View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2370_low_2 (Length: 235)
Name: NF2370_low_2
Description: NF2370
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2370_low_2 |
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Alignment Details
Target: chr3 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 12 - 213
Target Start/End: Complemental strand, 32267852 - 32267651
Alignment:
| Q |
12 |
gtgagatgaatgacatggacgcataaagggcttttttgtgttgggttacaaacctctaacaaaccgatcatgctatgcacgttgttatcattgtgcatgc |
111 |
Q |
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| T |
32267852 |
gtgagatgaatgacatggacgcataaagggcttttttgtgttgggttacaaacctctaacaaaccgatcatgctatgcacgttgttatcattgtgcatgc |
32267753 |
T |
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| Q |
112 |
aacaaataatgttgaactctgaattttcaggagtgttttggatcgtcctcactcccccgtcatgtatacttcttaccattgtcacgcgagagccatgctt |
211 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32267752 |
aacaaataatgttgaactctgaattttcaggagtgttttggatcgtcctcactcccccgtcatgtatacttcttaccattgtcacgcgagagccatgctt |
32267653 |
T |
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| Q |
212 |
at |
213 |
Q |
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|| |
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| T |
32267652 |
at |
32267651 |
T |
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