtaataaagtgataagtagagtatcgtatccaca 24639495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 47044477 - 47044553
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagt 78  Q
    ||||||||||||||||| ||||| |||||||||||||||||||| |||||||| |||||| ||| |||||||||||||    
T  47044477 tttgaatttactcttatatatttgttatatgtgctatttgtattgaaaattgagggtaat-ttgaaaagagaaaaagt 47044553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 53451115 - 53451038
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagt 78  Q
    ||||||||||||||||||||||| ||||||||| |||||||||| ||| |||| |||||| |||| ||||||||||||    
T  53451115 tttgaatttactcttatctatttgttatatgtgttatttgtattgaaagttgagggtaattttgggaagagaaaaagt 53451038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 175 - 238
Target Start/End: Original strand, 14648891 - 14648955
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagg 238  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  14648891 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacagg 14648955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 893769 - 893646
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgg 100  Q
    |||||||||| ||||||| |||| || |||||| ||||| |||| ||| |||| |  ||| |||||||||||||||||| || ||||| | || ||| ||    
T  893769 tttgaatttattcttatccatttgttgtatgtgttatttatattgaaacttgatgacaattttggaaagagaaaaagttagctcaaaagagccgaaaggg 893670  T
Q  101 gttattttctttatatatagtata 124  Q
     ||||||||||||||| |||||||    
T  893669 tttattttctttatatgtagtata 893646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 162 - 236
Target Start/End: Original strand, 17671985 - 17672060
Alignment:
Q  162 actgatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||||||  ||| ||||||||||||| ||||||||| |||||||||||||||||||||||||||||  ||||||||    
T  17671985 actgatggccggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtattgtatccaca 17672060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 20818389 - 20818456
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaa 68  Q
    ||||||||||||| |||||||||||| |||||||||||| |||||||| |||| |||||| |||||||    
T  20818389 tttgaatttactcgtatctatttattgtatgtgctatttatattaaaagttgagggtaattttggaaa 20818456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 24637786 - 24637659
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaa-agagaaaaagttggcacaaaaaatccaaaacg 99  Q
    ||||||||||||||||||||||| || |||||| |||||||||| ||| ||||||||||| ||||||  | |||||| |  || ||||  | ||||||      
T  24637786 tttgaatttactcttatctatttgttgtatgtgttatttgtattgaaagttgaaggtaattttggaagggggaaaaaatcagcccaaaggagccaaaaaa 24637687  T
Q  100 ggttattttctttatatatagtatagat 127  Q
     | |||||||||||||||||||||||||    
T  24637686 agctattttctttatatatagtatagat 24637659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 40227762 - 40227817
Alignment:
Q  164 tgatgtgcggtttaggcaagtgtatcaaatcgttaccaagtaataaagtgataagt 219  Q
    ||||||| || ||||||||||||| |||||||||||||||||||||||||||||||    
T  40227762 tgatgtgaggattaggcaagtgtaccaaatcgttaccaagtaataaagtgataagt 40227817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 13908854 - 13908912
Alignment:
Q  179 gcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  13908854 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccaca 13908912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 26510435 - 26510561
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgg 100  Q
    ||||||||||||||||||||||| ||||||||| |||||||||| ||| ||||  ||| | ||| |||||||||||||     ||||| | |  ||| |     
T  26510435 tttgaatttactcttatctatttgttatatgtgatatttgtattgaaagttgagagtagttttgaaaagagaaaaagtcaattcaaaagagctgaaaaga 26510534  T
Q  101 gttattttctttatatatagtatagat 127  Q
    |||||||| ||||||||||||||||||    
T  26510535 gttattttatttatatatagtatagat 26510561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 54983139 - 54983015
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgg 100  Q
    ||||||||||||||||||||||| ||||||||  |||||| |||||||||||| |||||| ||| ||  | |||||||  || ||||| |  ||||| ||    
T  54983139 tttgaatttactcttatctatttgttatatgtattatttgcattaaaaattgagggtaattttgcaataacaaaaagtcagcccaaaaga-gcaaaaggg 54983041  T
Q  101 gttattttctttatatatagtataga 126  Q
      ||||||||||||||||| ||||||    
T  54983040 actattttctttatatataatataga 54983015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 196 - 236
Target Start/End: Original strand, 7582315 - 7582355
Alignment:
Q  196 ttaccaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  7582315 ttaccaagtaataaagtgataagtagagtatcatatccaca 7582355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 52793959 - 52794031
Alignment:
Q  4 gaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaa 76  Q
    |||| |||| ||||| |||||||||||||| |||||||||| ||| ||||||||||| ||| |||||||||||    
T  52793959 gaatatacttttatccatttattatatgtgatatttgtattgaaagttgaaggtaattttgaaaagagaaaaa 52794031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 2011911 - 2012038
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgg 100  Q
    |||||||||| |||||| ||||| |||||||||  ||||||||| ||| |||| |||||| ||  |||||||||||||     ||||| |  ||||||      
T  2011911 tttgaatttattcttatttatttgttatatgtgtaatttgtattgaaagttgagggtaattttaaaaagagaaaaagtcaatccaaaagaggcaaaacat 2012010  T
Q  101 gttattttctttatatatagtatagata 128  Q
    |||||||||||| |||||||||||||||    
T  2012011 gttattttctttgtatatagtatagata 2012038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 178 - 236
Target Start/End: Original strand, 17216816 - 17216875
Alignment:
Q  178 ggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    ||||| |||| ||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  17216816 ggcaaatgtaccaaatcgtttaccaagcaataaagtgataagtagagtatcatatccaca 17216875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 54856239 - 54856168
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaa 76  Q
    |||||| |||||||||||||||| ||||| ||||||||| ||||||||| |||| | |||||||||| ||||    
T  54856239 aatttattcttatctatttattacatgtgttatttgtatgaaaaattgatggtatttttggaaagaggaaaa 54856168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 236
Target Start/End: Complemental strand, 13992991 - 13992917
Alignment:
Q  163 ctgatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    ||||||||||| | ||| ||||||| ||||| ||| |||||||||||||||| ||||||||||||| ||||||||    
T  13992991 ctgatgtgcggatgaggtaagtgtaccaaattgtttaccaagtaataaagtggtaagtagagtatcgtatccaca 13992917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 20315000 - 20315058
Alignment:
Q  179 gcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    ||||||||| ||||||||| ||||||||||||| ||||||||||| |||||||||||||    
T  20315000 gcaagtgtaccaaatcgtttaccaagtaataaattgataagtagaatatcatatccaca 20315058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 34409971 - 34410049
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagtt 79  Q
    ||||||||||||||||||||||| ||||||||| |||||||||| ||| ||||  ||||| |||| || | ||||||||    
T  34409971 tttgaatttactcttatctatttgttatatgtgttatttgtattgaaagttgagagtaattttgggaacaaaaaaagtt 34410049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 143647 - 143720
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagt 78  Q
    |||||| |||||||||||| ||||||||| ||||| |||| |||||||| |||| | ||| |||||||||||||    
T  143647 aatttattcttatctatttgttatatgtgttatttatattgaaaattgagggtatttttgaaaagagaaaaagt 143720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 181 - 237
Target Start/End: Original strand, 11093966 - 11094023
Alignment:
Q  181 aagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacag 237  Q
    ||||||||||||||||| ||||||||||||| ||||| ||||||| ||||||||||||    
T  11093966 aagtgtatcaaatcgtttaccaagtaataaaatgataggtagagtgtcatatccacag 11094023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 164 - 236
Target Start/End: Complemental strand, 12578380 - 12578307
Alignment:
Q  164 tgatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    ||||||| || ||||||||||||| |||||| || ||||| |||||||||||||| ||||||||| ||||||||    
T  12578380 tgatgtgaggattaggcaagtgtaccaaatcatttaccaaataataaagtgataattagagtatcgtatccaca 12578307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 19438029 - 19438082
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggta 58  Q
    |||||| |||||||||||||||| ||||| ||||||||||||||||||| ||||    
T  19438029 aatttattcttatctatttattacatgtgttatttgtattaaaaattgagggta 19438082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 19492798 - 19492741
Alignment:
Q  180 caagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||||||| ||||||||| |||||||||||||| ||||||||||||||| ||||||||    
T  19492798 caagtgtaccaaatcgtttaccaagtaataaagggataagtagagtatcgtatccaca 19492741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 164 - 236
Target Start/End: Complemental strand, 19562292 - 19562219
Alignment:
Q  164 tgatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||||||||| ||| ||||||||| |||||| || ||||||||||||||||||||||| |||||| | ||||||    
T  19562292 tgatgtgcggattaagcaagtgtaccaaatcatttaccaagtaataaagtgataagtaaagtatcgtgtccaca 19562219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 175 - 238
Target Start/End: Original strand, 11490528 - 11490592
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagg 238  Q
    ||||| ||||||| ||||| ||| | |||||||||||||||||||||||||||| ||||||||||    
T  11490528 ttaggaaagtgtaccaaattgtttatcaagtaataaagtgataagtagagtatcgtatccacagg 11490592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 175 - 226
Target Start/End: Original strand, 12318429 - 12318481
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtta-ccaagtaataaagtgataagtagagtat 226  Q
    ||||||||||||| |||||| ||| ||||||||||||||||||||||||||||    
T  12318429 ttaggcaagtgtaccaaatcattaaccaagtaataaagtgataagtagagtat 12318481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 175 - 226
Target Start/End: Complemental strand, 13128977 - 13128925
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtat 226  Q
    ||||||||||||| ||||||||| ||||||||||||| |||||||||||||||    
T  13128977 ttaggcaagtgtaccaaatcgtttaccaagtaataaaatgataagtagagtat 13128925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 179 - 226
Target Start/End: Original strand, 17709757 - 17709805
Alignment:
Q  179 gcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtat 226  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  17709757 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtat 17709805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 236
Target Start/End: Original strand, 19900575 - 19900637
Alignment:
Q  174 tttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||||||||||||| ||||| ||| |||||||||||||||| ||||||||||||||||| ||||    
T  19900575 tttaggcaagtgtaccaaattgtttaccaagtaataaagtg-taagtagagtatcatattcaca 19900637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 76
Target Start/End: Original strand, 21954704 - 21954775
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaa 76  Q
    |||||| |||||||||||| ||| ||||| |||||||||| |||||||| || | | |||||||||||||||    
T  21954704 aatttattcttatctatttgttacatgtgttatttgtattgaaaattgatggcatttttggaaagagaaaaa 21954775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 226
Target Start/End: Complemental strand, 22176064 - 22176013
Alignment:
Q  176 taggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtat 226  Q
    |||||||||||| ||||||||| | |||||||||||||||||||||||||||    
T  22176064 taggcaagtgtaccaaatcgtttatcaagtaataaagtgataagtagagtat 22176013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 130
Target Start/End: Original strand, 35603330 - 35603453
Alignment:
Q  7 tttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgggttatt 106  Q
    |||| |||||||||||| ||| ||||| |||||||||| |||||||| || | | | | |||||||||||||  || ||||| |     ||  |||||||    
T  35603330 tttattcttatctatttgttacatgtgttatttgtattgaaaattgatggcattttggaaaagagaaaaagtcagcccaaaagagttggaagaggttatt 35603429  T
Q  107 ttctttatatatagtatagatata 130  Q
    ||||||||||||||||||||||||    
T  35603430 ttctttatatatagtatagatata 35603453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 37143524 - 37143587
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaa 68  Q
    |||||| |||||||||||| ||| ||||| |||||||||| ||||||||||||| | |||||||    
T  37143524 aatttattcttatctatttgttacatgtgttatttgtattgaaaattgaaggtatttttggaaa 37143587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 3774821 - 3774882
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    ||||||||||||||||||| ||| || |||||||||||||  |||||||||||||||||||||    
T  3774821 ttaggcaagtgtatcaaattgtttactaagtaataaagtgc-aagtagagtatcatatccaca 3774882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 232
Target Start/End: Original strand, 5679201 - 5679259
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatc 232  Q
    |||| |||||||| ||||||||| |||||||||||||||||| ||||||||||| ||||    
T  5679201 ttagacaagtgtaccaaatcgtttaccaagtaataaagtgattagtagagtatcgtatc 5679259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 19545458 - 19545396
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaa 67  Q
    ||||||||||||| ||||| |||||||||||||||| ||| ||  ||||||||||| ||||||    
T  19545458 aatttactcttatatatttcttatatgtgctatttgcattgaatgttgaaggtaattttggaa 19545396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 19636699 - 19636637
Alignment:
Q  164 tgatgtgcggtttaggcaagtgtatcaaatcgttaccaagtaataaagtgataagtagagtat 226  Q
    |||||||||  ||| | ||||||| ||||||||||| ||||||||||||| ||||||||||||    
T  19636699 tgatgtgcgaattaagaaagtgtaccaaatcgttacaaagtaataaagtggtaagtagagtat 19636637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 30859561 - 30859603
Alignment:
Q  2 ttgaatttactcttatctatttattatatgtgctatttgtatt 44  Q
    ||||||||||| |||||||||||||||||||||||||| ||||    
T  30859561 ttgaatttactattatctatttattatatgtgctatttatatt 30859603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 222
Target Start/End: Complemental strand, 1833697 - 1833648
Alignment:
Q  174 tttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtaga 222  Q
    |||||||||||  ||||||||||| |||||||||||||||||||||||||    
T  1833697 tttaggcaagtacatcaaatcgtttaccaagtaataaagtgataagtaga 1833648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 4609247 - 4609118
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgg 100  Q
    ||||||||||||||||||||||| |||||| || |||||| ||| ||   ||| ||| || || ||| |||||||||   |  ||||| |  |||||       
T  4609247 tttgaatttactcttatctatttgttatatatgatatttgaattgaatgatgatggtgattttcgaaggagaaaaagacagttcaaaagaatcaaaagat 4609148  T
Q  101 gttattttctttatatatagtatagatata 130  Q
    ||||||||||||||||||||||||||||||    
T  4609147 gttattttctttatatatagtatagatata 4609118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 5661968 - 5661919
Alignment:
Q  2 ttgaatttactcttatctatttattatatgtgctatttgtattaaaaatt 51  Q
    ||||||||| |||||||||||| ||| ||||| |||||||||||||||||    
T  5661968 ttgaatttattcttatctatttgttacatgtgttatttgtattaaaaatt 5661919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 209
Target Start/End: Original strand, 11935176 - 11935221
Alignment:
Q  164 tgatgtgcggtttaggcaagtgtatcaaatcgttaccaagtaataa 209  Q
    |||||||||| |||||| |||||| |||||||||||||||||||||    
T  11935176 tgatgtgcggattaggctagtgtaccaaatcgttaccaagtaataa 11935221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 236
Target Start/End: Complemental strand, 19929777 - 19929716
Alignment:
Q  176 taggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||||||||||| |||||| || ||||||||| |||||||||| ||||||||| ||||||||    
T  19929777 taggcaagtgtaccaaatcatttaccaagtaacaaagtgataaatagagtatcgtatccaca 19929716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 123
Target Start/End: Original strand, 48737632 - 48737748
Alignment:
Q  6 atttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgggttat 105  Q
    ||||| |||||||||||||||| ||||  |||||||||| |||||||| || | | ||  ||||||||||||| |   |||||||  | |||  ||||||    
T  48737632 atttattcttatctatttattacatgtattatttgtattgaaaattgagggcatttttaaaaagagaaaaagtcgattcaaaaaa-gctaaagaggttat 48737730  T
Q  106 tttctttatatatagtat 123  Q
    ||||||||||||||||||    
T  48737731 tttctttatatatagtat 48737748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 50412799 - 50412746
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggta 58  Q
    |||||| |||||||||||||||| ||||| |||||||||| |||||||| ||||    
T  50412799 aatttattcttatctatttattacatgtgttatttgtattgaaaattgagggta 50412746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 17951399 - 17951339
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatcca 234  Q
    |||| |||||||| ||||||||| |||||||| |||||||||||||| |||||| ||||||    
T  17951399 ttagacaagtgtaccaaatcgtttaccaagtactaaagtgataagtaaagtatcgtatcca 17951339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 17955251 - 17955191
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatcca 234  Q
    |||| |||||||| ||||||||| |||||||| |||||||||||||| |||||| ||||||    
T  17955251 ttagacaagtgtaccaaatcgtttaccaagtactaaagtgataagtaaagtatcgtatcca 17955191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 32006980 - 32007032
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattga 53  Q
    ||||||||||||||||||||||| |||||| || |||||||||| ||| ||||    
T  32006980 tttgaatttactcttatctatttgttatatatgttatttgtatttaaagttga 32007032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 34334809 - 34334757
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattga 53  Q
    |||||||||||| ||||||||||||||||| || |||||||||| ||| ||||    
T  34334809 tttgaatttacttttatctatttattatatttgttatttgtatttaaagttga 34334757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 43491346 - 43491282
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaag 69  Q
    |||||| |||||||||||||||| ||||| |||||||||| |||| ||| |||| | ||||||||    
T  43491346 aatttattcttatctatttattacatgtgttatttgtattgaaaaatgagggtatttttggaaag 43491282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 225
Target Start/End: Complemental strand, 9737612 - 9737561
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagta 225  Q
    ||||||||||||| ||||||||| |||||||||||||||||| |||| ||||    
T  9737612 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgatcagtaaagta 9737561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 20702139 - 20702108
Alignment:
Q  99 gggttattttctttatatatagtatagatata 130  Q
    ||||||||||||||||||||||||||||||||    
T  20702139 gggttattttctttatatatagtatagatata 20702108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 20829841 - 20829798
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataa 217  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  20829841 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataa 20829798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 21020676 - 21020723
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattg 52  Q
    |||||| |||||||||||| ||| ||||| ||||||||||||||||||    
T  21020676 aatttattcttatctatttgttacatgtgttatttgtattaaaaattg 21020723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 53
Target Start/End: Original strand, 31691082 - 31691129
Alignment:
Q  6 atttactcttatctatttattatatgtgctatttgtattaaaaattga 53  Q
    ||||| |||||||| ||||||||||||| ||||||||| |||||||||    
T  31691082 atttattcttatctttttattatatgtgttatttgtatgaaaaattga 31691129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 40314820 - 40314867
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattg 52  Q
    |||||| |||||||||||| ||||||||| |||||||||| |||||||    
T  40314820 aatttattcttatctatttgttatatgtgttatttgtattgaaaattg 40314867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 40324896 - 40324943
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattg 52  Q
    |||||| |||||||||||| ||||||||| |||||||||| |||||||    
T  40324896 aatttattcttatctatttgttatatgtgttatttgtattgaaaattg 40324943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 10250396 - 10250346
Alignment:
Q  28 tatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagt 78  Q
    |||||| |||||||||| ||| |||| |||||| |||||||||||||||||    
T  10250396 tatgtgttatttgtattgaaagttgatggtaattttggaaagagaaaaagt 10250346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 219
Target Start/End: Original strand, 10589719 - 10589753
Alignment:
Q  185 gtatcaaatcgttaccaagtaataaagtgataagt 219  Q
    |||||||||| ||||||||||||||||||||||||    
T  10589719 gtatcaaatccttaccaagtaataaagtgataagt 10589753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 236
Target Start/End: Complemental strand, 11700672 - 11700610
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||| |||||||| ||||| ||| ||||||||||||| |||||| ||||||||| ||||||||    
T  11700672 ttagacaagtgtaccaaattgtttaccaagtaataaaatgataaatagagtatcgtatccaca 11700610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 232
Target Start/End: Original strand, 15047124 - 15047182
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatc 232  Q
    ||||| ||||||  ||||||||| |||||||||||||||||||||||||| ||| ||||    
T  15047124 ttaggaaagtgttccaaatcgtttaccaagtaataaagtgataagtagaggatcgtatc 15047182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 232
Target Start/End: Complemental strand, 15107300 - 15107242
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatc 232  Q
    ||||| ||||||  ||||||||| |||||||||||||||||||||||||| ||| ||||    
T  15107300 ttaggaaagtgttccaaatcgtttaccaagtaataaagtgataagtagaggatcgtatc 15107242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 232
Target Start/End: Original strand, 19882636 - 19882694
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatc 232  Q
    |||||||||||||  |||||||| | |||||||||||||||| ||||||||||| ||||    
T  19882636 ttaggcaagtgtacaaaatcgtttatcaagtaataaagtgattagtagagtatcgtatc 19882694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 236
Target Start/End: Complemental strand, 21323978 - 21323916
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||||||||||||  |||||||| ||||| |||||| ||||| ||||||||||| ||||||||    
T  21323978 ttaggcaagtgtactaaatcgtttaccaaataataatgtgatcagtagagtatcgtatccaca 21323916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 34659124 - 34659082
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtat 43  Q
    ||||||||||| ||||||||||| ||||||||| |||||||||    
T  34659124 tttgaatttacacttatctatttgttatatgtgttatttgtat 34659082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 12214765 - 12214830
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaaga 70  Q
    |||||| |||||||||||| ||| ||||| |||||||| | |||||||| |||| | |||||||||    
T  12214765 aatttattcttatctatttgttacatgtgttatttgtactgaaaattgagggtatttttggaaaga 12214830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 222
Target Start/End: Complemental strand, 15050186 - 15050138
Alignment:
Q  174 tttaggcaagtgtatcaaatc-gttaccaagtaataaagtgataagtaga 222  Q
    |||||||||||||||||||||  |||||||||||||||||| ||||||||    
T  15050186 tttaggcaagtgtatcaaatcatttaccaagtaataaagtg-taagtaga 15050138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 222
Target Start/End: Original strand, 15104238 - 15104286
Alignment:
Q  174 tttaggcaagtgtatcaaatc-gttaccaagtaataaagtgataagtaga 222  Q
    |||||||||||||||||||||  |||||||||||||||||| ||||||||    
T  15104238 tttaggcaagtgtatcaaatcatttaccaagtaataaagtg-taagtaga 15104286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 17337223 - 17337178
Alignment:
Q  189 caaatcgttaccaagtaataaagtgataagtagagtatcatatcca 234  Q
    |||||| ||||| |||||||| ||||||||||||||||| ||||||    
T  17337223 caaatcattaccgagtaataacgtgataagtagagtatcgtatcca 17337178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 175 - 227
Target Start/End: Original strand, 19092291 - 19092344
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatc 227  Q
    ||||||||||||| ||||| ||| | ||||||||||||||||||| ||||||||    
T  19092291 ttaggcaagtgtaccaaattgtttatcaagtaataaagtgataagaagagtatc 19092344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 22526369 - 22526422
Alignment:
Q  184 tgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||| ||||||||| | ||| |||||||||||||||||||||||| ||||||||    
T  22526369 tgtaccaaatcgtttatcaaataataaagtgataagtagagtatcgtatccaca 22526422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 124
Target Start/End: Complemental strand, 29656458 - 29656369
Alignment:
Q  35 tatttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgggttattttctttatatatagtata 124  Q
    ||||| |||| |||||||| || | | |||||||||||||||||  || ||||| | |  |||  |||||||||||||||||||||||||    
T  29656458 tatttttattgaaaattgagggcagttttggaaagagaaaaagtcagcccaaaagagctgaaagaggttattttctttatatatagtata 29656369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 43317486 - 43317433
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggta 58  Q
    |||||| |||||||||||| ||| ||||| |||||||||| |||||||| ||||    
T  43317486 aatttattcttatctatttgttacatgtgttatttgtattgaaaattgagggta 43317433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 4589813 - 4589765
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattga 53  Q
    |||||| |||||||||||| ||| ||||| |||||||||| ||||||||    
T  4589813 aatttattcttatctatttgttacatgtgttatttgtattgaaaattga 4589765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 233
Target Start/End: Original strand, 9052657 - 9052728
Alignment:
Q  162 actgatgtgcggtttaggcaagtgtatcaaatc-gttaccaagtaataaagtgataagtagagtatcatatcc 233  Q
    |||||||  ||| ||||||||||||| ||||||  ||||||||||||||| || ||||||||||||| |||||    
T  9052657 actgatggtcggattaggcaagtgtaccaaatcatttaccaagtaataaaatg-taagtagagtatcgtatcc 9052728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 158
Target Start/End: Complemental strand, 9828550 - 9828518
Alignment:
Q  126 atataaaggaccaagtttgattgaaaaaggtta 158  Q
    ||||||||||||||||||||||| |||||||||    
T  9828550 atataaaggaccaagtttgattgcaaaaggtta 9828518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 129
Target Start/End: Complemental strand, 10249110 - 10249082
Alignment:
Q  101 gttattttctttatatatagtatagatat 129  Q
    |||||||||||||||||||||||||||||    
T  10249110 gttattttctttatatatagtatagatat 10249082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 236
Target Start/End: Complemental strand, 11521288 - 11521232
Alignment:
Q  181 aagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    ||||||| ||||||||| | ||| |||||||||||||||||||||||| ||| ||||    
T  11521288 aagtgtaccaaatcgtttatcaaataataaagtgataagtagagtatcgtatacaca 11521232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 12114912 - 12114840
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaag 77  Q
    |||||| |||||||||||| ||| ||||| |||| ||||| ||||||||| ||| | ||  ||||||||||||    
T  12114912 aatttattcttatctatttgttacatgtgttattcgtattgaaaattgaaagtattttttaaaagagaaaaag 12114840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 13265434 - 13265386
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattga 53  Q
    |||||| |||||||||||| ||| || || |||||||||||||||||||    
T  13265434 aatttattcttatctatttgttacatatgttatttgtattaaaaattga 13265386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 222
Target Start/End: Complemental strand, 13787244 - 13787192
Alignment:
Q  171 cggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtaga 222  Q
    |||||||| |||||||||| ||| ||| || ||||||||||||||||||||||    
T  13787244 cggtttagacaagtgtatcgaatggtttactaagtaataaagtgataagtaga 13787192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 23431993 - 23432041
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattga 53  Q
    |||||| |||||||||||||| | ||||| |||||||||| ||||||||    
T  23431993 aatttattcttatctatttatgacatgtgttatttgtattgaaaattga 23432041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 76
Target Start/End: Original strand, 27376532 - 27376604
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtatt-aaaaattgaaggtaatcttggaaagagaaaaa 76  Q
    |||||| ||| |||||||||||| ||||| ||||| |||| ||||||||| |||| | |||||| ||||||||    
T  27376532 aatttattctaatctatttattacatgtgttatttttattgaaaaattgagggtatttttggaacgagaaaaa 27376604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 48508958 - 48509006
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattga 53  Q
    |||||| |||||||||||| ||| ||||| ||||| |||||||||||||    
T  48508958 aatttattcttatctatttgttacatgtgttatttatattaaaaattga 48509006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 175 - 238
Target Start/End: Complemental strand, 168401 - 168337
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagg 238  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  168401 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacagg 168337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 32822 - 32897
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaa 76  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||| |||| |||||| || ||||||| ||||    
T  32822 tttgaatttactcttatctatttattatatgtgttatttgtattgaaagttgatggtaattttagaaagagtaaaa 32897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 169 - 236
Target Start/End: Original strand, 69072 - 69139
Alignment:
Q  169 tgcggtttaggcaagtgtatcaaatcgttaccaagtaataaagtgataagtagagtatcatatccaca 236  Q
    ||||| ||||||||||||| |||||| |||||||||||||||||||||||| ||| ||| ||||||||    
T  69072 tgcggattaggcaagtgtaccaaatcattaccaagtaataaagtgataagttgagaatcgtatccaca 69139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0638 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0638
Description:

Target: scaffold0638; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 181 - 234
Target Start/End: Complemental strand, 919 - 866
Alignment:
Q  181 aagtgtatcaaatcgttaccaagtaataaagtgataagtagagtatcatatcca 234  Q
    |||||||  |||||||||||||||||||||||||||||||||||||| ||||||    
T  919 aagtgtactaaatcgttaccaagtaataaagtgataagtagagtatcgtatcca 866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 43321 - 43450
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgg 100  Q
    ||||||||||||||||| ||||| ||||||| | |||||| ||| ||| || | |||||| |||||||| ||||||||  |  ||||| |  ||||||      
T  43321 tttgaatttactcttatttatttgttatatgcgttatttgcattgaaagtttatggtaattttggaaagggaaaaagtcagtgcaaaagagacaaaacat 43420  T
Q  101 gttattttctttatatatagtatagatata 130  Q
      ||||||||||||||||||||||||||||    
T  43421 tctattttctttatatatagtatagatata 43450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 175 - 226
Target Start/End: Original strand, 724 - 776
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtat 226  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  724 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtat 776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 175 - 238
Target Start/End: Original strand, 54856 - 54920
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagg 238  Q
    ||||| ||||||| ||||||||| |||||||||||||||||||||||||||||  ||||||||||    
T  54856 ttaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtattgtatccacagg 54920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 178 - 232
Target Start/End: Complemental strand, 48290 - 48235
Alignment:
Q  178 ggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatc 232  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  48290 ggcaaatgtatcaaatcgtttaccaagtaataaagtgataagtagagtatcgtatc 48235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 236
Target Start/End: Complemental strand, 15585 - 15506
Alignment:
Q  158 aacaactgatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||| ||||||  ||| |||||||||||||||||||| || ||||||||||||||| ||| |||||||||| ||||||||    
T  15585 aacacctgatggtcggattaggcaagtgtatcaaatcatttaccaagtaataaagtaatatgtagagtatcgtatccaca 15506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 6283 - 6345
Alignment:
Q  175 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    ||||||||||||||||||||||| || |||||||||||| ||||||| |||||| ||||||||    
T  6283 ttaggcaagtgtatcaaatcgtttacgaagtaataaagtcataagtaaagtatcgtatccaca 6345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 76
Target Start/End: Complemental strand, 14432 - 14370
Alignment:
Q  14 ttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaa 76  Q
    |||||||||| | ||||||| |||||||||||||| |||| |||||| |||||||||||||||    
T  14432 ttatctatttgtcatatgtgttatttgtattaaaagttgagggtaattttggaaagagaaaaa 14370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 175 - 232
Target Start/End: Complemental strand, 89956 - 89899
Alignment:
Q  175 ttaggcaagtgtatcaaatcg-ttaccaagtaataaagtgataagtagagtatcatatc 232  Q
    |||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  89956 ttagacaagtgtatcaaatcgtttaccaagtaataaagtg-taagtagagtatcatatc 89899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 201 - 238
Target Start/End: Original strand, 21299 - 21336
Alignment:
Q  201 aagtaataaagtgataagtagagtatcatatccacagg 238  Q
    ||||||||||||||||||||||||||||||||||||||    
T  21299 aagtaataaagtgataagtagagtatcatatccacagg 21336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0672 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0672
Description:

Target: scaffold0672; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 196 - 238
Target Start/End: Original strand, 1752 - 1794
Alignment:
Q  196 ttaccaagtaataaagtgataagtagagtatcatatccacagg 238  Q
    ||||||||||| |||||||||||||||||||| ||||||||||    
T  1752 ttaccaagtaaaaaagtgataagtagagtatcgtatccacagg 1794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 198 - 236
Target Start/End: Original strand, 3551 - 3589
Alignment:
Q  198 accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  3551 accaagtaataaagtgataagtagagtatcgtatccaca 3589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 101383 - 101253
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgg 100  Q
    |||||||||||| |||||||||| ||||||||| |||||||||| | | ||||  ||||| ||||||  | |||||||  ||  |||| ||| ||||  |    
T  101383 tttgaatttactattatctatttgttatatgtgttatttgtattgatagttgagagtaattttggaagaaaaaaaagtcagcctaaaagatctaaaagag 101284  T
Q  101 gttattttctttatatatagtatagatataa 131  Q
    | ||||||  |||||||||| ||||||||||    
T  101283 gctatttttgttatatatagcatagatataa 101253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 130
Target Start/End: Original strand, 41739 - 41864
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgggtta 104  Q
    |||||| |||||||||||| ||||||||| ||||||||| ||||||||| || ||| ||  ||| |||||||||| || ||||| |   ||||  |||      
T  41739 aatttattcttatctatttgttatatgtgttatttgtataaaaaattgagggcaatttt--aaaaagaaaaagttagcccaaaagaattaaaagaggtag 41836  T
Q  105 ttttctt--tatatatagtatagatata 130  Q
    |||||||  |||||||||||||||||||    
T  41837 ttttctttatatatatagtatagatata 41864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0957 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0957
Description:

Target: scaffold0957; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 236
Target Start/End: Original strand, 3138 - 3210
Alignment:
Q  164 tgatgtgcggtttaggcaagtgtatcaaatcg-ttaccaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||||||||| |||||||||||||  |||| | |||||||||||||||||| || |||||||||| ||||||||    
T  3138 tgatgtgcggattaggcaagtgtacaaaattgtttaccaagtaataaagtg-tatgtagagtatcgtatccaca 3210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0838 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0838
Description:

Target: scaffold0838; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 2371 - 2428
Alignment:
Q  180 caagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||||||| ||||||||| ||||| |||||||| ||||||||||||||| ||||||||    
T  2371 caagtgtaccaaatcgtttaccaaataataaagggataagtagagtatcgtatccaca 2428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0832 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0832
Description:

Target: scaffold0832; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 2402 - 2459
Alignment:
Q  180 caagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||||||| ||||||||| ||||| |||||||| ||||||||||||||| ||||||||    
T  2402 caagtgtaccaaatcgtttaccaaataataaagggataagtagagtatcgtatccaca 2459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 21711 - 21835
Alignment:
Q  1 tttgaatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaa-agagaaaaagttggcacaaaaaatccaaaacg 99  Q
    ||||||||||||||||| |||||||  |||||| |||||||||| |||||| || ||||| |||||| ||||||||||   ||  |||| |  ||||||     
T  21711 tttgaatttactcttatttatttat--tatgtgttatttgtattgaaaattaaatgtaat-ttggaagagagaaaaagacagccaaaaagaggcaaaacc 21807  T
Q  100 ggttattttctttatatatagtatagata 128  Q
     ||| ||||||||||||||||||||||||    
T  21808 tgtt-ttttctttatatatagtatagata 21835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 119
Target Start/End: Complemental strand, 32441 - 32336
Alignment:
Q  14 ttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgggttattttcttta 113  Q
    |||| ||||||||| |||||||| ||||||| ||||||||||||| | ||| ||||||||| |||   | ||||| | |  ||| | |||||||||||||    
T  32441 ttatttatttattacatgtgctagttgtattgaaaattgaaggtatttttgaaaagagaaagagtcaactcaaaagaacttaaatgagttattttcttta 32342  T
Q  114 tatata 119  Q
    ||||||    
T  32341 tatata 32336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1869 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1869
Description:

Target: scaffold1869; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 238
Target Start/End: Complemental strand, 488 - 428
Alignment:
Q  179 gcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagg 238  Q
    |||||||||||| |||||| || |||||||||||||||| |||||||||| |||| |||||    
T  488 gcaagtgtatcatatcgtttacaaagtaataaagtgatacgtagagtatcgtatcaacagg 428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 4221 - 4269
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattga 53  Q
    |||||| |||||||||||| ||||||||| |||||||||| ||||||||    
T  4221 aatttattcttatctatttgttatatgtgttatttgtattgaaaattga 4269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 236
Target Start/End: Complemental strand, 36076 - 36036
Alignment:
Q  196 ttaccaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||| ||||||||||||||||||||||||||| ||||||||    
T  36076 ttactaagtaataaagtgataagtagagtatcgtatccaca 36036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 236
Target Start/End: Original strand, 39602 - 39642
Alignment:
Q  196 ttaccaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||||||||||||||||||||||||||| ||| ||||||||    
T  39602 ttaccaagtaataaagtgataagtagagcatcgtatccaca 39642  T

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Target: scaffold0002 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 151253 - 151222
Alignment:
Q  99 gggttattttctttatatatagtatagatata 130  Q
    ||||||||||||||||||||||||||||||||    
T  151253 gggttattttctttatatatagtatagatata 151222  T

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Target: scaffold0002; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 76
Target Start/End: Complemental strand, 151329 - 151265
Alignment:
Q  12 tcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaa 76  Q
    |||||||||||| ||||||||| || ||||||| ||||||||  |||   |||||||||||||||    
T  151329 tcttatctatttgttatatgtgttaattgtattgaaaattgagagtatatttggaaagagaaaaa 151265  T

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Target: scaffold0712 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 119
Target Start/End: Complemental strand, 5688 - 5574
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgggtta 104  Q
    |||||| |||||| ||||| ||| ||||| ||||| |||| ||||||||||  | | ||| |||||||||||||||| | |||||| | |||| | |||     
T  5688 aatttattcttatttatttgttacatgtgttatttatattgaaaattgaagacatttttgaaaagagaaaaagttggtaaaaaaaaccgaaaaagagttg 5589  T
Q  105 ttttctttatatata 119  Q
    |||| | ||||||||    
T  5588 ttttatatatatata 5574  T

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Target: scaffold0709 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 119
Target Start/End: Complemental strand, 5706 - 5592
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgggtta 104  Q
    |||||| |||||| ||||| ||| ||||| ||||| |||| ||||||||||  | | ||| |||||||||||||||| | |||||| | |||| | |||     
T  5706 aatttattcttatttatttgttacatgtgttatttatattgaaaattgaagacatttttgaaaagagaaaaagttggtaaaaaaaaccgaaaaagagttg 5607  T
Q  105 ttttctttatatata 119  Q
    |||| | ||||||||    
T  5606 ttttatatatatata 5592  T

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Target: scaffold0143 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 5943 - 5989
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaatt 51  Q
    |||||| |||||||||||||||| ||||| |||||||||| ||||||    
T  5943 aatttattcttatctatttattacatgtgttatttgtattgaaaatt 5989  T

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Target: scaffold0054 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 226
Target Start/End: Original strand, 72074 - 72120
Alignment:
Q  181 aagtgtatcaaatcgtta-ccaagtaataaagtgataagtagagtat 226  Q
    ||||||| ||||| |||| ||||||||||||||||||||||||||||    
T  72074 aagtgtaccaaattgttaaccaagtaataaagtgataagtagagtat 72120  T

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Target: scaffold0543 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 5140 - 5067
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagt 78  Q
    |||||| |||||||||||| |||  |||| |||||||||| ||||||||  ||| | ||| |||||||||||||    
T  5140 aatttattcttatctattttttacgtgtgttatttgtattgaaaattgagagtatttttgaaaagagaaaaagt 5067  T

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Target: scaffold0526 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0526
Description:

Target: scaffold0526; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 9435 - 9508
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagt 78  Q
    |||||||| |||||||||| ||||||| ||| |||||||| ||| || |  ||||| || ||||||||||||||    
T  9435 aatttacttttatctatttgttatatgcgctgtttgtattgaaagttaagagtaattttagaaagagaaaaagt 9508  T

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Target: scaffold0492 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 6686 - 6613
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattgaaggtaatcttggaaagagaaaaagt 78  Q
    |||||| |||||||||||| |||  |||| |||||||||| ||||||||  ||| | ||| |||||||||||||    
T  6686 aatttattcttatctattttttacgtgtgttatttgtattgaaaattgagagtatttttgaaaagagaaaaagt 6613  T

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Target: scaffold0394 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 222
Target Start/End: Complemental strand, 14011 - 13963
Alignment:
Q  174 tttaggcaagtgtatcaaatcg-ttaccaagtaataaagtgataagtaga 222  Q
    |||||||||||||||||||||| |||||||||||| ||||| ||||||||    
T  14011 tttaggcaagtgtatcaaatcgtttaccaagtaattaagtg-taagtaga 13963  T

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Target: scaffold0102 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 236
Target Start/End: Original strand, 35522 - 35595
Alignment:
Q  164 tgatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    |||||||| | ||| |||| |||||| ||||||| | |||||||||||||||||| ||||||||  ||||||||    
T  35522 tgatgtgcagattatgcaaatgtatctaatcgtttatcaagtaataaagtgataaatagagtattgtatccaca 35595  T

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Target: scaffold1578 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1578
Description:

Target: scaffold1578; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 1427 - 1379
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattga 53  Q
    |||||| |||||||||||| ||| ||||| |||||||||| ||||||||    
T  1427 aatttattcttatctatttgttacatgtgttatttgtattgaaaattga 1379  T

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Target: scaffold0620 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0620
Description:

Target: scaffold0620; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 216
Target Start/End: Complemental strand, 7697 - 7661
Alignment:
Q  181 aagtgtatcaaatcgtt-accaagtaataaagtgata 216  Q
    ||||||||||||||||| |||||||||||||||||||    
T  7697 aagtgtatcaaatcgtttaccaagtaataaagtgata 7661  T

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Target: scaffold0035 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 236
Target Start/End: Original strand, 69911 - 69971
Alignment:
Q  177 aggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 236  Q
    ||||||||||| |||||| || ||||||||||||||||| ||||| |||||| ||| ||||    
T  69911 aggcaagtgtaccaaatcatttaccaagtaataaagtgacaagtaaagtatcgtatacaca 69971  T

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Target: scaffold0019 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 232
Target Start/End: Original strand, 11266 - 11294
Alignment:
Q  204 taataaagtgataagtagagtatcatatc 232  Q
    |||||||||||||||||||||||||||||    
T  11266 taataaagtgataagtagagtatcatatc 11294  T

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Target: scaffold0014 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 21304 - 21352
Alignment:
Q  5 aatttactcttatctatttattatatgtgctatttgtattaaaaattga 53  Q
    |||||| |||||||||||| ||| ||||| |||||||||| ||||||||    
T  21304 aatttattcttatctatttgttacatgtgttatttgtattgaaaattga 21352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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