View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2369_low_15 (Length: 293)
Name: NF2369_low_15
Description: NF2369
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2369_low_15 |
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Alignment Details
Target: chr1 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 15 - 278
Target Start/End: Complemental strand, 35047975 - 35047712
Alignment:
| Q |
15 |
agttgagacctttatggatgtctaagaatggtcatcattttcaactaaatgtgagtctcactactcaaatttctgtctattatttgattcatgaagagaa |
114 |
Q |
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| T |
35047975 |
agttgagacctttatggatgtctaagaatggtcatcattttcaactaaatgtgagtttcactactcaaatttatgtctattatttgatccatgaagagaa |
35047876 |
T |
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| Q |
115 |
aaaacttcttagagtagttagtgtaaggagaatcgcttgagttgttatttgtgtttcttctttggtcgtaatcctccggttcctaagagaaatgaacatt |
214 |
Q |
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||||||||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35047875 |
aaaacttcttagagtagttagtgtaaggaaaattgtttgagttgttatttgtgtttcttctttggtcgtaatcctccggttcctaagagaaatgaacatt |
35047776 |
T |
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| Q |
215 |
gacaatctgaagttcccctgagaggtaagtaaagtccgatcaaggattctttcagtcaagattc |
278 |
Q |
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||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35047775 |
gacaatctgaagttcgcctgagaggtaagtaaagtccgatcaaggattctttcagtcaagattc |
35047712 |
T |
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