View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2369_low_14 (Length: 293)
Name: NF2369_low_14
Description: NF2369
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2369_low_14 |
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Alignment Details
Target: chr8 (Bit Score: 157; Significance: 2e-83; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 10253688 - 10253444
Alignment:
| Q |
1 |
aatagctctcactacaaaaataatgtgtatttcctaacaattttattgacaggtccaaccctgtcgacattaaaataaaataaaaactcctttacgatcg |
100 |
Q |
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| T |
10253688 |
aatagctctcactacaaaaataatgtgtatttcctaactattttattgacaggtccaaccctgtagacattaaaaaaaaa-----actcctttacgatca |
10253594 |
T |
|
| Q |
101 |
atca----tctctcagaagaaatgaaaatttgtcctgtggggttttcaacaacaactgccatgcccgataaaattcgggtaacgaataannnnnnnnatt |
196 |
Q |
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|||| ||||| |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| ||| |
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| T |
10253593 |
atcaatcatctcttagaacaaatgaaaatttgtcctgtggggttttcaacaacaaccgccatgcccgataaaattagggtaacgaataattttttctatt |
10253494 |
T |
|
| Q |
197 |
aaaattttaagggaacctaatgtgtggaaactaaaaattcatattgtgaa |
246 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10253493 |
aaaattttaagggaacctaatgtgtggaaactaaaaattcatattgtgaa |
10253444 |
T |
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