View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2369_high_3 (Length: 567)
Name: NF2369_high_3
Description: NF2369
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2369_high_3 |
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Alignment Details
Target: chr7 (Bit Score: 526; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 526; E-Value: 0
Query Start/End: Original strand, 17 - 562
Target Start/End: Complemental strand, 35272361 - 35271816
Alignment:
| Q |
17 |
agtcaggtcctatgaattaggataaaccaataaagtgatataccaacaaggcaggtgtgttcctatggatttgtttttatctttatacctgaataaaagc |
116 |
Q |
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| T |
35272361 |
agtcaggtcctatgaattaggataaaccaataaagtgatataccaacaaggcaggtgtgttcctatggatttgtttttatctttatacctgaataaaagc |
35272262 |
T |
|
| Q |
117 |
aaggcaggtccatcccaagcttccatctggcctttgtagtagtcatagaagtcaatcgcctaagaaatgaaaaggtaataagatttcagattgtaagaaa |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35272261 |
aaggcaggtccatcccaagcttccatctggcctttgtagtagtcatagaagtcaatcgcctaagaaatgaaaaggtaataagatttcagattgtaagaaa |
35272162 |
T |
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| Q |
217 |
tgaaaagatacaataaaagaccagagatttcatttctttccataatgagtgttcttaatgatcataactttgcataacaagcatgaagaatgaggatctt |
316 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
35272161 |
tgaaaagatacaataaaagaccagagatttcatttctttccataatgagtgttcttaatgatcataactttgcataacaagcatgaagaatgagggtctt |
35272062 |
T |
|
| Q |
317 |
taataaccctattcagctgccctcatatcactctgccatctctgacaagtggcccttttccagcaaatgaccaacttttaacaaattgcatgtcttggat |
416 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35272061 |
taataaccctattcagctgccctcatatcactctgccatctctgacaagtggcccttttccagcaaatgaccaacttttaacaaattgcatgtcttggat |
35271962 |
T |
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| Q |
417 |
gatcaacctattctctacctcctttcctttttccgttctcctattttaaaaaccttgctttgtctcacctgttctgttctttacacctttgtcaatctct |
516 |
Q |
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||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35271961 |
gatcagcctattctcttcctcctttcctttttccgttctcctattttaaaaaccttgctttgtctcacctgttctgttctttacacctttgtcaatctct |
35271862 |
T |
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| Q |
517 |
atttccttcacatctttttcctaattctttctttccctttgcttct |
562 |
Q |
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|||||||||||||||||||||||||||||||||||| |||| |||| |
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| T |
35271861 |
atttccttcacatctttttcctaattctttctttccttttgattct |
35271816 |
T |
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