View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2369_high_11 (Length: 320)
Name: NF2369_high_11
Description: NF2369
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2369_high_11 |
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Alignment Details
Target: chr8 (Bit Score: 276; Significance: 1e-154; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 1 - 305
Target Start/End: Original strand, 33901793 - 33902093
Alignment:
| Q |
1 |
gcattagaaagtgcacacaaggtgagtaaataacattggcaattgcatgcatccattgttctctcaacttgccatttcaagagtaggaaactatataact |
100 |
Q |
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| T |
33901793 |
gcattagaaagtgcacacaaggtgagtaaataacattggcaattgcatgcatccattgttctctcaacttgccatttcaacagtaggaaacta----act |
33901888 |
T |
|
| Q |
101 |
tgttacttacaatttttcaggtgaattgcattgtgttcgataagacaggaactctcactattggaaagccagtggttgtaactgcaaaactcttcaagaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |
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| T |
33901889 |
tgttacttacaatttttcaggtgaattgcattgtgttcgataagacaggaactctcactattgggaagccagtggttgtaactacaaaactcttcaagaa |
33901988 |
T |
|
| Q |
201 |
tatgccagttaaagatttctatgaacttgttgctgcagcagaggcaaggcttcttctacttttaatattcttctactaaatcaatggtctattcatagtt |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33901989 |
tatgccagttaaagatttctatgaacttgttgctgcagcagaggcaaggcttcttctacttttaatattcttctactaaatcaatggtctattcatagtt |
33902088 |
T |
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| Q |
301 |
gtaac |
305 |
Q |
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||||| |
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| T |
33902089 |
gtaac |
33902093 |
T |
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