View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2369_low_16 (Length: 258)
Name: NF2369_low_16
Description: NF2369
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2369_low_16 |
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Alignment Details
Target: chr2 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 20 - 242
Target Start/End: Complemental strand, 43763874 - 43763652
Alignment:
| Q |
20 |
ttcaagttcatctccttcaaattcatctattgatttggatttagctggacctgaatactcactgctaatttcctccacacgctcacctcctattgtactc |
119 |
Q |
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| T |
43763874 |
ttcaagttcatctccttcatattcatctattgatttggatttagctggacctgaatactcactgctaatttcctccacacgctcacctcctattgtactc |
43763775 |
T |
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| Q |
120 |
ccttcctccccttcttccacctccatgttactaatactccctccttcaccgtccgccgccgcaccgccaccatgccgaaaaatccccgcctgatttgagc |
219 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
43763774 |
ccttcctccccttcttccacctccatgttactaatactccctccttcaccctccgccgccgcaccgccaccatgccgaaatatccccgcctgatttgagc |
43763675 |
T |
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| Q |
220 |
aaagaaaatatgttagaacttaa |
242 |
Q |
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||||||||||||||||||||||| |
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| T |
43763674 |
aaagaaaatatgttagaacttaa |
43763652 |
T |
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