View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2367_low_11 (Length: 222)
Name: NF2367_low_11
Description: NF2367
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2367_low_11 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 6267155 - 6266934
Alignment:
| Q |
1 |
ttgcctccatcatctggtgctgctgttttaccacctaccacttcttctcagtccaatcaaacaactaattcaccacctccctcagttcctcctctgtcga |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6267155 |
ttgcctccatcatctggtgctgctgttttaccacctaccacttcttctcagtccaatcaaacaactaattcaccacctccctcagttcctcctctgtcga |
6267056 |
T |
|
| Q |
101 |
cgacagtgccagtaactcctcctccttcaccatctctttctcctcctccaccgtcgactacaccgccgccaacatctccaccaccagcatcatcacctcc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6267055 |
cgacagtgccagtaactcctcctccttcaccatctctttctcctcctccaccgtcgactacaccgccgccaacatctccaccaccagcatcatcacctcc |
6266956 |
T |
|
| Q |
201 |
accaattgtaacatcaccgcct |
222 |
Q |
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|||||||||||||||||||||| |
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| T |
6266955 |
accaattgtaacatcaccgcct |
6266934 |
T |
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